Query 034415
Match_columns 95
No_of_seqs 101 out of 1004
Neff 6.0
Searched_HMMs 13730
Date Mon Mar 25 03:32:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034415.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/034415hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1cmwa2 c.120.1.2 (A:10-173) 5 100.0 5.2E-35 3.8E-39 202.8 8.7 89 1-89 62-151 (164)
2 d1tfra2 c.120.1.2 (A:12-180) T 100.0 2.6E-32 1.9E-36 191.3 8.1 90 2-91 66-165 (169)
3 d1xo1a2 c.120.1.2 (A:19-185) T 100.0 2.1E-31 1.5E-35 185.5 6.1 90 1-90 54-154 (167)
4 d1b43a2 c.120.1.2 (A:1-219) Fl 96.6 0.001 7.5E-08 45.7 4.3 46 25-75 130-175 (219)
5 d1a77a2 c.120.1.2 (A:2-208) Fl 96.3 0.0024 1.7E-07 43.5 4.5 51 25-80 130-181 (207)
6 d1ul1x2 c.120.1.2 (X:2-217) Fl 96.2 0.0033 2.4E-07 42.5 4.8 52 26-82 137-189 (216)
7 d1rxwa2 c.120.1.2 (A:3-219) Fl 95.6 0.0096 7E-07 40.5 5.3 50 26-80 129-179 (217)
8 d1j2ra_ c.33.1.3 (A:) Hypothet 91.7 0.11 7.8E-06 33.6 4.3 43 28-70 111-153 (188)
9 d1im5a_ c.33.1.3 (A:) Pyrazina 91.5 0.12 8.6E-06 33.0 4.3 43 28-70 109-151 (179)
10 d1nf9a_ c.33.1.3 (A:) Phenazin 89.4 0.22 1.6E-05 33.0 4.3 42 29-70 133-174 (207)
11 d1yaca_ c.33.1.3 (A:) YcaC {Es 88.7 0.14 9.9E-06 34.1 2.9 44 27-70 93-136 (204)
12 d1o4wa_ c.120.1.1 (A:) Hypothe 86.2 0.13 9.4E-06 31.8 1.4 47 37-89 68-116 (125)
13 d1nbaa_ c.33.1.3 (A:) N-carbam 82.4 0.59 4.3E-05 32.1 3.7 43 28-70 148-190 (253)
14 d7reqb2 c.23.6.1 (B:476-638) M 71.0 1.1 7.8E-05 28.9 2.2 53 22-78 49-103 (163)
15 d1mkza_ c.57.1.1 (A:) MoaB {Es 69.8 6.1 0.00045 24.9 5.8 49 27-75 29-84 (170)
16 d1v96a1 c.120.1.1 (A:2-149) Hy 68.5 0.8 5.8E-05 28.9 1.1 36 47-87 95-132 (148)
17 d1x9ga_ c.33.1.3 (A:) Ribonucl 62.7 2.9 0.00021 26.7 3.1 35 36-70 97-131 (192)
18 d1nw9b_ c.17.1.1 (B:) Caspase- 62.1 8.1 0.00059 25.3 5.5 35 26-60 48-82 (277)
19 d1uuya_ c.57.1.1 (A:) Plant CN 61.4 10 0.00076 23.7 5.7 48 28-75 27-86 (161)
20 d2h1ca1 c.120.1.1 (A:1-138) Tr 61.2 1.5 0.00011 26.0 1.3 33 48-88 103-137 (138)
21 d1y5ea1 c.57.1.1 (A:12-166) Mo 60.3 9.4 0.00068 23.4 5.2 50 26-75 22-78 (155)
22 g1nme.1 c.17.1.1 (A:,B:) Apopa 59.3 7.9 0.00057 25.3 4.9 36 25-60 42-77 (238)
23 d1di6a_ c.57.1.1 (A:) MogA {Es 59.0 6.3 0.00046 25.9 4.4 46 27-72 25-74 (190)
24 d1f1ja_ c.17.1.1 (A:) Caspase- 58.0 9.6 0.0007 24.8 5.2 36 25-60 36-71 (245)
25 d1dt9a2 d.79.3.2 (A:277-422) C 57.9 1.7 0.00012 27.6 1.1 33 47-79 94-128 (146)
26 d2f7wa1 c.57.1.1 (A:2-174) Mog 57.6 6.7 0.00048 24.6 4.2 46 26-71 24-73 (173)
27 d1g2ia_ c.23.16.2 (A:) Intrace 57.6 5.1 0.00037 24.6 3.5 39 38-77 3-42 (166)
28 d1jlja_ c.57.1.1 (A:) Gephyrin 57.6 13 0.00095 22.8 5.6 47 26-72 24-75 (169)
29 d1p80a1 c.23.16.3 (A:598-753) 55.4 5.5 0.0004 24.4 3.4 37 38-75 6-42 (156)
30 d1x52a1 d.79.3.2 (A:8-118) Cel 52.9 4.4 0.00032 24.4 2.5 29 49-77 66-96 (111)
31 d1r9ja2 c.36.1.10 (A:1-336) Tr 51.6 16 0.0011 25.6 5.7 43 27-69 199-243 (336)
32 d1l2ta_ c.37.1.12 (A:) MJ0796 51.5 6.7 0.00049 26.3 3.5 41 45-86 178-219 (230)
33 d1dnpa2 c.28.1.1 (A:1-200) DNA 50.3 25 0.0018 22.1 6.2 54 22-75 54-107 (200)
34 d2b8ea1 c.108.1.7 (A:416-434,A 50.2 6.5 0.00047 24.0 3.0 25 50-75 25-49 (135)
35 d2aama1 c.1.8.15 (A:28-312) Hy 49.4 12 0.00085 25.7 4.6 55 20-75 211-272 (285)
36 d2qi2a3 d.79.3.2 (A:244-338) C 49.3 2.6 0.00019 24.9 1.0 52 26-77 27-81 (95)
37 d2vgna3 d.79.3.2 (A:278-381) D 49.3 4.7 0.00034 23.9 2.2 52 26-77 25-85 (104)
38 d2ftsa3 c.57.1.2 (A:499-653) G 49.3 21 0.0015 21.7 5.6 52 26-79 29-89 (155)
39 d1sy7a1 c.23.16.3 (A:553-736) 48.6 11 0.00083 23.0 4.1 37 38-75 6-42 (184)
40 d1rzua_ c.87.1.8 (A:) Glycogen 47.4 9.7 0.0007 26.6 4.0 23 50-72 21-43 (477)
41 d2bisa1 c.87.1.8 (A:1-437) Gly 46.2 7.2 0.00052 26.1 3.0 26 48-73 18-43 (437)
42 g1pyo.1 c.17.1.1 (A:,B:) Caspa 45.9 17 0.0013 23.8 5.0 33 26-58 53-85 (257)
43 d1m72a_ c.17.1.1 (A:) Caspase- 45.4 17 0.0013 23.8 4.9 34 26-59 47-80 (256)
44 d1wpga2 c.108.1.7 (A:344-360,A 45.4 8.2 0.0006 24.3 3.0 17 59-75 32-48 (168)
45 g1sc3.1 c.17.1.1 (A:,B:) Inter 45.2 14 0.001 24.1 4.4 33 26-58 62-94 (261)
46 d2j07a2 c.28.1.1 (A:2-171) DNA 44.3 31 0.0023 21.2 6.2 49 22-74 49-97 (170)
47 d1ihua1 c.37.1.10 (A:1-296) Ar 43.9 9.7 0.00071 24.6 3.3 22 51-72 24-45 (296)
48 d2i09a2 d.327.1.1 (A:108-226) 43.4 7.3 0.00053 24.1 2.4 57 17-79 7-65 (119)
49 g1f2t.1 c.37.1.12 (A:,B:) Rad5 42.3 12 0.0009 23.6 3.6 29 58-87 252-281 (292)
50 d2nqra3 c.57.1.2 (A:178-326) M 41.0 27 0.002 21.3 5.0 52 26-79 29-89 (149)
51 d1ls1a2 c.37.1.10 (A:89-295) G 40.8 12 0.00084 24.5 3.3 32 43-74 18-49 (207)
52 d1b24a1 d.95.2.1 (A:7-99) DNA 40.6 9.2 0.00067 22.3 2.4 30 10-39 22-60 (93)
53 d2qy9a2 c.37.1.10 (A:285-495) 39.2 13 0.00092 24.5 3.3 32 43-74 17-48 (211)
54 d1gpua1 c.36.1.10 (A:3-337) Tr 38.6 26 0.0019 24.4 5.1 47 29-75 201-250 (335)
55 d1uz5a3 c.57.1.2 (A:181-328) M 37.5 36 0.0026 20.6 5.2 51 27-79 30-89 (148)
56 g1qtn.1 c.17.1.1 (A:,B:) Caspa 37.2 32 0.0023 22.0 5.2 34 26-59 45-78 (242)
57 d1w25a1 c.23.1.1 (A:2-140) Res 36.0 38 0.0027 19.8 5.7 33 43-75 55-87 (139)
58 d1nj1a1 c.51.1.1 (A:284-410) P 35.7 13 0.00097 21.9 2.8 53 20-75 26-78 (127)
59 d1vlja_ e.22.1.2 (A:) NADH-dep 35.5 41 0.003 23.3 5.8 43 26-68 52-97 (398)
60 d1okkd2 c.37.1.10 (D:97-303) G 35.2 16 0.0012 23.8 3.4 29 45-73 16-44 (207)
61 d2d00a1 c.149.1.1 (A:6-109) V- 35.0 37 0.0027 19.5 5.4 38 33-72 13-50 (104)
62 d1p5fa_ c.23.16.2 (A:) DJ-1 {H 34.9 42 0.003 20.5 5.3 35 39-74 5-40 (186)
63 d1g5ha1 c.51.1.1 (A:343-469) T 34.2 29 0.0021 20.3 4.3 56 20-75 25-80 (127)
64 d1jaya_ c.2.1.6 (A:) Coenzyme 33.9 14 0.0011 21.4 2.7 24 51-74 12-35 (212)
65 d1g6ha_ c.37.1.12 (A:) MJ1267 33.2 32 0.0023 22.7 4.7 60 26-86 159-224 (254)
66 d1j8yf2 c.37.1.10 (F:87-297) G 33.0 17 0.0012 23.8 3.2 32 43-74 20-51 (211)
67 d1wd7a_ c.113.1.1 (A:) Probabl 32.8 50 0.0036 21.1 5.6 46 27-72 137-185 (254)
68 d1oi4a1 c.23.16.2 (A:23-192) H 32.4 26 0.0019 21.3 3.9 36 38-74 4-39 (170)
69 d1wu2a3 c.57.1.2 (A:181-324) M 32.3 27 0.002 21.2 4.0 51 27-79 34-93 (144)
70 d2r8oa2 c.36.1.10 (A:2-332) Tr 32.3 40 0.0029 23.3 5.3 41 29-69 200-241 (331)
71 d2qy9a2 c.37.1.10 (A:285-495) 32.2 60 0.0044 20.9 6.7 47 25-71 52-99 (211)
72 d1zhva2 d.58.18.8 (A:62-127) H 32.1 17 0.0012 19.9 2.5 31 45-75 12-43 (66)
73 d1hdha_ c.76.1.2 (A:) Arylsulf 31.8 15 0.0011 25.5 2.8 30 46-75 286-318 (525)
74 d1np7a2 c.28.1.1 (A:1-204) Cry 31.4 53 0.0038 20.3 5.4 49 22-74 63-111 (204)
75 d1fsua_ c.76.1.2 (A:) Arylsulf 31.2 15 0.0011 25.5 2.8 29 47-75 231-262 (492)
76 d1p49a_ c.76.1.2 (A:) Steryl-s 30.9 15 0.0011 25.6 2.8 28 48-75 293-323 (553)
77 d2fyma1 c.1.11.1 (A:140-431) E 30.6 23 0.0017 24.6 3.6 54 14-72 125-178 (292)
78 d1jbea_ c.23.1.1 (A:) CheY pro 29.9 47 0.0034 19.0 5.6 15 25-39 16-30 (128)
79 d2fe1a1 c.120.1.1 (A:1-130) Co 29.9 9.4 0.00069 21.7 1.2 11 66-76 112-123 (130)
80 d1kvka2 d.58.26.3 (A:226-394) 29.6 30 0.0022 21.3 3.9 32 43-74 119-150 (169)
81 d1vmaa2 c.37.1.10 (A:82-294) G 29.4 18 0.0013 23.7 2.8 32 43-74 19-50 (213)
82 d2g2ca1 c.57.1.1 (A:1-163) Put 29.1 13 0.00094 22.9 1.9 47 28-75 30-83 (163)
83 d1em8a_ c.128.1.1 (A:) DNA pol 29.1 8.1 0.00059 23.8 0.9 29 51-79 24-53 (147)
84 d8abpa_ c.93.1.1 (A:) L-arabin 29.1 63 0.0046 20.3 5.8 52 22-74 16-68 (305)
85 d1vhqa_ c.23.16.2 (A:) Putativ 29.0 36 0.0026 22.1 4.3 35 44-79 15-50 (217)
86 d1vpla_ c.37.1.12 (A:) Putativ 28.9 21 0.0015 23.6 3.1 60 26-86 142-207 (238)
87 d1itza1 c.36.1.10 (A:10-347) T 28.1 62 0.0045 22.3 5.7 42 29-70 205-248 (338)
88 d1h70a_ d.126.1.3 (A:) Dimethy 28.0 23 0.0016 22.7 3.1 28 20-47 30-57 (255)
89 d1rrma_ e.22.1.2 (A:) Lactalde 27.8 45 0.0032 22.9 4.9 44 26-69 47-93 (385)
90 d3dhwc1 c.37.1.12 (C:1-240) Me 27.7 17 0.0012 24.4 2.4 41 46-86 174-215 (240)
91 d1wpxa1 c.69.1.5 (A:1-421) Ser 27.5 18 0.0013 25.2 2.6 15 61-75 325-339 (421)
92 d1ac5a_ c.69.1.5 (A:) Serine c 26.9 11 0.0008 27.1 1.4 15 61-75 370-384 (483)
93 d1xrsb1 c.23.6.1 (B:102-261) D 26.8 41 0.003 20.9 4.1 29 32-60 128-156 (160)
94 d1ivya_ c.69.1.5 (A:) Human 'p 26.6 20 0.0015 24.7 2.8 17 59-75 357-373 (452)
95 d1kwga3 c.23.16.5 (A:394-590) 26.3 35 0.0025 21.7 3.8 30 46-75 28-57 (197)
96 d1id1a_ c.2.1.9 (A:) Rck domai 26.0 36 0.0026 20.0 3.6 37 50-86 13-55 (153)
97 d1bvyf_ c.23.5.1 (F:) FMN-bind 25.8 61 0.0044 19.3 4.8 44 50-93 17-61 (152)
98 d1auka_ c.76.1.2 (A:) Arylsulf 25.8 21 0.0016 24.6 2.8 29 47-75 235-266 (485)
99 d1m7ja3 c.1.9.11 (A:62-419) N- 25.6 25 0.0018 24.3 3.1 56 14-70 99-160 (358)
100 d2bona1 e.52.1.2 (A:5-299) Lip 25.5 67 0.0049 20.8 5.3 52 26-78 17-70 (295)
101 d1qcza_ c.23.8.1 (A:) N5-CAIR 25.1 77 0.0056 19.9 5.8 46 25-70 16-63 (163)
102 d1c4oa1 c.37.1.19 (A:2-409) Nu 24.4 59 0.0043 23.0 5.1 60 15-75 5-65 (408)
103 d1sg1x2 g.24.1.1 (X:57-95) Low 24.3 14 0.00099 18.4 1.0 17 36-52 6-22 (39)
104 d1ltqa1 c.108.1.9 (A:153-301) 24.3 29 0.0021 19.8 2.8 21 51-72 41-61 (149)
105 d1zesa1 c.23.1.1 (A:3-123) Pho 24.3 59 0.0043 18.3 6.3 50 26-75 13-86 (121)
106 d2awna2 c.37.1.12 (A:4-235) Ma 24.2 27 0.002 23.1 2.9 40 47-86 165-205 (232)
107 d1p6qa_ c.23.1.1 (A:) CheY pro 22.9 66 0.0048 18.3 4.6 15 25-39 18-32 (129)
108 d2o8ia1 a.288.1.1 (A:1-165) Hy 22.9 44 0.0032 20.7 3.7 37 24-60 98-136 (165)
109 d1vr3a1 b.82.1.6 (A:1-179) Aci 22.7 47 0.0034 21.4 3.9 47 32-78 30-81 (179)
110 d1bwda_ d.126.1.2 (A:) L-argin 22.7 35 0.0026 22.3 3.3 28 21-48 60-87 (348)
111 d1okkd2 c.37.1.10 (D:97-303) G 22.6 75 0.0054 20.3 5.0 44 26-69 50-94 (207)
112 d1ojxa_ c.1.10.1 (A:) Archaeal 22.3 79 0.0057 20.5 5.1 47 21-67 120-174 (251)
113 d1eo1a_ c.55.5.1 (A:) Hypothet 21.8 49 0.0035 18.9 3.6 27 30-56 79-105 (124)
114 d1jr2a_ c.113.1.1 (A:) Uroporp 21.6 59 0.0043 20.5 4.3 45 29-74 103-147 (260)
115 d1o13a_ c.55.5.1 (A:) Hypothet 21.3 64 0.0046 17.7 4.0 27 29-55 77-103 (107)
116 d1owla2 c.28.1.1 (A:3-204) DNA 21.3 88 0.0064 19.2 5.8 50 22-75 53-102 (202)
117 d1v43a3 c.37.1.12 (A:7-245) Hy 21.0 25 0.0018 23.4 2.2 40 47-86 171-211 (239)
118 d1qkka_ c.23.1.1 (A:) Transcri 20.9 76 0.0056 18.3 5.7 31 43-75 54-84 (140)
119 d1ka9h_ c.23.16.1 (H:) GAT sub 20.8 46 0.0033 19.7 3.4 24 52-75 13-36 (195)
120 d1jida_ d.201.1.1 (A:) SRP19 { 20.8 54 0.0039 19.4 3.6 39 5-43 12-59 (114)
121 d1o2da_ e.22.1.2 (A:) Alcohol 20.5 68 0.0049 21.7 4.6 44 25-68 45-91 (359)
122 d2ihta3 c.36.1.9 (A:375-572) C 20.5 94 0.0069 19.2 5.7 45 29-75 145-189 (198)
123 d2b8ta1 c.37.1.24 (A:11-149) T 20.4 41 0.003 20.2 3.0 38 38-75 80-118 (139)
124 d1uqwa_ c.94.1.1 (A:) Hypothet 20.3 80 0.0058 21.1 4.9 49 26-74 306-361 (487)
125 d1jqga2 d.58.3.1 (A:4P-100P) P 20.3 25 0.0019 19.5 1.9 37 5-43 1-37 (92)
126 d1to3a_ c.1.10.1 (A:) Putative 20.1 1.1E+02 0.0081 20.1 5.6 46 23-68 139-193 (291)
No 1
>d1cmwa2 c.120.1.2 (A:10-173) 5' to 3' exonuclease domain of DNA polymerase Taq {Thermus aquaticus [TaxId: 271]}
Probab=100.00 E-value=5.2e-35 Score=202.77 Aligned_cols=89 Identities=34% Similarity=0.655 Sum_probs=85.8
