Query 034410
Match_columns 95
No_of_seqs 146 out of 1507
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 03:26:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034410.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034410hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3acd_A Hypoxanthine-guanine ph 100.0 8.6E-36 2.9E-40 211.9 8.9 87 1-92 93-179 (181)
2 2ywu_A Hypoxanthine-guanine ph 100.0 1.8E-32 6.1E-37 194.2 8.9 88 1-93 93-180 (181)
3 3o7m_A Hypoxanthine phosphorib 100.0 1.4E-32 5E-37 195.7 8.3 90 1-95 92-182 (186)
4 3ozf_A Hypoxanthine-guanine-xa 100.0 2.6E-32 8.8E-37 202.8 7.3 88 2-94 155-242 (250)
5 3ohp_A Hypoxanthine phosphorib 100.0 1E-31 3.5E-36 189.7 8.0 87 1-92 89-175 (177)
6 3hvu_A Hypoxanthine phosphorib 100.0 9.6E-32 3.3E-36 194.3 7.8 90 1-95 114-203 (204)
7 1hgx_A HGXPRTASE, hypoxanthine 100.0 1.9E-29 6.5E-34 177.0 9.4 90 1-95 93-183 (183)
8 2geb_A Hypoxanthine-guanine ph 100.0 2.1E-29 7E-34 177.5 9.0 90 1-95 96-185 (185)
9 1pzm_A HGPRT, hypoxanthine-gua 100.0 1.9E-29 6.3E-34 181.8 8.9 90 1-95 116-205 (211)
10 1tc1_A Protein (hypoxanthine p 100.0 5E-29 1.7E-33 181.1 9.9 90 1-95 101-190 (220)
11 1fsg_A HGPRTASE, hypoxanthine- 100.0 2.8E-29 9.7E-34 183.3 7.8 89 1-94 140-228 (233)
12 2jbh_A Phosphoribosyltransfera 100.0 2.4E-29 8.1E-34 182.5 6.2 89 1-94 132-220 (225)
13 1yfz_A Hypoxanthine-guanine ph 100.0 7E-29 2.4E-33 177.1 7.7 89 1-94 116-204 (205)
14 1z7g_A HGPRT, HGPRTASE, hypoxa 99.9 2.4E-28 8.1E-33 176.6 7.2 87 2-93 125-211 (217)
15 1dqn_A Guanine phosphoribosylt 99.9 2E-28 7E-33 179.6 2.5 85 2-93 117-205 (230)
16 2xbu_A Hypoxanthine-guanine ph 99.8 1.8E-18 6.1E-23 125.4 7.9 69 1-75 101-194 (221)
17 1vdm_A Purine phosphoribosyltr 99.7 3.6E-18 1.2E-22 115.6 7.0 63 2-72 82-144 (153)
18 1a3c_A PYRR, pyrimidine operon 99.7 2.4E-16 8.2E-21 109.5 8.3 63 1-69 96-162 (181)
19 1ufr_A TT1027, PYR mRNA-bindin 99.7 4E-16 1.4E-20 108.6 8.4 64 1-70 94-161 (181)
20 1wd5_A Hypothetical protein TT 99.6 7.1E-17 2.4E-21 114.9 4.5 75 1-86 118-194 (208)
21 1nul_A XPRT, xanthine-guanine 99.6 5.4E-17 1.8E-21 111.1 2.8 69 1-83 79-148 (152)
22 1w30_A PYRR bifunctional prote 99.6 1.1E-15 3.8E-20 109.0 8.3 64 1-70 110-177 (201)
23 1ecf_A Glutamine phosphoribosy 99.5 7.8E-16 2.7E-20 122.3 1.5 78 1-90 357-438 (504)
24 1vch_A Phosphoribosyltransfera 99.3 4.6E-12 1.6E-16 87.2 7.3 44 2-45 119-162 (175)
25 2yzk_A OPRT, oprtase, orotate 99.2 1.3E-11 4.5E-16 85.9 6.9 45 1-45 104-148 (178)
26 1g2q_A Adenine phosphoribosylt 99.2 1.6E-11 5.6E-16 85.8 6.9 43 2-44 121-163 (187)
27 1y0b_A Xanthine phosphoribosyl 99.2 1.7E-11 5.7E-16 86.0 6.6 43 2-44 119-161 (197)
28 1l1q_A Adenine phosphoribosylt 99.2 1.6E-11 5.5E-16 85.9 6.1 43 2-44 116-160 (186)
29 2p1z_A Phosphoribosyltransfera 99.2 2E-11 6.7E-16 85.3 5.8 45 1-45 112-156 (180)
30 2dy0_A APRT, adenine phosphori 99.2 2.6E-11 8.8E-16 85.0 6.2 43 2-44 125-167 (190)
31 1zn8_A APRT, adenine phosphori 99.2 2.6E-11 9E-16 84.0 6.2 43 2-44 119-161 (180)
32 1ao0_A Glutamine phosphoribosy 99.1 8.8E-12 3E-16 97.9 1.9 78 2-90 337-417 (459)
33 2ps1_A Orotate phosphoribosylt 99.1 7.9E-11 2.7E-15 84.9 6.8 45 1-45 123-167 (226)
34 2aee_A OPRT, oprtase, orotate 99.1 1.2E-10 4.1E-15 82.9 6.8 43 1-43 115-157 (211)
35 2wns_A Orotate phosphoribosylt 99.1 1.6E-10 5.6E-15 82.1 5.9 42 2-43 110-151 (205)
36 1qb7_A APRT, adenine phosphori 99.1 2E-10 6.9E-15 83.5 6.4 43 2-44 137-179 (236)
37 1lh0_A OMP synthase; loop clos 99.0 2.5E-10 8.6E-15 81.7 5.1 43 1-44 116-158 (213)
38 3mjd_A Orotate phosphoribosylt 99.0 4E-10 1.4E-14 82.4 5.9 44 1-44 134-177 (232)
39 1dku_A Protein (phosphoribosyl 99.0 9.5E-11 3.2E-15 88.8 2.1 62 1-65 215-280 (317)
40 1o57_A PUR operon repressor; p 99.0 1E-09 3.6E-14 82.2 7.4 44 2-45 195-238 (291)
41 3m3h_A OPRT, oprtase, orotate 99.0 1.1E-09 3.6E-14 80.2 6.6 42 2-43 136-177 (234)
42 3dez_A OPRT, oprtase, orotate 99.0 1.3E-09 4.4E-14 80.2 6.6 42 2-43 148-189 (243)
43 1u9y_A RPPK;, ribose-phosphate 98.9 1.2E-09 4.1E-14 81.5 5.8 40 1-40 203-242 (284)
44 1i5e_A Uracil phosphoribosyltr 98.9 8.5E-10 2.9E-14 79.1 4.3 44 1-44 122-165 (209)
45 3s5j_B Ribose-phosphate pyroph 98.9 5.3E-10 1.8E-14 85.5 3.0 48 1-48 211-261 (326)
46 2e55_A Uracil phosphoribosyltr 98.9 1.8E-09 6.2E-14 77.9 5.6 45 1-45 119-163 (208)
47 2ji4_A Phosphoribosyl pyrophos 98.9 7.4E-10 2.5E-14 85.9 3.2 62 1-65 270-335 (379)
48 2ehj_A Uracil phosphoribosyltr 98.9 2.3E-09 8E-14 77.3 5.4 46 1-46 121-166 (208)
49 1o5o_A Uracil phosphoribosyltr 98.8 2.6E-09 8.7E-14 77.8 4.7 45 1-45 134-178 (221)
50 1v9s_A Uracil phosphoribosyltr 98.8 2.1E-09 7.2E-14 77.5 3.9 46 1-46 121-166 (208)
51 3lrt_A Ribose-phosphate pyroph 98.8 6.9E-09 2.4E-13 77.9 6.7 63 1-66 201-266 (286)
52 3dah_A Ribose-phosphate pyroph 98.8 1E-08 3.5E-13 78.1 6.3 62 1-65 214-279 (319)
53 3n2l_A OPRT, oprtase, orotate 98.7 1.2E-08 4.1E-13 75.0 5.8 42 2-44 142-183 (238)
54 1bd3_D Uprtase, uracil phospho 98.7 1.2E-08 4.2E-13 75.2 3.8 45 1-45 154-200 (243)
55 3qw4_B UMP synthase; N-termina 98.6 3.1E-08 1.1E-12 78.3 5.2 43 2-44 364-406 (453)
56 3dmp_A Uracil phosphoribosyltr 98.5 1.1E-07 3.6E-12 69.1 3.9 44 1-44 127-172 (217)
57 1xtt_A Probable uracil phospho 98.1 2.5E-06 8.7E-11 61.7 4.7 42 1-43 129-173 (216)
58 3to5_A CHEY homolog; alpha(5)b 77.1 4.1 0.00014 26.2 4.6 32 3-37 12-43 (134)
59 3mm4_A Histidine kinase homolo 68.8 11 0.00037 25.0 5.2 33 2-37 60-92 (206)
60 3h1g_A Chemotaxis protein CHEY 66.4 9.8 0.00034 22.7 4.3 31 2-35 4-34 (129)
61 1o63_A ATP phosphoribosyltrans 60.6 3.2 0.00011 29.8 1.4 13 9-21 146-158 (219)
62 1ve4_A ATP phosphoribosyltrans 59.9 3.4 0.00012 29.4 1.4 13 9-21 151-163 (206)
63 1z7m_E ATP phosphoribosyltrans 58.1 3 0.0001 29.6 0.9 20 9-35 153-172 (208)
64 3t4e_A Quinate/shikimate dehyd 57.7 22 0.00075 26.2 5.5 32 2-37 147-178 (312)
65 2ekd_A Hypothetical protein PH 52.4 7.1 0.00024 27.7 2.0 20 6-25 42-61 (207)
66 2vd3_A ATP phosphoribosyltrans 52.3 5.5 0.00019 29.7 1.4 13 9-21 158-170 (289)
67 3c19_A Uncharacterized protein 52.3 14 0.00049 25.9 3.5 36 9-46 19-55 (186)
68 1h3d_A ATP-phosphoribosyltrans 51.4 5.5 0.00019 29.8 1.4 13 9-21 167-179 (299)
69 3hix_A ALR3790 protein; rhodan 50.7 28 0.00094 20.8 4.4 32 2-36 51-82 (106)
70 2jtq_A Phage shock protein E; 49.9 33 0.0011 19.4 4.9 32 2-36 40-71 (85)
71 1nh8_A ATP phosphoribosyltrans 49.9 6.1 0.00021 29.7 1.4 13 9-21 172-184 (304)
72 3tum_A Shikimate dehydrogenase 47.4 36 0.0012 24.5 5.2 32 2-37 124-155 (269)
73 3ilm_A ALR3790 protein; rhodan 46.7 32 0.0011 21.8 4.4 32 2-36 55-86 (141)
74 3i42_A Response regulator rece 46.2 13 0.00043 21.9 2.2 28 1-31 1-28 (127)
75 1jbe_A Chemotaxis protein CHEY 45.6 43 0.0015 19.4 4.7 30 2-34 3-32 (128)
76 3pwz_A Shikimate dehydrogenase 45.4 43 0.0015 24.0 5.3 32 2-37 119-150 (272)
77 3o8q_A Shikimate 5-dehydrogena 45.3 47 0.0016 23.9 5.5 32 2-37 125-156 (281)
78 3eod_A Protein HNR; response r 44.9 17 0.00058 21.4 2.7 28 1-31 5-32 (130)
79 3fbt_A Chorismate mutase and s 44.6 32 0.0011 25.0 4.5 32 2-37 121-152 (282)
80 3jyo_A Quinate/shikimate dehyd 43.9 47 0.0016 23.9 5.4 33 1-37 125-157 (283)
81 3gk5_A Uncharacterized rhodane 43.8 42 0.0014 20.0 4.5 31 2-36 54-84 (108)
82 3t6k_A Response regulator rece 43.6 17 0.00059 21.9 2.6 28 1-31 2-29 (136)
83 1dbw_A Transcriptional regulat 43.1 21 0.00072 20.9 2.9 28 1-31 1-28 (126)
84 3foj_A Uncharacterized protein 42.2 50 0.0017 19.2 5.0 30 2-35 55-84 (100)
85 3tnl_A Shikimate dehydrogenase 41.4 55 0.0019 24.1 5.5 33 1-37 152-184 (315)
86 3eqz_A Response regulator; str 40.3 14 0.00048 21.7 1.8 26 1-29 1-26 (135)
87 3h5i_A Response regulator/sens 39.7 19 0.00064 21.7 2.3 28 1-31 3-30 (140)
88 2rdm_A Response regulator rece 38.9 21 0.00072 20.9 2.4 28 1-31 3-30 (132)
89 1dcf_A ETR1 protein; beta-alph 37.9 25 0.00086 20.8 2.7 27 2-31 6-32 (136)
90 1gmx_A GLPE protein; transfera 36.9 34 0.0011 20.3 3.1 31 2-35 57-87 (108)
91 2qr3_A Two-component system re 36.0 19 0.00066 21.3 1.9 28 1-31 1-28 (140)
92 3eme_A Rhodanese-like domain p 35.9 63 0.0021 18.8 4.3 30 2-35 55-84 (103)
93 1xhf_A DYE resistance, aerobic 35.9 26 0.00087 20.3 2.4 28 1-31 1-28 (123)
94 3n53_A Response regulator rece 35.4 18 0.00063 21.6 1.8 26 1-29 1-26 (140)
95 2vd2_A ATP phosphoribosyltrans 35.0 3.3 0.00011 29.6 -2.0 20 9-35 155-174 (214)
96 3rqi_A Response regulator prot 34.5 26 0.00088 22.4 2.5 28 1-31 5-32 (184)
97 3kwm_A Ribose-5-phosphate isom 34.2 32 0.0011 24.5 3.0 23 13-36 32-54 (224)
98 2lpm_A Two-component response 32.9 32 0.0011 21.6 2.7 26 4-32 9-34 (123)
99 1k68_A Phytochrome response re 32.7 31 0.0011 20.1 2.5 27 2-31 1-27 (140)
100 1njg_A DNA polymerase III subu 32.5 95 0.0033 19.6 5.0 36 3-39 126-162 (250)
101 3crn_A Response regulator rece 32.3 29 0.00098 20.6 2.3 28 1-31 1-28 (132)
102 3hzh_A Chemotaxis response reg 32.0 75 0.0026 19.3 4.3 25 4-31 37-61 (157)
103 2vdc_G Glutamate synthase [NAD 31.5 83 0.0029 23.8 5.2 32 2-37 263-294 (456)
104 2hhg_A Hypothetical protein RP 31.5 66 0.0023 19.7 4.0 32 2-36 85-116 (139)
105 1srr_A SPO0F, sporulation resp 31.4 31 0.0011 20.0 2.3 28 1-31 1-28 (124)
106 1k66_A Phytochrome response re 30.7 37 0.0013 20.1 2.6 28 1-31 4-31 (149)
107 3don_A Shikimate dehydrogenase 30.2 42 0.0015 24.1 3.2 32 2-37 116-147 (277)
108 3jte_A Response regulator rece 29.7 37 0.0013 20.2 2.5 28 1-31 1-28 (143)
109 3cnb_A DNA-binding response re 29.5 84 0.0029 18.3 4.1 32 2-36 7-39 (143)
110 3kht_A Response regulator; PSI 29.3 32 0.0011 20.6 2.1 29 1-32 3-31 (144)
111 3g5j_A Putative ATP/GTP bindin 29.0 82 0.0028 18.8 4.1 29 4-35 90-118 (134)
112 2okg_A Central glycolytic gene 28.8 31 0.0011 24.3 2.3 28 13-40 62-90 (255)
113 3f6p_A Transcriptional regulat 28.5 40 0.0014 19.6 2.5 26 3-31 2-27 (120)
114 2qsj_A DNA-binding response re 28.5 35 0.0012 20.6 2.2 24 1-24 1-24 (154)
115 2pln_A HP1043, response regula 28.3 43 0.0015 19.7 2.6 27 2-31 17-43 (137)
116 1i16_A Interleukin 16, LCF; cy 28.1 1.1E+02 0.0036 18.9 4.6 37 2-38 78-114 (130)
117 3kyj_B CHEY6 protein, putative 28.1 66 0.0023 19.1 3.5 24 3-29 13-36 (145)
118 2egg_A AROE, shikimate 5-dehyd 27.8 1.2E+02 0.004 21.7 5.3 32 2-37 140-171 (297)
119 2z0l_A EA-D, BMRF1, early anti 27.8 1.1E+02 0.0038 23.1 5.1 42 12-53 169-218 (318)
120 2rjn_A Response regulator rece 27.1 44 0.0015 20.2 2.5 28 1-31 5-32 (154)
121 3c3m_A Response regulator rece 27.0 47 0.0016 19.7 2.6 28 1-31 1-28 (138)
122 2k0z_A Uncharacterized protein 26.7 1E+02 0.0036 18.2 4.3 29 2-33 55-83 (110)
123 2chg_A Replication factor C sm 26.1 90 0.0031 19.6 4.0 29 3-31 102-131 (226)
124 1tmy_A CHEY protein, TMY; chem 26.1 88 0.003 17.7 3.7 26 3-31 2-27 (120)
125 2c1l_A Restriction endonucleas 26.0 91 0.0031 23.5 4.4 57 3-72 65-123 (358)
126 1dc7_A NTRC, nitrogen regulati 26.0 32 0.0011 19.6 1.7 28 1-31 1-28 (124)
127 1mb3_A Cell division response 25.9 48 0.0017 18.9 2.5 26 3-31 1-26 (124)
128 2fsx_A RV0390, COG0607: rhodan 25.7 58 0.002 20.5 3.0 30 3-35 80-109 (148)
129 3grc_A Sensor protein, kinase; 25.2 54 0.0018 19.3 2.6 27 2-31 5-31 (140)
130 2r25_B Osmosensing histidine p 25.0 91 0.0031 18.3 3.7 30 3-35 2-31 (133)
131 3eul_A Possible nitrate/nitrit 24.3 48 0.0017 20.0 2.3 27 2-31 14-40 (152)
132 1zl0_A Hypothetical protein PA 24.1 52 0.0018 24.2 2.8 36 4-39 213-249 (311)
133 2gkg_A Response regulator homo 24.1 51 0.0017 18.7 2.3 26 3-31 5-30 (127)
134 3m6m_D Sensory/regulatory prot 24.0 44 0.0015 20.2 2.1 27 2-31 13-39 (143)
135 3b2n_A Uncharacterized protein 23.9 45 0.0015 19.6 2.1 24 1-24 1-24 (133)
136 3cg4_A Response regulator rece 23.8 58 0.002 19.1 2.6 27 2-31 6-32 (142)
137 2zay_A Response regulator rece 23.7 57 0.0019 19.4 2.5 24 2-25 7-30 (147)
138 3gl9_A Response regulator; bet 23.7 56 0.0019 19.0 2.5 26 3-31 2-27 (122)
139 2j48_A Two-component sensor ki 23.5 55 0.0019 18.1 2.3 26 3-31 1-26 (119)
140 1tq1_A AT5G66040, senescence-a 23.3 57 0.002 20.0 2.5 30 3-35 82-111 (129)
141 3kcn_A Adenylate cyclase homol 23.2 43 0.0015 20.2 1.9 18 2-19 3-20 (151)
142 2b4a_A BH3024; flavodoxin-like 23.1 62 0.0021 19.0 2.6 27 2-31 14-40 (138)
143 3d1p_A Putative thiosulfate su 23.0 1.4E+02 0.0047 18.3 4.4 30 3-35 91-120 (139)
144 1mvo_A PHOP response regulator 23.0 58 0.002 19.0 2.5 26 3-31 3-28 (136)
145 1r6j_A Syntenin 1; PDZ, membra 22.9 87 0.003 18.3 3.2 34 2-36 43-76 (82)
146 3nze_A Putative transcriptiona 22.5 28 0.00094 24.9 1.0 27 13-39 62-88 (267)
147 1wi4_A Synip, syntaxin binding 22.4 91 0.0031 18.7 3.3 29 2-30 62-90 (109)
148 2gnp_A Transcriptional regulat 22.2 32 0.0011 24.4 1.2 28 13-40 63-90 (266)
149 1jr3_A DNA polymerase III subu 22.2 1.8E+02 0.006 20.3 5.3 37 3-40 119-156 (373)
150 3iwh_A Rhodanese-like domain p 22.2 1.2E+02 0.004 18.1 3.8 29 2-33 55-83 (103)
151 2qvg_A Two component response 22.1 60 0.002 19.1 2.4 27 2-31 6-32 (143)
152 3lte_A Response regulator; str 22.0 58 0.002 18.9 2.3 27 2-31 5-31 (132)
153 4e5s_A MCCFLIKE protein (BA_56 22.0 82 0.0028 23.2 3.5 37 4-40 225-266 (331)
154 3cz5_A Two-component response 21.8 40 0.0014 20.4 1.5 25 1-28 3-27 (153)
155 1uar_A Rhodanese; sulfurtransf 21.8 1.5E+02 0.005 20.4 4.7 32 2-36 78-110 (285)
156 3g23_A Peptidase U61, LD-carbo 21.2 51 0.0017 23.8 2.2 36 4-39 186-222 (274)
157 3cg0_A Response regulator rece 20.9 85 0.0029 18.3 2.9 27 2-31 8-34 (140)
158 1lk5_A D-ribose-5-phosphate is 20.9 58 0.002 23.0 2.4 17 13-29 26-42 (229)
159 1e0c_A Rhodanese, sulfurtransf 20.6 1.2E+02 0.0042 20.7 4.1 32 2-36 80-112 (271)
160 2d92_A INAD-like protein; PDZ 20.5 1.3E+02 0.0045 17.7 3.8 34 2-35 65-98 (108)
161 3iog_A Beta-lactamase; hydrola 20.5 77 0.0026 20.6 2.9 31 12-42 36-69 (227)
162 1qxn_A SUD, sulfide dehydrogen 20.5 71 0.0024 19.9 2.6 32 2-36 81-112 (137)
163 3mvn_A UDP-N-acetylmuramate:L- 20.3 1.3E+02 0.0043 19.4 3.9 25 5-29 36-60 (163)
164 4dad_A Putative pilus assembly 20.3 59 0.002 19.3 2.1 25 3-30 20-44 (146)
165 3o46_A Maguk P55 subfamily mem 20.2 1.3E+02 0.0045 17.0 3.7 29 2-30 49-77 (93)
166 2o0m_A Transcriptional regulat 20.2 37 0.0013 24.8 1.3 28 13-40 148-177 (345)
No 1
>3acd_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 3acc_A* 3acb_A*
Probab=100.00 E-value=8.6e-36 Score=211.89 Aligned_cols=87 Identities=47% Similarity=0.762 Sum_probs=85.2
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCCCceeceeecCccCeEEEEEeCCEEEEeecCChhHhh
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELY 80 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~~~~~~~~pD~~~~~y~g~~i~~~~vvgygld~~~~~ 80 (95)
++||+|||||||+|||+||+++.+.|.+.||+++++|+|++|+.+++.+++|| |+||++||+|||||||||+|+|
T Consensus 93 i~gk~VllVDDIldTG~Tl~~~~~~l~~~~p~sv~~avLl~K~~~r~~pi~~D-----yvG~~ipd~fvvGyGlDy~~~~ 167 (181)
T 3acd_A 93 IHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLSKPSRRQVEVPIH-----YLGFEIEDAYVYGYGLDRAQFD 167 (181)
T ss_dssp CTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEECGGGCSSCCCCS-----EEEEECCSCCEEBTTBCBTTBC
T ss_pred cCCCeeEEEEEEEcCchhHHHHHHHHhcCCCCEEEEEEEEEcCccccCCCCCC-----EEEEECCCceEEECCcCccccc
Confidence 47999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred hCCCceeecCCc
Q 034410 81 RNLPYVGVLKPE 92 (95)
Q Consensus 81 R~l~~v~~l~~~ 92 (95)
||||+||+++||
T Consensus 168 Rnlp~i~~l~~e 179 (181)
T 3acd_A 168 RNLPFITSIRPE 179 (181)
T ss_dssp TTCSSBEECCCC
T ss_pred cCCCeeEEeCCC
Confidence 999999999997
No 2
>2ywu_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 2ywt_A* 2yws_A* 3acb_A 3acc_A* 3acd_A*
Probab=99.97 E-value=1.8e-32 Score=194.17 Aligned_cols=88 Identities=47% Similarity=0.742 Sum_probs=84.0
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCCCceeceeecCccCeEEEEEeCCEEEEeecCChhHhh
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELY 80 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~~~~~~~~pD~~~~~y~g~~i~~~~vvgygld~~~~~ 80 (95)
++||+|||||||++||+|+.++++.|+++||+++++|+|++|+..++.++.|| |+|+++|++|||||||||+|.|
T Consensus 93 ~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~~~~~~~~~d-----~~g~~ip~~fvvGygld~~~~~ 167 (181)
T 2ywu_A 93 IHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLSKPSRRQVEVPIH-----YLGFEIEDAYVYGYGLDRAQFD 167 (181)
T ss_dssp CTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEECGGGCSSCCCCS-----EEEEECCSCCEEBTTBCBTTBC
T ss_pred CCCCEEEEECCeeCChHHHHHHHHHHHhcCCcEEEEEEEEECCCCccCCCCCC-----EEEEEcCCCeEEECCCChhhcc
Confidence 36899999999999999999999999999999999999999998888899999 9999999999999999999999
Q ss_pred hCCCceeecCCcc
Q 034410 81 RNLPYVGVLKPEC 93 (95)
Q Consensus 81 R~l~~v~~l~~~~ 93 (95)
||||+||+++++.