Q ss_pred CccccccChhhhcCCCCCChhhHHhHHHHHHHHHHCCCcEEecCCcchhHHHHHHHHHhhhCCCcEEEEcCCCCc-cccc
Q 034415 1 MNFRHTLYPSYKNNRPPTPDTMVQGLQYLKASIKAMSIKVIEVPGVEADDVIGKLAVRSVDDGFKIQVVSPNKDS-QILS 79 (95)
Q Consensus 1 ~~~R~~l~p~YKanR~~~p~~l~~q~~~i~~~l~~~gi~~~~~~g~EADDvIatla~~~~~~~~~v~IvS~DkDl-QLv~ 79 (95)
++||+++||+||+||.++|+++..|++.+++++..+|++++..+|+||||+|||+|+++...+.+|+|+|+|||| |||+
T Consensus 62 ~~~R~~l~p~YK~~R~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~EADDvIa~la~~~~~~~~~v~IvS~DkD~~QLv~ 141 (164)
T d1cmwa2 62 PSFRHEAYGGYKAGRAPTPEDFPRQLALIKELVDLLGLARLEVPGYEADDVLASLAKKAEKEGYEVRILTADKDLYQLLS 141 (164)
T ss_dssp SCTTGGGGSTTTSCCCCCCSSHHHHHHHHHHHHHHTTCEEECCTTSCHHHHHHHHHHHHHHTTEEEEEECSSGGGGGSCC
T ss_pred ccchhhhhhhhhhccccCchhHHHHHHHHHHHHhhcCceEEEecCcchHHHHHHHHHHhccccceEEEecCCCChHHhee
Confidence 489999999999999999999999999999999999999999999999999999999999888999999999999 9999
Q ss_pred CCeEEEEecc
Q 034415 80 HSLCLLRIAP 89 (95)
Q Consensus 80 ~~v~v~~~~k 89 (95)
++|+||+|.+
T Consensus 142 ~~v~i~~~~~ 151 (164)
T d1cmwa2 142 DRIHVLHPEG 151 (164)
T ss_dssp SSCEEECSSS
T ss_pred CCEEEEeCCC
Confidence 9999999854
No 2
>d1tfra2 c.120.1.2 (A:12-180) T4 RNase H {Bacteriophage T4 [TaxId: 10665]}
Probab=99.97 E-value=2.6e-32 Score=191.32 Aligned_cols=90 Identities=21% Similarity=0.235 Sum_probs=72.6
Q ss_pred ccccccChhhhcCCCCCChhhHHhH--------HHHHHHHHHCCCcEEecCCcchhHHHHHHHHHhhhCCCcEEEEcCCC
Q 034415 2 NFRHTLYPSYKNNRPPTPDTMVQGL--------QYLKASIKAMSIKVIEVPGVEADDVIGKLAVRSVDDGFKIQVVSPNK 73 (95)
Q Consensus 2 ~~R~~l~p~YKanR~~~p~~l~~q~--------~~i~~~l~~~gi~~~~~~g~EADDvIatla~~~~~~~~~v~IvS~Dk 73 (95)
.||+++||+||+||+++|+++..|+ +.+.++++.+|++++..+|+||||+||++|+++...|.+|+|+|+||
T Consensus 66 ~~R~~l~p~YKanR~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~EADDvIa~la~~~~~~~~~vvIvS~Dk 145 (169)
T d1tfra2 66 YWRRDFAYYYKKNRGKAREESTWDWEGYFESSHKVIDELKAYMPYIVMDIDKYEADDHIAVLVKKFSLEGHKILIISSDG 145 (169)
T ss_dssp CGGGGTCTTTTC---------CCCHHHHHHHHHHHHHHHHHHSSSEEECCTTCCHHHHHHHHHHHHHHTTCCEEEECCCG
T ss_pred chhhhhHHHHhhCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhhhccccCCcccccHHHHHHHHHHHCCCcEEEEeCCC
Confidence 5899999999999999998866554 44566777899999999999999999999999988899999999999
Q ss_pred Cc-cccc-CCeEEEEeccCC
Q 034415 74 DS-QILS-HSLCLLRIAPRG 91 (95)
Q Consensus 74 Dl-QLv~-~~v~v~~~~k~~ 91 (95)
|| ||++ ++|++|+|.+|.
T Consensus 146 D~~QLv~~~~V~~~~p~~Kk 165 (169)
T d1tfra2 146 DFTQLHKYPNVKQWSPMHKK 165 (169)
T ss_dssp GGGGGTTSTTEEEEETTTTE
T ss_pred CHHHhCcCCCeEEeeCCCce
Confidence 99 9998 899999997664
No 3
>d1xo1a2 c.120.1.2 (A:19-185) T5 5'-exonuclease {Bacteriophage T5 [TaxId: 10726]}
Probab=99.97 E-value=2.1e-31 Score=185.45 Aligned_cols=90 Identities=21% Similarity=0.276 Sum_probs=67.7
Q ss_pred CccccccChhhhcCCCCCChhhHH--------hHHHHHHHH--HHCCCcEEecCCcchhHHHHHHHHHhhhCCCcEEEEc
Q 034415 1 MNFRHTLYPSYKNNRPPTPDTMVQ--------GLQYLKASI--KAMSIKVIEVPGVEADDVIGKLAVRSVDDGFKIQVVS 70 (95)
Q Consensus 1 ~~~R~~l~p~YKanR~~~p~~l~~--------q~~~i~~~l--~~~gi~~~~~~g~EADDvIatla~~~~~~~~~v~IvS 70 (95)
.+||+++||+||+||++.|+++.. ++..+.+++ ..+|++++..+|+||||+||++++++...+.+|+|+|
T Consensus 54 ~~~R~~l~p~YKanR~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~EADDiIa~l~~~~~~~~~~v~IvS 133 (167)
T d1xo1a2 54 SVFRLEHLPEYAGNRDEKYAQRTEEEKALDEQFFEYLKDAFELCKTTFPTFTIRGVEADDMAAYIVKLIGHLYDHVWLIS 133 (167)
T ss_dssp CHHHHTTCTTCC--------------------CHHHHHHHHHHHHTTSCEECCTTBCHHHHHHHHHHHHGGGSSCEEEEC
T ss_pred CCcccccchhhhhcCCCCchhcccchhHHHHHHHHHHHHHHHHhhccccEEEeccccchhHHHHHHHHhhcCCCEEEEEe
Confidence 379999999999999887765432 233344333 3479999999999999999999999988899999999
Q ss_pred CCCCc-ccccCCeEEEEeccC
Q 034415 71 PNKDS-QILSHSLCLLRIAPR 90 (95)
Q Consensus 71 ~DkDl-QLv~~~v~v~~~~k~ 90 (95)
+|||| |||+++|++|+|.++
T Consensus 134 ~DkD~~QLv~~~v~~~~~~~k 154 (167)
T d1xo1a2 134 TDGDWDTLLTDKVSRFSFTTR 154 (167)
T ss_dssp SCGGGGGGCBTTEEEECTTTC
T ss_pred CCccHHHheeCCEEEEeCCCC
Confidence 99999 999999999998765
No 4
>d1b43a2 c.120.1.2 (A:1-219) Flap endonuclease-1 (Fen-1 nuclease) {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=96.59 E-value=0.001 Score=45.74 Aligned_cols=46 Identities=20% Similarity=0.276 Sum_probs=37.3
Q ss_pred hHHHHHHHHHHCCCcEEecCCcchhHHHHHHHHHhhhCCCcEEEEcCCCCc
Q 034415 25 GLQYLKASIKAMSIKVIEVPGVEADDVIGKLAVRSVDDGFKIQVVSPNKDS 75 (95)
Q Consensus 25 q~~~i~~~l~~~gi~~~~~~g~EADDvIatla~~~~~~~~~v~IvS~DkDl 75 (95)
.+..++++|+.+|++++..| +|||-.+|.|++.-. ==.|+|.|.|+
T Consensus 130 ~~~~~~~lL~~~gv~~i~Ap-~EAdaqcA~L~~~g~----vd~v~SeDsD~ 175 (219)
T d1b43a2 130 LIEDAKKLLELMGIPIVQAP-SEGEAQAAYMAAKGS----VYASASQDYDS 175 (219)
T ss_dssp HHHHHHHHHHHHTCCEEECS-SCHHHHHHHHHHHTS----SSEEECSSSHH
T ss_pred HHHHHHHHHHHcCCceeeCc-hHHHHHHHHHHhcCC----eEEEEecccce
Confidence 36678999999999999998 599999998876422 22578999998
No 5
>d1a77a2 c.120.1.2 (A:2-208) Flap endonuclease-1 (Fen-1 nuclease) {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=96.27 E-value=0.0024 Score=43.47 Aligned_cols=51 Identities=22% Similarity=0.190 Sum_probs=39.4
Q ss_pred hHHHHHHHHHHCCCcEEecCCcchhHHHHHHHHHhhhCCCcEEEEcCCCCc-ccccC
Q 034415 25 GLQYLKASIKAMSIKVIEVPGVEADDVIGKLAVRSVDDGFKIQVVSPNKDS-QILSH 80 (95)
Q Consensus 25 q~~~i~~~l~~~gi~~~~~~g~EADDvIatla~~~~~~~~~v~IvS~DkDl-QLv~~ 80 (95)
.+..++++|..+|++++..| +|||=.+|.|++.-. .. .|+|.|.|+ -.-.+
T Consensus 130 ~~~~~~~ll~~~gi~yi~Ap-~EAeaqcA~L~~~g~---vd-~v~seDsD~l~yG~~ 181 (207)
T d1a77a2 130 MVENCKYLLSLMGIPYVEAP-SEGEAQASYMAKKGD---VW-AVVSQDYDALLYGAP 181 (207)
T ss_dssp HHHHHHHHHHHHTCCEEECS-SCHHHHHHHHHHHTS---SS-EEECSSSGGGGGTCS
T ss_pred HHHHHHHHHHHcCCceEecC-ccHHHHHHHHHHcCC---eE-EEEecccceeccCCC
Confidence 46778999999999999998 899999998876322 13 367999998 54333
No 6
>d1ul1x2 c.120.1.2 (X:2-217) Flap endonuclease-1 (Fen-1 nuclease) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.16 E-value=0.0033 Score=42.50 Aligned_cols=52 Identities=21% Similarity=0.211 Sum_probs=38.2
Q ss_pred HHHHHHHHHHCCCcEEecCCcchhHHHHHHHHHhhhCCCcEEEEcCCCCc-ccccCCe
Q 034415 26 LQYLKASIKAMSIKVIEVPGVEADDVIGKLAVRSVDDGFKIQVVSPNKDS-QILSHSL 82 (95)
Q Consensus 26 ~~~i~~~l~~~gi~~~~~~g~EADDvIatla~~~~~~~~~v~IvS~DkDl-QLv~~~v 82 (95)
+..++++|+.+|++++..|+ |||=.+|.|++. |.==.|+|.|.|+ -.-.+.|
T Consensus 137 ~~~~~~ll~~~gv~~i~Ap~-EAdaq~A~L~~~----g~vd~v~S~DsD~l~fG~~~v 189 (216)
T d1ul1x2 137 NDECKHLLSLMGIPYLDAPS-EAEASCAALVKA----GKVYAAATEDMDCLTFGSPVL 189 (216)
T ss_dssp HHHHHHHHHHHTCCEEECSS-CHHHHHHHHHHH----TSSSEEECSCTHHHHTTCSEE
T ss_pred HHHHHHHHHhcCeeeEeccc-hHHHHHHHHHhc----CceEEEEccccceeccCCcEE
Confidence 45688999999999999876 999888777652 2211578999999 5433433
No 7
>d1rxwa2 c.120.1.2 (A:3-219) Flap endonuclease-1 (Fen-1 nuclease) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=95.61 E-value=0.0096 Score=40.52 Aligned_cols=50 Identities=22% Similarity=0.209 Sum_probs=38.8
Q ss_pred HHHHHHHHHHCCCcEEecCCcchhHHHHHHHHHhhhCCCcEEEEcCCCCc-ccccC
Q 034415 26 LQYLKASIKAMSIKVIEVPGVEADDVIGKLAVRSVDDGFKIQVVSPNKDS-QILSH 80 (95)
Q Consensus 26 ~~~i~~~l~~~gi~~~~~~g~EADDvIatla~~~~~~~~~v~IvS~DkDl-QLv~~ 80 (95)
+..++++|+.+|++++..| +|||-..|.|++. |.==.|+|.|.|+ -.-.+
T Consensus 129 ~~~~~~lL~~~gi~~i~Ap-~EAeaqcA~L~~~----g~vd~v~seDsD~l~fG~~ 179 (217)
T d1rxwa2 129 VDSAKTLLSYMGIPFVDAP-SEGEAQAAYMAAK----GDVEYTGSQDYDSLLFGSP 179 (217)
T ss_dssp HHHHHHHHHHTTCCEEECS-SCHHHHHHHHHHT----TSSSEEECSSSHHHHTTCS
T ss_pred HHHHHHHHHHcCceEEecC-chHHHHHHHHHhC----CCeEEEEecccceeeeCCC
Confidence 5678899999999999986 6999999988762 3322478999998 55333
No 8
>d1j2ra_ c.33.1.3 (A:) Hypothetical protein YecD {Escherichia coli [TaxId: 562]}
Probab=91.66 E-value=0.11 Score=33.63 Aligned_cols=43 Identities=16% Similarity=0.265 Sum_probs=39.6
Q ss_pred HHHHHHHHCCCcEEecCCcchhHHHHHHHHHhhhCCCcEEEEc
Q 034415 28 YLKASIKAMSIKVIEVPGVEADDVIGKLAVRSVDDGFKIQVVS 70 (95)
Q Consensus 28 ~i~~~l~~~gi~~~~~~g~EADDvIatla~~~~~~~~~v~IvS 70 (95)
.+.++|...|+..+.+-|.++|=++-+-+..+.+.|++|++++
T Consensus 111 ~L~~~L~~~gi~~liv~Gv~t~~CV~~Ta~~A~~~G~~v~vv~ 153 (188)
T d1j2ra_ 111 DLELQLRRRGIDTIVLCGISTNIGVESTARNAWELGFNLVIAE 153 (188)
T ss_dssp SHHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEE
T ss_pred cHHHHHHhcCCceEEEEEeccCchHHHHHHHHHHCCCeEEEeC
Confidence 4778889999999999999999999999999999999999975
No 9
>d1im5a_ c.33.1.3 (A:) Pyrazinamidase/nicotinamidase {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=91.48 E-value=0.12 Score=32.98 Aligned_cols=43 Identities=16% Similarity=0.356 Sum_probs=39.1
Q ss_pred HHHHHHHHCCCcEEecCCcchhHHHHHHHHHhhhCCCcEEEEc
Q 034415 28 YLKASIKAMSIKVIEVPGVEADDVIGKLAVRSVDDGFKIQVVS 70 (95)
Q Consensus 28 ~i~~~l~~~gi~~~~~~g~EADDvIatla~~~~~~~~~v~IvS 70 (95)
.+..+|...|+..+.+-|.++|=++-+-+..+...|++|+|++
T Consensus 109 ~L~~~Lr~~gi~~liv~G~~t~~CV~~T~~~a~~~g~~V~vv~ 151 (179)
T d1im5a_ 109 DLAKILRGNGVKRVYICGVATEYCVRATALDALKHGFEVYLLR 151 (179)
T ss_dssp SHHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHCCCCEEEEEEeccchhHHHHHHHHHHcCCEEEEec
Confidence 4667788999999999999999999999999999999999976
No 10
>d1nf9a_ c.33.1.3 (A:) Phenazine biosynthesis protein PhzD {Pseudomonas aeruginosa [TaxId: 287]}
Probab=89.39 E-value=0.22 Score=32.99 Aligned_cols=42 Identities=17% Similarity=0.109 Sum_probs=38.7
Q ss_pred HHHHHHHCCCcEEecCCcchhHHHHHHHHHhhhCCCcEEEEc
Q 034415 29 LKASIKAMSIKVIEVPGVEADDVIGKLAVRSVDDGFKIQVVS 70 (95)
Q Consensus 29 i~~~l~~~gi~~~~~~g~EADDvIatla~~~~~~~~~v~IvS 70 (95)
+.++|+..|+..+.+-|...|=++.+-+..+...|++|+|++
T Consensus 133 L~~~L~~~gi~~lvv~Gv~T~~CV~~Ta~~A~~~gy~v~Vv~ 174 (207)
T d1nf9a_ 133 LLQRMRAAGRDQLVLCGVYAHVGVLISTVDAYSNDIQPFLVA 174 (207)
T ss_dssp HHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHcCCceeEEecccccccHHHHHHHHHHCCCEEEEEc
Confidence 777888999999999999999999988988999999999976
No 11
>d1yaca_ c.33.1.3 (A:) YcaC {Escherichia coli [TaxId: 562]}
Probab=88.73 E-value=0.14 Score=34.08 Aligned_cols=44 Identities=23% Similarity=0.414 Sum_probs=40.4
Q ss_pred HHHHHHHHHCCCcEEecCCcchhHHHHHHHHHhhhCCCcEEEEc
Q 034415 27 QYLKASIKAMSIKVIEVPGVEADDVIGKLAVRSVDDGFKIQVVS 70 (95)
Q Consensus 27 ~~i~~~l~~~gi~~~~~~g~EADDvIatla~~~~~~~~~v~IvS 70 (95)
..+.++|+..|+..+..-|.+.|=++.+-|..+.+.|++|+|++
T Consensus 93 t~L~~~L~~~gi~~lil~G~~T~~CV~~Ta~dA~~~Gy~V~vv~ 136 (204)
T d1yaca_ 93 EDFVKAVKATGKKQLIIAGVVTEVCVAFPALSAIEEGFDVFVVT 136 (204)
T ss_dssp HHHHHHHHHTTCSEEEEEEBSCCCCCHHHHHHHHHTTCEEEEET
T ss_pred hhHHHHHHhcCCCEEEEEEeecccHHHHHHHHHHHcCCEEEEeC
Confidence 34778899999999999999999999999999999999999986
No 12
>d1o4wa_ c.120.1.1 (A:) Hypothetical protein AF0591 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=86.22 E-value=0.13 Score=31.84 Aligned_cols=47 Identities=13% Similarity=0.156 Sum_probs=34.7
Q ss_pred CCcEEecCCcchhHHHHHHHHHhhhCCCcEEEEcCCCCc--ccccCCeEEEEecc
Q 034415 37 SIKVIEVPGVEADDVIGKLAVRSVDDGFKIQVVSPNKDS--QILSHSLCLLRIAP 89 (95)
Q Consensus 37 gi~~~~~~g~EADDvIatla~~~~~~~~~v~IvS~DkDl--QLv~~~v~v~~~~k 89 (95)
.++.+..+ -.|||.|=.+|... +++++|.|+.| ++..++|.|+.+..
T Consensus 68 ~~~~~~~~-~~~Dd~il~~a~~~-----~~iv~T~D~~Lr~~~~~~GVpvi~l~~ 116 (125)
T d1o4wa_ 68 HFEVVETE-SEGDPSLIEAAEKY-----GCILITNDKELKRKAKQRGIPVGYLKE 116 (125)
T ss_dssp TSEEECCS-SCSHHHHHHHHHHH-----TCEEECCCHHHHHHHHHTTCCEECCCC
T ss_pred hCCCCCCC-CcHHHHHHHHHhhC-----CeEEEecCHHHHHHHHHcCCcEEEEeC
Confidence 45555544 46999887776543 57899999999 67779999988754
No 13
>d1nbaa_ c.33.1.3 (A:) N-carbamoylsarcosine amidohydrolase {Arthrobacter sp. [TaxId: 1667]}
Probab=82.38 E-value=0.59 Score=32.10 Aligned_cols=43 Identities=16% Similarity=0.272 Sum_probs=39.1
Q ss_pred HHHHHHHHCCCcEEecCCcchhHHHHHHHHHhhhCCCcEEEEc
Q 034415 28 YLKASIKAMSIKVIEVPGVEADDVIGKLAVRSVDDGFKIQVVS 70 (95)
Q Consensus 28 ~i~~~l~~~gi~~~~~~g~EADDvIatla~~~~~~~~~v~IvS 70 (95)
.+..+|...|+..+.+-|...|=++-+-+..+...|++|+|++
T Consensus 148 ~L~~~Lr~~gI~~liv~Gv~Td~CV~~Ta~dA~~~Gy~V~Vv~ 190 (253)
T d1nbaa_ 148 NLELFLTSNRIDTLIVTGATAAGCVRHTVEDAIAKGFRPIIPR 190 (253)
T ss_dssp SHHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHHTCEEEEEG
T ss_pred cHHHHHhhhccceEEEEeecccchHHHHHHHHHHCCCEEEEec
Confidence 3677899999999999999999999999988888999999976
No 14
>d7reqb2 c.23.6.1 (B:476-638) Methylmalonyl-CoA mutase beta subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]}
Probab=71.04 E-value=1.1 Score=28.93 Aligned_cols=53 Identities=13% Similarity=0.055 Sum_probs=38.3
Q ss_pred hHHhHHHHHHHHHHCCCcEEecCCcchhHHHHHHHHHhhhCCC-cEEEEcCCCCc-ccc
Q 034415 22 MVQGLQYLKASIKAMSIKVIEVPGVEADDVIGKLAVRSVDDGF-KIQVVSPNKDS-QIL 78 (95)
Q Consensus 22 l~~q~~~i~~~l~~~gi~~~~~~g~EADDvIatla~~~~~~~~-~v~IvS~DkDl-QLv 78 (95)
....-.++..+|...||.++..+++-..+++.. +.+.+. -|+|+|+|++. .++
T Consensus 49 h~ara~f~~n~f~~gGfev~~~~~~~~~e~v~a----a~~~~a~vvvicssd~~y~~~~ 103 (163)
T d7reqb2 49 FGGREGFSSPVWHIAGIDTPQVEGGTTAEIVEA----FKKSGAQVADLCSSAKVYAQQG 103 (163)
T ss_dssp HHHHHHHHHHHHHHTTCBCCEEESCCHHHHHHH----HHHHTCSEEEEECCHHHHHHHH
T ss_pred hhhHHHHHHHHHHccCeeeccCCCCCcHHHHHH----HHhCCCCEEEEecCccchHHHH
Confidence 455567799999999999998888876665543 233333 47789999987 554
No 15
>d1mkza_ c.57.1.1 (A:) MoaB {Escherichia coli [TaxId: 562]}
Probab=69.77 E-value=6.1 Score=24.91 Aligned_cols=49 Identities=12% Similarity=0.263 Sum_probs=33.8
Q ss_pred HHHHHHHHHCCCcEEec--CCcchhHHHHHHHHHhhhCCCcEEEEc-----CCCCc
Q 034415 27 QYLKASIKAMSIKVIEV--PGVEADDVIGKLAVRSVDDGFKIQVVS-----PNKDS 75 (95)
Q Consensus 27 ~~i~~~l~~~gi~~~~~--~g~EADDvIatla~~~~~~~~~v~IvS-----~DkDl 75 (95)
+.+.+++++.|+.++.. -.-+.+.+..++.......+..++|.| +++|+
T Consensus 29 p~L~~~l~~~G~~v~~~~iv~Dd~~~~~~~l~~~~~~~~~dlIiTtGGtg~g~~D~ 84 (170)
T d1mkza_ 29 HYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLTEGDQ 84 (170)
T ss_dssp HHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCSSSTTCC
T ss_pred HHHHHHHHHCCCEEEEeeeeCCCHHHHHHHHHhhhhcccceEEEEeeeeccccccc
Confidence 56888999999887543 244455666666665666677888875 47777
No 16
>d1v96a1 c.120.1.1 (A:2-149) Hypothetical protein PH0500 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=68.50 E-value=0.8 Score=28.91 Aligned_cols=36 Identities=14% Similarity=0.175 Sum_probs=25.3
Q ss_pred chhHHHHHHHHHhhhCCCcEEEEcCC-CCccccc-CCeEEEEe
Q 034415 47 EADDVIGKLAVRSVDDGFKIQVVSPN-KDSQILS-HSLCLLRI 87 (95)
Q Consensus 47 EADDvIatla~~~~~~~~~v~IvS~D-kDlQLv~-~~v~v~~~ 87 (95)
-+|-+||+.|... +..++|.| |||+.+. -++.+..+
T Consensus 95 ~~D~lIAAtAi~~-----~~~LVT~n~kdF~~i~~~Gl~vi~~ 132 (148)
T d1v96a1 95 MEDIITATTAIYT-----NSLLVTDDPKRYEPIRRFGLDTMPL 132 (148)
T ss_dssp HHHHHHHHHHHHH-----TCEEEESCHHHHGGGGGGTCCEEEH
T ss_pred hhHHHHHHHHHHc-----CCEEEeCCHHHhhHHHHCCceEecH
Confidence 4799999777543 34799999 7885554 37777765
No 17
>d1x9ga_ c.33.1.3 (A:) Ribonuclease MAR1 {Leishmania donovani [TaxId: 5661]}
Probab=62.71 E-value=2.9 Score=26.67 Aligned_cols=35 Identities=14% Similarity=0.118 Sum_probs=32.6
Q ss_pred CCCcEEecCCcchhHHHHHHHHHhhhCCCcEEEEc
Q 034415 36 MSIKVIEVPGVEADDVIGKLAVRSVDDGFKIQVVS 70 (95)
Q Consensus 36 ~gi~~~~~~g~EADDvIatla~~~~~~~~~v~IvS 70 (95)
.|+..+.+-|+++|=++.+-|..+.+.|++|+|++
T Consensus 97 ~gi~~lii~G~~T~~CV~~Ta~~a~~~Gy~v~vv~ 131 (192)
T d1x9ga_ 97 EDVDNAVVFGIEGHACILQTVADLLDMNKRVFLPK 131 (192)
T ss_dssp TTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEG
T ss_pred CCCCEEEEEecccCcHHHHHHHHHHHCCCEEEEeC
Confidence 59999999999999999999999999999999976
No 18
>d1nw9b_ c.17.1.1 (B:) Caspase-9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=62.09 E-value=8.1 Score=25.32 Aligned_cols=35 Identities=11% Similarity=0.067 Sum_probs=29.8
Q ss_pred HHHHHHHHHHCCCcEEecCCcchhHHHHHHHHHhh
Q 034415 26 LQYLKASIKAMSIKVIEVPGVEADDVIGKLAVRSV 60 (95)
Q Consensus 26 ~~~i~~~l~~~gi~~~~~~g~EADDvIatla~~~~ 60 (95)
-..++++|+.+|+.+....+..+.++..++.....
T Consensus 48 a~~l~~~l~~lGF~V~~~~nlt~~~~~~~l~~~~~ 82 (277)
T d1nw9b_ 48 CEKLRRRFSSLHFMVEVKGDLTAKKMVLALLELAR 82 (277)
T ss_dssp HHHHHHHHHHTTEEEEEEESCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEeeCCCHHHHHHHHHHhhh
Confidence 45688899999999999999999999998876543
No 19
>d1uuya_ c.57.1.1 (A:) Plant CNX1 G domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=61.36 E-value=10 Score=23.68 Aligned_cols=48 Identities=15% Similarity=0.115 Sum_probs=32.8
Q ss_pred HHHHHHHHC-----CCcEEecC--CcchhHHHHHHHHHhhhCCCcEEEEcC-----CCCc
Q 034415 28 YLKASIKAM-----SIKVIEVP--GVEADDVIGKLAVRSVDDGFKIQVVSP-----NKDS 75 (95)
Q Consensus 28 ~i~~~l~~~-----gi~~~~~~--g~EADDvIatla~~~~~~~~~v~IvS~-----DkDl 75 (95)
.+.+++.+. |+.++... .-+.|.+..++.+.....++.++|.|+ ++|+
T Consensus 27 ~l~~~l~~~~~~~~G~~v~~~~ivpDd~~~I~~~l~~~~~~~~~D~IittGGtg~g~~D~ 86 (161)
T d1uuya_ 27 RAVSVVDSSSEKLGGAKVVATAVVPDEVERIKDILQKWSDVDEMDLILTLGGTGFTPRDV 86 (161)
T ss_dssp HHHHHHHHTTTTTTSEEEEEEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSSTTCC
T ss_pred HHHHHHHhhccccCCcEEEEEEEECCCHHHHHHHHHHhhhcCCceEEEEecCCCCCcccC
Confidence 355566554 77766543 456778888887755556789999884 6665
No 20
>d2h1ca1 c.120.1.1 (A:1-138) Trafficking protein B {Neisseria gonorrhoeae [TaxId: 485]}
Probab=61.22 E-value=1.5 Score=26.03 Aligned_cols=33 Identities=15% Similarity=0.168 Sum_probs=21.2
Q ss_pred hhHHHHHHHHHhhhCCCcEEEEcCC-CCc-ccccCCeEEEEec
Q 034415 48 ADDVIGKLAVRSVDDGFKIQVVSPN-KDS-QILSHSLCLLRIA 88 (95)
Q Consensus 48 ADDvIatla~~~~~~~~~v~IvS~D-kDl-QLv~~~v~v~~~~ 88 (95)
+|=+||..|... ...++|.| ||| .+ .+.+++|.
T Consensus 103 ~D~~IaA~Ai~~-----~~~LvT~N~kdF~~~---g~~~~~pw 137 (138)
T d2h1ca1 103 ADGYIAATAKQH-----SLTVATRDTGSFFAA---DVAVFNPW 137 (138)
T ss_dssp HHHHHHHHHHHH-----TCEEECSCCHHHHHT---TCCEECTT
T ss_pred HHHHHHHHHHHc-----CCEEEECCHHHhccC---CCceeCCC
Confidence 455666544322 33689989 899 76 47777764
No 21
>d1y5ea1 c.57.1.1 (A:12-166) MoaB {Bacillus cereus [TaxId: 1396]}
Probab=60.32 E-value=9.4 Score=23.36 Aligned_cols=50 Identities=12% Similarity=0.126 Sum_probs=34.8
Q ss_pred HHHHHHHHHHCCCcEEec--CCcchhHHHHHHHHHhhhCCCcEEEEcC-----CCCc
Q 034415 26 LQYLKASIKAMSIKVIEV--PGVEADDVIGKLAVRSVDDGFKIQVVSP-----NKDS 75 (95)
Q Consensus 26 ~~~i~~~l~~~gi~~~~~--~g~EADDvIatla~~~~~~~~~v~IvS~-----DkDl 75 (95)
=+.+.++|++.|+.+... -.=+.|.+...+.......+..++|.|+ ++|+
T Consensus 22 gp~L~~~l~~~G~~v~~~~iv~D~~~~i~~~l~~~~~~~~~DlIvTtGGts~g~~D~ 78 (155)
T d1y5ea1 22 GQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGITKRDV 78 (155)
T ss_dssp HHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSSTTCC
T ss_pred HHHHHHHHHhcCCEEEEeeeecchHHHHHHHHHHHHhccCCCEEEEeeeeecccccc
Confidence 456888899999887653 3556777777777654445678888764 5665
No 22
>g1nme.1 c.17.1.1 (A:,B:) Apopain (caspase-3, cpp32) {Human (Homo sapiens) [TaxId: 9606]}
Probab=59.25 E-value=7.9 Score=25.32 Aligned_cols=36 Identities=8% Similarity=0.181 Sum_probs=31.1
Q ss_pred hHHHHHHHHHHCCCcEEecCCcchhHHHHHHHHHhh
Q 034415 25 GLQYLKASIKAMSIKVIEVPGVEADDVIGKLAVRSV 60 (95)
Q Consensus 25 q~~~i~~~l~~~gi~~~~~~g~EADDvIatla~~~~ 60 (95)
--..+.++|+.+|+.+....+.-++++..++.....