T Consensus 168 Rnlp~i~~~~~~~ 180 (181)
T 2ywu_A 168 RNLPFITSIRPEE 180 (181)
T ss_dssp TTCSSBEECCCC-
T ss_pred CCCCeeEEecCCC
Confidence 9999999999874
No 3
>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0
Probab=99.97 E-value=1.4e-32 Score=195.66 Aligned_cols=90 Identities=44% Similarity=0.787 Sum_probs=82.6
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCCCceeceeecCccCeEEEEEeCCEEEEeecCChhHhh
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELY 80 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~~~~~~~~pD~~~~~y~g~~i~~~~vvgygld~~~~~ 80 (95)
++||+|||||||++||+||.++++.|+++||+++++|+|++|+.+++.++.|| |+|+++|++|||||||||+|.|
T Consensus 92 ~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~~~~~~i~~d-----y~G~~ip~~fvvGygld~~~~~ 166 (186)
T 3o7m_A 92 ITGKNVIVVEDIIDSGLTLHFLKDHFFMHKPKALKFCTLLDKPERRKVDLTAE-----YVGFQIPDEFIVGYGIDCAEKY 166 (186)
T ss_dssp CTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGGCSSCCCCS-----EEEEECCCSSEEBTTBCBTTBC
T ss_pred CCcCEEEEEcCeeCCcHHHHHHHHHHHhcCCcEEEEEEEEECCCCCcCCCCCC-----EEEEEcCCCeEEECCCChHHhh
Confidence 36899999999999999999999999999999999999999998888899999 9999999999999999999999
Q ss_pred hCCCcee-ecCCcccC
Q 034410 81 RNLPYVG-VLKPECYK 95 (95)
Q Consensus 81 R~l~~v~-~l~~~~~~ 95 (95)
||||+|+ +++|+.++
T Consensus 167 Rnlp~i~~~~~~~~~~ 182 (186)
T 3o7m_A 167 RNLPFIASVVTEESYN 182 (186)
T ss_dssp TTCSSEEEEEC-----
T ss_pred CCCcHHHhhhCHhhhc
Confidence 9999999 99998764
No 4
>3ozf_A Hypoxanthine-guanine-xanthine phosphoribosyltrans; transferase-transferase inhibitor complex; HET: HPA; 1.94A {Plasmodium falciparum fcr-3} PDB: 3ozg_A* 1cjb_A*
Probab=99.97 E-value=2.6e-32 Score=202.85 Aligned_cols=88 Identities=31% Similarity=0.434 Sum_probs=85.3
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCCCceeceeecCccCeEEEEEeCCEEEEeecCChhHhhh
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYR 81 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~~~~~~~~pD~~~~~y~g~~i~~~~vvgygld~~~~~R 81 (95)
+||+|||||||++||+||.++++.|+++||+++++|+|++|+..++.++.|| |+|+++||+|||||||||+|.||
T Consensus 155 ~gk~VlIVDDii~TG~Tl~~~~~~L~~~g~~~v~va~l~~k~~~r~~~i~~D-----yvG~~ipd~fvVGYGlDy~e~~R 229 (250)
T 3ozf_A 155 KGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRTPLWNGFKAD-----FVGFSIPDHFVVGYSLDYNEIFR 229 (250)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHGGGCCSEEEEEEEEEECCTTCCCCBCS-----EEEEEECSSCEEBTTBCBTTBST
T ss_pred CCCEEEEEeceeCchHHHHHHHHHHHhcCCCEEEEEEEEECCccccCCCCCc-----EEEEEcCCCeEEECCcccccccc
Confidence 6899999999999999999999999999999999999999999888999999 99999999999999999999999
Q ss_pred CCCceeecCCccc
Q 034410 82 NLPYVGVLKPECY 94 (95)
Q Consensus 82 ~l~~v~~l~~~~~ 94 (95)
|||+||+++++.+
T Consensus 230 nLp~I~~l~~~~~ 242 (250)
T 3ozf_A 230 DLDHCCLVNDEGK 242 (250)
T ss_dssp TCSSEEEECHHHH
T ss_pred CCCceEEECHHHh
Confidence 9999999998764
No 5
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A
Probab=99.97 E-value=1e-31 Score=189.69 Aligned_cols=87 Identities=47% Similarity=0.821 Sum_probs=83.8
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCCCceeceeecCccCeEEEEEeCCEEEEeecCChhHhh
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELY 80 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~~~~~~~~pD~~~~~y~g~~i~~~~vvgygld~~~~~ 80 (95)
++||+||||||+++||+|+.++++.|+++||+++++|+++.|+..++.++.|| |+|+++|++|+|||||||+|+|
T Consensus 89 ~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~~~~~~~~~~~~d-----~~g~~~p~~fvvgyglD~~~~~ 163 (177)
T 3ohp_A 89 IKGKDVLLVEDIIDTGNTLNKVKEILALREPKSIRICTLLDKPTRREVDVEVN-----WVGFEIPDEFVVGVGIDYAQKY 163 (177)
T ss_dssp CTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGGCSSCCCCS-----EEEEECCSCCEEBTTBCBTTBC
T ss_pred cCCCEEEEEeeEeCcHHHHHHHHHHHHhcCCcEEEEEEEEECCccccCCCCcc-----EEEEEcCCCeEEECCCCccccc
Confidence 36899999999999999999999999999999999999999998888899999 9999999999999999999999
Q ss_pred hCCCceeecCCc
Q 034410 81 RNLPYVGVLKPE 92 (95)
Q Consensus 81 R~l~~v~~l~~~ 92 (95)
||||+|++++|+
T Consensus 164 Rnlp~i~~~~~~ 175 (177)
T 3ohp_A 164 RHLPYIGKVVPL 175 (177)
T ss_dssp TTCSSEEEEEEC
T ss_pred CCCCeeEEecCC
Confidence 999999999876
No 6
>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A*
Probab=99.97 E-value=9.6e-32 Score=194.26 Aligned_cols=90 Identities=51% Similarity=0.825 Sum_probs=85.9
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCCCceeceeecCccCeEEEEEeCCEEEEeecCChhHhh
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELY 80 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~~~~~~~~pD~~~~~y~g~~i~~~~vvgygld~~~~~ 80 (95)
++||+||||||+++||+|+.++++.|+++||+++++|+++.|+..++.++.|| |+|+++|++|||||||||+|.|
T Consensus 114 ~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~~~~~~~~~D-----y~g~~ipd~fvvGyglD~~e~~ 188 (204)
T 3hvu_A 114 VEGRDILIVEDIIDSGLTLSYLVDLFKYRKAKSVKIVTLLDKPTGRKVDLKAD-----YVGFTVPHEFVVGYGLDYKEQY 188 (204)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECGGGCSSCCCCS-----EEEEECCSCCEEBTTBCBTTBS
T ss_pred CCCCEEEEEeceeCchHHHHHHHHHHHHcCCCEEEEEEEEECCCCCcCCCCCC-----EEEEEcCCCeEEECCCChhhhh
Confidence 36899999999999999999999999999999999999999998888899999 9999999999999999999999
Q ss_pred hCCCceeecCCcccC
Q 034410 81 RNLPYVGVLKPECYK 95 (95)
Q Consensus 81 R~l~~v~~l~~~~~~ 95 (95)
||||+||++++++++
T Consensus 189 Rnlp~I~~l~~~~~~ 203 (204)
T 3hvu_A 189 RNLPYVGVLKPSVYS 203 (204)
T ss_dssp TTCSSEEEECHHHHC
T ss_pred CCCCceEEEcchhcC
Confidence 999999999998763
No 7
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=99.96 E-value=1.9e-29 Score=176.96 Aligned_cols=90 Identities=40% Similarity=0.726 Sum_probs=82.7
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCC-CceeceeecCccCeEEEEEeCCEEEEeecCChhHh
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPA-RRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAEL 79 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~-~~~~~~~pD~~~~~y~g~~i~~~~vvgygld~~~~ 79 (95)
++||+||||||+++||+||.++++.|+++|++++.+++++.+++ .++.++.|| |+|+++|++|+||||||+++.
T Consensus 93 ~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~g~~~~~~~~d-----~~g~~~p~~f~vgyg~d~~~~ 167 (183)
T 1hgx_A 93 IEGRHVLVVEDIIDTGLTMYQLLNNLQMRKPASLKVCTLCDKDIGKKAYDVPID-----YCGFVVENRYIIGYGFDFHNK 167 (183)
T ss_dssp CTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECCSSCSSCCCCS-----EEEEEECSSCEEBTTBCBTTB
T ss_pred CCCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEEEEEecCcccccCCCCCC-----EEEEEeCCeEEEECCcccCcc
Confidence 36899999999999999999999999999999999999999997 777899999 999999999999999999999
Q ss_pred hhCCCceeecCCcccC
Q 034410 80 YRNLPYVGVLKPECYK 95 (95)
Q Consensus 80 ~R~l~~v~~l~~~~~~ 95 (95)
|||+|+|++++++.++
T Consensus 168 ~r~~~~i~~~~~~~~~ 183 (183)
T 1hgx_A 168 YRNLPVIGILKESVYT 183 (183)
T ss_dssp STTCSSEEEECC----
T ss_pred cCCCCcEEEecccccC
Confidence 9999999999988653
No 8
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=99.96 E-value=2.1e-29 Score=177.48 Aligned_cols=90 Identities=52% Similarity=0.920 Sum_probs=84.7
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCCCceeceeecCccCeEEEEEeCCEEEEeecCChhHhh
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELY 80 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~~~~~~~~pD~~~~~y~g~~i~~~~vvgygld~~~~~ 80 (95)
++||+||||||+++||+||.++++.|+++||++|.+++++.++..++.++.|| |+|+++|++|+||||||++|.|
T Consensus 96 ~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~~~~~~~d-----~~g~~~p~~f~vgyg~d~~~~~ 170 (185)
T 2geb_A 96 IEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPERREADVKVD-----YCGFKIPDKFVVGYGIDYAEKY 170 (185)
T ss_dssp CTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGGCCSCCCCS-----EEEEECCSCCEEBTTBCBTTBS
T ss_pred CCCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEEEEEECCCcccCCCCCC-----EEEEEcCCCcEEEcCccccccc
Confidence 36899999999999999999999999999999999999999998777889999 9999999999999999999999
Q ss_pred hCCCceeecCCcccC
Q 034410 81 RNLPYVGVLKPECYK 95 (95)
Q Consensus 81 R~l~~v~~l~~~~~~ 95 (95)
||+|+|++++++.++
T Consensus 171 r~lp~i~~~~~~~~~ 185 (185)
T 2geb_A 171 RNLPFIGVLKPELYK 185 (185)
T ss_dssp TTCSSEEEECGGGC-
T ss_pred CCCCceEEecccccC
Confidence 999999999987663
No 9
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=99.96 E-value=1.9e-29 Score=181.78 Aligned_cols=90 Identities=43% Similarity=0.646 Sum_probs=83.8
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCCCceeceeecCccCeEEEEEeCCEEEEeecCChhHhh
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELY 80 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~~~~~~~~pD~~~~~y~g~~i~~~~vvgygld~~~~~ 80 (95)
++||+|||||||++||+||.++++.|+++||++|++|+++.|+..++.++.|| |+|+++|++|+||||||++|.|
T Consensus 116 v~gk~VllVDDvi~TG~Tl~aa~~~L~~~Ga~~V~v~~l~~k~~~~~~~~~~d-----~~g~~ip~~fvvgygld~~e~y 190 (211)
T 1pzm_A 116 VENRHIMLVEDIVDSAITLQYLMRFMLAKKPASLKTVVLLDKPSGRKVDVLVD-----YPVITIPRAFVIGYGMDFAESY 190 (211)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGGCSSCCCCS-----EEEEECCSCCEEBTTBCBTTBC
T ss_pred CCCCEEEEECCccccHHHHHHHHHHHHhcCCCEEEEEEEEecCccCcCCCCCC-----EEEEECCCCeeEECccCHHHHh
Confidence 37899999999999999999999999999999999999999998788889999 9999999999999999999999
Q ss_pred hCCCceeecCCcccC
Q 034410 81 RNLPYVGVLKPECYK 95 (95)
Q Consensus 81 R~l~~v~~l~~~~~~ 95 (95)
||+|+|++++++.++
T Consensus 191 r~l~~i~~~~~~~~~ 205 (211)
T 1pzm_A 191 RELRDICVLKKEYYE 205 (211)
T ss_dssp TTCSSEEEECCC---
T ss_pred cCCCceEEEChHHhc
Confidence 999999999987653
No 10
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=99.96 E-value=5e-29 Score=181.10 Aligned_cols=90 Identities=36% Similarity=0.572 Sum_probs=83.9
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCCCceeceeecCccCeEEEEEeCCEEEEeecCChhHhh
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELY 80 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~~~~~~~~pD~~~~~y~g~~i~~~~vvgygld~~~~~ 80 (95)
++||+|||||||++||+||.++++.|+++||++|.+|+++.|+..++.++.|| |+|+++|++|+||||||++|.|
T Consensus 101 v~Gk~VLLVDDii~TG~Tl~~a~~~L~~~Ga~~V~v~~l~~k~~~~~~~~~~d-----y~g~~ip~~fvvgyg~d~~e~y 175 (220)
T 1tc1_A 101 IEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKREGRRVPFSAD-----YVVANIPNAFVIGYGLDYDDTY 175 (220)
T ss_dssp CTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECTTCCSSCCCCS-----EEEEECCSCEEEBTTBCBTTBS
T ss_pred CCCCEEEEEeCccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCccCcCCCCCC-----EEEEECCchheeEccccHHHhh
Confidence 47999999999999999999999999999999999999999998888889999 9999999999999999999999
Q ss_pred hCCCceeecCCcccC
Q 034410 81 RNLPYVGVLKPECYK 95 (95)
Q Consensus 81 R~l~~v~~l~~~~~~ 95 (95)
||+|+|++++++.++
T Consensus 176 r~lp~i~~~~~~~~~ 190 (220)
T 1tc1_A 176 RELRDIVVLRPEVYA 190 (220)
T ss_dssp TTCSSEEEEECC---
T ss_pred cCCCCeeeCCHHHHh
Confidence 999999999987653
No 11
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A
Probab=99.96 E-value=2.8e-29 Score=183.27 Aligned_cols=89 Identities=33% Similarity=0.481 Sum_probs=84.6
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCCCceeceeecCccCeEEEEEeCCEEEEeecCChhHhh
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELY 80 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~~~~~~~~pD~~~~~y~g~~i~~~~vvgygld~~~~~ 80 (95)
++||+||||||+++||+||.++++.|+++||+++++|+++.|+..+..++.|| |+|+++|+.|+||||||++|.|
T Consensus 140 ~~Gk~VLIVDDii~TG~Tl~~a~~~L~~~ga~~V~vavl~~k~~~~~~~~~~d-----y~g~~ip~~fvVgygld~~e~~ 214 (233)
T 1fsg_A 140 FRDKHVLIVEDIVDTGFTLTEFGERLKAVGPKSMRIATLVEKRTDRSNSLKGD-----FVGFSIEDVWIVGCCYDFNEMF 214 (233)
T ss_dssp GTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECCTTCCSCBCS-----EEEEEECSCCEEBTTBCBTTBS
T ss_pred cCCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCccccCCCCcc-----EEEEEcCCcceEEcCcCHHHhh
Confidence 36899999999999999999999999999999999999999998888889999 9999999999999999999999
Q ss_pred hCCCceeecCCccc
Q 034410 81 RNLPYVGVLKPECY 94 (95)
Q Consensus 81 R~l~~v~~l~~~~~ 94 (95)
||||+||+++++.+
T Consensus 215 r~l~~i~~~~~~~~ 228 (233)
T 1fsg_A 215 RDFDHVAVLSDAAR 228 (233)
T ss_dssp TTCSSEEECCHHHH
T ss_pred CCCCceEEECHHHH
Confidence 99999999998643
No 12
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}
Probab=99.95 E-value=2.4e-29 Score=182.53 Aligned_cols=89 Identities=33% Similarity=0.524 Sum_probs=83.5
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCCCceeceeecCccCeEEEEEeCCEEEEeecCChhHhh
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELY 80 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~~~~~~~~pD~~~~~y~g~~i~~~~vvgygld~~~~~ 80 (95)
++||+||||||+++||+||.++++.|+++||+++++|+++.|+..+..++.|| |+|+++|++|+||||||++|.|
T Consensus 132 v~Gk~VllVDDii~TG~Tl~~a~~~L~~~ga~~V~va~l~~k~~~~~~~~~~d-----y~g~~ip~~fvvgygld~~~~~ 206 (225)
T 2jbh_A 132 LAGKNVLIVEDVVGTGRTMKALLSNIEKYKPNMIKVASLLVKRTSRSDGFRPD-----YAGFEIPNLFVVGYALDYNEYF 206 (225)
T ss_dssp GTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC-CCSCCCCS-----EEEEEECSSCCBBTTBCBTTBS
T ss_pred cCCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCccccCCCCcc-----EEEEECCCCeEEEccccHhhhh
Confidence 36899999999999999999999999999999999999999998888889999 9999999999999999999999
Q ss_pred hCCCceeecCCccc
Q 034410 81 RNLPYVGVLKPECY 94 (95)
Q Consensus 81 R~l~~v~~l~~~~~ 94 (95)
||||+||+++++.+
T Consensus 207 r~lp~i~~~~~~~~ 220 (225)
T 2jbh_A 207 RDLNHICVINEHGK 220 (225)
T ss_dssp TTCSSEEEECHHHH
T ss_pred CCCCceEEECHHHh
Confidence 99999999998643
No 13
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=99.95 E-value=7e-29 Score=177.14 Aligned_cols=89 Identities=52% Similarity=0.920 Sum_probs=84.5
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCCCceeceeecCccCeEEEEEeCCEEEEeecCChhHhh
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELY 80 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~~~~~~~~pD~~~~~y~g~~i~~~~vvgygld~~~~~ 80 (95)
++||+||||||+++||+|+.++++.|+++|+++|.+++++.++..++.++.|| |+|+++|++|+||||||++|.|
T Consensus 116 ~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~~~~~~~d-----~~g~~~p~~f~vgyg~d~~~~~ 190 (205)
T 1yfz_A 116 IEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPERREADVKVD-----YCGFKIPDKFVVGYGLDYAEKY 190 (205)
T ss_dssp CTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGGCCSCCCCS-----EEEEECCSSCCBBTTBCBTTBS
T ss_pred CCcCEEEEECCccCcHHHHHHHHHHHHhcCCCEEEEEEEEecCccccCCCCCC-----EEEEEcCCccEEECCcchhhcc
Confidence 36899999999999999999999999999999999999999997777889999 9999999999999999999999
Q ss_pred hCCCceeecCCccc
Q 034410 81 RNLPYVGVLKPECY 94 (95)
Q Consensus 81 R~l~~v~~l~~~~~ 94 (95)
||+|+|++++++.+
T Consensus 191 r~lp~i~~~~~~~~ 204 (205)
T 1yfz_A 191 RNLPFIGVLKPELY 204 (205)
T ss_dssp TTCSSEEEECGGGC
T ss_pred cCCCceEEeccccc
Confidence 99999999998765
No 14
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*
Probab=99.95 E-value=2.4e-28 Score=176.63 Aligned_cols=87 Identities=36% Similarity=0.537 Sum_probs=79.3
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCCCceeceeecCccCeEEEEEeCCEEEEeecCChhHhhh
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYR 81 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~~~~~~~~pD~~~~~y~g~~i~~~~vvgygld~~~~~R 81 (95)
+||+||||||+++||+||.++++.|+++||+++.+|+++.++..+..++.|| |+|+++|+.|+|||||||++.||
T Consensus 125 ~gk~VliVDDii~TG~Tl~~~~~~L~~~g~~~v~~~~l~~k~~~~~~~~~~d-----yvg~~~p~~f~Vgygld~~~~yr 199 (217)
T 1z7g_A 125 TGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRTPRSVGYKPD-----FVGFEIPDKFVVGYALDYNEYFR 199 (217)
T ss_dssp TTSEEEEEEEECCCHHHHHHHHHHHHTTCCSEEEEEEEEEECC-----CCCS-----EEEEEECSCCEEBTTBCBTTBST
T ss_pred CCCEEEEEeceeCcHHHHHHHHHHHHhcCCCEEEEEEEEECcccccCCCCCc-----EEEEEcCCCCeEECCCCHHHhhC
Confidence 6899999999999999999999999999999999999999998777789999 99999999999999999999999
Q ss_pred CCCceeecCCcc
Q 034410 82 NLPYVGVLKPEC 93 (95)
Q Consensus 82 ~l~~v~~l~~~~ 93 (95)
|+|+|++++++.
T Consensus 200 ~~~~i~~~~~~~ 211 (217)
T 1z7g_A 200 DLNHVCVISETG 211 (217)
T ss_dssp TCCSEEEECHHH
T ss_pred CCCceEEECHhH
Confidence 999999999864
No 15
>1dqn_A Guanine phosphoribosyltransferase; protein-inhibitor complex, Mg IONS, pyrophosphate, transition state analogue; HET: IMU; 1.75A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1dqp_A*
Probab=99.94 E-value=2e-28 Score=179.63 Aligned_cols=85 Identities=19% Similarity=0.329 Sum_probs=79.3
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCC--CceeceeecCccCeEEEEE-eCC-EEEEeecCChh
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPA--RRKIQVELVGEGKFYRGFE-CPD-YFVVGYGMDFA 77 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~--~~~~~~~pD~~~~~y~g~~-i~~-~~vvgygld~~ 77 (95)
+||+|||||||+|||+||.++++.|++ +++|+|++|++ +++.++.|| ++.|+|++ +|+ +|+|||||||+
T Consensus 117 ~Gk~VLIVDDIidTG~Tl~~a~~~L~~-----V~vavLl~k~~~~~r~~~i~~D--~~~yvg~~~ipd~~fvVGyglD~~ 189 (230)
T 1dqn_A 117 EKREVVLIDEYVDSGHTIFSIQEQIKH-----AKICSCFVKDVDAIKKHSALAD--TKMFYGYTPMPKGSWLIGFGLDDN 189 (230)
T ss_dssp HCSSEEEEEEEESSSHHHHHHHHHSTT-----CEEEEEEESCHHHHHTSTTTTT--CCEEEEECCCCTTCCEEBTTBCBT
T ss_pred CCCEEEEEeeEcChHHHHHHHHHHhhc-----CEEEEEEECCccccccCCcCCC--CceEEEEEECCCCCeEEEcCcchH
Confidence 589999999999999999999999987 89999999998 777888888 46799999 999 99999999999
Q ss_pred HhhhCCCceeecCCcc
Q 034410 78 ELYRNLPYVGVLKPEC 93 (95)
Q Consensus 78 ~~~R~l~~v~~l~~~~ 93 (95)
|.|||||+|++++++.
T Consensus 190 e~yRnlp~i~~~~~~~ 205 (230)
T 1dqn_A 190 GLRRGWAHLFDINLSE 205 (230)
T ss_dssp TBCTTCCSEEESSSCH
T ss_pred HhhCCCCcEEEECccc
Confidence 9999999999999874
No 16
>2xbu_A Hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage, FLIP pepti; HET: 5GP; 1.80A {Saccharomyces cerevisiae} PDB: 2jkz_A* 2jky_A*
Probab=99.75 E-value=1.8e-18 Score=125.43 Aligned_cols=69 Identities=25% Similarity=0.337 Sum_probs=60.0
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHh--------CCC---------CEEEEEEEEEcCCCce--ec---eee--cCcc
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVS--------KGA---------SSVSVCTLLDKPARRK--IQ---VEL--VGEG 56 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~--------~g~---------~~i~~~~l~~k~~~~~--~~---~~p--D~~~ 56 (95)
++||+|||||||++||+||.++++.|++ +|+ +++++|||++|+.+++ ++ ++| |
T Consensus 101 v~Gk~VLIVDDIidTG~Tl~aa~~~L~~~ga~~~~~~g~~~~~~~~~~~~v~iavL~~K~~~~~~~~p~~~i~~~~D--- 177 (221)
T 2xbu_A 101 LVGKNVLIVDEVDDTRTTLHYALSELEKDAAEQAKAKGIDTEKSPEMKTNFGIFVLHDKQKPKKADLPAEMLNDKNR--- 177 (221)
T ss_dssp CTTCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTCCTTTCGGGSCEEEEEEEEEECSCCSSCCCHHHHTCTTT---
T ss_pred CCCCEEEEEeccCCcHHHHHHHHHHHHhhcchhhhhcCccccccccCcceEEEEEEEeccccccccCCccccCCCCC---
Confidence 4689999999999999999999999996 786 6999999999997665 45 777 9
Q ss_pred CeEEEEEe-CCEEEEeecCC
Q 034410 57 KFYRGFEC-PDYFVVGYGMD 75 (95)
Q Consensus 57 ~~y~g~~i-~~~~vvgygld 75 (95)
|+|+++ ||.||| |.|+
T Consensus 178 --y~g~~i~~d~wIv-fPWe 194 (221)
T 2xbu_A 178 --YFAAKTVPDKWYA-YPWE 194 (221)
T ss_dssp --EEEEEEECSCCEE-CGGG
T ss_pred --EEEEEeCCCCEEE-cCCC
Confidence 999999 899987 6555
No 17
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=99.74 E-value=3.6e-18 Score=115.60 Aligned_cols=63 Identities=25% Similarity=0.338 Sum_probs=57.6
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCCCceeceeecCccCeEEEEEeCCEEEEee
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGY 72 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~~~~~~~~pD~~~~~y~g~~i~~~~vvgy 72 (95)
+|++||||||+++||+|+.++++.|+++|++++.+++++.++.++. .|| |+|+++|++++++|
T Consensus 82 ~gk~VllVDDvitTG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~~~~---~~d-----y~g~~~~~~~vfpW 144 (153)
T 1vdm_A 82 KDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKIACLAMKPWTSV---VPD-----YYVFRTEKWIVFPW 144 (153)
T ss_dssp BTCEEEEEEEEESSCHHHHHHHHHHHTTTBSEEEEEEEEECTTCSS---CCS-----BBCEECSSEEECTT
T ss_pred CCCEEEEEecccCChHHHHHHHHHHHHcCCCEEEEEEEEeCCCCCC---Cce-----EEEEecCCeEEeCC
Confidence 6899999999999999999999999999999999999999997753 499 99999999777655
No 18
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*
Probab=99.66 E-value=2.4e-16 Score=109.49 Aligned_cols=63 Identities=27% Similarity=0.400 Sum_probs=57.6
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCC-CCEEEEEEEEEcCCCceeceeecCccCeEEEEEeCC---EEE
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKG-ASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPD---YFV 69 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g-~~~i~~~~l~~k~~~~~~~~~pD~~~~~y~g~~i~~---~~v 69 (95)
++|++|||||||++||+||.++++.|+++| ++++.+++++.|+ ++..++.|| |+|+++|+ +||
T Consensus 96 ~~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~k~-~~~~~~~~d-----y~g~~ip~~~~e~v 162 (181)
T 1a3c_A 96 ITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRG-HRELPIRAD-----YIGKNIPTSKSEKV 162 (181)
T ss_dssp CTTSEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC-CCSSSCCCS-----EEEEECCCCSSCEE
T ss_pred CCCCEEEEEeCccCcHHHHHHHHHHHHhcCCCcEEEEEEEEccC-CCcCCCCcc-----EEEEECCCCccceE
Confidence 368999999999999999999999999997 9999999999998 567789999 99999984 566
No 19
>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.65 E-value=4e-16 Score=108.64 Aligned_cols=64 Identities=20% Similarity=0.357 Sum_probs=58.2
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCC-CCEEEEEEEEEcCCCceeceeecCccCeEEEEEeC---CEEEE
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKG-ASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECP---DYFVV 70 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g-~~~i~~~~l~~k~~~~~~~~~pD~~~~~y~g~~i~---~~~vv 70 (95)
++|++|||||||++||+||.++.+.|+++| ++++.+++++.++ .++.++.|| |+|+++| ++||-
T Consensus 94 ~~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~~~-~~~~~~~~d-----~~g~~i~~~~~~~v~ 161 (181)
T 1ufr_A 94 LTGKAIVLVDDVLYTGRTARAALDALIDLGRPRRIYLAVLVDRG-HRELPIRAD-----FVGKNVPTSRSEVVK 161 (181)
T ss_dssp CTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC-CCSSSBCCS-----EEEEECCCCTTCEEE
T ss_pred CCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCcEEEEEEEEcCC-CCcCCccCc-----EEEEeCCCCccCEEE
Confidence 368999999999999999999999999999 9999999999998 556789999 9999997 46774
No 20
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.65 E-value=7.1e-17 Score=114.91 Aligned_cols=75 Identities=17% Similarity=0.225 Sum_probs=66.0
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCCCce--eceeecCccCeEEEEEeCCEEEEeecCChhH
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRK--IQVELVGEGKFYRGFECPDYFVVGYGMDFAE 78 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~~~~--~~~~pD~~~~~y~g~~i~~~~vvgygld~~~ 78 (95)
++||+||||||+++||.||.++++.|+++||++|.+|+++.++...+ .+.. + |+++.+|+.|+ |+.+
T Consensus 118 ~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~V~v~~~v~~~~~~~~l~~~~-~-----~v~~~~~~~f~-----~v~~ 186 (208)
T 1wd5_A 118 RKGRDVVLVDDGVATGASMEAALSVVFQEGPRRVVVAVPVASPEAVERLKARA-E-----VVALSVPQDFA-----AVGA 186 (208)
T ss_dssp CTTSEEEEECSCBSSCHHHHHHHHHHHTTCCSEEEEEEEEBCHHHHHHHHTTS-E-----EEEEECCTTCC-----CGGG
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHHHHcCCCEEEEEEEEcCHHHHHHhcccC-c-----EEEEecCcchh-----hHHH
Confidence 46899999999999999999999999999999999999988874332 2445 8 99999999885 9999
Q ss_pred hhhCCCce
Q 034410 79 LYRNLPYV 86 (95)
Q Consensus 79 ~~R~l~~v 86 (95)
.|||+|++
T Consensus 187 ~y~~~~~~ 194 (208)
T 1wd5_A 187 YYLDFGEV 194 (208)
T ss_dssp GBSCCCCC
T ss_pred HhcCCCCC
Confidence 99999976
No 21
>1nul_A XPRT, xanthine-guanine phosphoribosyltransferase; purine salvage enzym; 1.80A {Escherichia coli} SCOP: c.61.1.1 PDB: 1a96_A* 1a95_A 1a98_A 1a97_A*
Probab=99.64 E-value=5.4e-17 Score=111.07 Aligned_cols=69 Identities=20% Similarity=0.196 Sum_probs=60.0
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCCCceeceeecCccCeEEEEEeC-CEEEEeecCChhHh
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECP-DYFVVGYGMDFAEL 79 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~~~~~~~~pD~~~~~y~g~~i~-~~~vvgygld~~~~ 79 (95)
++||+|||||||++||+||.++++.|++ +++|+|++|+.++ ..|| |+|+++| +.||+ |.|++.|.
T Consensus 79 ~~gk~VliVDDii~TG~Tl~~a~~~l~~-----v~~a~L~~k~~~~---~~pD-----y~~~~~~~~~wi~-fpW~~~~~ 144 (152)
T 1nul_A 79 GDGEGFIVIDDLVDTGGTAVAIREMYPK-----AHFVTIFAKPAGR---PLVD-----DYVVDIPQDTWIE-QPWDMGVV 144 (152)
T ss_dssp SCCTTEEEEEEEECTTSSHHHHHHHCTT-----SEEEEEEECGGGG---GGCS-----EEEEECCTTCEEE-CGGGCCCC
T ss_pred CCcCEEEEEEeecCchHHHHHHHHHHhh-----CCEEEEEECCCCc---cCCc-----EEEEEcCCCCEEE-cCCcCccc
Confidence 3689999999999999999999999975 8999999998665 4599 9999998 56655 99999998
Q ss_pred hhCC
Q 034410 80 YRNL 83 (95)
Q Consensus 80 ~R~l 83 (95)
|+..
T Consensus 145 ~~~~ 148 (152)
T 1nul_A 145 FVPP 148 (152)
T ss_dssp CCCC
T ss_pred ccCC
Confidence 8764
No 22
>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} SCOP: c.61.1.1
Probab=99.62 E-value=1.1e-15 Score=109.02 Aligned_cols=64 Identities=23% Similarity=0.388 Sum_probs=57.4
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCC-CCEEEEEEEEEcCCCceeceeecCccCeEEEEEeC---CEEEE
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKG-ASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECP---DYFVV 70 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g-~~~i~~~~l~~k~~~~~~~~~pD~~~~~y~g~~i~---~~~vv 70 (95)
++||+|||||||++||+||.++++.|+++| |++|++|+|++|+. ++.++.|| |+|+++| +++|.
T Consensus 110 ~~gk~VlLVDDVitTG~Tl~aa~~~L~~~G~a~~V~vavlv~k~~-~~~pi~~d-----y~g~~ip~~~~e~v~ 177 (201)
T 1w30_A 110 IDDALVILVDDVLYSGRSVRSALDALRDVGRPRAVQLAVLVDRGH-RELPLRAD-----YVGKNVPTSRSESVH 177 (201)
T ss_dssp STTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECCC-CSSSBCCS-----EEEEECCCCTTCEEE
T ss_pred CCCCEEEEECCccchHHHHHHHHHHHHhCCCCcEEEEEEEEecCC-CcCCCCCc-----EEEEECCCCCCCEEE
Confidence 368999999999999999999999999999 99999999999974 56789999 9999997 35653
No 23
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=99.54 E-value=7.8e-16 Score=122.32 Aligned_cols=78 Identities=17% Similarity=0.153 Sum_probs=67.0
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCCCceecee-ecCccCeEEEEEeCCE-EEEeecCChhH
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVE-LVGEGKFYRGFECPDY-FVVGYGMDFAE 78 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~~~~~~~~-pD~~~~~y~g~~i~~~-~vvgygld~~~ 78 (95)
++||+||||||+++||.|+.++++.|+++||++|.+++++ .++. |+ |+|+++|+. ++|+|++|++|
T Consensus 357 v~Gk~VllVDDii~TG~Tl~~~~~~L~~~Ga~~V~~~~l~-------~~~~~p~-----~~gi~~~~~~~lv~~~~~~~e 424 (504)
T 1ecf_A 357 FRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAA-------PEIRFPN-----VYGIDMPSATELIAHGREVDE 424 (504)
T ss_dssp TTTCCEEEEESCCSSSHHHHHHHHHHHHTTCSSEEEEESS-------CCCCSCC-----CSSCCCCCGGGCTTTTCCHHH
T ss_pred CCCCeEEEEeccccccHHHHHHHHHHHhcCCcEEEEEEEe-------cCcccCC-----eEEEEcCChHHeEEcCCCHHH
Confidence 4789999999999999999999999999999999999885 1244 99 999999987 99999999999
Q ss_pred hhhC--CCceeecC
Q 034410 79 LYRN--LPYVGVLK 90 (95)
Q Consensus 79 ~~R~--l~~v~~l~ 90 (95)
.+|+ .+.+..++
T Consensus 425 ~~~~~~~~~l~~~s 438 (504)
T 1ecf_A 425 IRQIIGADGLIFQD 438 (504)
T ss_dssp HHHHHTCSEEEECC
T ss_pred HHHHcCCCEEEEEc
Confidence 8884 45555443
No 24
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.31 E-value=4.6e-12 Score=87.18 Aligned_cols=44 Identities=16% Similarity=0.237 Sum_probs=42.0
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCCC
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPAR 45 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~~ 45 (95)
+|++|||||||++||+|+.++++.|+++|++++.+++|++++..
T Consensus 119 ~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~V~~~~l~~~~~~ 162 (175)
T 1vch_A 119 LNQRVVLVSDVVASGETMRAMEKMVLRAGGHVVARLAVFRQGTP 162 (175)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECSCC
T ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCeEEEEEEEEecCCC
Confidence 68999999999999999999999999999999999999998764
No 25
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}
Probab=99.25 E-value=1.3e-11 Score=85.93 Aligned_cols=45 Identities=24% Similarity=0.259 Sum_probs=42.1
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCCC
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPAR 45 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~~ 45 (95)
++|++|||||||++||+|+.++++.|+++|++.+.++++++|+..
T Consensus 104 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~r~~~ 148 (178)
T 2yzk_A 104 PPKGRVVVVDDVATTGTSIAKSIEVLRSNGYTVGTALVLVDRGEG 148 (178)
T ss_dssp CCSSEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCSS
T ss_pred CCCCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCcC
Confidence 368999999999999999999999999999999999999998753
No 26
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=99.24 E-value=1.6e-11 Score=85.83 Aligned_cols=43 Identities=14% Similarity=0.045 Sum_probs=41.4
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCC
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPA 44 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~ 44 (95)
+|++|||||||++||+|+.++++.|+++|++.+.++++++++.
T Consensus 121 ~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~ 163 (187)
T 1g2q_A 121 AGSNVIIVDDIIATGGSAAAAGELVEQLEANLLEYNFVMELDF 163 (187)
T ss_dssp TTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCC
T ss_pred CcCEEEEECCCcccHHHHHHHHHHHHHcCCeEEEEEEEEEccC
Confidence 6899999999999999999999999999999999999999985
No 27
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=99.23 E-value=1.7e-11 Score=86.05 Aligned_cols=43 Identities=16% Similarity=0.265 Sum_probs=41.1
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCC
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPA 44 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~ 44 (95)
+|++|||||||++||+||.++++.|+++|++.+.+++++.++.
T Consensus 119 ~gk~VllVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~ 161 (197)
T 1y0b_A 119 DQDHVLIIDDFLANGQAAHGLVSIVKQAGASIAGIGIVIEKSF 161 (197)
T ss_dssp TTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEETT
T ss_pred CcCEEEEEEcccccCHHHHHHHHHHHHCCCEEEEEEEEEEecc
Confidence 6899999999999999999999999999999999999999973
No 28
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*
Probab=99.22 E-value=1.6e-11 Score=85.90 Aligned_cols=43 Identities=21% Similarity=0.233 Sum_probs=41.4
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCC--EEEEEEEEEcCC
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGAS--SVSVCTLLDKPA 44 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~--~i~~~~l~~k~~ 44 (95)
+|++|||||||++||+|+.++++.|+++|++ .+.++++++++.
T Consensus 116 ~gk~VLLVDDVitTG~Tl~aa~~~L~~~Ga~~~~V~~~~l~~k~~ 160 (186)
T 1l1q_A 116 PHDVVLLHDDVLATGGTLLAAIELCETAGVKPENIYINVLYEIEA 160 (186)
T ss_dssp TTCCEEEEEEEESSSHHHHHHHHHHHHTTCCGGGEEEEEEEECGG
T ss_pred CcCEEEEEecccccHHHHHHHHHHHHHcCCCcceEEEEEEEEccC
Confidence 6899999999999999999999999999999 999999999975
No 29
>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}
Probab=99.20 E-value=2e-11 Score=85.30 Aligned_cols=45 Identities=27% Similarity=0.306 Sum_probs=41.4
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCCC
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPAR 45 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~~ 45 (95)
.+|++|||||||++||+|+.++++.|+++|++.+.++++++++..
T Consensus 112 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~~ 156 (180)
T 2p1z_A 112 VVGKKVLVVEDTTTTGNSPLTAVKALREAGAEVVGVATVVDRATG 156 (180)
T ss_dssp CTTCEEEEEEEECSSSHHHHHHHHHHHHHTCEEEEEEEEEC-CCC
T ss_pred CCcCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCcc
Confidence 368999999999999999999999999999999999999999854
No 30
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=99.20 E-value=2.6e-11 Score=84.99 Aligned_cols=43 Identities=14% Similarity=0.166 Sum_probs=41.0
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCC
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPA 44 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~ 44 (95)
+|++|||||||++||+|+.++++.|+++|++.+.+++++.++.
T Consensus 125 ~gk~VLlVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~ 167 (190)
T 2dy0_A 125 PGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFD 167 (190)
T ss_dssp TTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEEGG
T ss_pred CcCEEEEEEccccchHHHHHHHHHHHHcCCEEEEEEEEEEccC
Confidence 6899999999999999999999999999999999999999863
No 31
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=99.20 E-value=2.6e-11 Score=83.96 Aligned_cols=43 Identities=19% Similarity=0.201 Sum_probs=41.2
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCC
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPA 44 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~ 44 (95)
+|++||||||+++||+|+.++++.|+++|++.+.+++++.++.