T Consensus 42 Da~~l~~~l~~lGF~V~~~~nlt~~~~~~~l~~~~~ 77 (238)
T g1nme.1 42 DAANLRETFRNLKYEVRNKNDLTREEIVELMRDVSK 77 (238)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhh
Confidence 356688999999999999999999999999876544
No 23
>d1di6a_ c.57.1.1 (A:) MogA {Escherichia coli [TaxId: 562]}
Probab=59.03 E-value=6.3 Score=25.91 Aligned_cols=46 Identities=9% Similarity=-0.024 Sum_probs=32.8
Q ss_pred HHHHHHHHHCCCcEEe----cCCcchhHHHHHHHHHhhhCCCcEEEEcCC
Q 034415 27 QYLKASIKAMSIKVIE----VPGVEADDVIGKLAVRSVDDGFKIQVVSPN 72 (95)
Q Consensus 27 ~~i~~~l~~~gi~~~~----~~g~EADDvIatla~~~~~~~~~v~IvS~D 72 (95)
+.+.+.|...|..+.. .-.-+.+.|..++.....+.+..++|.|+=
T Consensus 25 p~l~~~L~~~g~~~~~v~~~IVpDd~~~I~~~l~~~~~~~~~DlIlTTGG 74 (190)
T d1di6a_ 25 PALEEWLTSALTTPFELETRLIPDEQAIIEQTLCELVDEMSCHLVLTTGG 74 (190)
T ss_dssp HHHHHHHHHHBCSCEEEEEEEEESCHHHHHHHHHHHHHTSCCSEEEEESC
T ss_pred HHHHHHHHHcCCCceEEEEEEECCcHHHHHHHHHHHHhccCceEEEecCC
Confidence 5677788776655322 235577788888887777778999999864
No 24
>d1f1ja_ c.17.1.1 (A:) Caspase-7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=57.99 E-value=9.6 Score=24.83 Aligned_cols=36 Identities=14% Similarity=0.114 Sum_probs=30.9
Q ss_pred hHHHHHHHHHHCCCcEEecCCcchhHHHHHHHHHhh
Q 034415 25 GLQYLKASIKAMSIKVIEVPGVEADDVIGKLAVRSV 60 (95)
Q Consensus 25 q~~~i~~~l~~~gi~~~~~~g~EADDvIatla~~~~ 60 (95)
--..++++|+.+|+.+....+..++++..++.....
T Consensus 36 Da~~l~~~l~~lGF~V~~~~nl~~~em~~~l~~~~~ 71 (245)
T d1f1ja_ 36 DAEALFKCFRSLGFDVIVYNDCSCAKMQDLLKKASE 71 (245)
T ss_dssp HHHHHHHHHHHHTEEEEEEESCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHH
Confidence 356688899999999999999999999999886543
No 25
>d1dt9a2 d.79.3.2 (A:277-422) C-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=57.86 E-value=1.7 Score=27.57 Aligned_cols=33 Identities=15% Similarity=0.204 Sum_probs=28.0
Q ss_pred chhHHHHHHHHHhhhCCCcEEEEcCCCCc--cccc
Q 034415 47 EADDVIGKLAVRSVDDGFKIQVVSPNKDS--QILS 79 (95)
Q Consensus 47 EADDvIatla~~~~~~~~~v~IvS~DkDl--QLv~ 79 (95)
|--|+|--++..+.+.|.+|.|+|+|.+- ||++
T Consensus 94 ~~~~lie~l~e~a~~~g~~v~iiS~~~eeG~ql~~ 128 (146)
T d1dt9a2 94 ESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVK 128 (146)
T ss_dssp CCCBHHHHHHHTCTTTTSCEEEECSSSHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHcCCeEEEEcCCCHhHHHHHH
Confidence 44578888999888889999999999997 6764
No 26
>d2f7wa1 c.57.1.1 (A:2-174) MogA {Shewanella oneidensis [TaxId: 70863]}
Probab=57.63 E-value=6.7 Score=24.61 Aligned_cols=46 Identities=11% Similarity=-0.008 Sum_probs=33.1
Q ss_pred HHHHHHHHHHCCCcEE----ecCCcchhHHHHHHHHHhhhCCCcEEEEcC
Q 034415 26 LQYLKASIKAMSIKVI----EVPGVEADDVIGKLAVRSVDDGFKIQVVSP 71 (95)
Q Consensus 26 ~~~i~~~l~~~gi~~~----~~~g~EADDvIatla~~~~~~~~~v~IvS~ 71 (95)
-+++.+.|...|+.+. ..-.-+.+.+..++...+.+.++.++|.|+
T Consensus 24 gp~l~~~L~~~G~~~~~v~~~ivpDd~~~I~~~l~~~~~~~~~dlIittG 73 (173)
T d2f7wa1 24 GKAIIDTLNDYLTSEWEPIYQVIPDEQDVIETTLIKMADEQDCCLIVTTG 73 (173)
T ss_dssp HHHHHHHHHHHBCSCEEEEEEEECSCHHHHHHHHHHHHHTSCEEEEEEES
T ss_pred HHHHHHHHHHhCCCceEEEEEEcCCcHHHHHHHhhhhhhcccccEEEEec
Confidence 4678888988887632 345667888888887766666777777764
No 27
>d1g2ia_ c.23.16.2 (A:) Intracellular protease {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=57.60 E-value=5.1 Score=24.61 Aligned_cols=39 Identities=13% Similarity=0.203 Sum_probs=30.7
Q ss_pred CcEEecCCcchhHHHHHHHHHhhhCCCcEEEEcCCCCc-cc
Q 034415 38 IKVIEVPGVEADDVIGKLAVRSVDDGFKIQVVSPNKDS-QI 77 (95)
Q Consensus 38 i~~~~~~g~EADDvIatla~~~~~~~~~v~IvS~DkDl-QL 77 (95)
+.++..+|+|.-++.+-+- .+.+.|++|.++|.|+.. +.
T Consensus 3 v~il~~dgf~~~E~~~p~~-~l~~ag~~v~~vs~~~~~V~~ 42 (166)
T d1g2ia_ 3 VLFLTANEFEDVELIYPYH-RLKEEGHEVYIASFERGTITG 42 (166)
T ss_dssp EEEECCTTBCHHHHHHHHH-HHHHTTCEEEEEESSSEEEEC
T ss_pred EEEEeCCCcCHHHHHHHHH-HHHHCCCEEEEEeCCCceEee
Confidence 4567889999999888654 456789999999998876 43
No 28
>d1jlja_ c.57.1.1 (A:) Gephyrin N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=57.58 E-value=13 Score=22.83 Aligned_cols=47 Identities=9% Similarity=0.058 Sum_probs=32.5
Q ss_pred HHHHHHHHHH---CCCcEEecC--CcchhHHHHHHHHHhhhCCCcEEEEcCC
Q 034415 26 LQYLKASIKA---MSIKVIEVP--GVEADDVIGKLAVRSVDDGFKIQVVSPN 72 (95)
Q Consensus 26 ~~~i~~~l~~---~gi~~~~~~--g~EADDvIatla~~~~~~~~~v~IvS~D 72 (95)
-+++.++|.. +|+.+.... .-+-|.+..++...+...++.++|.|+-
T Consensus 24 g~~L~~~l~~~~~~G~~v~~~~iV~Dd~~~i~~al~~~~~~~~~D~ViTtGG 75 (169)
T d1jlja_ 24 GINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGG 75 (169)
T ss_dssp HHHHHHHHHCTTTTCCEEEEEEEECSCHHHHHHHHHHHHHTSCCSEEEEESC
T ss_pred HHHHHHHHHhhccCCcEEEEEEEeccchhhHHHHHHHHhhcccccEEEEecC
Confidence 4567778876 588776643 5555667777776666667899998753
No 29
>d1p80a1 c.23.16.3 (A:598-753) Catalase, C-terminal domain {Escherichia coli, HPII [TaxId: 562]}
Probab=55.39 E-value=5.5 Score=24.39 Aligned_cols=37 Identities=11% Similarity=0.216 Sum_probs=29.5
Q ss_pred CcEEecCCcchhHHHHHHHHHhhhCCCcEEEEcCCCCc
Q 034415 38 IKVIEVPGVEADDVIGKLAVRSVDDGFKIQVVSPNKDS 75 (95)
Q Consensus 38 i~~~~~~g~EADDvIatla~~~~~~~~~v~IvS~DkDl 75 (95)
+.++..+|+|+.|+.+.+.. +.+.|.++.++|.....
T Consensus 6 VaiLv~dg~~~~e~~~~~~~-l~~ag~~v~~v~~~~~~ 42 (156)
T d1p80a1 6 VAILLNDEVRSADLLAILKA-LKAKGVHAKLLYSRMGE 42 (156)
T ss_dssp EEEECCTTCCHHHHHHHHHH-HHHHTCEEEEEESSSSE
T ss_pred EEEEeCCCCCHHHHHHHHHH-HHHCCCEEEEEeccccc
Confidence 45678899999999887664 55678999999987664
No 30
>d1x52a1 d.79.3.2 (A:8-118) Cell division protein pelota {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.92 E-value=4.4 Score=24.42 Aligned_cols=29 Identities=14% Similarity=0.098 Sum_probs=23.7
Q ss_pred hHHHHHHHHHhhhCCCcEEEEcCCCCc--cc
Q 034415 49 DDVIGKLAVRSVDDGFKIQVVSPNKDS--QI 77 (95)
Q Consensus 49 DDvIatla~~~~~~~~~v~IvS~DkDl--QL 77 (95)
-+.+-.++..+.+.|.+|.|+|+|.+- ||
T Consensus 66 r~~i~~l~~~~~~~g~~v~iiS~~~e~G~qL 96 (111)
T d1x52a1 66 RSRYVRLVDSVKENAGTVRIFSSLHVSGEQL 96 (111)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECSSSHHHHHH
T ss_pred HHHHHHHHHHHHhcCCEEEEEcCCChhHHHH
Confidence 345666777788889999999999998 65
No 31
>d1r9ja2 c.36.1.10 (A:1-336) Transketolase (TK), PP module {Leishmania mexicana mexicana [TaxId: 44270]}
Probab=51.62 E-value=16 Score=25.60 Aligned_cols=43 Identities=23% Similarity=0.245 Sum_probs=26.2
Q ss_pred HHHHHHHHHCCCcEEecCC--cchhHHHHHHHHHhhhCCCcEEEE
Q 034415 27 QYLKASIKAMSIKVIEVPG--VEADDVIGKLAVRSVDDGFKIQVV 69 (95)
Q Consensus 27 ~~i~~~l~~~gi~~~~~~g--~EADDvIatla~~~~~~~~~v~Iv 69 (95)
..+..-++++|+.+++++| ...+.+.+.++......+.+++|+
T Consensus 199 ~d~~~rf~afGW~vi~Vdgg~~d~~~~~~~~~~a~~~~~kP~~Ii 243 (336)
T d1r9ja2 199 EQCHQKYVAMGFHVIEVKNGDTDYEGLRKALAEAKATKGKPKMIV 243 (336)
T ss_dssp CCHHHHHHHTTCEEEEESCTTTCHHHHHHHHHHHHHCCSSCEEEE
T ss_pred hHHHHHHHHhccceEEEecCchHHHHHHHHhhhhhhccCCCccce
Confidence 3456668899999999987 333444444443333445565554
No 32
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=51.49 E-value=6.7 Score=26.27 Aligned_cols=41 Identities=15% Similarity=0.302 Sum_probs=32.7
Q ss_pred CcchhHHHHHHHHHhhhCCCcEEEEcCCCCc-ccccCCeEEEE
Q 034415 45 GVEADDVIGKLAVRSVDDGFKIQVVSPNKDS-QILSHSLCLLR 86 (95)
Q Consensus 45 g~EADDvIatla~~~~~~~~~v~IvS~DkDl-QLv~~~v~v~~ 86 (95)
-..+++++..+.+...+.|..|+++|.|-+. + +.++|-++.
T Consensus 178 ~~~~~~i~~~l~~l~~~~g~tii~vTHd~~~a~-~~drv~~m~ 219 (230)
T d1l2ta_ 178 SKTGEKIMQLLKKLNEEDGKTVVVVTHDINVAR-FGERIIYLK 219 (230)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEECSCHHHHT-TSSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhhCCEEEEECCCHHHHH-hCCEEEEEE
Confidence 3478888888887667778899999999888 7 577777764
No 33
>d1dnpa2 c.28.1.1 (A:1-200) DNA photolyase {Escherichia coli [TaxId: 562]}
Probab=50.31 E-value=25 Score=22.11 Aligned_cols=54 Identities=6% Similarity=-0.024 Sum_probs=34.7
Q ss_pred hHHhHHHHHHHHHHCCCcEEecCCcchhHHHHHHHHHhhhCCCcEEEEcCCCCc
Q 034415 22 MVQGLQYLKASIKAMSIKVIEVPGVEADDVIGKLAVRSVDDGFKIQVVSPNKDS 75 (95)
Q Consensus 22 l~~q~~~i~~~l~~~gi~~~~~~g~EADDvIatla~~~~~~~~~v~IvS~DkDl 75 (95)
+.+.+..+++-|..+|+..+...|-..++....+...+.+.+...+.++.|-..
T Consensus 54 l~~sL~~L~~~L~~~g~~L~v~~g~~~~~~~~~l~~l~~~~~i~~v~~n~~~~~ 107 (200)
T d1dnpa2 54 INAQLNGLQIALAEKGIPLLFREVDDFVASVEIVKQVCAENSVTHLFYNYQYEV 107 (200)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECSSHHHHHHHHHHHHHHHTCCEEEEECCCSH
T ss_pred HHHHHHHHHhhhhhccceeEEEEecccccchhHHHHHHHhcCCcEEEEeccccH
Confidence 455677788888999999888877543443333333333345667777777653
No 34
>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=50.18 E-value=6.5 Score=24.04 Aligned_cols=25 Identities=8% Similarity=0.089 Sum_probs=16.6
Q ss_pred HHHHHHHHHhhhCCCcEEEEcCCCCc
Q 034415 50 DVIGKLAVRSVDDGFKIQVVSPNKDS 75 (95)
Q Consensus 50 DvIatla~~~~~~~~~v~IvS~DkDl 75 (95)
|...++. ...+.|.+|+|+|+|+--
T Consensus 25 ~a~~~I~-~L~~~Gi~v~ilTGD~~~ 49 (135)
T d2b8ea1 25 SAKPAVQ-ELKRMGIKVGMITGDNWR 49 (135)
T ss_dssp THHHHHH-HHHHTTCEEEEECSSCHH
T ss_pred cHHHHHH-HHHHcCCEEEEEcCcchh
Confidence 4444444 356678889999988754
No 35
>d2aama1 c.1.8.15 (A:28-312) Hypothetical protein TM1410 {Thermotoga maritima [TaxId: 2336]}
Probab=49.42 E-value=12 Score=25.71 Aligned_cols=55 Identities=13% Similarity=0.071 Sum_probs=37.6
Q ss_pred hhhHHhHHHHHHHHHHCCCcEEecCCcc-------hhHHHHHHHHHhhhCCCcEEEEcCCCCc
Q 034415 20 DTMVQGLQYLKASIKAMSIKVIEVPGVE-------ADDVIGKLAVRSVDDGFKIQVVSPNKDS 75 (95)
Q Consensus 20 ~~l~~q~~~i~~~l~~~gi~~~~~~g~E-------ADDvIatla~~~~~~~~~v~IvS~DkDl 75 (95)
++....++.++.+ ...|++++.++=.. .-..+..+++++.+.|+...|.+.|-||
T Consensus 211 ~~~~~~~~~l~~~-~~~G~~V~~idY~~~~~~~~~~~~~~~~~~~~~~~~GF~pyvs~~dl~L 272 (285)
T d2aama1 211 NETKSRLEYLIRL-NRKGKFILSVDYVDDGSDSFENISRILDYYEKAKRNGCIPYAARSDLEL 272 (285)
T ss_dssp HHHHHHHHHHHHH-HHTTCEEEEEEEEECSSCBHHHHHHHHHHHHHHHHTTEEEEEEETTCCC
T ss_pred HHHHHHHHHHHHH-HHcCCcEEEEEcCCCCccchhhHHHHHHHHHHHHHcCCeeEEeccchhh
Confidence 4455556666665 46799988875221 2245777788888899988888777776
No 36
>d2qi2a3 d.79.3.2 (A:244-338) Cell division protein pelota {Thermoplasma acidophilum [TaxId: 2303]}
Probab=49.35 E-value=2.6 Score=24.91 Aligned_cols=52 Identities=12% Similarity=0.075 Sum_probs=32.3
Q ss_pred HHHHHHHHHHCCCcE-EecCCcchhHHHHHHHHHhhhCCCcEEEEcCCCCc--cc
Q 034415 26 LQYLKASIKAMSIKV-IEVPGVEADDVIGKLAVRSVDDGFKIQVVSPNKDS--QI 77 (95)
Q Consensus 26 ~~~i~~~l~~~gi~~-~~~~g~EADDvIatla~~~~~~~~~v~IvS~DkDl--QL 77 (95)
+..+.+.++.--+.. +..+.+.-.+-+.-+...+.+.|.+|.|+|+|.+- ||
T Consensus 27 ~~eV~~A~e~GAVe~Llisd~l~r~~~~~~l~~~~~~~g~~v~iis~~~e~G~~L 81 (95)
T d2qi2a3 27 RDQTESALQMGALSDLIITDEMFRTEDGRRSLSIAQTVGTRIHIVSVSNDPGQIV 81 (95)
T ss_dssp HHHHHHHHHTTCEEEEEEEHHHHTSHHHHHHHHHHHHHTCEEEEECTTSHHHHHH
T ss_pred HHHHHHHHHcCCCcEEEEechhhcchhHHHHHHHHHHcCCEEEEECCCCHHHHHH
Confidence 344555555323333 33334433444566777777789999999999998 55
No 37
>d2vgna3 d.79.3.2 (A:278-381) Dom34 {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=49.30 E-value=4.7 Score=23.92 Aligned_cols=52 Identities=15% Similarity=0.058 Sum_probs=32.6
Q ss_pred HHHHHHHHHHCCCc-EEecCCc------chhHHHHHHHHHhhhCCCcEEEEcCCCCc--cc
Q 034415 26 LQYLKASIKAMSIK-VIEVPGV------EADDVIGKLAVRSVDDGFKIQVVSPNKDS--QI 77 (95)
Q Consensus 26 ~~~i~~~l~~~gi~-~~~~~g~------EADDvIatla~~~~~~~~~v~IvS~DkDl--QL 77 (95)
...+.+.++.--+. .+..+.+ +-..-+-.++..+.+.|.+|.|+|+|.+- ||
T Consensus 25 ~~~v~~A~e~gAv~~LlIsd~l~r~~~~~~r~~~~~l~~~~~~~g~~v~iiS~~~~~G~qL 85 (104)
T d2vgna3 25 EKEVVKAAEYGAISYLLLTDKVLHSDNIAQREEYLKLMDSVESNGGKALVLSTLHSLGEEL 85 (104)
T ss_dssp HHHHHHHHHTTCEEEEEEETTGGGSSCHHHHHHHHHHHHHHHHTTCEEEEECTTSHHHHHH
T ss_pred HHHHHHHHHhCCceEEEEecccccccccchHHHHHHHHHHHHhcCCEEEEEcCCChhHHHH
Confidence 34455555543333 3333444 22333556777788889999999999999 66
No 38
>d2ftsa3 c.57.1.2 (A:499-653) Gephyrin, domain 5 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=49.28 E-value=21 Score=21.71 Aligned_cols=52 Identities=25% Similarity=0.304 Sum_probs=36.9
Q ss_pred HHHHHHHHHHCCCcEEecC--CcchhHHHHHHHHHhhhCCCcEEEEcC-----CCCc--cccc
Q 034415 26 LQYLKASIKAMSIKVIEVP--GVEADDVIGKLAVRSVDDGFKIQVVSP-----NKDS--QILS 79 (95)
Q Consensus 26 ~~~i~~~l~~~gi~~~~~~--g~EADDvIatla~~~~~~~~~v~IvS~-----DkDl--QLv~ 79 (95)
-..+..+++.+|+.+.... .-+.+.+..++.+...+ ..++|.|+ ++|+ +.+.