T Consensus 119 ~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~ 161 (180)
T 1zn8_A 119 PGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTS 161 (180)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEEEGG
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHcCCEEEEEEEEEEccC
Confidence 6899999999999999999999999999999999999999875
No 32
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=99.14 E-value=8.8e-12 Score=97.86 Aligned_cols=78 Identities=18% Similarity=0.194 Sum_probs=63.0
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCCCceeceeecCccCeEEEEEeCCE-EEEeecCChhHh-
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDY-FVVGYGMDFAEL- 79 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~~~~~~~~pD~~~~~y~g~~i~~~-~vvgygld~~~~- 79 (95)
+||+||||||+++||.|+.++++.|+++||++|.++++. +|- ..|+ |+|+++|+. .++++++++++.
T Consensus 337 ~gk~VlLVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~-pp~-----~~~~-----~~gid~~~~~~li~~~~~~~~i~ 405 (459)
T 1ao0_A 337 EGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVKISS-PPI-----AHPC-----FYGIDTSTHEELIASSHSVEEIR 405 (459)
T ss_dssp TTCEEEEEESCCSSSHHHHHHHHHHHHTTCSEEEEEESS-CCC-----CSCC-----CSCTTTCCSSCCSTTTSCHHHHH
T ss_pred CCCeEEEEeeeecCHHHHHHHHHHHHHcCCCEEEEEEec-CCc-----cccc-----eeeecCCCHHHhhccCCCHHHHH
Confidence 689999999999999999999999999999999999876 221 4688 999887754 788899998874
Q ss_pred -hhCCCceeecC
Q 034410 80 -YRNLPYVGVLK 90 (95)
Q Consensus 80 -~R~l~~v~~l~ 90 (95)
.-+.+.+..++
T Consensus 406 ~~~~~~~l~~~s 417 (459)
T 1ao0_A 406 QEIGADTLSFLS 417 (459)
T ss_dssp HHHTCSEEEECC
T ss_pred HHhCcCEEEEEc
Confidence 33555555443
No 33
>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A*
Probab=99.14 E-value=7.9e-11 Score=84.89 Aligned_cols=45 Identities=13% Similarity=0.220 Sum_probs=42.3
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCCC
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPAR 45 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~~ 45 (95)
++|++|||||||++||+|+.++++.|+++|++.+.++++++++..
T Consensus 123 i~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~dr~~~ 167 (226)
T 2ps1_A 123 LENKRILIIDDVMTAGTAINEAFEIISNAKGQVVGSIIALDRQEV 167 (226)
T ss_dssp CTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCBB
T ss_pred CCcCEEEEEEecccChHHHHHHHHHHHHcCCeEEEEEEEEEccCc
Confidence 368999999999999999999999999999999999999999853
No 34
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=99.12 E-value=1.2e-10 Score=82.86 Aligned_cols=43 Identities=19% Similarity=0.289 Sum_probs=41.0
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcC
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKP 43 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~ 43 (95)
.+|++||||||+++||+|+.++++.|+++|++.+.+++++.++
T Consensus 115 ~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~~~~ 157 (211)
T 2aee_A 115 LKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIFTYE 157 (211)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECC
T ss_pred CCcCEEEEEeecccchHHHHHHHHHHHHCCCcEEEEEEEEecc
Confidence 3689999999999999999999999999999999999999987
No 35
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=99.07 E-value=1.6e-10 Score=82.15 Aligned_cols=42 Identities=24% Similarity=0.408 Sum_probs=40.6
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcC
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKP 43 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~ 43 (95)
+|++||||||+++||+|+.++++.|+++|++.+.+++++.+.
T Consensus 110 ~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~~~~l~~~~ 151 (205)
T 2wns_A 110 PGETCLIIEDVVTSGSSVLETVEVLQKEGLKVTDAIVLLDRE 151 (205)
T ss_dssp TTCBEEEEEEEESSSHHHHHHHHHHHHTTCBCCEEEEEEECC
T ss_pred CCCEEEEEEEeccccHHHHHHHHHHHHCCCEEEEEEEEEEcC
Confidence 689999999999999999999999999999999999999986
No 36
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=99.07 E-value=2e-10 Score=83.48 Aligned_cols=43 Identities=21% Similarity=0.237 Sum_probs=41.2
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCC
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPA 44 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~ 44 (95)
+|++||||||+++||+|+.++++.|+++|++.+.+++++.+..
T Consensus 137 ~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~~~~~ 179 (236)
T 1qb7_A 137 KGSRVVLIDDVLATGGTALSGLQLVEASDAVVVEMVSILSIPF 179 (236)
T ss_dssp TTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECGG
T ss_pred CcCEEEEEecccccHHHHHHHHHHHHHcCCeEEEEEEEEEccc
Confidence 6899999999999999999999999999999999999999874
No 37
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=99.02 E-value=2.5e-10 Score=81.70 Aligned_cols=43 Identities=21% Similarity=0.371 Sum_probs=40.8
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCC
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPA 44 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~ 44 (95)
++| +||||||+++||+|+.++++.|+++|++.+.++++++++.
T Consensus 116 ~~g-~VliVDDvitTG~Tl~~a~~~l~~~Ga~~v~v~~l~dr~~ 158 (213)
T 1lh0_A 116 LQG-RVMLVDDVITAGTAIRESMEIIQAHGATLAGVLISLDRQE 158 (213)
T ss_dssp CCS-EEEEECSCCSSSCHHHHHHHHHHHTTCEEEEEEEEEECCB
T ss_pred CCC-CEEEEEecccchHHHHHHHHHHHHCCCeEEEEEEEEEccc
Confidence 368 9999999999999999999999999999999999999985
No 38
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=99.01 E-value=4e-10 Score=82.43 Aligned_cols=44 Identities=18% Similarity=0.221 Sum_probs=41.7
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCC
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPA 44 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~ 44 (95)
++|++||||||+++||+|+.++++.|+++|++.+.+++++++..
T Consensus 134 ~~Gk~VLIVDDVitTG~Tl~~a~~~L~~~Ga~vv~v~vlvdr~e 177 (232)
T 3mjd_A 134 MTNKKVLLIDDVMTAGTAFYESYNKLKIINAKIAGVVLSIDRQE 177 (232)
T ss_dssp CTTCEEEEECSCCSSSHHHHHHHHHHHTTTCEEEEEEEEEECCB
T ss_pred CCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECCc
Confidence 36899999999999999999999999999999999999999875
No 39
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=99.00 E-value=9.5e-11 Score=88.84 Aligned_cols=62 Identities=24% Similarity=0.358 Sum_probs=49.7
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEE---EEEcCCCceec-eeecCccCeEEEEEeC
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCT---LLDKPARRKIQ-VELVGEGKFYRGFECP 65 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~---l~~k~~~~~~~-~~pD~~~~~y~g~~i~ 65 (95)
++||+|||||||++||+|+.++++.|+++|+++|.+++ ++.+++..++. ..+| .+++..++|
T Consensus 215 v~gk~VlLVDDiitTG~Tl~~aa~~Lk~~Ga~~V~~~~tH~v~~~~a~~~l~~~~i~---~vv~t~tip 280 (317)
T 1dku_A 215 IEGKTAILIDDIIDTAGTITLAANALVENGAKEVYACCTHPVLSGPAVERINNSTIK---ELVVTNSIK 280 (317)
T ss_dssp CTTCEEEEECSEESSCHHHHHHHHHHHHTTCSEEEEECSEECCCTTHHHHHHTSSEE---EEEEETTSC
T ss_pred CCCCEEEEEecccCCCHHHHHHHHHHHHcCCcEEEEEEECcccChHHHHHHhhCCCC---EEEEeCCcC
Confidence 47899999999999999999999999999999999999 88887654442 2334 335555555
No 40
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*
Probab=98.99 E-value=1e-09 Score=82.24 Aligned_cols=44 Identities=16% Similarity=0.206 Sum_probs=42.0
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCCC
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPAR 45 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~~ 45 (95)
+|++||||||+++||+|+.++++.|+++|++.+.+++++++...
T Consensus 195 ~Gk~VLIVDDViTTG~Tl~~a~~~L~~aGA~vV~v~vlvdr~~~ 238 (291)
T 1o57_A 195 TGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLVEAEGV 238 (291)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHTGGGTCEEEEEEEEEEESSC
T ss_pred CcCEEEEEEEEcCcHHHHHHHHHHHHHCCCEEEEEEEEEEcCcc
Confidence 68999999999999999999999999999999999999998865
No 41
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=98.97 E-value=1.1e-09 Score=80.23 Aligned_cols=42 Identities=17% Similarity=0.294 Sum_probs=40.4
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcC
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKP 43 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~ 43 (95)
+|++||||||+++||+|+.++++.|+++|++.+.+++++++.
T Consensus 136 ~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~~~~ 177 (234)
T 3m3h_A 136 KGQKVVVVEDLISTGGSAITCVEALREAGCEVLGIVSIFTYE 177 (234)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECC
T ss_pred CCCEEEEEecccchhHHHHHHHHHHHHCCCEEEEEEEEEECc
Confidence 689999999999999999999999999999999999999985
No 42
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=98.95 E-value=1.3e-09 Score=80.23 Aligned_cols=42 Identities=19% Similarity=0.301 Sum_probs=40.3
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcC
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKP 43 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~ 43 (95)
+|++||||||+++||+|+.++++.|+++|++.+.+++++++.
T Consensus 148 ~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~d~~ 189 (243)
T 3dez_A 148 KGQKMVIIEDLISTGGSVLDAVAAAQREGADVLGVVAIFTYE 189 (243)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECC
T ss_pred CCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECC
Confidence 689999999999999999999999999999999999999975
No 43
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=98.93 E-value=1.2e-09 Score=81.53 Aligned_cols=40 Identities=23% Similarity=0.296 Sum_probs=37.5
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEE
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLL 40 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~ 40 (95)
++||+|||||||+|||+|+.++++.|+++|++++.+++++
T Consensus 203 v~Gk~VlIVDDii~TG~Tl~~aa~~Lk~~Ga~~V~~~~~h 242 (284)
T 1u9y_A 203 AKDRDVFIVDDIISTGGTMATAVKLLKEQGAKKIIAACVH 242 (284)
T ss_dssp CTTCCEEEEEEECSSSHHHHHHHHHHHHTTCCSEEEEEEE
T ss_pred CCCCEEEEEecccCchHHHHHHHHHHHHCCCcEEEEEEEe
Confidence 3689999999999999999999999999999999999963
No 44
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1
Probab=98.91 E-value=8.5e-10 Score=79.14 Aligned_cols=44 Identities=23% Similarity=0.321 Sum_probs=41.0
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCC
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPA 44 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~ 44 (95)
++|++||||||+++||+|+.++++.|+++|+++|++++++.++.
T Consensus 122 i~~~~VllvDd~l~TG~T~~~a~~~L~~~G~~~I~~~~lv~~~~ 165 (209)
T 1i5e_A 122 VEERDFIIVDPMLATGGSAVAAIDALKKRGAKSIKFMCLIAAPE 165 (209)
T ss_dssp TTTSEEEEECSEESSSHHHHHHHHHHHHTTCCCEEEECSEECHH
T ss_pred cCCCEEEEEcCCCcCHHHHHHHHHHHHHcCCCEEEEEEEEECHH
Confidence 46899999999999999999999999999999999999888764
No 45
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=98.90 E-value=5.3e-10 Score=85.48 Aligned_cols=48 Identities=27% Similarity=0.380 Sum_probs=41.4
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEE---EEEcCCCcee
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCT---LLDKPARRKI 48 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~---l~~k~~~~~~ 48 (95)
++||+|+||||+++||+|+.++++.|+++|++++.+++ ++.+++..++
T Consensus 211 v~gk~viIVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~v~~~~a~e~l 261 (326)
T 3s5j_B 211 VKDRVAILVDDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISRI 261 (326)
T ss_dssp CTTSEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECCCTTHHHHH
T ss_pred CCCCEEEEEccccCCcHHHHHHHHHHHHcCCCEEEEEEEecccCchHHHHH
Confidence 47999999999999999999999999999999999999 4555554443
No 46
>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus}
Probab=98.90 E-value=1.8e-09 Score=77.89 Aligned_cols=45 Identities=13% Similarity=0.268 Sum_probs=42.0
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCCC
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPAR 45 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~~ 45 (95)
++||+|+||||+++||+|+.++++.|+++||++|++|+++.++..
T Consensus 119 i~~r~vilvDd~laTG~T~~~ai~~L~~~G~~~I~~~~lv~~~~g 163 (208)
T 2e55_A 119 LKGKIVVILDPMLATGGTLEVALREILKHSPLKVKSVHAIAAPEG 163 (208)
T ss_dssp CBTSEEEEECSEESSSHHHHHHHHHHHTTCBSEEEEEEEEECHHH
T ss_pred CCCCEEEEECCccccHHHHHHHHHHHHHcCCCEEEEEEEEECHHH
Confidence 478999999999999999999999999999999999999988743
No 47
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=98.88 E-value=7.4e-10 Score=85.88 Aligned_cols=62 Identities=23% Similarity=0.289 Sum_probs=47.8
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEE---EEEcCCCceec-eeecCccCeEEEEEeC
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCT---LLDKPARRKIQ-VELVGEGKFYRGFECP 65 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~---l~~k~~~~~~~-~~pD~~~~~y~g~~i~ 65 (95)
.+||+||||||+++||+|+.++++.|++.|+++|.+++ ++.+++.+++. -..| .+++..++|
T Consensus 270 v~Gk~viiVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~v~s~~a~~~l~~s~id---~vvvTntip 335 (379)
T 2ji4_A 270 VGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRRIEESAID---EVVVTNTIP 335 (379)
T ss_dssp CTTSEEEEEEEEECSCHHHHHHHHHHHHTTCCEEEEEEEEECCCTTHHHHHHHSSCC---EEEEESSSC
T ss_pred CCCCEEEEEecCCCchHHHHHHHHHHHhcCCCEEEEEEEeecCCcHHHHHHHhCCCC---EEEEecCCC
Confidence 36899999999999999999999999999999999998 55666554442 2334 345555554
No 48
>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli}
Probab=98.87 E-value=2.3e-09 Score=77.31 Aligned_cols=46 Identities=24% Similarity=0.336 Sum_probs=42.2
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCCCc
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARR 46 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~~~ 46 (95)
++||.|+||||+++||+|+.++++.|+++|+++|++|+++.++...
T Consensus 121 i~~r~VilvDd~laTG~T~~~ai~~L~~~G~~~I~~~~lv~~p~g~ 166 (208)
T 2ehj_A 121 IDERMALIVDPMLATGGSVIATIDLLKKAGCSSIKVLVLVAAPEGI 166 (208)
T ss_dssp GGGCEEEEEEEEESSCHHHHHHHHHHHHTTCCEEEEEEEEECHHHH
T ss_pred cCCCEEEEECCccccHHHHHHHHHHHHHcCCCEEEEEEEEeCHHHH
Confidence 3689999999999999999999999999999999999999887543
No 49
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1
Probab=98.84 E-value=2.6e-09 Score=77.82 Aligned_cols=45 Identities=18% Similarity=0.257 Sum_probs=41.8
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCCC
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPAR 45 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~~ 45 (95)
++||.|+||||+++||+|+.++++.|+++|+++|++|+++.++..
T Consensus 134 i~gr~VilvDd~laTG~Tl~~ai~~L~~~G~~~I~~~~lv~~~~g 178 (221)
T 1o5o_A 134 NDDKEVFLLDPMLATGVSSIKAIEILKENGAKKITLVALIAAPEG 178 (221)
T ss_dssp CTTCEEEEECSEESSSHHHHHHHHHHHHTTCCEEEEECSEECHHH
T ss_pred cCCCEEEEECCccccHHHHHHHHHHHHHcCCCEEEEEEEEeCHHH
Confidence 478999999999999999999999999999999999998887643
No 50
>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1
Probab=98.83 E-value=2.1e-09 Score=77.55 Aligned_cols=46 Identities=20% Similarity=0.290 Sum_probs=42.1
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCCCc
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARR 46 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~~~ 46 (95)
++||.|+||||+++||+|+.++++.|+++||++|++|+++.++...
T Consensus 121 i~~r~vilvDd~laTG~T~~~ai~~L~~~G~~~I~~~~lv~~~~g~ 166 (208)
T 1v9s_A 121 IAERRAFLLDPMLATGGSASLALSLLKERGATGVKLMAILAAPEGL 166 (208)
T ss_dssp GGGSCEEEECSEESSSHHHHHHHHHHHHTTCCSCEEEEEEECHHHH
T ss_pred cCCCEEEEECCccccHHHHHHHHHHHHHcCCCEEEEEEEEeCHHHH
Confidence 3689999999999999999999999999999999999999887543
No 51
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=98.82 E-value=6.9e-09 Score=77.88 Aligned_cols=63 Identities=22% Similarity=0.186 Sum_probs=48.1
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEc---CCCceeceeecCccCeEEEEEeCC
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDK---PARRKIQVELVGEGKFYRGFECPD 66 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k---~~~~~~~~~pD~~~~~y~g~~i~~ 66 (95)
++||+||||||+++||+|+.++.+.|+++|++.+.+++.+-. ++..+++-. ..++++..++|.
T Consensus 201 v~gk~vliVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~th~v~s~~a~~~l~s~---i~~vv~Tntip~ 266 (286)
T 3lrt_A 201 VNGKKLLIVDDIISTGGTIAKSSGLLREKGASKIYVSAVHGLFVNGSENKILQN---ADEIHVTDTVES 266 (286)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECCCTTHHHHHTTT---CSEEEEESSSCS
T ss_pred CCcCEEEEEeccccccHHHHHHHHHHHhCCCCEEEEEEEEeecCchHHHHHHcC---CCEEEEecCCCC
Confidence 368999999999999999999999999999999999996653 333333111 225566666764
No 52
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=98.77 E-value=1e-08 Score=78.09 Aligned_cols=62 Identities=24% Similarity=0.258 Sum_probs=46.1
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEE---EcCCCceec-eeecCccCeEEEEEeC
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLL---DKPARRKIQ-VELVGEGKFYRGFECP 65 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~---~k~~~~~~~-~~pD~~~~~y~g~~i~ 65 (95)
++||+|+||||+++||+|+.++++.|+++|++++.+++.+ .+++..++. -..| .+++..++|
T Consensus 214 v~gk~viiVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~v~s~~a~~~l~~~~i~---~vv~t~tip 279 (319)
T 3dah_A 214 VEGRTCVIMDDMVDTAGTLCKAAQVLKERGAKQVFAYATHPVLSGGAADRIAASALD---ELVVTDTIP 279 (319)
T ss_dssp -CCSEEEEEEEEESSCHHHHHHHHHHHHTTCSCEEEEEEEECCCTTHHHHHHTSSCS---EEEEESSSC
T ss_pred CCCCEEEEEecccCchHHHHHHHHHHHHcCCCEEEEEEEeecCChHHHHHHHhCCCC---EEEEecccc
Confidence 3689999999999999999999999999999999999954 444433332 2233 335554554
No 53
>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}
Probab=98.75 E-value=1.2e-08 Score=74.98 Aligned_cols=42 Identities=17% Similarity=0.285 Sum_probs=40.0
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCC
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPA 44 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~ 44 (95)
+| +||||||+++||+|+.++++.|+++|++.+.+++++++..
T Consensus 142 ~G-~VliVDDvitTG~T~~~a~~~l~~~Ga~vv~v~vlvdr~e 183 (238)
T 3n2l_A 142 EG-RVMLVDDVITAGTAIRESMELIQANKADLAGVLVAIDRQE 183 (238)
T ss_dssp CS-EEEEECSCCSSSHHHHHHHHHHHHTTCEEEEEEEEEECCC
T ss_pred CC-cEEEEeeeecccHHHHHHHHHHHHcCCEEEEEEEEEEccc
Confidence 68 9999999999999999999999999999999999999874
No 54
>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D*
Probab=98.67 E-value=1.2e-08 Score=75.19 Aligned_cols=45 Identities=13% Similarity=0.244 Sum_probs=41.5
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCC--CEEEEEEEEEcCCC
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGA--SSVSVCTLLDKPAR 45 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~--~~i~~~~l~~k~~~ 45 (95)
++||.|+||||+++||+|+.++++.|+++|+ ++|++++++.++..
T Consensus 154 i~~r~VilvDdmlaTG~T~~~ai~~L~~~G~~p~~I~~~~lvaap~g 200 (243)
T 1bd3_D 154 IRERWVMLLDPMCATAGSVCKAIEVLLRLGVKEERIIFVNILAAPQG 200 (243)
T ss_dssp GGGSEEEEECSEESSCHHHHHHHHHHHHHTCCGGGEEEEEEEECHHH
T ss_pred cCCCEEEEECCccccHHHHHHHHHHHHHcCCCcceEEEEEEEeCHHH
Confidence 4689999999999999999999999999999 99999999988744
No 55
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=98.62 E-value=3.1e-08 Score=78.28 Aligned_cols=43 Identities=30% Similarity=0.375 Sum_probs=40.2
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCC
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPA 44 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~ 44 (95)
+|++||||||+++||+|+.++++.|+++|++.+.+++++++..
T Consensus 364 ~G~~VliVDDvitTG~T~~~~~~~l~~~g~~vv~v~~lvdr~~ 406 (453)
T 3qw4_B 364 KGDRVVIIDDLVSTGETKVEAIEKLRSAGLEVVSIVVLVDRDM 406 (453)
T ss_dssp TTCEEEEEEEEECC-CCHHHHHHHHHTTTCEEEEEEEEEECSS
T ss_pred CCCEEEEEeeeechhHHHHHHHHHHHHcCCEEEEEEEEEECCc
Confidence 6899999999999999999999999999999999999999874
No 56
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1
Probab=98.46 E-value=1.1e-07 Score=69.08 Aligned_cols=44 Identities=18% Similarity=0.295 Sum_probs=40.4
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCC--CEEEEEEEEEcCC
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGA--SSVSVCTLLDKPA 44 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~--~~i~~~~l~~k~~ 44 (95)
+++++|+|+||++.||+|+.++++.|+++|+ ++|++++++..+.