T Consensus 29 ~~~l~~~l~~~G~~v~~~~~v~Dd~~~i~~~l~~~~~~--~DliittGG~s~g~~D~~~~~l~ 89 (155)
T d2ftsa3 29 RSTLLATIQEHGYPTINLGIVGDNPDDLLNALNEGISR--ADVIITSGGVSMGEKDYLKQVLD 89 (155)
T ss_dssp HHHHHHHHHTTTCCEEEEEEECSSHHHHHHHHHHHHHH--CSEEEEESCCSSSCCHHHHHHHH
T ss_pred HHHHHHHhcccccceEEEEEecCchhHHHHHHHHhhcc--cCEEEEeccccCCcchhhHHHHH
Confidence 3568888999999876643 44678888888776543 57888764 7787 5554
No 39
>d1sy7a1 c.23.16.3 (A:553-736) Catalase, C-terminal domain {Neurospora crassa [TaxId: 5141]}
Probab=48.55 E-value=11 Score=23.00 Aligned_cols=37 Identities=14% Similarity=0.144 Sum_probs=30.2
Q ss_pred CcEEecCCcchhHHHHHHHHHhhhCCCcEEEEcCCCCc
Q 034415 38 IKVIEVPGVEADDVIGKLAVRSVDDGFKIQVVSPNKDS 75 (95)
Q Consensus 38 i~~~~~~g~EADDvIatla~~~~~~~~~v~IvS~DkDl 75 (95)
+-++..+|+++-++.+.+. .+...|+++.++|.+.+.
T Consensus 6 I~ilv~dG~~~~e~~~~~~-~l~~ag~~v~ivs~~~~~ 42 (184)
T d1sy7a1 6 VAIIIADGYDNVAYDAAYA-AISANQAIPLVIGPRRSK 42 (184)
T ss_dssp EEEECCTTBCHHHHHHHHH-HHHHTTCEEEEEESCSSC
T ss_pred EEEEecCCCcHHHHHHHHH-HHHHCCCEEEEEEecCCc
Confidence 4567789999999998766 466779999999988775
No 40
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}
Probab=47.44 E-value=9.7 Score=26.61 Aligned_cols=23 Identities=26% Similarity=0.560 Sum_probs=20.4
Q ss_pred HHHHHHHHHhhhCCCcEEEEcCC
Q 034415 50 DVIGKLAVRSVDDGFKIQVVSPN 72 (95)
Q Consensus 50 DvIatla~~~~~~~~~v~IvS~D 72 (95)
|+++.|++...++|++|.|+|++
T Consensus 21 ~vv~~La~~L~~~Gh~V~Vi~P~ 43 (477)
T d1rzua_ 21 DVVGALPIALEAHGVRTRTLIPG 43 (477)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEEC
T ss_pred HHHHHHHHHHHHcCCeEEEEecC
Confidence 58999999999999999999864
No 41
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}
Probab=46.19 E-value=7.2 Score=26.15 Aligned_cols=26 Identities=12% Similarity=0.281 Sum_probs=21.9
Q ss_pred hhHHHHHHHHHhhhCCCcEEEEcCCC
Q 034415 48 ADDVIGKLAVRSVDDGFKIQVVSPNK 73 (95)
Q Consensus 48 ADDvIatla~~~~~~~~~v~IvS~Dk 73 (95)
+-++++.||+...+.|++|.|+|++.
T Consensus 18 ~~~~~~~La~~L~~~Gh~V~Vvtp~~ 43 (437)
T d2bisa1 18 LAEALTAISEALASLGHEVLVFTPSH 43 (437)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEECT
T ss_pred HHHHHHHHHHHHHHcCCEEEEEecCC
Confidence 46788889999999999999998644
No 42
>g1pyo.1 c.17.1.1 (A:,B:) Caspase-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.85 E-value=17 Score=23.76 Aligned_cols=33 Identities=18% Similarity=0.065 Sum_probs=29.5
Q ss_pred HHHHHHHHHHCCCcEEecCCcchhHHHHHHHHH
Q 034415 26 LQYLKASIKAMSIKVIEVPGVEADDVIGKLAVR 58 (95)
Q Consensus 26 ~~~i~~~l~~~gi~~~~~~g~EADDvIatla~~ 58 (95)
-..+.++|..+|+.+....+.-+.++..++..-
T Consensus 53 a~~l~~~l~~lGF~V~~~~nlt~~em~~~l~~f 85 (257)
T g1pyo.1 53 HSTLVTLFKLLGYDVHVLCDQTAQEMQEKLQNF 85 (257)
T ss_dssp HHHHHHHHHHTTEEEEEEESCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHH
Confidence 466888999999999999999999999998864
No 43
>d1m72a_ c.17.1.1 (A:) Caspase-1 {Fall armyworm (Spodoptera frugiperda) [TaxId: 7108]}
Probab=45.44 E-value=17 Score=23.76 Aligned_cols=34 Identities=15% Similarity=0.301 Sum_probs=29.5
Q ss_pred HHHHHHHHHHCCCcEEecCCcchhHHHHHHHHHh
Q 034415 26 LQYLKASIKAMSIKVIEVPGVEADDVIGKLAVRS 59 (95)
Q Consensus 26 ~~~i~~~l~~~gi~~~~~~g~EADDvIatla~~~ 59 (95)
-..+.++|..+|+.+....+..+++++..+....
T Consensus 47 a~~l~~~l~~lGF~V~~~~nlt~~~m~~~l~~~~ 80 (256)
T d1m72a_ 47 SDNLSKVLKTLGFKVTVFPNLKSEEINKFIQQTA 80 (256)
T ss_dssp HHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHh
Confidence 4568889999999999999999999998887644
No 44
>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=45.39 E-value=8.2 Score=24.29 Aligned_cols=17 Identities=12% Similarity=0.442 Sum_probs=13.0
Q ss_pred hhhCCCcEEEEcCCCCc
Q 034415 59 SVDDGFKIQVVSPNKDS 75 (95)
Q Consensus 59 ~~~~~~~v~IvS~DkDl 75 (95)
+.+.|.+|+++|+|+-.
T Consensus 32 l~~~GI~v~miTGD~~~ 48 (168)
T d1wpga2 32 CRDAGIRVIMITGDNKG 48 (168)
T ss_dssp HHHTTCEEEEECSSCHH
T ss_pred HHHCcCEEEEECCCCHH
Confidence 45568889999998754
No 45
>g1sc3.1 c.17.1.1 (A:,B:) Interleukin-1beta converting enzyme (a cysteine protease) {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.22 E-value=14 Score=24.13 Aligned_cols=33 Identities=12% Similarity=0.129 Sum_probs=28.7
Q ss_pred HHHHHHHHHHCCCcEEecCCcchhHHHHHHHHH
Q 034415 26 LQYLKASIKAMSIKVIEVPGVEADDVIGKLAVR 58 (95)
Q Consensus 26 ~~~i~~~l~~~gi~~~~~~g~EADDvIatla~~ 58 (95)
...++++|+.+|+.+....+..+.+++-.+...
T Consensus 62 a~~l~~~l~~lGF~V~~~~nlt~~e~~~~l~~~ 94 (261)
T g1sc3.1 62 ITGMTMLLQNLGYSVDVKKNLTASDMTTELEAF 94 (261)
T ss_dssp HHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEeeCCCHHHHHHHHHHH
Confidence 456888999999999999999999999888654
No 46
>d2j07a2 c.28.1.1 (A:2-171) DNA photolyase {Thermus thermophilus [TaxId: 274]}
Probab=44.28 E-value=31 Score=21.18 Aligned_cols=49 Identities=12% Similarity=0.087 Sum_probs=35.8
Q ss_pred hHHhHHHHHHHHHHCCCcEEecCCcchhHHHHHHHHHhhhCCCcEEEEcCCCC
Q 034415 22 MVQGLQYLKASIKAMSIKVIEVPGVEADDVIGKLAVRSVDDGFKIQVVSPNKD 74 (95)
Q Consensus 22 l~~q~~~i~~~l~~~gi~~~~~~g~EADDvIatla~~~~~~~~~v~IvS~DkD 74 (95)
+.+.+..+++-|..+|+..+...| ++-++|..+++.. +...+.++.|-+
T Consensus 49 l~~sL~~L~~~L~~~g~~L~v~~G-~~~~~l~~l~~~~---~i~~V~~n~~~~ 97 (170)
T d2j07a2 49 FLENVRALREAYRARGGALWVLEG-LPWEKVPEAARRL---KAKAVYALTSHT 97 (170)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEES-CHHHHHHHHHHHT---TCSEEEEECCCS
T ss_pred HHHHHHHHHHhhhccccchhhhhh-hHHHHHHHHHHHh---hhhHHHhhccch
Confidence 455677788888999999888887 6777777777654 456666666654
No 47
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=43.87 E-value=9.7 Score=24.57 Aligned_cols=22 Identities=23% Similarity=0.404 Sum_probs=18.7
Q ss_pred HHHHHHHHhhhCCCcEEEEcCC
Q 034415 51 VIGKLAVRSVDDGFKIQVVSPN 72 (95)
Q Consensus 51 vIatla~~~~~~~~~v~IvS~D 72 (95)
+-+.+|....+.|.+|.+++.|
T Consensus 24 vaa~lA~~lA~~G~rVLlvD~D 45 (296)
T d1ihua1 24 ISCATAIRLAEQGKRVLLVSTD 45 (296)
T ss_dssp HHHHHHHHHHHTTCCEEEEECC
T ss_pred HHHHHHHHHHHCCCCEEEEeCC
Confidence 4567788888899999999998
No 48
>d2i09a2 d.327.1.1 (A:108-226) Phosphopentomutase DeoB {Streptococcus mutans [TaxId: 1309]}
Probab=43.40 E-value=7.3 Score=24.13 Aligned_cols=57 Identities=23% Similarity=0.209 Sum_probs=30.7
Q ss_pred CCChhhHHhHHHHHHHHHHCCCcEEe--cCCcchhHHHHHHHHHhhhCCCcEEEEcCCCCccccc
Q 034415 17 PTPDTMVQGLQYLKASIKAMSIKVIE--VPGVEADDVIGKLAVRSVDDGFKIQVVSPNKDSQILS 79 (95)
Q Consensus 17 ~~p~~l~~q~~~i~~~l~~~gi~~~~--~~g~EADDvIatla~~~~~~~~~v~IvS~DkDlQLv~ 79 (95)
.-|++| +.++.+..|.+.+. -.-+-...||.-+.....+.|..|+--|+|.=||+-.
T Consensus 7 gFP~el------i~~~~~~~g~~~il~gN~~aSGT~II~~~Geeh~~TG~pIvYTSaDSVfQIAa 65 (119)
T d2i09a2 7 GFPEEI------ISKIEKFSGRKVIREANKPYSGTAVIDDFGPRQMETGELIIYTSADPVLQIAA 65 (119)
T ss_dssp CCCHHH------HHHHHHHHSCCBCGGGCSBCCCC-------------CCBEEEECSSSEEEEEC
T ss_pred CCCHHH------HHHHHHHhCCCeeccCCccCcHHHHHHHHHHHHHHhCCeEEEecCCceeeeee
Confidence 356666 44556667888773 3345556788888888888899999999998777654
No 49
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=42.27 E-value=12 Score=23.58 Aligned_cols=29 Identities=10% Similarity=0.155 Sum_probs=20.3
Q ss_pred HhhhCCCcEEEEcCCCCc-ccccCCeEEEEe
Q 034415 58 RSVDDGFKIQVVSPNKDS-QILSHSLCLLRI 87 (95)
Q Consensus 58 ~~~~~~~~v~IvS~DkDl-QLv~~~v~v~~~ 87 (95)
...+.+.+|+|+|.|.++ ..+ +++-++.+
T Consensus 252 ~~~~~~~qviv~TH~~~~~~~~-D~ii~l~~ 281 (292)
T g1f2t.1 252 RYLKKIPQVILVSHDEELKDAA-DHVIRISL 281 (292)
T ss_dssp HTGGGSSEEEEEESCGGGGGGC-SEEEEEEE
T ss_pred HHHhCCCEEEEEeecHHHHHhC-CEEEEEEe
Confidence 344456799999999999 765 45555544
No 50
>d2nqra3 c.57.1.2 (A:178-326) MoeA, central domain {Escherichia coli [TaxId: 562]}
Probab=40.96 E-value=27 Score=21.34 Aligned_cols=52 Identities=12% Similarity=0.116 Sum_probs=36.6
Q ss_pred HHHHHHHHHHCCCcEEecCC--cchhHHHHHHHHHhhhCCCcEEEEcC-----CCCc--cccc
Q 034415 26 LQYLKASIKAMSIKVIEVPG--VEADDVIGKLAVRSVDDGFKIQVVSP-----NKDS--QILS 79 (95)
Q Consensus 26 ~~~i~~~l~~~gi~~~~~~g--~EADDvIatla~~~~~~~~~v~IvS~-----DkDl--QLv~ 79 (95)
-..+..+++.+|+.+....- -..|.+...+.+...+ ..++|.|+ ++|+ ..++
T Consensus 29 ~~~l~~~l~~~G~~v~~~~~v~Dd~~~i~~~l~~~~~~--~DivittGG~s~g~~D~~~~~l~ 89 (149)
T d2nqra3 29 RLAVHLMLEQLGCEVINLGIIRDDPHALRAAFIEADSQ--ADVVISSGGVSVGEADYTKTILE 89 (149)
T ss_dssp HHHHHHHHHHTTCEEEEEEEECSSHHHHHHHHHHHHHH--CSEEEECSSSCSSSCSHHHHHHH
T ss_pred hHHHHhhhhhcceEEEEccccCChHHHHHHHHHhcccc--cCEEEEcCCccCCchHHHHHHHH
Confidence 45688889999998877653 3556666666655543 68999886 5888 5665
No 51
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=40.83 E-value=12 Score=24.46 Aligned_cols=32 Identities=19% Similarity=0.252 Sum_probs=24.3
Q ss_pred cCCcchhHHHHHHHHHhhhCCCcEEEEcCCCC
Q 034415 43 VPGVEADDVIGKLAVRSVDDGFKIQVVSPNKD 74 (95)
Q Consensus 43 ~~g~EADDvIatla~~~~~~~~~v~IvS~DkD 74 (95)
..|.-===.+|-||.++.++|.+|.++|.|.-
T Consensus 18 p~GvGKTTTiaKLA~~~~~~g~kV~lit~Dt~ 49 (207)
T d1ls1a2 18 LQGSGKTTTAAKLALYYKGKGRRPLLVAADTQ 49 (207)
T ss_dssp CTTTTHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CCCCCHHHHHHHHHHHHHHCCCcEEEEecccc
Confidence 34444445678888888888999999999964
No 52
>d1b24a1 d.95.2.1 (A:7-99) DNA endonuclease I-dmoI {Archaeon Desulfurococcus mobilis [TaxId: 2274]}
Probab=40.57 E-value=9.2 Score=22.33 Aligned_cols=30 Identities=20% Similarity=0.479 Sum_probs=19.9
Q ss_pred hhhcCCCC-------CChhhHHh--HHHHHHHHHHCCCc
Q 034415 10 SYKNNRPP-------TPDTMVQG--LQYLKASIKAMSIK 39 (95)
Q Consensus 10 ~YKanR~~-------~p~~l~~q--~~~i~~~l~~~gi~ 39 (95)
-||+||.+ ..|.+..+ -|.+.-+++++|+.