T Consensus 127 i~~~~VilvD~~laTG~T~~~ai~~L~~~G~pe~~I~~~~~vaa~e 172 (217)
T 3dmp_A 127 LEDRIFILCDPMVATGYSAAHAIDVLKRRGVPGERLMFLALVAAPE 172 (217)
T ss_dssp CTTCEEEEECSEESSSHHHHHHHHHHHTTTCCGGGEEEECSEECHH
T ss_pred CCCCEEEEEcCcccccHHHHHHHHHHHHcCCCcCeEEEEEEEeCHH
Confidence 4789999999999999999999999999998 9999999887653
No 57
>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} SCOP: c.61.1.1 PDB: 1vst_A* 1xtu_A* 1xtv_A* 3g6w_A*
Probab=98.12 E-value=2.5e-06 Score=61.70 Aligned_cols=42 Identities=7% Similarity=0.250 Sum_probs=37.7
Q ss_pred CCCC--eEEEEeeeechhHHHHHHHHHHHhCCC-CEEEEEEEEEcC
Q 034410 1 MHTF--LCSQVEDIVDTGTTLSSLIANLVSKGA-SSVSVCTLLDKP 43 (95)
Q Consensus 1 ~~~k--~vliVDDIidTG~Tl~~~~~~l~~~g~-~~i~~~~l~~k~ 43 (95)
+.++ +|+|+||++.||+|+.++++.|++ |+ ++|.+++++.-+
T Consensus 129 i~~~~~~VilvDp~laTG~T~~~ai~~L~~-G~p~~I~~~~~vaa~ 173 (216)
T 1xtt_A 129 IRAKVDNVIIADPMIATASTMLKVLEEVVK-ANPKRIYIVSIISSE 173 (216)
T ss_dssp CCTTTCEEEEECSEESSSHHHHHHHHHHGG-GCCSEEEEECSEEEH
T ss_pred ccCCcceEEEEcCCccchHHHHHHHHHHHh-CCCCeEEEEEEecCH
Confidence 4577 999999999999999999999999 98 999999976644
No 58
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=77.08 E-value=4.1 Score=26.24 Aligned_cols=32 Identities=13% Similarity=0.042 Sum_probs=20.2
Q ss_pred CCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEE
Q 034410 3 TFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVC 37 (95)
Q Consensus 3 ~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~ 37 (95)
+-|||||||=-..-. .+.+.|++.|...+..|
T Consensus 12 ~~rILiVDD~~~~r~---~l~~~L~~~G~~~v~~a 43 (134)
T 3to5_A 12 NMKILIVDDFSTMRR---IVKNLLRDLGFNNTQEA 43 (134)
T ss_dssp TCCEEEECSCHHHHH---HHHHHHHHTTCCCEEEE
T ss_pred CCEEEEEeCCHHHHH---HHHHHHHHcCCcEEEEE
Confidence 448999999654443 34455667787655443
No 59
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=68.77 E-value=11 Score=25.03 Aligned_cols=33 Identities=21% Similarity=0.179 Sum_probs=20.9
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEE
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVC 37 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~ 37 (95)
.+.+||||||=-.... .+.+.|.+.|...+..+
T Consensus 60 ~~~~ILiVdDd~~~~~---~l~~~L~~~g~~~v~~a 92 (206)
T 3mm4_A 60 RGKRVLVVDDNFISRK---VATGKLKKMGVSEVEQC 92 (206)
T ss_dssp TTCEEEEECSCHHHHH---HHHHHHHHTTCSEEEEE
T ss_pred CCCEEEEEeCCHHHHH---HHHHHHHHcCCCeeeee
Confidence 5679999999654444 44555666676544443
No 60
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=66.43 E-value=9.8 Score=22.66 Aligned_cols=31 Identities=16% Similarity=0.064 Sum_probs=18.5
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEE
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVS 35 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~ 35 (95)
+..+||||||=-.. ...+.+.|++.|...+.
T Consensus 4 ~~~~iLivdd~~~~---~~~l~~~L~~~g~~~v~ 34 (129)
T 3h1g_A 4 GSMKLLVVDDSSTM---RRIIKNTLSRLGYEDVL 34 (129)
T ss_dssp --CCEEEECSCHHH---HHHHHHHHHHTTCCCEE
T ss_pred CCcEEEEEeCCHHH---HHHHHHHHHHcCCcEEE
Confidence 45789999985544 44445556667765433
No 61
>1o63_A ATP phosphoribosyltransferase; structural genomics; 2.00A {Thermotoga maritima} SCOP: c.94.1.1 PDB: 1o64_A 1usy_E* 1usy_H*
Probab=60.60 E-value=3.2 Score=29.82 Aligned_cols=13 Identities=46% Similarity=0.726 Sum_probs=10.7
Q ss_pred EeeeechhHHHHH
Q 034410 9 VEDIVDTGTTLSS 21 (95)
Q Consensus 9 VDDIidTG~Tl~~ 21 (95)
|=||++||+||++
T Consensus 146 IvDivsTG~TLra 158 (219)
T 1o63_A 146 IVDITETGRTLKE 158 (219)
T ss_dssp EEEEESSSHHHHH
T ss_pred eEEeeccHHHHHH
Confidence 3489999999875
No 62
>1ve4_A ATP phosphoribosyltransferase; riken structural genomics/proteomics initiative structural genomics; 1.20A {Thermus thermophilus} SCOP: c.94.1.1
Probab=59.93 E-value=3.4 Score=29.37 Aligned_cols=13 Identities=54% Similarity=0.787 Sum_probs=10.5
Q ss_pred EeeeechhHHHHH
Q 034410 9 VEDIVDTGTTLSS 21 (95)
Q Consensus 9 VDDIidTG~Tl~~ 21 (95)
|=||++||+||++
T Consensus 151 IvDivsTG~TLra 163 (206)
T 1ve4_A 151 VVDVVQTGATLRA 163 (206)
T ss_dssp EEEEESSSHHHHH
T ss_pred EEEeccCHHHHHH
Confidence 3489999999864
No 63
>1z7m_E ATP phosphoribosyltransferase; ATP-PRT, histidine biosynthesis, hiszg, alloste evolution; 2.90A {Lactococcus lactis} SCOP: c.94.1.1 PDB: 1z7n_E*
Probab=58.12 E-value=3 Score=29.62 Aligned_cols=20 Identities=45% Similarity=0.735 Sum_probs=14.0
Q ss_pred EeeeechhHHHHHHHHHHHhCCCCEEE
Q 034410 9 VEDIVDTGTTLSSLIANLVSKGASSVS 35 (95)
Q Consensus 9 VDDIidTG~Tl~~~~~~l~~~g~~~i~ 35 (95)
|=||++||+||+ ++|-+.+.
T Consensus 153 IvDivsTG~TLr-------~NgL~~ie 172 (208)
T 1z7m_E 153 IVDIVETGNTLS-------ANGLEVIE 172 (208)
T ss_dssp EEEEESSSHHHH-------TTTCEEEE
T ss_pred EEEEeCChHHHH-------HCCCEEeE
Confidence 348999999986 45555543
No 64
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=57.65 E-value=22 Score=26.23 Aligned_cols=32 Identities=9% Similarity=0.121 Sum_probs=26.7
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEE
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVC 37 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~ 37 (95)
+++++||+ -+|++-+.++..|.+.|+++|.++
T Consensus 147 ~gk~~lVl----GAGGaaraia~~L~~~G~~~v~v~ 178 (312)
T 3t4e_A 147 RGKTMVLL----GAGGAATAIGAQAAIEGIKEIKLF 178 (312)
T ss_dssp TTCEEEEE----CCSHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCEEEEE----CcCHHHHHHHHHHHHcCCCEEEEE
Confidence 57888876 579999999999999999876544
No 65
>2ekd_A Hypothetical protein PH0250; NPPSFA, national project on protein structural and functiona analyses; 2.30A {Pyrococcus horikoshii}
Probab=52.41 E-value=7.1 Score=27.65 Aligned_cols=20 Identities=25% Similarity=0.185 Sum_probs=15.2
Q ss_pred EEEEeeeechhHHHHHHHHH
Q 034410 6 CSQVEDIVDTGTTLSSLIAN 25 (95)
Q Consensus 6 vliVDDIidTG~Tl~~~~~~ 25 (95)
-++|||++||+.+.+.-++.
T Consensus 42 pilI~DilDtl~i~~~~Lkl 61 (207)
T 2ekd_A 42 PIVVDDILDTYYEFYTRLKV 61 (207)
T ss_dssp CBEEEEETTHHHHHHHHHHH
T ss_pred cEEEEeccccHHHHHHHHHh
Confidence 47899999999776654444
No 66
>2vd3_A ATP phosphoribosyltransferase; metal-binding, glycosyltransferase, HISG, histidine, magnesi transferase; HET: HIS; 2.45A {Methanobacterium thermoautotrophicum}
Probab=52.34 E-value=5.5 Score=29.70 Aligned_cols=13 Identities=46% Similarity=0.680 Sum_probs=10.5
Q ss_pred EeeeechhHHHHH
Q 034410 9 VEDIVDTGTTLSS 21 (95)
Q Consensus 9 VDDIidTG~Tl~~ 21 (95)
|=||++||+||++
T Consensus 158 IvDivsTG~TLra 170 (289)
T 2vd3_A 158 ITDLSSTGTTLRM 170 (289)
T ss_dssp EEEEESSTHHHHH
T ss_pred EEEEeCChHHHHH
Confidence 3489999999874
No 67
>3c19_A Uncharacterized protein MK0293; protein structure initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 2.50A {Methanopyrus kandleri AV19}
Probab=52.30 E-value=14 Score=25.89 Aligned_cols=36 Identities=19% Similarity=0.324 Sum_probs=30.8
Q ss_pred EeeeechhHHHHHHHHHHHh-CCCCEEEEEEEEEcCCCc
Q 034410 9 VEDIVDTGTTLSSLIANLVS-KGASSVSVCTLLDKPARR 46 (95)
Q Consensus 9 VDDIidTG~Tl~~~~~~l~~-~g~~~i~~~~l~~k~~~~ 46 (95)
|||+ ||--+..+.+.|.+ +||..+.+.-++-|.++.
T Consensus 19 IDD~--tpE~lg~~~e~L~~~aGAlDV~~tPi~MKKnRP 55 (186)
T 3c19_A 19 LDDR--DGEVLGDAIQKLIEREEVLACHAVPCVTKKNRP 55 (186)
T ss_dssp EETT--STTHHHHHHHHHTTSTTEEEEEEEEEEETTTEE
T ss_pred CCCC--CHHHHHHHHHHHHhhCCCeEEEeeeceEeCCCc
Confidence 5665 89999999999999 999999998888887654
No 68
>1h3d_A ATP-phosphoribosyltransferase; hisitidine biosynthesis, glycosyltransferase; HET: AMP TLA; 2.7A {Escherichia coli} SCOP: c.94.1.1 d.58.5.3 PDB: 1q1k_A*
Probab=51.44 E-value=5.5 Score=29.76 Aligned_cols=13 Identities=46% Similarity=0.744 Sum_probs=10.6
Q ss_pred EeeeechhHHHHH
Q 034410 9 VEDIVDTGTTLSS 21 (95)
Q Consensus 9 VDDIidTG~Tl~~ 21 (95)
|=||++||+||++
T Consensus 167 IvDivsTG~TLra 179 (299)
T 1h3d_A 167 ICDLVSTGATLEA 179 (299)
T ss_dssp EEEEESSCHHHHH
T ss_pred EEecccCHHHHHH
Confidence 3489999999875
No 69
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=50.74 E-value=28 Score=20.79 Aligned_cols=32 Identities=19% Similarity=-0.012 Sum_probs=24.9
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEE
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSV 36 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~ 36 (95)
+++.|+++.+ +|..-..+...|++.|.+.++.
T Consensus 51 ~~~~ivvyc~---~g~rs~~a~~~L~~~G~~~v~~ 82 (106)
T 3hix_A 51 KSRDIYVYGA---GDEQTSQAVNLLRSAGFEHVSE 82 (106)
T ss_dssp TTSCEEEECS---SHHHHHHHHHHHHHTTCSCEEE
T ss_pred CCCeEEEEEC---CCChHHHHHHHHHHcCCcCEEE
Confidence 3567888764 7888888899999999876553
No 70
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=49.93 E-value=33 Score=19.38 Aligned_cols=32 Identities=13% Similarity=0.006 Sum_probs=24.5
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEE
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSV 36 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~ 36 (95)
+++.|+++. .+|..-..+...|++.|.+.+..
T Consensus 40 ~~~~ivv~C---~~g~rs~~aa~~L~~~G~~~v~~ 71 (85)
T 2jtq_A 40 KNDTVKVYC---NAGRQSGQAKEILSEMGYTHVEN 71 (85)
T ss_dssp TTSEEEEEE---SSSHHHHHHHHHHHHTTCSSEEE
T ss_pred CCCcEEEEc---CCCchHHHHHHHHHHcCCCCEEe
Confidence 356788876 47888888889999999877654
No 71
>1nh8_A ATP phosphoribosyltransferase; prtase, de novo His biosynthesis, PRPP, structural genomics, PSI, protei structure initiative; HET: AMP HIS; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.94.1.1 d.58.5.3 PDB: 1nh7_A*
Probab=49.90 E-value=6.1 Score=29.71 Aligned_cols=13 Identities=46% Similarity=0.800 Sum_probs=10.6
Q ss_pred EeeeechhHHHHH
Q 034410 9 VEDIVDTGTTLSS 21 (95)
Q Consensus 9 VDDIidTG~Tl~~ 21 (95)
|=||++||+||++
T Consensus 172 IvDiVsTG~TLra 184 (304)
T 1nh8_A 172 IADVVGSGRTLSQ 184 (304)
T ss_dssp EEEEESSSHHHHH
T ss_pred EEEEeCChHHHHH
Confidence 3489999999874
No 72
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=47.40 E-value=36 Score=24.46 Aligned_cols=32 Identities=19% Similarity=0.283 Sum_probs=27.0
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEE
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVC 37 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~ 37 (95)
+++++|| +-+|++-++++-.|.+.|+++|.++
T Consensus 124 ~~~~~li----lGaGGaarai~~aL~~~g~~~i~i~ 155 (269)
T 3tum_A 124 AGKRALV----IGCGGVGSAIAYALAEAGIASITLC 155 (269)
T ss_dssp TTCEEEE----ECCSHHHHHHHHHHHHTTCSEEEEE
T ss_pred ccCeEEE----EecHHHHHHHHHHHHHhCCCeEEEe
Confidence 5688885 5799999999999999999886655
No 73
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=46.70 E-value=32 Score=21.85 Aligned_cols=32 Identities=19% Similarity=-0.012 Sum_probs=25.3
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEE
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSV 36 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~ 36 (95)
+++.|+++.+ +|..-..+...|++.|.+.++.
T Consensus 55 ~~~~ivvyC~---~g~rs~~aa~~L~~~G~~~v~~ 86 (141)
T 3ilm_A 55 KSRDIYVYGA---GDEQTSQAVNLLRSAGFEHVSE 86 (141)
T ss_dssp TTSEEEEECS---SHHHHHHHHHHHHHTTCCSEEE
T ss_pred CCCeEEEEEC---CChHHHHHHHHHHHcCCCCEEE
Confidence 3577888765 7888888999999999877654
No 74
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=46.18 E-value=13 Score=21.88 Aligned_cols=28 Identities=25% Similarity=0.093 Sum_probs=17.8
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
|...+||||||=-..... +.+.|.+.|.
T Consensus 1 M~~~~ilivdd~~~~~~~---l~~~L~~~g~ 28 (127)
T 3i42_A 1 MSLQQALIVEDYQAAAET---FKELLEMLGF 28 (127)
T ss_dssp -CCEEEEEECSCHHHHHH---HHHHHHHTTE
T ss_pred CCcceEEEEcCCHHHHHH---HHHHHHHcCC
Confidence 667899999985544444 4455556664
No 75
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=45.59 E-value=43 Score=19.38 Aligned_cols=30 Identities=17% Similarity=0.142 Sum_probs=18.0
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEE
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSV 34 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i 34 (95)
+..+||||||=-.....+. +.|.+.|...+
T Consensus 3 ~~~~ilivdd~~~~~~~l~---~~l~~~~~~~v 32 (128)
T 1jbe_A 3 KELKFLVVDDFSTMRRIVR---NLLKELGFNNV 32 (128)
T ss_dssp TTCCEEEECSCHHHHHHHH---HHHHHTTCCCE
T ss_pred CccEEEEECCCHHHHHHHH---HHHHHcCCcEE
Confidence 3468999999655544444 44555565333
No 76
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=45.36 E-value=43 Score=23.96 Aligned_cols=32 Identities=9% Similarity=0.204 Sum_probs=26.1
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEE
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVC 37 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~ 37 (95)
++++++|+ -+|+.-+.++..|.+.|+++|.++
T Consensus 119 ~~k~~lvl----GaGg~~~aia~~L~~~G~~~v~i~ 150 (272)
T 3pwz_A 119 RNRRVLLL----GAGGAVRGALLPFLQAGPSELVIA 150 (272)
T ss_dssp TTSEEEEE----CCSHHHHHHHHHHHHTCCSEEEEE
T ss_pred cCCEEEEE----CccHHHHHHHHHHHHcCCCEEEEE
Confidence 57888865 579999999999999998876554
No 77
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=45.27 E-value=47 Score=23.90 Aligned_cols=32 Identities=13% Similarity=0.223 Sum_probs=26.1
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEE
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVC 37 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~ 37 (95)
++++++|+ -+|+.-+.++..|.+.|+++|.++
T Consensus 125 ~~k~vlvl----GaGg~g~aia~~L~~~G~~~v~v~ 156 (281)
T 3o8q_A 125 KGATILLI----GAGGAARGVLKPLLDQQPASITVT 156 (281)
T ss_dssp TTCEEEEE----CCSHHHHHHHHHHHTTCCSEEEEE
T ss_pred cCCEEEEE----CchHHHHHHHHHHHhcCCCeEEEE
Confidence 57888876 579999999999999998876554
No 78
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=44.87 E-value=17 Score=21.38 Aligned_cols=28 Identities=25% Similarity=-0.018 Sum_probs=18.4
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
+.+++||||||=-.... .+.+.|.+.|.
T Consensus 5 ~~~~~ilivdd~~~~~~---~l~~~L~~~g~ 32 (130)
T 3eod_A 5 LVGKQILIVEDEQVFRS---LLDSWFSSLGA 32 (130)
T ss_dssp TTTCEEEEECSCHHHHH---HHHHHHHHTTC
T ss_pred CCCCeEEEEeCCHHHHH---HHHHHHHhCCc
Confidence 35789999998554444 44555666665
No 79
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=44.57 E-value=32 Score=24.97 Aligned_cols=32 Identities=16% Similarity=0.293 Sum_probs=26.6
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEE
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVC 37 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~ 37 (95)
+++++||+ -+|++-+.++..|.+.|+++|.++
T Consensus 121 ~~k~vlvl----GaGGaaraia~~L~~~G~~~v~v~ 152 (282)
T 3fbt_A 121 KNNICVVL----GSGGAARAVLQYLKDNFAKDIYVV 152 (282)
T ss_dssp TTSEEEEE----CSSTTHHHHHHHHHHTTCSEEEEE
T ss_pred cCCEEEEE----CCcHHHHHHHHHHHHcCCCEEEEE
Confidence 57888865 689999999999999999887655
No 80
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=43.85 E-value=47 Score=23.85 Aligned_cols=33 Identities=21% Similarity=0.222 Sum_probs=26.6
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEE
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVC 37 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~ 37 (95)
++++++||+ -+|+.-+.++..|.+.|+++|.++
T Consensus 125 l~~k~vlVl----GaGG~g~aia~~L~~~G~~~v~i~ 157 (283)
T 3jyo_A 125 AKLDSVVQV----GAGGVGNAVAYALVTHGVQKLQVA 157 (283)
T ss_dssp CCCSEEEEE----CCSHHHHHHHHHHHHTTCSEEEEE
T ss_pred cCCCEEEEE----CCcHHHHHHHHHHHHCCCCEEEEE
Confidence 357888875 579999999999999999876554
No 81
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=43.82 E-value=42 Score=20.04 Aligned_cols=31 Identities=10% Similarity=0.069 Sum_probs=24.1
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEE
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSV 36 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~ 36 (95)
+++.|++.. .+|..-..+...|++.|. .++.
T Consensus 54 ~~~~ivvyC---~~G~rs~~aa~~L~~~G~-~v~~ 84 (108)
T 3gk5_A 54 RDKKYAVIC---AHGNRSAAAVEFLSQLGL-NIVD 84 (108)
T ss_dssp TTSCEEEEC---SSSHHHHHHHHHHHTTTC-CEEE
T ss_pred CCCeEEEEc---CCCcHHHHHHHHHHHcCC-CEEE
Confidence 357788887 688888888999999998 5443
No 82
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=43.61 E-value=17 Score=21.86 Aligned_cols=28 Identities=21% Similarity=0.077 Sum_probs=18.0
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
|+..+||||||=-.....+ ...|.+.|.
T Consensus 2 m~~~~iLivdd~~~~~~~l---~~~L~~~g~ 29 (136)
T 3t6k_A 2 MKPHTLLIVDDDDTVAEML---ELVLRGAGY 29 (136)
T ss_dssp -CCCEEEEECSCHHHHHHH---HHHHHHTTC
T ss_pred CCCCEEEEEeCCHHHHHHH---HHHHHHCCC
Confidence 5678999999965544444 445555664
No 83
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=43.09 E-value=21 Score=20.89 Aligned_cols=28 Identities=21% Similarity=0.253 Sum_probs=18.9
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
|.+.+||||||=-.....+.. .|.+.|.
T Consensus 1 m~~~~ilivdd~~~~~~~l~~---~l~~~~~ 28 (126)
T 1dbw_A 1 MQDYTVHIVDDEEPVRKSLAF---MLTMNGF 28 (126)
T ss_dssp CCCCEEEEEESSHHHHHHHHH---HHHHTTC
T ss_pred CCCCEEEEEcCCHHHHHHHHH---HHHhCCc
Confidence 678899999997665555544 4445554
No 84
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=42.20 E-value=50 Score=19.24 Aligned_cols=30 Identities=10% Similarity=0.115 Sum_probs=23.6
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEE
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVS 35 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~ 35 (95)
+++.|++.. .+|..-..+...|++.|. .++
T Consensus 55 ~~~~ivvyC---~~g~rs~~a~~~L~~~G~-~v~ 84 (100)
T 3foj_A 55 DNETYYIIC---KAGGRSAQVVQYLEQNGV-NAV 84 (100)
T ss_dssp TTSEEEEEC---SSSHHHHHHHHHHHTTTC-EEE
T ss_pred CCCcEEEEc---CCCchHHHHHHHHHHCCC-CEE
Confidence 357788876 788888889999999998 544
No 85
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=41.41 E-value=55 Score=24.06 Aligned_cols=33 Identities=9% Similarity=0.146 Sum_probs=26.7
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEE
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVC 37 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~ 37 (95)
++||++||+ -+|+.-++++..|.+.|+++|.++
T Consensus 152 l~gk~~lVl----GaGG~g~aia~~L~~~Ga~~V~i~ 184 (315)
T 3tnl_A 152 IIGKKMTIC----GAGGAATAICIQAALDGVKEISIF 184 (315)
T ss_dssp CTTSEEEEE----CCSHHHHHHHHHHHHTTCSEEEEE
T ss_pred ccCCEEEEE----CCChHHHHHHHHHHHCCCCEEEEE
Confidence 367888876 479999999999999999876554
No 86
>3eqz_A Response regulator; structural genomics, unknown function, PSI-2, protein struct initiative; 2.15A {Colwellia psychrerythraea} SCOP: c.23.1.0
Probab=40.32 E-value=14 Score=21.72 Aligned_cols=26 Identities=19% Similarity=-0.082 Sum_probs=15.5
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhC
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSK 29 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~ 29 (95)
|...+||||||=-..... +.+.|++.
T Consensus 1 M~~~~ilivdd~~~~~~~---l~~~L~~~ 26 (135)
T 3eqz_A 1 MSLNRVFIVDDDTLTCNL---LKTIVEPI 26 (135)
T ss_dssp --CCEEEEECSCHHHHHH---HHHHHTTT
T ss_pred CCcceEEEEeCCHHHHHH---HHHHHHhh
Confidence 667899999986554444 44445444
No 87
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=39.71 E-value=19 Score=21.69 Aligned_cols=28 Identities=18% Similarity=0.024 Sum_probs=16.7
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
|.+.+||||||=-... ..+.+.|.+.|.
T Consensus 3 ~~~~~ilivdd~~~~~---~~l~~~L~~~g~ 30 (140)
T 3h5i_A 3 LKDKKILIVEDSKFQA---KTIANILNKYGY 30 (140)
T ss_dssp ---CEEEEECSCHHHH---HHHHHHHHHTTC
T ss_pred CCCcEEEEEeCCHHHH---HHHHHHHHHcCC
Confidence 4568999999855444 444555666665
No 88
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=38.86 E-value=21 Score=20.87 Aligned_cols=28 Identities=11% Similarity=0.051 Sum_probs=18.2
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
|.+.+||||||=-.....+. +.|.+.|.
T Consensus 3 m~~~~ilivdd~~~~~~~l~---~~L~~~g~ 30 (132)
T 2rdm_A 3 LEAVTILLADDEAILLLDFE---STLTDAGF 30 (132)
T ss_dssp CSSCEEEEECSSHHHHHHHH---HHHHHTTC
T ss_pred CCCceEEEEcCcHHHHHHHH---HHHHHcCC
Confidence 45679999998665555444 44445555
No 89
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=37.94 E-value=25 Score=20.81 Aligned_cols=27 Identities=11% Similarity=0.017 Sum_probs=17.6
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
++.+||||||=-.....+.. .|...|.
T Consensus 6 ~~~~ILivdd~~~~~~~l~~---~L~~~g~ 32 (136)
T 1dcf_A 6 TGLKVLVMDENGVSRMVTKG---LLVHLGC 32 (136)
T ss_dssp TTCEEEEECSCHHHHHHHHH---HHHHTTC
T ss_pred CCCeEEEEeCCHHHHHHHHH---HHHHcCC
Confidence 46799999997655555444 4444554
No 90
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=36.89 E-value=34 Score=20.31 Aligned_cols=31 Identities=13% Similarity=0.049 Sum_probs=23.2
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEE
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVS 35 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~ 35 (95)
+++.|+++.+ +|..-..+...|++.|.+.++
T Consensus 57 ~~~~ivvyc~---~g~rs~~a~~~L~~~G~~~v~ 87 (108)
T 1gmx_A 57 FDTPVMVMCY---HGNSSKGAAQYLLQQGYDVVY 87 (108)
T ss_dssp TTSCEEEECS---SSSHHHHHHHHHHHHTCSSEE
T ss_pred CCCCEEEEcC---CCchHHHHHHHHHHcCCceEE
Confidence 3577888764 777777888888888887654
No 91
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=36.04 E-value=19 Score=21.29 Aligned_cols=28 Identities=18% Similarity=-0.092 Sum_probs=17.5
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
|...+||||||=-..... +.+.|.+.|.
T Consensus 1 m~~~~ilivdd~~~~~~~---l~~~L~~~g~ 28 (140)
T 2qr3_A 1 MSLGTIIIVDDNKGVLTA---VQLLLKNHFS 28 (140)
T ss_dssp -CCCEEEEECSCHHHHHH---HHHHHTTTSS
T ss_pred CCCceEEEEeCCHHHHHH---HHHHHHhCCc
Confidence 677899999986544444 4444555554
No 92
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=35.92 E-value=63 Score=18.85 Aligned_cols=30 Identities=13% Similarity=0.148 Sum_probs=22.9
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEE
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVS 35 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~ 35 (95)
+++.|++.. .+|..-..+...|++.|. .+.
T Consensus 55 ~~~~iv~yC---~~g~rs~~a~~~L~~~G~-~v~ 84 (103)
T 3eme_A 55 KNEIYYIVC---AGGVRSAKVVEYLEANGI-DAV 84 (103)
T ss_dssp TTSEEEEEC---SSSSHHHHHHHHHHTTTC-EEE
T ss_pred CCCeEEEEC---CCChHHHHHHHHHHHCCC-CeE
Confidence 356788876 588777788899999998 544
No 93
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=35.88 E-value=26 Score=20.26 Aligned_cols=28 Identities=32% Similarity=0.199 Sum_probs=17.3
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
|+..+||||||=-.....+ .+.|.+.|.
T Consensus 1 m~~~~ilivdd~~~~~~~l---~~~l~~~~~ 28 (123)
T 1xhf_A 1 MQTPHILIVEDELVTRNTL---KSIFEAEGY 28 (123)
T ss_dssp -CCCEEEEECSCHHHHHHH---HHHHHTTTC
T ss_pred CCCceEEEEeCCHHHHHHH---HHHHhhCCc
Confidence 5677999999865444444 444555554
No 94
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=35.40 E-value=18 Score=21.57 Aligned_cols=26 Identities=15% Similarity=-0.093 Sum_probs=14.8
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhC
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSK 29 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~ 29 (95)
|..++||||||=-..... +.+.|.+.
T Consensus 1 M~~~~iLivdd~~~~~~~---l~~~l~~~ 26 (140)
T 3n53_A 1 MSLKKILIIDQQDFSRIE---LKNFLDSE 26 (140)
T ss_dssp --CCEEEEECSCHHHHHH---HHHHHTTT
T ss_pred CCCCEEEEEeCCHHHHHH---HHHHHHhc
Confidence 567899999985544433 44444433
No 95
>2vd2_A ATP phosphoribosyltransferase; HISG, glycosyltransferase, histidine biosynthes amino-acid biosynthesis; 2.85A {Bacillus subtilis}
Probab=34.96 E-value=3.3 Score=29.58 Aligned_cols=20 Identities=40% Similarity=0.589 Sum_probs=14.1
Q ss_pred EeeeechhHHHHHHHHHHHhCCCCEEE
Q 034410 9 VEDIVDTGTTLSSLIANLVSKGASSVS 35 (95)
Q Consensus 9 VDDIidTG~Tl~~~~~~l~~~g~~~i~ 35 (95)
|=||++||+||+ ++|-+.+.
T Consensus 155 IvDivsTG~TLr-------aNgL~~ie 174 (214)
T 2vd2_A 155 IVDIVSTGQTLK-------ENGLVETE 174 (214)
T ss_dssp EEEEECCSSSSC-------TTSCEEEE
T ss_pred EEEEeCCHHHHH-------HCCCEEeE
Confidence 348999999975 46665553
No 96
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=34.52 E-value=26 Score=22.41 Aligned_cols=28 Identities=21% Similarity=0.097 Sum_probs=17.4
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
|.+.+||||||=-.....+ .+.|.+.|.
T Consensus 5 m~~~~iLivdd~~~~~~~l---~~~L~~~g~ 32 (184)
T 3rqi_A 5 MSDKNFLVIDDNEVFAGTL---ARGLERRGY 32 (184)
T ss_dssp --CCEEEEECSCHHHHHHH---HHHHHHTTC
T ss_pred CCCCeEEEEcCCHHHHHHH---HHHHHHCCC
Confidence 5678999999966554444 445555664
No 97
>3kwm_A Ribose-5-phosphate isomerase A; structural genomics, IDP02119, center for structu genomics of infectious diseases, csgid; 2.32A {Francisella tularensis subsp}
Probab=34.16 E-value=32 Score=24.49 Aligned_cols=23 Identities=35% Similarity=0.492 Sum_probs=18.1
Q ss_pred echhHHHHHHHHHHHhCCCCEEEE
Q 034410 13 VDTGTTLSSLIANLVSKGASSVSV 36 (95)
Q Consensus 13 idTG~Tl~~~~~~l~~~g~~~i~~ 36 (95)
++||+|..++++.|.+.. +.+.+
T Consensus 32 lgsGST~~~~i~~L~~~~-~~itv 54 (224)
T 3kwm_A 32 VGTGSTVGFLIEELVNYR-DKIKT 54 (224)
T ss_dssp ECCSHHHHHHHHHGGGCT-TTEEE
T ss_pred ECCcHHHHHHHHHHHhhc-CceEE
Confidence 579999999999998753 34555
No 98
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=32.91 E-value=32 Score=21.61 Aligned_cols=26 Identities=15% Similarity=0.115 Sum_probs=18.9
Q ss_pred CeEEEEeeeechhHHHHHHHHHHHhCCCC
Q 034410 4 FLCSQVEDIVDTGTTLSSLIANLVSKGAS 32 (95)
Q Consensus 4 k~vliVDDIidTG~Tl~~~~~~l~~~g~~ 32 (95)
-|||||||=-.....++...+ +.|..
T Consensus 9 ~rILiVdD~~~~~~~l~~~L~---~~G~~ 34 (123)
T 2lpm_A 9 LRVLVVEDESMIAMLIEDTLC---ELGHE 34 (123)
T ss_dssp CCEEEESSSTTTSHHHHHHHH---HHCCC
T ss_pred CEEEEEeCCHHHHHHHHHHHH---HCCCE
Confidence 479999998888777766554 44554
No 99
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=32.72 E-value=31 Score=20.11 Aligned_cols=27 Identities=15% Similarity=-0.086 Sum_probs=17.7
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
++++||||||=-... ..+.+.|.+.|.
T Consensus 1 ~~~~ilivdd~~~~~---~~l~~~L~~~~~ 27 (140)
T 1k68_A 1 AHKKIFLVEDNKADI---RLIQEALANSTV 27 (140)
T ss_dssp CCCEEEEECCCHHHH---HHHHHHHHTCSS
T ss_pred CCCeEEEEeCCHHHH---HHHHHHHHhcCC
Confidence 468999999855444 444555666665
No 100
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A*
Probab=32.50 E-value=95 Score=19.61 Aligned_cols=36 Identities=11% Similarity=0.186 Sum_probs=21.6
Q ss_pred CCeEEEEeeeec-hhHHHHHHHHHHHhCCCCEEEEEEE
Q 034410 3 TFLCSQVEDIVD-TGTTLSSLIANLVSKGASSVSVCTL 39 (95)
Q Consensus 3 ~k~vliVDDIid-TG~Tl~~~~~~l~~~g~~~i~~~~l 39 (95)
.+.+|++||+=. +..++..+.+.+.+... .+.++..
T Consensus 126 ~~~vlviDe~~~l~~~~~~~l~~~l~~~~~-~~~~i~~ 162 (250)
T 1njg_A 126 RFKVYLIDEVHMLSRHSFNALLKTLEEPPE-HVKFLLA 162 (250)
T ss_dssp SSEEEEEETGGGSCHHHHHHHHHHHHSCCT-TEEEEEE
T ss_pred CceEEEEECcccccHHHHHHHHHHHhcCCC-ceEEEEE
Confidence 357999999843 24566667777765433 3344333
No 101
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=32.30 E-value=29 Score=20.55 Aligned_cols=28 Identities=14% Similarity=0.013 Sum_probs=17.8
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
|...+||||||=-.....++... ++.|.
T Consensus 1 m~~~~Ilivdd~~~~~~~l~~~L---~~~g~ 28 (132)
T 3crn_A 1 MSLKRILIVDDDTAILDSTKQIL---EFEGY 28 (132)
T ss_dssp --CCEEEEECSCHHHHHHHHHHH---HHTTC
T ss_pred CCccEEEEEeCCHHHHHHHHHHH---HHCCc
Confidence 55679999999776666555544 44554
No 102
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=32.04 E-value=75 Score=19.33 Aligned_cols=25 Identities=32% Similarity=0.303 Sum_probs=16.4
Q ss_pred CeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 4 FLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 4 k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
.+||||||=-. ....+.+.|++.|.
T Consensus 37 ~~Ilivdd~~~---~~~~l~~~L~~~g~ 61 (157)
T 3hzh_A 37 FNVLIVDDSVF---TVKQLTQIFTSEGF 61 (157)
T ss_dssp CEEEEECSCHH---HHHHHHHHHHHTTC
T ss_pred eEEEEEeCCHH---HHHHHHHHHHhCCC
Confidence 58999998544 44445555666665
No 103
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=31.51 E-value=83 Score=23.82 Aligned_cols=32 Identities=19% Similarity=0.185 Sum_probs=25.7
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEE
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVC 37 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~ 37 (95)
.||+|+|| -.|.|-.+++..+.+.|+++|.++
T Consensus 263 ~gk~VvVI----GgG~~a~d~A~~~~r~Ga~~Vtiv 294 (456)
T 2vdc_G 263 AGKHVVVL----GGGDTAMDCVRTAIRQGATSVKCL 294 (456)
T ss_dssp CCSEEEEE----CSSHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCEEEEE----CCChhHHHHHHHHHHcCCCEEEEE
Confidence 36888876 789999999999988898766554
No 104
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=31.51 E-value=66 Score=19.69 Aligned_cols=32 Identities=9% Similarity=-0.101 Sum_probs=23.6
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEE
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSV 36 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~ 36 (95)
+++.|++.+ .+|..-..+...|++.|.+.++.
T Consensus 85 ~~~~ivvyC---~~G~rs~~a~~~L~~~G~~~v~~ 116 (139)
T 2hhg_A 85 EDKKFVFYC---AGGLRSALAAKTAQDMGLKPVAH 116 (139)
T ss_dssp SSSEEEEEC---SSSHHHHHHHHHHHHHTCCSEEE
T ss_pred CCCeEEEEC---CCChHHHHHHHHHHHcCCCCeEE
Confidence 356788876 46877777888899889876544
No 105
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=31.39 E-value=31 Score=19.97 Aligned_cols=28 Identities=18% Similarity=0.019 Sum_probs=16.2
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
|...+||||||=-.....+ .+.|.+.|.
T Consensus 1 mm~~~ilivdd~~~~~~~l---~~~l~~~~~ 28 (124)
T 1srr_A 1 MMNEKILIVDDQSGIRILL---NEVFNKEGY 28 (124)
T ss_dssp --CCEEEEECSCHHHHHHH---HHHHHTTTC
T ss_pred CCCceEEEEeCCHHHHHHH---HHHHHHCCc
Confidence 4457899999865444444 444555554
No 106
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=30.74 E-value=37 Score=20.08 Aligned_cols=28 Identities=25% Similarity=0.058 Sum_probs=18.1
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
+.+.+||||||=-..... +.+.|.+.|.
T Consensus 4 ~~~~~iLivdd~~~~~~~---l~~~L~~~g~ 31 (149)
T 1k66_A 4 NATQPLLVVEDSDEDFST---FQRLLQREGV 31 (149)
T ss_dssp CTTSCEEEECCCHHHHHH---HHHHHHHTTB
T ss_pred CCCccEEEEECCHHHHHH---HHHHHHHcCC
Confidence 356899999986554444 4455556665
No 107
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=30.23 E-value=42 Score=24.14 Aligned_cols=32 Identities=9% Similarity=0.093 Sum_probs=25.7
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEE
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVC 37 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~ 37 (95)
++++++|+ -+|+.-+.++..|.+.|+++|.++
T Consensus 116 ~~k~vlvl----GaGg~g~aia~~L~~~G~~~v~v~ 147 (277)
T 3don_A 116 EDAYILIL----GAGGASKGIANELYKIVRPTLTVA 147 (277)
T ss_dssp GGCCEEEE----CCSHHHHHHHHHHHTTCCSCCEEE
T ss_pred CCCEEEEE----CCcHHHHHHHHHHHHCCCCEEEEE
Confidence 46788765 689999999999999999776554
No 108
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=29.65 E-value=37 Score=20.18 Aligned_cols=28 Identities=18% Similarity=0.092 Sum_probs=17.1
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
|...+||||||=-. ....+.+.|.+.|.
T Consensus 1 M~~~~ilivdd~~~---~~~~l~~~l~~~g~ 28 (143)
T 3jte_A 1 MSLAKILVIDDEST---ILQNIKFLLEIDGN 28 (143)
T ss_dssp --CCEEEEECSCHH---HHHHHHHHHHHTTC
T ss_pred CCCCEEEEEcCCHH---HHHHHHHHHHhCCc
Confidence 56789999998544 34445555666664
No 109
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=29.53 E-value=84 Score=18.28 Aligned_cols=32 Identities=16% Similarity=0.136 Sum_probs=18.3
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHh-CCCCEEEE
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVS-KGASSVSV 36 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~-~g~~~i~~ 36 (95)
...+||||||=-.....+. +.|.+ .|...+..
T Consensus 7 ~~~~iLivdd~~~~~~~l~---~~L~~~~~~~~v~~ 39 (143)
T 3cnb_A 7 NDFSILIIEDDKEFADMLT---QFLENLFPYAKIKI 39 (143)
T ss_dssp --CEEEEECSCHHHHHHHH---HHHHHHCTTCEEEE
T ss_pred CCceEEEEECCHHHHHHHH---HHHHhccCccEEEE
Confidence 4578999998655554444 44555 56543433
No 110
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=29.30 E-value=32 Score=20.56 Aligned_cols=29 Identities=17% Similarity=0.066 Sum_probs=18.4
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCCC
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGAS 32 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~ 32 (95)
|...+||||||=- .....+.+.|.+.|..
T Consensus 3 ~~~~~ILivdd~~---~~~~~l~~~L~~~~~~ 31 (144)
T 3kht_A 3 LRSKRVLVVEDNP---DDIALIRRVLDRKDIH 31 (144)
T ss_dssp --CEEEEEECCCH---HHHHHHHHHHHHTTCC
T ss_pred CCCCEEEEEeCCH---HHHHHHHHHHHhcCCC
Confidence 3567999999844 3444555666667764
No 111
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=29.00 E-value=82 Score=18.79 Aligned_cols=29 Identities=21% Similarity=0.046 Sum_probs=20.5
Q ss_pred CeEEEEeeeechhHHHHHHHHHHHhCCCCEEE
Q 034410 4 FLCSQVEDIVDTGTTLSSLIANLVSKGASSVS 35 (95)
Q Consensus 4 k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~ 35 (95)
+.|++..+ .+|..-..+...|++.|. .++
T Consensus 90 ~~ivvyC~--~~G~rs~~a~~~L~~~G~-~v~ 118 (134)
T 3g5j_A 90 DNIVIYCA--RGGMRSGSIVNLLSSLGV-NVY 118 (134)
T ss_dssp SEEEEECS--SSSHHHHHHHHHHHHTTC-CCE
T ss_pred CeEEEEEC--CCChHHHHHHHHHHHcCC-ceE
Confidence 66777653 477777778888888887 543
No 112
>2okg_A Central glycolytic gene regulator; alpha/beta/alpha sandwich, rossmann-like fold, structural genomics, PSI-2, protein structure initiative; HET: MSE G3H; 1.65A {Bacillus subtilis} SCOP: c.124.1.8 PDB: 3bxe_A* 3bxf_A* 3bxg_A* 3bxh_A*
Probab=28.84 E-value=31 Score=24.32 Aligned_cols=28 Identities=14% Similarity=0.188 Sum_probs=19.7
Q ss_pred echhHHHHHHHHHHHhC-CCCEEEEEEEE
Q 034410 13 VDTGTTLSSLIANLVSK-GASSVSVCTLL 40 (95)
Q Consensus 13 idTG~Tl~~~~~~l~~~-g~~~i~~~~l~ 40 (95)
+.||+|+..+++.|... ..+.+.++-|.
T Consensus 62 la~G~T~~~~~~~l~~~~~~~~v~~v~L~ 90 (255)
T 2okg_A 62 VTGGTTIEAVAEMMTPDSKNRELLFVPAR 90 (255)
T ss_dssp ECCSHHHHHHHHHCCCCTTCCEEEEEESE
T ss_pred ECCcHHHHHHHHhhccccCCCCCEEEECC
Confidence 36888888888888654 44566666554
No 113
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=28.51 E-value=40 Score=19.55 Aligned_cols=26 Identities=23% Similarity=0.063 Sum_probs=16.8
Q ss_pred CCeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 3 TFLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 3 ~k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
+++||||||=-... ..+...|.+.|.