T Consensus 22 rYkG~RtEYRVViTQK~e~~i~~~~a~m~~~Ll~EL~lk 60 (93)
T d1b24a1 22 KYKGNRSEYRVVITQKSENLIKQHIAPLMQFLIDELNVK 60 (93)
T ss_dssp ECSTTCEEEEEEEEESCHHHHHHTHHHHHHHHHHHTTCC
T ss_pred EEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHHHHcCCC
Confidence 48999975 44555444 35677777777765
No 53
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=39.16 E-value=13 Score=24.51 Aligned_cols=32 Identities=28% Similarity=0.343 Sum_probs=24.1
Q ss_pred cCCcchhHHHHHHHHHhhhCCCcEEEEcCCCC
Q 034415 43 VPGVEADDVIGKLAVRSVDDGFKIQVVSPNKD 74 (95)
Q Consensus 43 ~~g~EADDvIatla~~~~~~~~~v~IvS~DkD 74 (95)
..|.-===.||-||.++.++|.+|.++|.|.-
T Consensus 17 ptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~ 48 (211)
T d2qy9a2 17 VNGVGKTTTIGKLARQFEQQGKSVMLAAGDTF 48 (211)
T ss_dssp CTTSCHHHHHHHHHHHHHTTTCCEEEECCCTT
T ss_pred CCCCCHHHHHHHHHHHHHHCCCcEEEEecccc
Confidence 34444444678888888888999999999975
No 54
>d1gpua1 c.36.1.10 (A:3-337) Transketolase (TK), PP module {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=38.56 E-value=26 Score=24.43 Aligned_cols=47 Identities=9% Similarity=0.061 Sum_probs=26.2
Q ss_pred HHHHHHHCCCcEEecCCcc--hhHHHHHHHHHhhhCCCc-EEEEcCCCCc
Q 034415 29 LKASIKAMSIKVIEVPGVE--ADDVIGKLAVRSVDDGFK-IQVVSPNKDS 75 (95)
Q Consensus 29 i~~~l~~~gi~~~~~~g~E--ADDvIatla~~~~~~~~~-v~IvS~DkDl 75 (95)
+.+-++++|+.+++++|.- ...+...++......+.+ ++|+-+=|..
T Consensus 201 ~~~~f~a~GW~vi~vdg~~~d~~~~~~~~~~~~~~~~KPt~Iia~TikGk 250 (335)
T d1gpua1 201 VAKRYEAYGWEVLYVENGNEDLAGIAKAIAQAKLSKDKPTLIKMTTTIGY 250 (335)
T ss_dssp HHHHHHHHTCEEEEESCTTTCHHHHHHHHHHHHHCTTSCEEEEEECCTTT
T ss_pred HHHHHHhCCCcEEEEcCCchhHHHHHHHHhhhhcccCCCcceEEeeccCC
Confidence 5566889999999997543 333333333333333445 4455544443
No 55
>d1uz5a3 c.57.1.2 (A:181-328) MoeA, central domain {Archaeon Pyrococcus horikoshii, PH0582 [TaxId: 53953]}
Probab=37.52 E-value=36 Score=20.57 Aligned_cols=51 Identities=14% Similarity=0.090 Sum_probs=32.9
Q ss_pred HHHHHHHHHCCCcEEecC--CcchhHHHHHHHHHhhhCCCcEEEEcC-----CCCc--cccc
Q 034415 27 QYLKASIKAMSIKVIEVP--GVEADDVIGKLAVRSVDDGFKIQVVSP-----NKDS--QILS 79 (95)
Q Consensus 27 ~~i~~~l~~~gi~~~~~~--g~EADDvIatla~~~~~~~~~v~IvS~-----DkDl--QLv~ 79 (95)
..|..+++.+|+.+.... .-..+.+...+.+...+ ..++|.|+ ++|+ +.+.
T Consensus 30 ~~l~~~l~~~G~~v~~~~~v~Dd~~~i~~~i~~~~~~--~DliIttGG~s~g~~D~~~~~l~ 89 (148)
T d1uz5a3 30 RALCDAINELGGEGIFMGVARDDKESLKALIEKAVNV--GDVVVISGGASGGTKDLTASVIE 89 (148)
T ss_dssp HHHHHHHHHHTSEEEEEEEECSSHHHHHHHHHHHHHH--CSEEEEECCC-----CHHHHHHH
T ss_pred HHHHHhhhcccccceeeeeeccHHHHHHHHHHhhhcc--ccEEEECCCcccchhhHHHHHHH
Confidence 457888899999876654 44667777766655544 57888774 4576 4444
No 56
>g1qtn.1 c.17.1.1 (A:,B:) Caspase-8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.17 E-value=32 Score=21.95 Aligned_cols=34 Identities=6% Similarity=0.148 Sum_probs=29.4
Q ss_pred HHHHHHHHHHCCCcEEecCCcchhHHHHHHHHHh
Q 034415 26 LQYLKASIKAMSIKVIEVPGVEADDVIGKLAVRS 59 (95)
Q Consensus 26 ~~~i~~~l~~~gi~~~~~~g~EADDvIatla~~~ 59 (95)
...+.++|+.+|+.+....+.-+.++.-++....
T Consensus 45 a~~l~~~l~~lGF~V~~~~nlt~~~~~~~l~~~~ 78 (242)
T g1qtn.1 45 AGALTTTFEELHFEIKPHDDCTVEQIYEILKIYQ 78 (242)
T ss_dssp HHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEECcCCCHHHHHHHHHHhh
Confidence 4558888999999999999999999999888644
No 57
>d1w25a1 c.23.1.1 (A:2-140) Response regulator PleD, receiver domain {Caulobacter crescentus [TaxId: 155892]}
Probab=36.05 E-value=38 Score=19.79 Aligned_cols=33 Identities=15% Similarity=0.262 Sum_probs=18.0
Q ss_pred cCCcchhHHHHHHHHHhhhCCCcEEEEcCCCCc
Q 034415 43 VPGVEADDVIGKLAVRSVDDGFKIQVVSPNKDS 75 (95)
Q Consensus 43 ~~g~EADDvIatla~~~~~~~~~v~IvS~DkDl 75 (95)
+|+..+.+++..+-......+.+|+++|+=.+.
T Consensus 55 ~p~~~G~~~~~~ir~~~~~~~~piI~lt~~~~~ 87 (139)
T d1w25a1 55 MPGMDGFTVCRKLKDDPTTRHIPVVLITALDGR 87 (139)
T ss_dssp CSSSCHHHHHHHHHHSTTTTTSCEEEEECSSCH
T ss_pred ccCCCchHHHHHhhhcccccCCCEEEEEcCCCH
Confidence 355556666554443333345567777765554
No 58
>d1nj1a1 c.51.1.1 (A:284-410) Prolyl-tRNA synthetase (ProRS) domain {Arhaeon (Methanothermobacter thermautotrophicus) [TaxId: 145262]}
Probab=35.69 E-value=13 Score=21.95 Aligned_cols=53 Identities=15% Similarity=0.149 Sum_probs=37.5
Q ss_pred hhhHHhHHHHHHHHHHCCCcEEecCCcchhHHHHHHHHHhhhCCCcEEEEcCCCCc
Q 034415 20 DTMVQGLQYLKASIKAMSIKVIEVPGVEADDVIGKLAVRSVDDGFKIQVVSPNKDS 75 (95)
Q Consensus 20 ~~l~~q~~~i~~~l~~~gi~~~~~~g~EADDvIatla~~~~~~~~~v~IvS~DkDl 75 (95)
+++...-..+...|...||.+..-+. +.=+|.=.+.+...|.+..|+=|++++
T Consensus 26 e~~~~~a~~l~~~L~~~gi~v~~D~r---~~~~g~K~~~a~~~giP~~iiiG~ke~ 78 (127)
T d1nj1a1 26 EEVMEACRELRSRLEAAGFRVHLDDR---DIRAGRKYYEWEMRGVPLRVEIGPRDL 78 (127)
T ss_dssp HHHHHHHHHHHHHHHTTTCCEEECCC---SSCHHHHHHHHHHEECSEEEEECHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCceEEEec---cchHHHHHHHHHhhcCchheeeccccc
Confidence 44555666677778889998865544 334555445566679999999999997
No 59
>d1vlja_ e.22.1.2 (A:) NADH-dependent butanol dehydrogenase A (TM0820) {Thermotoga maritima [TaxId: 2336]}
Probab=35.51 E-value=41 Score=23.29 Aligned_cols=43 Identities=16% Similarity=0.247 Sum_probs=32.1
Q ss_pred HHHHHHHHHHCCCcEEecCCcchh---HHHHHHHHHhhhCCCcEEE
Q 034415 26 LQYLKASIKAMSIKVIEVPGVEAD---DVIGKLAVRSVDDGFKIQV 68 (95)
Q Consensus 26 ~~~i~~~l~~~gi~~~~~~g~EAD---DvIatla~~~~~~~~~v~I 68 (95)
++.+.+.|+..|+.+....+++++ +.+-.++..+...+..++|
T Consensus 52 ~~~l~~~L~~~gi~~~~f~~v~~~pt~~~v~~~~~~~~~~~~D~II 97 (398)
T d1vlja_ 52 YDQVVDSLKKHGIEWVEVSGVKPNPVLSKVHEAVEVAKKEKVEAVL 97 (398)
T ss_dssp HHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHhcCCeEEEEcCccCCCCHHHHHHHhhhcccccCceEE
Confidence 577888899999998888877753 5555566667767777666
No 60
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=35.17 E-value=16 Score=23.76 Aligned_cols=29 Identities=24% Similarity=0.260 Sum_probs=21.9
Q ss_pred CcchhHHHHHHHHHhhhCCCcEEEEcCCC
Q 034415 45 GVEADDVIGKLAVRSVDDGFKIQVVSPNK 73 (95)
Q Consensus 45 g~EADDvIatla~~~~~~~~~v~IvS~Dk 73 (95)
|.-===.||-||.++...|.+|.++|.|.
T Consensus 16 GvGKTTTiaKLA~~~~~~g~kV~lit~Dt 44 (207)
T d1okkd2 16 GVGKTTTIAKLGRYYQNLGKKVMFCAGDT 44 (207)
T ss_dssp TSSHHHHHHHHHHHHHTTTCCEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHCCCcEEEEEecc
Confidence 33333457778888888899999999997
No 61
>d2d00a1 c.149.1.1 (A:6-109) V-type ATP synthase subunit F, AtpF {Thermus thermophilus [TaxId: 274]}
Probab=35.04 E-value=37 Score=19.46 Aligned_cols=38 Identities=11% Similarity=0.173 Sum_probs=26.4
Q ss_pred HHHCCCcEEecCCcchhHHHHHHHHHhhhCCCcEEEEcCC
Q 034415 33 IKAMSIKVIEVPGVEADDVIGKLAVRSVDDGFKIQVVSPN 72 (95)
Q Consensus 33 l~~~gi~~~~~~g~EADDvIatla~~~~~~~~~v~IvS~D 72 (95)
+..+|+..+.. ...+++..++-+...+.++-|+++|.+
T Consensus 13 FrLaGi~~~~v--~~~ee~~~~l~~l~~~~d~gII~Ite~ 50 (104)
T d2d00a1 13 FRLAGLEGYGA--SSAEEAQSLLETLVERGGYALVAVDEA 50 (104)
T ss_dssp HHHTTSEEEEC--SSHHHHHHHHHHHHHHCCCSEEEEETT
T ss_pred HHHcCCeeecC--CCHHHHHHHHHHHHhCCCeEEEEEcHH
Confidence 45678876654 335666666666556778899999965
No 62
>d1p5fa_ c.23.16.2 (A:) DJ-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.85 E-value=42 Score=20.48 Aligned_cols=35 Identities=29% Similarity=0.325 Sum_probs=26.7
Q ss_pred cEEecCCcchhHHHHHHHHHhhhCCCcEEEEcCC-CC
Q 034415 39 KVIEVPGVEADDVIGKLAVRSVDDGFKIQVVSPN-KD 74 (95)
Q Consensus 39 ~~~~~~g~EADDvIatla~~~~~~~~~v~IvS~D-kD 74 (95)
-++..+|+|.-+.++.+.. ..+.|++|.++|.+ ++
T Consensus 5 lvll~~Gfe~~E~~~p~~~-l~~ag~~v~~~s~~~~~ 40 (186)
T d1p5fa_ 5 LVILAKGAEEMETVIPVDV-MRRAGIKVTVAGLAGKD 40 (186)
T ss_dssp EEEECTTCCHHHHHHHHHH-HHHTTCEEEEEETTCSS
T ss_pred EEEeCCCCCHHHHHHHHHH-HHHCCCEEEEEEecCCc
Confidence 4667899999998887654 56679999999954 44
No 63
>d1g5ha1 c.51.1.1 (A:343-469) The aaRS-like accessory subunit of mitochondrial polymerase gamma, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=34.19 E-value=29 Score=20.30 Aligned_cols=56 Identities=13% Similarity=-0.007 Sum_probs=37.3
Q ss_pred hhhHHhHHHHHHHHHHCCCcEEecCCcchhHHHHHHHHHhhhCCCcEEEEcCCCCc
Q 034415 20 DTMVQGLQYLKASIKAMSIKVIEVPGVEADDVIGKLAVRSVDDGFKIQVVSPNKDS 75 (95)
Q Consensus 20 ~~l~~q~~~i~~~l~~~gi~~~~~~g~EADDvIatla~~~~~~~~~v~IvS~DkDl 75 (95)
+++.+.-..+.+.|...|+.+.......-+.=+|.=-+.+...|.+..|+=|++++
T Consensus 25 ~e~~~~a~~l~~~L~~~gi~v~~~~~D~~~~~lg~k~~~a~~~giP~~iiiG~~e~ 80 (127)
T d1g5ha1 25 VELRQVCQGLLNELLENGISVWPGYSETVHSSLEQLHSKYDEMSVLFSVLVTETTL 80 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEGGGSCCCSCHHHHHHHHHHTTCSEEEEECHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCceeeeeecCCCcCHHHHHHHHHHhCCcEEEEEcCCcc
Confidence 45555556677778888998754322212223555555677789999999999997
No 64
>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=33.88 E-value=14 Score=21.39 Aligned_cols=24 Identities=29% Similarity=0.249 Sum_probs=19.8
Q ss_pred HHHHHHHHhhhCCCcEEEEcCCCC
Q 034415 51 VIGKLAVRSVDDGFKIQVVSPNKD 74 (95)
Q Consensus 51 vIatla~~~~~~~~~v~IvS~DkD 74 (95)
+=.++|+.+.+.|++|++.+.|.+
T Consensus 12 iG~alA~~la~~G~~V~l~~R~~e 35 (212)
T d1jaya_ 12 LGKGLALRLATLGHEIVVGSRREE 35 (212)
T ss_dssp HHHHHHHHHHTTTCEEEEEESSHH
T ss_pred HHHHHHHHHHHCCCEEEEEECCHH
Confidence 455788889999999999987755
No 65
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=33.20 E-value=32 Score=22.75 Aligned_cols=60 Identities=15% Similarity=0.206 Sum_probs=38.1
Q ss_pred HHHHHHHHHHCCCcEEecC--C---cchhHHHHHHHHHhhhCCCcEEEEcCCCCc-ccccCCeEEEE
Q 034415 26 LQYLKASIKAMSIKVIEVP--G---VEADDVIGKLAVRSVDDGFKIQVVSPNKDS-QILSHSLCLLR 86 (95)
Q Consensus 26 ~~~i~~~l~~~gi~~~~~~--g---~EADDvIatla~~~~~~~~~v~IvS~DkDl-QLv~~~v~v~~ 86 (95)
+...+.++..--+-++..| | .+..++...+-. ..+.|..|+++|.|=+. .-++++|.|++
T Consensus 159 v~iAraL~~~P~llilDEPt~gLD~~~~~~i~~~i~~-l~~~g~til~vsHdl~~~~~~~Drv~vm~ 224 (254)
T d1g6ha_ 159 VEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLE-LKAKGITFLIIEHRLDIVLNYIDHLYVMF 224 (254)
T ss_dssp HHHHHHHHTCCSEEEEESTTTTCCHHHHHHHHHHHHH-HHHTTCEEEEECSCCSTTGGGCSEEEEEE
T ss_pred HHHHHHHHhCcCchhhcCCcccCCHHHHHHHHHHHHH-HHHCCCEEEEEeCcHHHHHHhCCEEEEEe
Confidence 3444444444344444434 2 245555555543 55678999999999998 77888888875
No 66
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=32.98 E-value=17 Score=23.78 Aligned_cols=32 Identities=31% Similarity=0.411 Sum_probs=22.0
Q ss_pred cCCcchhHHHHHHHHHhhhCCCcEEEEcCCCC
Q 034415 43 VPGVEADDVIGKLAVRSVDDGFKIQVVSPNKD 74 (95)
Q Consensus 43 ~~g~EADDvIatla~~~~~~~~~v~IvS~DkD 74 (95)
..|.-===.+|-||.++..+|.+|.++|.|.-
T Consensus 20 ptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~ 51 (211)
T d1j8yf2 20 VQGTGKATTAGKLAYFYKKKGFKVGLVGADVY 51 (211)
T ss_dssp SCCC----HHHHHHHHHHHTTCCEEEEECCCS
T ss_pred CCCCCHHHHHHHHHHHHHHCCCceEEEEeecc
Confidence 33444444677888888888999999999953
No 67
>d1wd7a_ c.113.1.1 (A:) Probable uroporphyrinogen-III synthase {Thermus thermophilus [TaxId: 274]}
Probab=32.81 E-value=50 Score=21.13 Aligned_cols=46 Identities=9% Similarity=0.071 Sum_probs=31.7
Q ss_pred HHHHHHHHHCCCcEEecCCcch---hHHHHHHHHHhhhCCCcEEEEcCC
Q 034415 27 QYLKASIKAMSIKVIEVPGVEA---DDVIGKLAVRSVDDGFKIQVVSPN 72 (95)
Q Consensus 27 ~~i~~~l~~~gi~~~~~~g~EA---DDvIatla~~~~~~~~~v~IvS~D 72 (95)
+.+.+.|...|+.+....-|+. ++....+.......+..++++||=
T Consensus 137 ~~L~~~L~~~G~~v~~v~~Y~t~~~~~~~~~l~~~l~~~~~d~V~ftS~ 185 (254)
T d1wd7a_ 137 PLLENALAERGYRVLPLMPYRHLPDPEGILRLEEALLRGEVDALAFVAA 185 (254)
T ss_dssp HHHHHHHHHTTEEEEEECSEECCBCHHHHHHHHHHHHTTCCSEEEESSH
T ss_pred HHHHHHHHhccCcceEEEEeeeeccccChHHHHHHHhcCCceEEEeCCH
Confidence 3466778889999988888764 445555555566556777777653
No 68
>d1oi4a1 c.23.16.2 (A:23-192) Hypothetical protein YhbO {Escherichia coli [TaxId: 562]}
Probab=32.37 E-value=26 Score=21.32 Aligned_cols=36 Identities=11% Similarity=0.167 Sum_probs=26.9
Q ss_pred CcEEecCCcchhHHHHHHHHHhhhCCCcEEEEcCCCC
Q 034415 38 IKVIEVPGVEADDVIGKLAVRSVDDGFKIQVVSPNKD 74 (95)
Q Consensus 38 i~~~~~~g~EADDvIatla~~~~~~~~~v~IvS~DkD 74 (95)
+.++..+|+|.-++.+.+. .+.+.|++|.++|....