T Consensus 2 ~~~ilivdd~~~~~---~~l~~~L~~~g~ 27 (120)
T 3f6p_A 2 DKKILVVDDEKPIA---DILEFNLRKEGY 27 (120)
T ss_dssp CCEEEEECSCHHHH---HHHHHHHHHTTC
T ss_pred CCeEEEEECCHHHH---HHHHHHHHhCCE
Confidence 47899999855444 444455666665
No 114
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=28.48 E-value=35 Score=20.62 Aligned_cols=24 Identities=17% Similarity=0.079 Sum_probs=14.3
Q ss_pred CCCCeEEEEeeeechhHHHHHHHH
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIA 24 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~ 24 (95)
|...+||||||=-.....+....+
T Consensus 1 M~~~~iLivdd~~~~~~~l~~~L~ 24 (154)
T 2qsj_A 1 MSLTVVLIVDDHHLIRAGAKNLLE 24 (154)
T ss_dssp --CEEEEEECSCHHHHHHHHHHHH
T ss_pred CCccEEEEEcCCHHHHHHHHHHHH
Confidence 566789999986555554444433
No 115
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=28.26 E-value=43 Score=19.73 Aligned_cols=27 Identities=19% Similarity=0.153 Sum_probs=17.6
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
.+.+||||||=-.....+.. .|.+.|.
T Consensus 17 ~~~~ilivdd~~~~~~~l~~---~L~~~g~ 43 (137)
T 2pln_A 17 GSMRVLLIEKNSVLGGEIEK---GLNVKGF 43 (137)
T ss_dssp TCSEEEEECSCHHHHHHHHH---HHHHTTC
T ss_pred CCCeEEEEeCCHHHHHHHHH---HHHHcCc
Confidence 46799999986655555544 4445554
No 116
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=28.09 E-value=1.1e+02 Score=18.95 Aligned_cols=37 Identities=11% Similarity=-0.079 Sum_probs=29.8
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEE
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCT 38 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~ 38 (95)
.|..|+=|++.--++.|..++.+.|+..+...+.+.+
T Consensus 78 ~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v 114 (130)
T 1i16_A 78 PGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIVI 114 (130)
T ss_dssp TTCCEEECSSCBGGGSCHHHHHHHHHTSCSSEEEEEE
T ss_pred CCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEE
Confidence 4778899999988898999999999987666555543
No 117
>3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B*
Probab=28.07 E-value=66 Score=19.14 Aligned_cols=24 Identities=8% Similarity=-0.002 Sum_probs=15.0
Q ss_pred CCeEEEEeeeechhHHHHHHHHHHHhC
Q 034410 3 TFLCSQVEDIVDTGTTLSSLIANLVSK 29 (95)
Q Consensus 3 ~k~vliVDDIidTG~Tl~~~~~~l~~~ 29 (95)
+.+|||+||=-. ....+.+.|++.
T Consensus 13 ~~~vlivdd~~~---~~~~l~~~L~~~ 36 (145)
T 3kyj_B 13 PYNVMIVDDAAM---MRLYIASFIKTL 36 (145)
T ss_dssp SEEEEEECSCHH---HHHHHHHHHTTC
T ss_pred CCeEEEEcCCHH---HHHHHHHHHHhC
Confidence 468999998543 444445555555
No 118
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=27.81 E-value=1.2e+02 Score=21.67 Aligned_cols=32 Identities=13% Similarity=0.145 Sum_probs=25.2
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEE
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVC 37 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~ 37 (95)
++++++|+ -+|..-+.++..|.+.|+++|.++
T Consensus 140 ~~~~vlVl----GaGg~g~aia~~L~~~G~~~V~v~ 171 (297)
T 2egg_A 140 DGKRILVI----GAGGGARGIYFSLLSTAAERIDMA 171 (297)
T ss_dssp TTCEEEEE----CCSHHHHHHHHHHHTTTCSEEEEE
T ss_pred CCCEEEEE----CcHHHHHHHHHHHHHCCCCEEEEE
Confidence 57788864 579988999999999998776544
No 119
>2z0l_A EA-D, BMRF1, early antigen protein D; alpha/beta protein, activator, DNA-binding, early protein, nucleus, transcription; 2.90A {Human herpesvirus 4}
Probab=27.77 E-value=1.1e+02 Score=23.12 Aligned_cols=42 Identities=19% Similarity=0.111 Sum_probs=31.2
Q ss_pred eechhHHHHHHHHHHHhCCCCEEEEEE--------EEEcCCCceeceeec
Q 034410 12 IVDTGTTLSSLIANLVSKGASSVSVCT--------LLDKPARRKIQVELV 53 (95)
Q Consensus 12 IidTG~Tl~~~~~~l~~~g~~~i~~~~--------l~~k~~~~~~~~~pD 53 (95)
++=|..|...+.++|++++.+.++++. +-...+...++++|.
T Consensus 169 V~Ls~KT~~~LqKWLRq~kt~~Vrv~lNetL~V~v~tvgd~skTvd~kp~ 218 (318)
T 2z0l_A 169 VLLMPKTASSLQKWARQQGSGGVKVTLNPDLYVTTYTSGEACLTLDYKPL 218 (318)
T ss_dssp EECCHHHHHHHHHHHHHTTTSEEEEEEETTTTEEEEEETTEEEEEECEEC
T ss_pred EEEcHHHHHHHHHHHHHcCCCceEEEecCceEEEEEEeCCceeEEEeecc
Confidence 445889999999999999998888765 333445556666665
No 120
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=27.12 E-value=44 Score=20.21 Aligned_cols=28 Identities=14% Similarity=0.107 Sum_probs=17.7
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
+.+.+||||||=-..... +.+.|.+.|.
T Consensus 5 ~~~~~iLivdd~~~~~~~---l~~~L~~~g~ 32 (154)
T 2rjn_A 5 YKNYTVMLVDDEQPILNS---LKRLIKRLGC 32 (154)
T ss_dssp CSCCEEEEECSCHHHHHH---HHHHHHTTTC
T ss_pred CCCCeEEEEcCCHHHHHH---HHHHHHHcCC
Confidence 456899999986544444 4445555564
No 121
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=27.02 E-value=47 Score=19.73 Aligned_cols=28 Identities=18% Similarity=0.094 Sum_probs=17.5
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
|...+||||||=-.....+.. .|.+.|.
T Consensus 1 m~~~~ILivdd~~~~~~~l~~---~L~~~g~ 28 (138)
T 3c3m_A 1 MSLYTILVVDDSPMIVDVFVT---MLERGGY 28 (138)
T ss_dssp -CCCEEEEECSCHHHHHHHHH---HHHHTTC
T ss_pred CCcceEEEEeCCHHHHHHHHH---HHHHcCc
Confidence 455789999986655555544 4445554
No 122
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=26.68 E-value=1e+02 Score=18.19 Aligned_cols=29 Identities=7% Similarity=-0.067 Sum_probs=22.6
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCE
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASS 33 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~ 33 (95)
+++.|++.. .+|..-..+...|++.|.+.
T Consensus 55 ~~~~ivvyC---~~G~rs~~aa~~L~~~G~~~ 83 (110)
T 2k0z_A 55 KDKKVLLHC---RAGRRALDAAKSMHELGYTP 83 (110)
T ss_dssp SSSCEEEEC---SSSHHHHHHHHHHHHTTCCC
T ss_pred CCCEEEEEe---CCCchHHHHHHHHHHCCCCE
Confidence 356788876 67887788888999998765
No 123
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus}
Probab=26.11 E-value=90 Score=19.55 Aligned_cols=29 Identities=7% Similarity=0.026 Sum_probs=18.7
Q ss_pred CCeEEEEeeeech-hHHHHHHHHHHHhCCC
Q 034410 3 TFLCSQVEDIVDT-GTTLSSLIANLVSKGA 31 (95)
Q Consensus 3 ~k~vliVDDIidT-G~Tl~~~~~~l~~~g~ 31 (95)
...+|+|||+=.- ..+...+.+.+.....
T Consensus 102 ~~~vliiDe~~~l~~~~~~~l~~~l~~~~~ 131 (226)
T 2chg_A 102 PFKIIFLDEADALTADAQAALRRTMEMYSK 131 (226)
T ss_dssp SCEEEEEETGGGSCHHHHHHHHHHHHHTTT
T ss_pred CceEEEEeChhhcCHHHHHHHHHHHHhcCC
Confidence 4689999997543 3455566666665443
No 124
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=26.06 E-value=88 Score=17.67 Aligned_cols=26 Identities=15% Similarity=0.004 Sum_probs=16.3
Q ss_pred CCeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 3 TFLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 3 ~k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
+.+||||||=-.....++ +.|...|.
T Consensus 2 ~~~ilivdd~~~~~~~l~---~~l~~~g~ 27 (120)
T 1tmy_A 2 GKRVLIVDDAAFMRMMLK---DIITKAGY 27 (120)
T ss_dssp CCEEEEECSCHHHHHHHH---HHHHHTTC
T ss_pred CceEEEEcCcHHHHHHHH---HHHhhcCc
Confidence 468999999655444444 44455565
No 125
>2c1l_A Restriction endonuclease; BFII, domain fusion, hydrolase; HET: TAR TLA SRT MES; 1.9A {Bacillus firmus}
Probab=26.02 E-value=91 Score=23.53 Aligned_cols=57 Identities=14% Similarity=0.156 Sum_probs=40.8
Q ss_pred CCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEEEEEEEcCCCceeceeecCccCeEEEEEeCC--EEEEee
Q 034410 3 TFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPD--YFVVGY 72 (95)
Q Consensus 3 ~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~~~~~~~~pD~~~~~y~g~~i~~--~~vvgy 72 (95)
|+-++|+---++.+.|-+++++.|.+.|+ +++++ . ++.-+.|. -+|+.-++ ..|||.
T Consensus 65 gkv~~IlGgstsQrlTSKQavEElL~cGv-ev~Ii---N----rkRi~HaK-----~Yg~~~n~g~~LIV~S 123 (358)
T 2c1l_A 65 GRVIAILGGSTSQRLSSRQVVEELLNRGV-EVHII---N----RKRILHAK-----LYGTSNNLGESLVVSS 123 (358)
T ss_dssp CEEEEEEECCSSSCCBBHHHHHHHHHTTC-EEEEE---E----CSSCBCCE-----EEEEEETTEEEEEEES
T ss_pred CcEEEEEcccccccccHHHHHHHHHhcCC-ceEEe---e----eeeecchh-----hhcccCCCceEEEEec
Confidence 46667777778889999999999999998 44555 2 11126677 77888775 466764
No 126
>1dc7_A NTRC, nitrogen regulation protein; receiver domain, phosphorylation, signal transduction, conformational rearrangement; NMR {Salmonella typhimurium} SCOP: c.23.1.1 PDB: 1j56_A 1krw_A 1krx_A 1ntr_A 1dc8_A*
Probab=25.99 E-value=32 Score=19.61 Aligned_cols=28 Identities=21% Similarity=0.153 Sum_probs=18.5
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
|...+|||+||=-.....+.. .|.+.|.
T Consensus 1 m~~~~ilivdd~~~~~~~l~~---~l~~~~~ 28 (124)
T 1dc7_A 1 MQRGIVWVVDDDSSIRWVLER---ALAGAGL 28 (124)
T ss_dssp CCCCCCEEECSSSSHHHHHHH---HHTTTTC
T ss_pred CCccEEEEEeCCHHHHHHHHH---HHHhCCc
Confidence 677889999987665554444 4445554
No 127
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=25.85 E-value=48 Score=18.93 Aligned_cols=26 Identities=23% Similarity=0.006 Sum_probs=16.8
Q ss_pred CCeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 3 TFLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 3 ~k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
.++||||||=-.....++. .|.+.|.
T Consensus 1 ~~~ilivdd~~~~~~~l~~---~L~~~~~ 26 (124)
T 1mb3_A 1 TKKVLIVEDNELNMKLFHD---LLEAQGY 26 (124)
T ss_dssp CCEEEEECSCHHHHHHHHH---HHHHTTC
T ss_pred CcEEEEEcCCHHHHHHHHH---HHHHcCc
Confidence 3689999987665555544 4445554
No 128
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=25.72 E-value=58 Score=20.47 Aligned_cols=30 Identities=7% Similarity=-0.067 Sum_probs=18.0
Q ss_pred CCeEEEEeeeechhHHHHHHHHHHHhCCCCEEE
Q 034410 3 TFLCSQVEDIVDTGTTLSSLIANLVSKGASSVS 35 (95)
Q Consensus 3 ~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~ 35 (95)
++.|++.. .+|..-..+...|++.|.+.++
T Consensus 80 ~~~ivvyC---~~G~rS~~aa~~L~~~G~~~v~ 109 (148)
T 2fsx_A 80 ERPVIFLC---RSGNRSIGAAEVATEAGITPAY 109 (148)
T ss_dssp -CCEEEEC---SSSSTHHHHHHHHHHTTCCSEE
T ss_pred CCEEEEEc---CCChhHHHHHHHHHHcCCcceE
Confidence 45566665 4565555667777777766543
No 129
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=25.22 E-value=54 Score=19.31 Aligned_cols=27 Identities=22% Similarity=-0.049 Sum_probs=17.5
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
...+||||||=-.... .+.+.|.+.|.
T Consensus 5 ~~~~iLivdd~~~~~~---~l~~~l~~~g~ 31 (140)
T 3grc_A 5 PRPRILICEDDPDIAR---LLNLMLEKGGF 31 (140)
T ss_dssp CCSEEEEECSCHHHHH---HHHHHHHHTTC
T ss_pred CCCCEEEEcCCHHHHH---HHHHHHHHCCC
Confidence 3579999998554444 44455566665
No 130
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=24.97 E-value=91 Score=18.33 Aligned_cols=30 Identities=17% Similarity=0.166 Sum_probs=18.6
Q ss_pred CCeEEEEeeeechhHHHHHHHHHHHhCCCCEEE
Q 034410 3 TFLCSQVEDIVDTGTTLSSLIANLVSKGASSVS 35 (95)
Q Consensus 3 ~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~ 35 (95)
..+||||||=-.....++.+ |...|...+.
T Consensus 2 ~~~ILivdD~~~~~~~l~~~---L~~~g~~~v~ 31 (133)
T 2r25_B 2 SVKILVVEDNHVNQEVIKRM---LNLEGIENIE 31 (133)
T ss_dssp CSCEEEECSCHHHHHHHHHH---HHHTTCCCEE
T ss_pred CceEEEEcCCHHHHHHHHHH---HHHcCCceEE
Confidence 45799999976665555554 4445654443
No 131
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=24.32 E-value=48 Score=19.97 Aligned_cols=27 Identities=11% Similarity=0.028 Sum_probs=16.8
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
.+.+||||||=-... ..+.+.|.+.|.
T Consensus 14 ~~~~iLivdd~~~~~---~~l~~~L~~~~~ 40 (152)
T 3eul_A 14 EKVRVVVGDDHPLFR---EGVVRALSLSGS 40 (152)
T ss_dssp CCEEEEEECSSHHHH---HHHHHHHHHHSS
T ss_pred ceEEEEEEcCCHHHH---HHHHHHHhhCCC
Confidence 357899999854444 444455555553
No 132
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=24.12 E-value=52 Score=24.24 Aligned_cols=36 Identities=14% Similarity=0.025 Sum_probs=29.7
Q ss_pred CeEEEEeeeechhHHHHHHHHHHHhCCC-CEEEEEEE
Q 034410 4 FLCSQVEDIVDTGTTLSSLIANLVSKGA-SSVSVCTL 39 (95)
Q Consensus 4 k~vliVDDIidTG~Tl~~~~~~l~~~g~-~~i~~~~l 39 (95)
.+||++||+-..-..+.....+|+.+|. +.++-+++
T Consensus 213 g~ILfLEdv~e~py~idRmL~qL~~aG~~~~~~Giil 249 (311)
T 1zl0_A 213 GSILVLEDVGEPYYRLERSLWQLLESIDARQLGAICL 249 (311)
T ss_dssp TCEEEEEEESCCHHHHHHHHHHHHHHTTGGGCSEEEE
T ss_pred CcEEEEEeCCCCHHHHHHHHHHHHHcCccccCCEEEE
Confidence 4799999999999999999999999886 44555444
No 133
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=24.10 E-value=51 Score=18.73 Aligned_cols=26 Identities=23% Similarity=0.139 Sum_probs=15.8
Q ss_pred CCeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 3 TFLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 3 ~k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
..+||||||=-.....+. +.|.+.|.
T Consensus 5 ~~~ilivdd~~~~~~~l~---~~L~~~g~ 30 (127)
T 2gkg_A 5 SKKILIVESDTALSATLR---SALEGRGF 30 (127)
T ss_dssp -CEEEEECSCHHHHHHHH---HHHHHHTC
T ss_pred CCeEEEEeCCHHHHHHHH---HHHHhcCc
Confidence 468999998655544444 44544554
No 134
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=23.98 E-value=44 Score=20.18 Aligned_cols=27 Identities=15% Similarity=0.043 Sum_probs=14.5
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
.+.+||||||=-... ..+.+.|.+.|.
T Consensus 13 ~~~~iLivdd~~~~~---~~l~~~L~~~g~ 39 (143)
T 3m6m_D 13 RSMRMLVADDHEANR---MVLQRLLEKAGH 39 (143)
T ss_dssp --CEEEEECSSHHHH---HHHHHHHHC--C
T ss_pred ccceEEEEeCCHHHH---HHHHHHHHHcCC
Confidence 346899999854443 344455555554
No 135
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=23.86 E-value=45 Score=19.65 Aligned_cols=24 Identities=21% Similarity=0.037 Sum_probs=14.6
Q ss_pred CCCCeEEEEeeeechhHHHHHHHH
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIA 24 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~ 24 (95)
|...+|||+||=-.....+..+.+
T Consensus 1 M~~~~Ilivdd~~~~~~~l~~~l~ 24 (133)
T 3b2n_A 1 MSLTSLIIAEDQNMLRQAMVQLIK 24 (133)
T ss_dssp --CEEEEEECSCHHHHHHHHHHHH
T ss_pred CCceEEEEECCCHHHHHHHHHHHh
Confidence 455689999987655555544433
No 136
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=23.84 E-value=58 Score=19.13 Aligned_cols=27 Identities=19% Similarity=0.064 Sum_probs=17.1
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
+..+||||||=-..... +.+.|.+.|.
T Consensus 6 ~~~~iLivdd~~~~~~~---l~~~L~~~g~ 32 (142)
T 3cg4_A 6 HKGDVMIVDDDAHVRIA---VKTILSDAGF 32 (142)
T ss_dssp CCCEEEEECSCHHHHHH---HHHHHHHTTC
T ss_pred CCCeEEEEcCCHHHHHH---HHHHHHHCCe
Confidence 46789999986544444 4445555564
No 137
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=23.71 E-value=57 Score=19.38 Aligned_cols=24 Identities=8% Similarity=-0.014 Sum_probs=17.5
Q ss_pred CCCeEEEEeeeechhHHHHHHHHH
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIAN 25 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~ 25 (95)
.+.+||||||=-.....+....+.
T Consensus 7 ~~~~iLivd~~~~~~~~l~~~L~~ 30 (147)
T 2zay_A 7 KWWRIMLVDTQLPALAASISALSQ 30 (147)
T ss_dssp -CEEEEEECTTGGGGHHHHHHHHH
T ss_pred CCceEEEEeCCHHHHHHHHHHHHH
Confidence 457899999987777777666554
No 138
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=23.68 E-value=56 Score=19.02 Aligned_cols=26 Identities=19% Similarity=0.040 Sum_probs=16.8
Q ss_pred CCeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 3 TFLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 3 ~k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
.++||||||=-. ....+...|++.|.
T Consensus 2 ~~~ILivdd~~~---~~~~l~~~l~~~g~ 27 (122)
T 3gl9_A 2 SKKVLLVDDSAV---LRKIVSFNLKKEGY 27 (122)
T ss_dssp CCEEEEECSCHH---HHHHHHHHHHHTTC
T ss_pred CceEEEEeCCHH---HHHHHHHHHHHCCc
Confidence 368999998544 33444556666665
No 139
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=23.54 E-value=55 Score=18.14 Aligned_cols=26 Identities=15% Similarity=0.054 Sum_probs=16.5
Q ss_pred CCeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 3 TFLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 3 ~k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
+++||||||=-.... .+.+.|.+.|.
T Consensus 1 ~~~iliv~~~~~~~~---~l~~~l~~~g~ 26 (119)
T 2j48_A 1 AGHILLLEEEDEAAT---VVCEMLTAAGF 26 (119)
T ss_dssp CCEEEEECCCHHHHH---HHHHHHHHTTC
T ss_pred CCEEEEEeCCHHHHH---HHHHHHHhCCc
Confidence 578999998654444 44455555665
No 140
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=23.27 E-value=57 Score=20.04 Aligned_cols=30 Identities=13% Similarity=0.037 Sum_probs=18.6
Q ss_pred CCeEEEEeeeechhHHHHHHHHHHHhCCCCEEE
Q 034410 3 TFLCSQVEDIVDTGTTLSSLIANLVSKGASSVS 35 (95)
Q Consensus 3 ~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~ 35 (95)
++.|+++.. +|..-..+...|++.|.+.++
T Consensus 82 ~~~ivvyC~---~G~rs~~aa~~L~~~G~~~v~ 111 (129)
T 1tq1_A 82 SDNIIVGCQ---SGGRSIKATTDLLHAGFTGVK 111 (129)
T ss_dssp TSSEEEEES---SCSHHHHHHHHHHHHHCCSEE
T ss_pred CCeEEEECC---CCcHHHHHHHHHHHcCCCCeE
Confidence 455666543 566666677777777765543
No 141
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=23.23 E-value=43 Score=20.25 Aligned_cols=18 Identities=22% Similarity=-0.082 Sum_probs=12.2
Q ss_pred CCCeEEEEeeeechhHHH
Q 034410 2 HTFLCSQVEDIVDTGTTL 19 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl 19 (95)
.+.+||||||=-.....+
T Consensus 3 ~~~~ILivdd~~~~~~~l 20 (151)
T 3kcn_A 3 LNERILLVDDDYSLLNTL 20 (151)
T ss_dssp CCCEEEEECSCHHHHHHH
T ss_pred CCCeEEEEeCCHHHHHHH
Confidence 568999999954443333
No 142
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=23.07 E-value=62 Score=19.03 Aligned_cols=27 Identities=30% Similarity=0.297 Sum_probs=17.4
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
.+.+||||||=-.....+ .+.|.+.|.
T Consensus 14 ~~~~ilivdd~~~~~~~l---~~~L~~~g~ 40 (138)
T 2b4a_A 14 QPFRVTLVEDEPSHATLI---QYHLNQLGA 40 (138)
T ss_dssp CCCEEEEECSCHHHHHHH---HHHHHHTTC
T ss_pred CCCeEEEECCCHHHHHHH---HHHHHHcCC
Confidence 467899999865554444 445555564
No 143
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=23.01 E-value=1.4e+02 Score=18.27 Aligned_cols=30 Identities=17% Similarity=-0.075 Sum_probs=21.5
Q ss_pred CCeEEEEeeeechhHHHHHHHHHHHhCCCCEEE
Q 034410 3 TFLCSQVEDIVDTGTTLSSLIANLVSKGASSVS 35 (95)
Q Consensus 3 ~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~ 35 (95)
++.|++.. .+|..-..+...|++.|.+.++
T Consensus 91 ~~~ivvyC---~~G~rs~~aa~~L~~~G~~~v~ 120 (139)
T 3d1p_A 91 AKELIFYC---ASGKRGGEAQKVASSHGYSNTS 120 (139)
T ss_dssp TSEEEEEC---SSSHHHHHHHHHHHTTTCCSEE
T ss_pred CCeEEEEC---CCCchHHHHHHHHHHcCCCCeE
Confidence 46676665 4687777888888888876543
No 144
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=22.95 E-value=58 Score=18.97 Aligned_cols=26 Identities=27% Similarity=0.060 Sum_probs=16.5
Q ss_pred CCeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 3 TFLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 3 ~k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
+++||||||=-.....+ ...|...|.
T Consensus 3 ~~~ilivdd~~~~~~~l---~~~L~~~g~ 28 (136)
T 1mvo_A 3 NKKILVVDDEESIVTLL---QYNLERSGY 28 (136)
T ss_dssp CCEEEEECSCHHHHHHH---HHHHHHTTC
T ss_pred CCEEEEEECCHHHHHHH---HHHHHHCCc
Confidence 57899999865544444 444555554
No 145
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=22.88 E-value=87 Score=18.32 Aligned_cols=34 Identities=15% Similarity=0.151 Sum_probs=27.4
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEE
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSV 36 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~ 36 (95)
.|+.++=|+..--+|.|..++.+.|++.|- ++.+
T Consensus 43 ~GD~Il~VNG~~v~~~~~~evv~llr~~g~-~V~L 76 (82)
T 1r6j_A 43 TEHNICEINGQNVIGLKDSQIADILSTSGT-VVTI 76 (82)
T ss_dssp SSEEEEEETTEECTTCCHHHHHHHHHHSCS-EEEE
T ss_pred CCCEEEEECCEEcCCCCHHHHHHHHhcCCC-EEEE
Confidence 467899999999999999999999996553 4443
No 146
>3nze_A Putative transcriptional regulator, sugar-binding; structural genomics, PSI-2, protein structure initiative; 1.70A {Arthrobacter aurescens} SCOP: c.124.1.0
Probab=22.47 E-value=28 Score=24.86 Aligned_cols=27 Identities=33% Similarity=0.325 Sum_probs=18.3
Q ss_pred echhHHHHHHHHHHHhCCCCEEEEEEE
Q 034410 13 VDTGTTLSSLIANLVSKGASSVSVCTL 39 (95)
Q Consensus 13 idTG~Tl~~~~~~l~~~g~~~i~~~~l 39 (95)
+.+|+||.++++.|.....+.+.++.|
T Consensus 62 v~wG~T~~~v~~~l~~~~~~~~~vV~l 88 (267)
T 3nze_A 62 VAWGATLSAVSRHLTRKMTHDSIVVQL 88 (267)
T ss_dssp ECCSHHHHHHHHTCCCCCCSSCEEEEC
T ss_pred ECCCHHHHHHHHhcCccCCCCCEEEEC
Confidence 368888888888886544445555544
No 147
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=22.36 E-value=91 Score=18.69 Aligned_cols=29 Identities=3% Similarity=-0.075 Sum_probs=25.3
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCC
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKG 30 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g 30 (95)
.|..|+=|++.--++.|..++.+.|+...
T Consensus 62 ~GD~Il~Vng~~~~~~~~~~~~~~l~~~~ 90 (109)
T 1wi4_A 62 PGDQLVSINKESMIGVSFEEAKSIITRAK 90 (109)
T ss_dssp TTCBEEEETTSCCTTCCHHHHHHHHHHSC
T ss_pred CCCEEEEECCEECCCCCHHHHHHHHHccc
Confidence 47888999999888989999999998876
No 148
>2gnp_A Transcriptional regulator; structural genomics, MCSG, APC84799, streptococcus pneumonia PSI, protein structure initiative; 1.65A {Streptococcus pneumoniae} SCOP: c.124.1.8
Probab=22.20 E-value=32 Score=24.43 Aligned_cols=28 Identities=29% Similarity=0.350 Sum_probs=18.4
Q ss_pred echhHHHHHHHHHHHhCCCCEEEEEEEE
Q 034410 13 VDTGTTLSSLIANLVSKGASSVSVCTLL 40 (95)
Q Consensus 13 idTG~Tl~~~~~~l~~~g~~~i~~~~l~ 40 (95)
+.||+|+..+++.|.....+.+.++-|.
T Consensus 63 la~G~T~~~~~~~l~~~~~~~v~~v~L~ 90 (266)
T 2gnp_A 63 FSWGKSLSNLVDLIHSKSVRNVHFYPLA 90 (266)
T ss_dssp ECCSHHHHHHHHHCCCCCCSSCEEEESB
T ss_pred ECChHHHHHHHHhccccCCCCCEEEECC
Confidence 3688888888888865444455555544
No 149
>1jr3_A DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1xxh_B* 3glh_B* 3glf_B* 3gli_B* 3glg_B* 1xxi_B*
Probab=22.18 E-value=1.8e+02 Score=20.34 Aligned_cols=37 Identities=11% Similarity=0.188 Sum_probs=22.3
Q ss_pred CCeEEEEeeeec-hhHHHHHHHHHHHhCCCCEEEEEEEE
Q 034410 3 TFLCSQVEDIVD-TGTTLSSLIANLVSKGASSVSVCTLL 40 (95)
Q Consensus 3 ~k~vliVDDIid-TG~Tl~~~~~~l~~~g~~~i~~~~l~ 40 (95)
+++|++|||+=. +..+...+.+.+.+. +..+.++...
T Consensus 119 ~~~vliiDe~~~l~~~~~~~Ll~~le~~-~~~~~~Il~~ 156 (373)
T 1jr3_A 119 RFKVYLIDEVHMLSRHSFNALLKTLEEP-PEHVKFLLAT 156 (373)
T ss_dssp SSEEEEEECGGGSCHHHHHHHHHHHHSC-CSSEEEEEEE
T ss_pred CeEEEEEECcchhcHHHHHHHHHHHhcC-CCceEEEEEe
Confidence 468999999733 345566677777654 3344444333
No 150
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=22.17 E-value=1.2e+02 Score=18.13 Aligned_cols=29 Identities=14% Similarity=0.210 Sum_probs=21.8
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCE
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASS 33 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~ 33 (95)
+++.++++ ..+|..-..+++.|++.|.+.
T Consensus 55 ~~~~ivv~---C~~G~rS~~aa~~L~~~G~~~ 83 (103)
T 3iwh_A 55 KNEIYYIV---CAGGVRSAKVVEYLEANGIDA 83 (103)
T ss_dssp TTSEEEEE---CSSSSHHHHHHHHHHTTTCEE
T ss_pred CCCeEEEE---CCCCHHHHHHHHHHHHcCCCE
Confidence 35667775 468888888889999999854
No 151
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=22.11 E-value=60 Score=19.11 Aligned_cols=27 Identities=7% Similarity=-0.134 Sum_probs=16.5
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
...+||||||=-.....+. +.|.+.|.
T Consensus 6 ~~~~ILivdd~~~~~~~l~---~~L~~~g~ 32 (143)
T 2qvg_A 6 DKVDILYLEDDEVDIQSVE---RVFHKISS 32 (143)
T ss_dssp -CCSEEEECCCHHHHHHHH---HHHHHHCT
T ss_pred CCCeEEEEeCCHHHHHHHH---HHHHHhCC
Confidence 3468999998665555444 44555554
No 152
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=22.03 E-value=58 Score=18.86 Aligned_cols=27 Identities=11% Similarity=-0.075 Sum_probs=16.2
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
.+.+||||||=-..... +.+.|.+.|.
T Consensus 5 ~~~~ilivdd~~~~~~~---l~~~L~~~g~ 31 (132)
T 3lte_A 5 QSKRILVVDDDQAMAAA---IERVLKRDHW 31 (132)
T ss_dssp --CEEEEECSCHHHHHH---HHHHHHHTTC
T ss_pred CCccEEEEECCHHHHHH---HHHHHHHCCc
Confidence 35789999985544444 4455555665
No 153
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=21.97 E-value=82 Score=23.25 Aligned_cols=37 Identities=14% Similarity=-0.032 Sum_probs=29.6
Q ss_pred CeEEEEeeeec----hhHHHHHHHHHHHhCCC-CEEEEEEEE
Q 034410 4 FLCSQVEDIVD----TGTTLSSLIANLVSKGA-SSVSVCTLL 40 (95)
Q Consensus 4 k~vliVDDIid----TG~Tl~~~~~~l~~~g~-~~i~~~~l~ 40 (95)
.+||++||+-. +-..+......|+.+|. ..++-+++-
T Consensus 225 g~ILfLEdv~e~~~~~py~idRmL~qL~~~G~~~~~~GiilG 266 (331)
T 4e5s_A 225 DKILFLEEDSLTGTSTLKTFDRYLHSLMQQQNFKHVKGIVIG 266 (331)
T ss_dssp TEEEEEECCSTTGGGHHHHHHHHHHHHHTSTTGGGCCEEEEE
T ss_pred CeEEEEEeCCCcCCCCHHHHHHHHHHHHHcCCcccCCEEEEe
Confidence 48999999999 78889999999999987 455554443
No 154
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=21.82 E-value=40 Score=20.39 Aligned_cols=25 Identities=12% Similarity=-0.104 Sum_probs=14.9
Q ss_pred CCCCeEEEEeeeechhHHHHHHHHHHHh
Q 034410 1 MHTFLCSQVEDIVDTGTTLSSLIANLVS 28 (95)
Q Consensus 1 ~~~k~vliVDDIidTG~Tl~~~~~~l~~ 28 (95)
|+..+||||||=-..... +.+.|.+
T Consensus 3 ~~~~~ILivdd~~~~~~~---l~~~L~~ 27 (153)
T 3cz5_A 3 LSTARIMLVDDHPIVREG---YRRLIER 27 (153)
T ss_dssp -CCEEEEEECSCHHHHHH---HHHHHTT
T ss_pred CcccEEEEECCcHHHHHH---HHHHHhh
Confidence 356789999986544443 3444544
No 155
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=21.81 E-value=1.5e+02 Score=20.42 Aligned_cols=32 Identities=9% Similarity=-0.028 Sum_probs=23.6
Q ss_pred CCCeEEEEeeeechhH-HHHHHHHHHHhCCCCEEEE
Q 034410 2 HTFLCSQVEDIVDTGT-TLSSLIANLVSKGASSVSV 36 (95)
Q Consensus 2 ~~k~vliVDDIidTG~-Tl~~~~~~l~~~g~~~i~~ 36 (95)
+++.|++.+ ++|. ....+...|+..|.+.|++
T Consensus 78 ~~~~ivvyc---~~g~~~s~~a~~~L~~~G~~~v~~ 110 (285)
T 1uar_A 78 NDTTVVLYG---DKNNWWAAYAFWFFKYNGHKDVRL 110 (285)
T ss_dssp TTCEEEEEC---HHHHHHHHHHHHHHHHTTCSCEEE
T ss_pred CCCeEEEEC---CCCCccHHHHHHHHHHcCCCCeEE
Confidence 357788886 4666 5667888899999887664
No 156
>3g23_A Peptidase U61, LD-carboxypeptidase A; flavodoxin-like fold, catalytic triad, merops S66 unassigned peptidases family; HET: MSE; 1.89A {Novosphingobium aromaticivorans}
Probab=21.18 E-value=51 Score=23.76 Aligned_cols=36 Identities=14% Similarity=0.140 Sum_probs=28.6
Q ss_pred CeEEEEeeeechhHHHHHHHHHHHhCCC-CEEEEEEE
Q 034410 4 FLCSQVEDIVDTGTTLSSLIANLVSKGA-SSVSVCTL 39 (95)
Q Consensus 4 k~vliVDDIidTG~Tl~~~~~~l~~~g~-~~i~~~~l 39 (95)
.+||++||+-+.=..+.....+|+..|. ..++-.++
T Consensus 186 g~ILflEdv~e~py~idRmL~qL~~~G~~~~~~Giil 222 (274)
T 3g23_A 186 GHVVMIEEVAEHHYAVDRLLFHVTSCLADAGIAGLRL 222 (274)
T ss_dssp TCEEEEEEESCCHHHHHHHHHHHHHHHTTTTCSEEEE
T ss_pred CcEEEEEeCCCCHHHHHHHHHHHHHcCCcccCCeEEE
Confidence 4799999999999999999999998875 44444443
No 157
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=20.94 E-value=85 Score=18.25 Aligned_cols=27 Identities=30% Similarity=-0.006 Sum_probs=17.3
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCC
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGA 31 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~ 31 (95)
...+||||||=-.....+... |.+.|.
T Consensus 8 ~~~~iLivdd~~~~~~~l~~~---L~~~g~ 34 (140)
T 3cg0_A 8 DLPGVLIVEDGRLAAATLRIQ---LESLGY 34 (140)
T ss_dssp CCCEEEEECCBHHHHHHHHHH---HHHHTC
T ss_pred CCceEEEEECCHHHHHHHHHH---HHHCCC
Confidence 457899999876555555544 444454
No 158
>1lk5_A D-ribose-5-phosphate isomerase; alpha/beta structure; 1.75A {Pyrococcus horikoshii} SCOP: c.124.1.4 d.58.40.1 PDB: 1lk7_A*
Probab=20.86 E-value=58 Score=22.99 Aligned_cols=17 Identities=35% Similarity=0.386 Sum_probs=14.6
Q ss_pred echhHHHHHHHHHHHhC
Q 034410 13 VDTGTTLSSLIANLVSK 29 (95)
Q Consensus 13 idTG~Tl~~~~~~l~~~ 29 (95)
++||+|..++++.|.+.
T Consensus 26 LdsGST~~~~a~~L~~~ 42 (229)
T 1lk5_A 26 LGTGSTTAYFIKLLGEK 42 (229)
T ss_dssp ECCSHHHHHHHHHHHHH
T ss_pred EcChHHHHHHHHHHhhh
Confidence 57999999999999643
No 159
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=20.61 E-value=1.2e+02 Score=20.67 Aligned_cols=32 Identities=16% Similarity=0.043 Sum_probs=22.9
Q ss_pred CCCeEEEEeeeechhH-HHHHHHHHHHhCCCCEEEE
Q 034410 2 HTFLCSQVEDIVDTGT-TLSSLIANLVSKGASSVSV 36 (95)
Q Consensus 2 ~~k~vliVDDIidTG~-Tl~~~~~~l~~~g~~~i~~ 36 (95)
+++.|+|.++ +|. ....+...|+..|.+.++.
T Consensus 80 ~~~~vvvyc~---~g~~~s~~a~~~L~~~G~~~v~~ 112 (271)
T 1e0c_A 80 PEAVYVVYDD---EGGGWAGRFIWLLDVIGQQRYHY 112 (271)
T ss_dssp TTCEEEEECS---SSSHHHHHHHHHHHHTTCCCEEE
T ss_pred CCCeEEEEcC---CCCccHHHHHHHHHHcCCCCeEE
Confidence 3577888874 564 5566778899999887653
No 160
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=20.54 E-value=1.3e+02 Score=17.69 Aligned_cols=34 Identities=15% Similarity=0.020 Sum_probs=26.5
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEE
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVS 35 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~ 35 (95)
.|..|+=|++.--++.|..++.+.++......+.
T Consensus 65 ~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~ 98 (108)
T 2d92_A 65 PGDRLVSVNEYCLDNTSLAEAVEILKAVPPGLVH 98 (108)
T ss_dssp TTCEEEEESSCBCTTCCHHHHHHHHHHSCSEEEE
T ss_pred CCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEE
Confidence 4678888998888888899999999886544443
No 161
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A
Probab=20.52 E-value=77 Score=20.63 Aligned_cols=31 Identities=13% Similarity=-0.036 Sum_probs=21.4
Q ss_pred eechhH---HHHHHHHHHHhCCCCEEEEEEEEEc
Q 034410 12 IVDTGT---TLSSLIANLVSKGASSVSVCTLLDK 42 (95)
Q Consensus 12 IidTG~---Tl~~~~~~l~~~g~~~i~~~~l~~k 42 (95)
++|||. ....+.+.+++.+++.|+.+.+-+-
T Consensus 36 LiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~ 69 (227)
T 3iog_A 36 VVGATWTPDTARELHKLIKRVSRKPVLEVINTNY 69 (227)
T ss_dssp EESCCSSHHHHHHHHHHHHTTCCSCEEEEECSSS
T ss_pred EEECCCChHHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 466885 4556778888777888877765443
No 162
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=20.45 E-value=71 Score=19.94 Aligned_cols=32 Identities=9% Similarity=-0.113 Sum_probs=22.0
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCCCCEEEE
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKGASSVSV 36 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g~~~i~~ 36 (95)
+++.|++.. .+|..-..+...|++.|.+.++.
T Consensus 81 ~~~~ivvyC---~~G~rS~~aa~~L~~~G~~~v~~ 112 (137)
T 1qxn_A 81 PEKPVVVFC---KTAARAALAGKTLREYGFKTIYN 112 (137)
T ss_dssp TTSCEEEEC---CSSSCHHHHHHHHHHHTCSCEEE
T ss_pred CCCeEEEEc---CCCcHHHHHHHHHHHcCCcceEE
Confidence 356677765 46776667788888888776543
No 163
>3mvn_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M diaminopimelate ligase; structural genomics, MCSG, PSI-2; 1.90A {Haemophilus ducreyi}
Probab=20.31 E-value=1.3e+02 Score=19.37 Aligned_cols=25 Identities=20% Similarity=0.251 Sum_probs=21.5
Q ss_pred eEEEEeeeechhHHHHHHHHHHHhC
Q 034410 5 LCSQVEDIVDTGTTLSSLIANLVSK 29 (95)
Q Consensus 5 ~vliVDDIidTG~Tl~~~~~~l~~~ 29 (95)
.+.+|||-.-+-..++++++.|++.
T Consensus 36 g~~vi~DyaHnP~si~a~l~al~~~ 60 (163)
T 3mvn_A 36 NITVYDDFAHHPTAITATIDALRAK 60 (163)
T ss_dssp TEEEEEECCCSHHHHHHHHHHHHHH
T ss_pred CcEEEEcCCCCHHHHHHHHHHHHHh
Confidence 5788999878999999999999863
No 164
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=20.31 E-value=59 Score=19.35 Aligned_cols=25 Identities=8% Similarity=-0.090 Sum_probs=16.2
Q ss_pred CCeEEEEeeeechhHHHHHHHHHHHhCC
Q 034410 3 TFLCSQVEDIVDTGTTLSSLIANLVSKG 30 (95)
Q Consensus 3 ~k~vliVDDIidTG~Tl~~~~~~l~~~g 30 (95)
+.+||||||=-..... +.+.|.+.|
T Consensus 20 ~~~ilivdd~~~~~~~---l~~~L~~~g 44 (146)
T 4dad_A 20 MINILVASEDASRLAH---LARLVGDAG 44 (146)
T ss_dssp GCEEEEECSCHHHHHH---HHHHHHHHC
T ss_pred CCeEEEEeCCHHHHHH---HHHHHhhCC
Confidence 5789999986554444 445555555
No 165
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=20.18 E-value=1.3e+02 Score=17.02 Aligned_cols=29 Identities=14% Similarity=-0.015 Sum_probs=25.2
Q ss_pred CCCeEEEEeeeechhHHHHHHHHHHHhCC
Q 034410 2 HTFLCSQVEDIVDTGTTLSSLIANLVSKG 30 (95)
Q Consensus 2 ~~k~vliVDDIidTG~Tl~~~~~~l~~~g 30 (95)
.|..|+=|++.--+|.|..++.+.|+..+
T Consensus 49 ~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 77 (93)
T 3o46_A 49 VGDELREVNGIPVEDKRPEEIIQILAQSQ 77 (93)
T ss_dssp TTCEEEEETTEESTTSCHHHHHHHHHHCC
T ss_pred CCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 47888899998889999999999998765
No 166
>2o0m_A Transcriptional regulator, SORC family; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Enterococcus faecalis} SCOP: c.124.1.8
Probab=20.17 E-value=37 Score=24.84 Aligned_cols=28 Identities=21% Similarity=0.106 Sum_probs=19.9
Q ss_pred echhHHHHHHHHHHHhC--CCCEEEEEEEE
Q 034410 13 VDTGTTLSSLIANLVSK--GASSVSVCTLL 40 (95)
Q Consensus 13 idTG~Tl~~~~~~l~~~--g~~~i~~~~l~ 40 (95)
++||+|+..+++.|... ..+.+.++.|.
T Consensus 148 l~~GsT~~~~~~~L~~~~~~~~~v~vv~l~ 177 (345)
T 2o0m_A 148 VMGGTTMAMVAENMGSLETEKRHNLFVPAR 177 (345)
T ss_dssp ECCSHHHHHHHHTCCCCCCSSEEEEEEESB
T ss_pred ECCcHHHHHHHHHhhhccCCCCCcEEEEcC
Confidence 47999999999999653 23456666543
Done!