T Consensus 4 Iail~~dgf~~~E~~~~~~-~l~~ag~~v~~vs~~~~ 39 (170)
T d1oi4a1 4 IAVLITDEFEDSEFTSPAD-EFRKAGHEVITIEKQAG 39 (170)
T ss_dssp EEEECCTTBCTHHHHHHHH-HHHHTTCEEEEEESSTT
T ss_pred EEEEeCCCcCHHHHHHHHH-HHHHCCCEEEeccCCCC
Confidence 3466788999999888765 45667889999987643
No 69
>d1wu2a3 c.57.1.2 (A:181-324) MoeA, central domain {Pyrococcus horikoshii, PH1647 [TaxId: 53953]}
Probab=32.34 E-value=27 Score=21.17 Aligned_cols=51 Identities=12% Similarity=0.083 Sum_probs=34.1
Q ss_pred HHHHHHHHHCCCcEEecC--CcchhHHHHHHHHHhhhCCCcEEEEcC-----CCCc--cccc
Q 034415 27 QYLKASIKAMSIKVIEVP--GVEADDVIGKLAVRSVDDGFKIQVVSP-----NKDS--QILS 79 (95)
Q Consensus 27 ~~i~~~l~~~gi~~~~~~--g~EADDvIatla~~~~~~~~~v~IvS~-----DkDl--QLv~ 79 (95)
..+..+++.+|+.+.... .-+.|++...+.+... .+.++|.|+ ++|+ ++++
T Consensus 34 ~~L~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~--~~DlvIttGG~s~g~~D~~~~~l~ 93 (144)
T d1wu2a3 34 IMLQGLVEKFFGEPILYGVLPDDESIIKETLEKAKN--ECDIVLITGGSAFGDKDYAHKFVN 93 (144)
T ss_dssp HHHHHHHHHTTCEEEEEEEECSCHHHHTTHHHHHHH--CSEEEECC--------CCSTTTCC
T ss_pred hHHhhhhcccCcceeEEEEecchHHHHHHHHHHhhh--cccEEEEccccccCcchhccchhh
Confidence 458888999999887654 3366667666665443 368999876 7888 7765
No 70
>d2r8oa2 c.36.1.10 (A:2-332) Transketolase (TK), PP module {Escherichia coli [TaxId: 562]}
Probab=32.32 E-value=40 Score=23.30 Aligned_cols=41 Identities=12% Similarity=0.128 Sum_probs=28.1
Q ss_pred HHHHHHHCCCcEE-ecCCcchhHHHHHHHHHhhhCCCcEEEE
Q 034415 29 LKASIKAMSIKVI-EVPGVEADDVIGKLAVRSVDDGFKIQVV 69 (95)
Q Consensus 29 i~~~l~~~gi~~~-~~~g~EADDvIatla~~~~~~~~~v~Iv 69 (95)
+.+-++++|+.++ ..+|.--+.+...+.......+.+.+|+
T Consensus 200 ~~~rf~afGw~vi~~~dghd~~~i~~A~~~a~~~~~kP~~Ii 241 (331)
T d2r8oa2 200 TAMRFEAYGWHVIRDIDGHDAASIKRAVEEARAVTDKPSLLM 241 (331)
T ss_dssp HHHHHHHTTCEEEEEEETTCHHHHHHHHHHHHHCCSSCEEEE
T ss_pred HHHHHHHcCCeeecccccchHHHHHHHHHHHHhhcCCCccce
Confidence 3456789999998 5788877777776665444455666554
No 71
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=32.16 E-value=60 Score=20.95 Aligned_cols=47 Identities=15% Similarity=0.167 Sum_probs=31.6
Q ss_pred hHHHHHHHHHHCCCcEEecC-CcchhHHHHHHHHHhhhCCCcEEEEcC
Q 034415 25 GLQYLKASIKAMSIKVIEVP-GVEADDVIGKLAVRSVDDGFKIQVVSP 71 (95)
Q Consensus 25 q~~~i~~~l~~~gi~~~~~~-g~EADDvIatla~~~~~~~~~v~IvS~ 71 (95)
..+.++.+.+.+|+++.... +-+.-+++......+..+++.++++=+
T Consensus 52 A~eQL~~~a~~l~v~~~~~~~~~d~~~~l~~~~~~a~~~~~d~ilIDT 99 (211)
T d2qy9a2 52 AVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADT 99 (211)
T ss_dssp HHHHHHHHHHHTTCCEECCSTTCCHHHHHHHHHHHHHHTTCSEEEECC
T ss_pred chhhhhhhhhhcCCcccccccCCCHHHHHHHHHHHHHHcCCCEEEecc
Confidence 35667777888999987654 455556665555555567788887643
No 72
>d1zhva2 d.58.18.8 (A:62-127) Hypothetical protein Atu0741 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=32.09 E-value=17 Score=19.86 Aligned_cols=31 Identities=19% Similarity=0.282 Sum_probs=22.6
Q ss_pred CcchhHHHHHHHHHhhhCCCcEEEEcC-CCCc
Q 034415 45 GVEADDVIGKLAVRSVDDGFKIQVVSP-NKDS 75 (95)
Q Consensus 45 g~EADDvIatla~~~~~~~~~v~IvS~-DkDl 75 (95)
++++==+++.++.-..+.|..|.++|+ |.|+
T Consensus 12 ~l~~vGi~a~i~~~La~a~Is~~~vSty~~D~ 43 (66)
T d1zhva2 12 AFDETGIVLSVISPLSTNGIGIFVVSTFDGDH 43 (66)
T ss_dssp CCSSCCHHHHHHHHHHTTTCCCEEEECSSCEE
T ss_pred CchhHhHHHHHHHHHHHCCCCeEEEEeeeccE
Confidence 456666888888877778888877665 6665
No 73
>d1hdha_ c.76.1.2 (A:) Arylsulfatase B (4-sulfatase) {Pseudomonas aeruginosa [TaxId: 287]}
Probab=31.80 E-value=15 Score=25.49 Aligned_cols=30 Identities=13% Similarity=0.108 Sum_probs=24.2
Q ss_pred cchhHHHHHHHHHhhhCCC---cEEEEcCCCCc
Q 034415 46 VEADDVIGKLAVRSVDDGF---KIQVVSPNKDS 75 (95)
Q Consensus 46 ~EADDvIatla~~~~~~~~---~v~IvS~DkDl 75 (95)
.+.|+-||.+-....+.|. .+||+|+|.-.
T Consensus 286 ~~vD~~iG~ll~~L~~~gl~dnTiIIftSDHG~ 318 (525)
T d1hdha_ 286 ERMDWNIGRVVDYLRRQGELDNTFVLFMSDNGA 318 (525)
T ss_dssp HHHHHHHHHHHHHHHHTTCGGGEEEEEEESSSC
T ss_pred HHHHHhcccHHHHHHhcCCCCccEEEEecCCCc
Confidence 4569999999988877653 79999999863
No 74
>d1np7a2 c.28.1.1 (A:1-204) Cryptochrome {Synechocystis sp., pcc 6803 [TaxId: 1143]}
Probab=31.43 E-value=53 Score=20.27 Aligned_cols=49 Identities=20% Similarity=0.242 Sum_probs=34.0
Q ss_pred hHHhHHHHHHHHHHCCCcEEecCCcchhHHHHHHHHHhhhCCCcEEEEcCCCC
Q 034415 22 MVQGLQYLKASIKAMSIKVIEVPGVEADDVIGKLAVRSVDDGFKIQVVSPNKD 74 (95)
Q Consensus 22 l~~q~~~i~~~l~~~gi~~~~~~g~EADDvIatla~~~~~~~~~v~IvS~DkD 74 (95)
|.+.+..+++-|..+|+..+...| ++-++|..+++.. +...+.++.+-.
T Consensus 63 l~~sL~~L~~~L~~~g~~L~v~~G-~~~~~l~~l~~~~---~i~~V~~n~~~~ 111 (204)
T d1np7a2 63 LQQSVQNLAESLQKVGNKLLVTTG-LPEQVIPQIAKQI---NAKTIYYHREVT 111 (204)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEES-CHHHHHHHHHHHT---TEEEEEEECCCS
T ss_pred HHHHHHHHHHHHHhccchhhhhhh-hhHHHHHHHHHHh---hhhheeeecccc
Confidence 556688888889999999888777 4556666666543 455666665543
No 75
>d1fsua_ c.76.1.2 (A:) Arylsulfatase B (4-sulfatase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.20 E-value=15 Score=25.47 Aligned_cols=29 Identities=14% Similarity=0.367 Sum_probs=24.0
Q ss_pred chhHHHHHHHHHhhhCCC---cEEEEcCCCCc
Q 034415 47 EADDVIGKLAVRSVDDGF---KIQVVSPNKDS 75 (95)
Q Consensus 47 EADDvIatla~~~~~~~~---~v~IvS~DkDl 75 (95)
++|.-||.+.....+.|. .++|+++|.-.
T Consensus 231 ~~D~~iG~ll~~L~~~gl~dnTiII~tsDHG~ 262 (492)
T d1fsua_ 231 LMDEAVGNVTAALKSSGLWNNTVFIFSTDNGG 262 (492)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGEEEEEEESSCC
T ss_pred HHHHHHHHHHHHHhhcCCccccceeeccCCcc
Confidence 679999999988887763 68899999874
No 76
>d1p49a_ c.76.1.2 (A:) Steryl-sulfatase {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.85 E-value=15 Score=25.63 Aligned_cols=28 Identities=7% Similarity=0.094 Sum_probs=23.2
Q ss_pred hhHHHHHHHHHhhhCCC---cEEEEcCCCCc
Q 034415 48 ADDVIGKLAVRSVDDGF---KIQVVSPNKDS 75 (95)
Q Consensus 48 ADDvIatla~~~~~~~~---~v~IvS~DkDl 75 (95)
.|+-||-+.....+.|. .+||+|+|.-.
T Consensus 293 ~D~~iG~ll~~L~~~gl~dnTiIiftSDhG~ 323 (553)
T d1p49a_ 293 MDWSVGQILNLLDELRLANDTLIYFTSDQGA 323 (553)
T ss_dssp HHHHHHHHHHHHHHTTCGGGEEEEEEESSCC
T ss_pred cchhhhhHHHhhhhcCCCccceEEEecCCCc
Confidence 59999999988877653 68999999874
No 77
>d2fyma1 c.1.11.1 (A:140-431) Enolase {Escherichia coli [TaxId: 562]}
Probab=30.60 E-value=23 Score=24.57 Aligned_cols=54 Identities=30% Similarity=0.271 Sum_probs=34.4
Q ss_pred CCCCCChhhHHhHHHHHHHHHHCCCcEEecCCcchhHHHHHHHHHhhhCCCcEEEEcCC
Q 034415 14 NRPPTPDTMVQGLQYLKASIKAMSIKVIEVPGVEADDVIGKLAVRSVDDGFKIQVVSPN 72 (95)
Q Consensus 14 nR~~~p~~l~~q~~~i~~~l~~~gi~~~~~~g~EADDvIatla~~~~~~~~~v~IvS~D 72 (95)
+|..++++| ..++.++++...|..++-|-.| ||.-+ +++....-|.++.||-.|
T Consensus 125 ~~~~t~~el---i~~y~~l~~~yPIisIEDP~~e-dD~~g-w~~lt~~~g~~~~ivGDD 178 (292)
T d2fyma1 125 NKAFTSEEF---THFLEELTKQYPIVSIEDGLDE-SDWDG-FAYQTKVLGDKIQLVGDD 178 (292)
T ss_dssp TEEECHHHH---HHHHHHHHHHSCEEEEESCSCT-TCHHH-HHHHHHHHTTTSEEEEST
T ss_pred CccccHHHH---HHHHHHHHhcCceEEEeCCccc-ccHHH-HHHHHHhcCCcEEEeCCc
Confidence 455577776 6778888999888777555555 45433 344444446678777643
No 78
>d1jbea_ c.23.1.1 (A:) CheY protein {Escherichia coli [TaxId: 562]}
Probab=29.95 E-value=47 Score=19.00 Aligned_cols=15 Identities=7% Similarity=0.184 Sum_probs=9.9
Q ss_pred hHHHHHHHHHHCCCc
Q 034415 25 GLQYLKASIKAMSIK 39 (95)
Q Consensus 25 q~~~i~~~l~~~gi~ 39 (95)
....++.+|+..|+.
T Consensus 16 ~r~~i~~~L~~~g~~ 30 (128)
T d1jbea_ 16 MRRIVRNLLKELGFN 30 (128)
T ss_dssp HHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHCCCc
Confidence 345577777777774
No 79
>d2fe1a1 c.120.1.1 (A:1-130) Conserved hypothetical protein PAE0151 {Pyrobaculum aerophilum [TaxId: 13773]}
Probab=29.93 E-value=9.4 Score=21.65 Aligned_cols=11 Identities=0% Similarity=0.160 Sum_probs=8.8
Q ss_pred EEEEcCCCCc-c
Q 034415 66 IQVVSPNKDS-Q 76 (95)
Q Consensus 66 v~IvS~DkDl-Q 76 (95)
+.|+|.|+++ +
T Consensus 112 ~~l~T~D~~l~~ 123 (130)
T d2fe1a1 112 GKLLTLDRQLAE 123 (130)
T ss_dssp CEEECSCHHHHH
T ss_pred CEEEECCHHHHH
Confidence 4599999887 5
No 80
>d1kvka2 d.58.26.3 (A:226-394) Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=29.57 E-value=30 Score=21.34 Aligned_cols=32 Identities=9% Similarity=-0.086 Sum_probs=19.2
Q ss_pred cCCcchhHHHHHHHHHhhhCCCcEEEEcCCCC
Q 034415 43 VPGVEADDVIGKLAVRSVDDGFKIQVVSPNKD 74 (95)
Q Consensus 43 ~~g~EADDvIatla~~~~~~~~~v~IvS~DkD 74 (95)
.+.-.+..++..+.+.+...|++++.+|-+.|
T Consensus 119 ~~~~~~~~~~~~i~~~l~~~Gf~~~~~~i~~~ 150 (169)
T d1kvka2 119 LKPGLERAKVEAAKQALTGCGFDCWETSIGAP 150 (169)
T ss_dssp ECTTCCHHHHHHHHHHHHHTTCEEEEEEESCC
T ss_pred ecccchHHHHHHHHHHHHHcCCeEEEEecCCC
Confidence 34444455666666666667777777665543
No 81
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=29.40 E-value=18 Score=23.69 Aligned_cols=32 Identities=28% Similarity=0.342 Sum_probs=23.9
Q ss_pred cCCcchhHHHHHHHHHhhhCCCcEEEEcCCCC
Q 034415 43 VPGVEADDVIGKLAVRSVDDGFKIQVVSPNKD 74 (95)
Q Consensus 43 ~~g~EADDvIatla~~~~~~~~~v~IvS~DkD 74 (95)
..|.-===.+|-||.++..+|.+|.++|.|..
T Consensus 19 ptGvGKTTTiAKLAa~~~~~~~kV~lit~Dt~ 50 (213)
T d1vmaa2 19 VNGTGKTTSCGKLAKMFVDEGKSVVLAAADTF 50 (213)
T ss_dssp CTTSSHHHHHHHHHHHHHHTTCCEEEEEECTT
T ss_pred CCCCCHHHHHHHHHHHHHHCCCceEEEeeccc
Confidence 34444444677788888888999999999975
No 82
>d2g2ca1 c.57.1.1 (A:1-163) Putative molybdenum cofactor biosynthesis protein DIP0503 {Corynebacterium diphtheriae [TaxId: 1717]}
Probab=29.10 E-value=13 Score=22.91 Aligned_cols=47 Identities=15% Similarity=0.275 Sum_probs=26.5
Q ss_pred HHHHHHHHCCCcEEecC--CcchhHHHHHHHHHhhhCCCcEEEEcC-----CCCc
Q 034415 28 YLKASIKAMSIKVIEVP--GVEADDVIGKLAVRSVDDGFKIQVVSP-----NKDS 75 (95)
Q Consensus 28 ~i~~~l~~~gi~~~~~~--g~EADDvIatla~~~~~~~~~v~IvS~-----DkDl 75 (95)
++.+.+..+|+.+.... .-+.+.+..++.. +.+++..++|.|+ ++|+
T Consensus 30 ~L~~~l~~~G~~v~~~~iv~D~~~~i~~~~~~-a~~~~~DlVittGG~g~~~~D~ 83 (163)
T d2g2ca1 30 LMSDELQDYSYELISEVVVPEGYDTVVEAIAT-ALKQGARFIITAGGTGIRAKNQ 83 (163)
T ss_dssp HHCC----CEEEEEEEEEECSSHHHHHHHHHH-HHHTTCSEEEEESCCSSSTTCC
T ss_pred HHHHHHHhCCeEEEEEEeecchHHHHHHHHHh-hhccCCCEEEecCCCCCCCccc
Confidence 34455677888775533 3455555555544 4445789999884 6776
No 83
>d1em8a_ c.128.1.1 (A:) DNA polymerase III chi subunit {Escherichia coli [TaxId: 562]}
Probab=29.10 E-value=8.1 Score=23.83 Aligned_cols=29 Identities=10% Similarity=0.255 Sum_probs=17.4
Q ss_pred HHHHHHHHhhhCCCcEEEEcCCCCc-cccc
Q 034415 51 VIGKLAVRSVDDGFKIQVVSPNKDS-QILS 79 (95)
Q Consensus 51 vIatla~~~~~~~~~v~IvS~DkDl-QLv~ 79 (95)
.++-|+.++.+.|.+|+|++.|.+. +.++
T Consensus 24 ~~crL~~K~~~~g~ri~I~~~d~~~~~~lD 53 (147)
T d1em8a_ 24 LVCEIAAERWRSGKRVLIACEDEKQAYRLD 53 (147)
T ss_dssp HHHHHHHHHHHTTCCEEEECSSHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 3444555565667777777776665 5444
No 84
>d8abpa_ c.93.1.1 (A:) L-arabinose-binding protein {Escherichia coli [TaxId: 562]}
Probab=29.10 E-value=63 Score=20.27 Aligned_cols=52 Identities=12% Similarity=0.305 Sum_probs=30.9
Q ss_pred hHHhHHHHHHHHHHCCCcEEecCCcchhHHHHHHHHHhhhCCCc-EEEEcCCCC
Q 034415 22 MVQGLQYLKASIKAMSIKVIEVPGVEADDVIGKLAVRSVDDGFK-IQVVSPNKD 74 (95)
Q Consensus 22 l~~q~~~i~~~l~~~gi~~~~~~g~EADDvIatla~~~~~~~~~-v~IvS~DkD 74 (95)
+...+..+++.++..|+.++....-+++.-+..+-.... .+.. ++|.+.|.+
T Consensus 16 ~~~~~~g~~~aa~~~G~~~i~~~~~d~~~q~~~i~~li~-~~vDgiIi~~~~~~ 68 (305)
T d8abpa_ 16 FQTEWKFADKAGKDLGFEVIKIAVPDGEKTLNAIDSLAA-SGAKGFVICTPDPK 68 (305)
T ss_dssp HHHHHHHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHH-TTCCEEEEECSCGG
T ss_pred HHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHH-cCCCEEEEcccccc
Confidence 344566777788888888777666666665555444333 3333 444544544
No 85
>d1vhqa_ c.23.16.2 (A:) Putative sigma cross-reacting protein 27A (SCRP-27A, EllB) {Escherichia coli [TaxId: 562]}
Probab=29.04 E-value=36 Score=22.05 Aligned_cols=35 Identities=17% Similarity=0.349 Sum_probs=28.8
Q ss_pred CCcchhHHHHHHHHHhhhCCCcEEEEcCCCCc-cccc
Q 034415 44 PGVEADDVIGKLAVRSVDDGFKIQVVSPNKDS-QILS 79 (95)
Q Consensus 44 ~g~EADDvIatla~~~~~~~~~v~IvS~DkDl-QLv~ 79 (95)
+|+|--.++.++-. ..+.|++|.++|.|.+- +.++
T Consensus 15 DG~E~~E~~~~~~~-L~raG~~v~~~sp~~~~~~~~~ 50 (217)
T d1vhqa_ 15 DGSEIHEAVLTLLA-ISRSGAQAVCFAPDKQQVDVIN 50 (217)
T ss_dssp TSBCHHHHHHHHHH-HHHTTCEEEEEECSSBCSCCBC
T ss_pred CchhHHHHHHHHHH-HHHCCCEEEEEecCCCccceec
Confidence 79999999888764 66679999999999887 6654
No 86
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=28.90 E-value=21 Score=23.60 Aligned_cols=60 Identities=22% Similarity=0.326 Sum_probs=37.6
Q ss_pred HHHHHHHHHHCCCcEEecC-----CcchhHHHHHHHHHhhhCCCcEEEEcCCCCc-ccccCCeEEEE
Q 034415 26 LQYLKASIKAMSIKVIEVP-----GVEADDVIGKLAVRSVDDGFKIQVVSPNKDS-QILSHSLCLLR 86 (95)
Q Consensus 26 ~~~i~~~l~~~gi~~~~~~-----g~EADDvIatla~~~~~~~~~v~IvS~DkDl-QLv~~~v~v~~ 86 (95)
+..++.++..-.+-.+..| -.....+...+ +...+.|..|+++|.|-+. .-++++|.++.
T Consensus 142 v~iA~al~~~p~illLDEPt~gLD~~~~~~i~~~i-~~~~~~g~tii~~tH~l~~~~~~~drv~vl~ 207 (238)
T d1vpla_ 142 LLIARALMVNPRLAILDEPTSGLDVLNAREVRKIL-KQASQEGLTILVSSHNMLEVEFLCDRIALIH 207 (238)
T ss_dssp HHHHHHHTTCCSEEEEESTTTTCCHHHHHHHHHHH-HHHHHTTCEEEEEECCHHHHTTTCSEEEEEE
T ss_pred HHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHH-HHHHhcCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 4445544444444444443 22344444433 4455678899999999999 88899998875
No 87
>d1itza1 c.36.1.10 (A:10-347) Transketolase (TK), PP module {Maize (Zea mays) [TaxId: 4577]}
Probab=28.15 E-value=62 Score=22.32 Aligned_cols=42 Identities=12% Similarity=0.066 Sum_probs=25.0
Q ss_pred HHHHHHHCCCcEEecCCc-c-hhHHHHHHHHHhhhCCCcEEEEc
Q 034415 29 LKASIKAMSIKVIEVPGV-E-ADDVIGKLAVRSVDDGFKIQVVS 70 (95)
Q Consensus 29 i~~~l~~~gi~~~~~~g~-E-ADDvIatla~~~~~~~~~v~IvS 70 (95)
+.+-++++|+.+++..|. . .+.+-..+.......+.+++|+.
T Consensus 205 ~~~k~~a~Gw~vi~v~~g~~~~~~i~~a~~~a~~~~~kPt~Iia 248 (338)
T d1itza1 205 VSTRFEALGWHTIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIKV 248 (338)
T ss_dssp HHHHHHHTTCEEEEESCTTTCHHHHHHHHHHHHHCCSSCEEEEE
T ss_pred HHHHHHhcCCeEEEeeCCchhHHHHHHHHHHHHHccCCCceeEe
Confidence 455688999999987653 3 34444444433333456666553
No 88
>d1h70a_ d.126.1.3 (A:) Dimethylarginine dimethylaminohydrolase DDAH {Pseudomonas aeruginosa [TaxId: 287]}
Probab=27.96 E-value=23 Score=22.75 Aligned_cols=28 Identities=7% Similarity=0.156 Sum_probs=23.4
Q ss_pred hhhHHhHHHHHHHHHHCCCcEEecCCcc
Q 034415 20 DTMVQGLQYLKASIKAMSIKVIEVPGVE 47 (95)
Q Consensus 20 ~~l~~q~~~i~~~l~~~gi~~~~~~g~E 47 (95)
+...+|+..+.++|+..|+.++..+.-+
T Consensus 30 ~~a~~e~~~l~~~L~~~Gv~V~~~~~~~ 57 (255)
T d1h70a_ 30 AKALEQHNAYIRALQTCDVDITLLPPDE 57 (255)
T ss_dssp HHHHHHHHHHHHHHTTSSCEEEEECCCT
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEeCCCC
Confidence 4567899999999999999999877643
No 89
>d1rrma_ e.22.1.2 (A:) Lactaldehyde reductase FucO {Escherichia coli [TaxId: 562]}
Probab=27.81 E-value=45 Score=22.86 Aligned_cols=44 Identities=11% Similarity=0.087 Sum_probs=32.0
Q ss_pred HHHHHHHHHHCCCcEEecCCcchh---HHHHHHHHHhhhCCCcEEEE
Q 034415 26 LQYLKASIKAMSIKVIEVPGVEAD---DVIGKLAVRSVDDGFKIQVV 69 (95)
Q Consensus 26 ~~~i~~~l~~~gi~~~~~~g~EAD---DvIatla~~~~~~~~~v~Iv 69 (95)
+..+.+.|+..|+.+....+.+++ +.|--++..+.+.+..++|-
T Consensus 47 ~~~v~~~L~~~gi~~~vf~~v~~~p~~~~v~~~~~~~~~~~~D~Iia 93 (385)
T d1rrma_ 47 VAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGLGVFQNSGADYLIA 93 (385)
T ss_dssp HHHHHHHHHHTTCEEEEECBCCSSCBHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHcCCeEEEEcCccCCCCHHHHHHHhhhhhccCCCEEEe
Confidence 577888888899998888887764 55555566666667777764
No 90
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=27.72 E-value=17 Score=24.38 Aligned_cols=41 Identities=10% Similarity=0.209 Sum_probs=31.0
Q ss_pred cchhHHHHHHHHHhhhCCCcEEEEcCCCCc-ccccCCeEEEE
Q 034415 46 VEADDVIGKLAVRSVDDGFKIQVVSPNKDS-QILSHSLCLLR 86 (95)
Q Consensus 46 ~EADDvIatla~~~~~~~~~v~IvS~DkDl-QLv~~~v~v~~ 86 (95)
.-+.+++..+.....+.|..|+++|.|-+. .-++++|-++.
T Consensus 174 ~~~~~i~~~l~~l~~~~g~tvi~vTHdl~~~~~~~dri~vl~ 215 (240)
T d3dhwc1 174 ATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVIS 215 (240)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEBSCHHHHHHHCSEEEEEE
T ss_pred HHhhHHHHHHHHHHhccCCEEEEEcCCHHHHHHhCCEEEEEE
Confidence 345666666666556568999999999999 77888887774
No 91
>d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=27.47 E-value=18 Score=25.18 Aligned_cols=15 Identities=27% Similarity=0.359 Sum_probs=13.5
Q ss_pred hCCCcEEEEcCCCCc
Q 034415 61 DDGFKIQVVSPNKDS 75 (95)
Q Consensus 61 ~~~~~v~IvS~DkDl 75 (95)
..+.+|+|+|+|.|+
T Consensus 325 ~~~irVLIysGd~D~ 339 (421)
T d1wpxa1 325 NQDLPILVYAGDKDF 339 (421)
T ss_dssp HTTCCEEEEEETTCS
T ss_pred hcCCeEEEEeCCcCc
Confidence 458899999999998
No 92
>d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]}
Probab=26.87 E-value=11 Score=27.09 Aligned_cols=15 Identities=27% Similarity=0.527 Sum_probs=13.3
Q ss_pred hCCCcEEEEcCCCCc
Q 034415 61 DDGFKIQVVSPNKDS 75 (95)
Q Consensus 61 ~~~~~v~IvS~DkDl 75 (95)
+.|.+|+|+++|.|+
T Consensus 370 ~~girVLIy~Gd~D~ 384 (483)
T d1ac5a_ 370 ESGIEIVLFNGDKDL 384 (483)
T ss_dssp HTTCEEEEEEETTCS
T ss_pred HCCCEEEEEECChhh
Confidence 457899999999997
No 93
>d1xrsb1 c.23.6.1 (B:102-261) D-lysine 5,6-aminomutase beta subunit KamE, C-terminal domain {Clostridium sticklandii [TaxId: 1511]}
Probab=26.82 E-value=41 Score=20.86 Aligned_cols=29 Identities=24% Similarity=0.037 Sum_probs=22.3
Q ss_pred HHHHCCCcEEecCCcchhHHHHHHHHHhh
Q 034415 32 SIKAMSIKVIEVPGVEADDVIGKLAVRSV 60 (95)
Q Consensus 32 ~l~~~gi~~~~~~g~EADDvIatla~~~~ 60 (95)
+++.+|..-+..+|..|.|++..+.....
T Consensus 128 ~a~~~GaD~~f~~g~~a~~~a~~l~~~l~ 156 (160)
T d1xrsb1 128 IAKELGYDAGFGPGRFADDVATFAVKTLN 156 (160)
T ss_dssp HHHTTTCSEEECTTCCHHHHHHHHHHHHH
T ss_pred HHHHcCCCEEcCCCCCHHHHHHHHHHHHH
Confidence 44567777777889999999888877654
No 94
>d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.64 E-value=20 Score=24.74 Aligned_cols=17 Identities=12% Similarity=0.198 Sum_probs=14.4
Q ss_pred hhhCCCcEEEEcCCCCc
Q 034415 59 SVDDGFKIQVVSPNKDS 75 (95)
Q Consensus 59 ~~~~~~~v~IvS~DkDl 75 (95)
..+.+.+|+|+++|.|+
T Consensus 357 L~~~~~rVliy~Gd~D~ 373 (452)
T d1ivya_ 357 LSSQKYQILLYNGDVDM 373 (452)
T ss_dssp HHHTCCEEEEEEETTCS
T ss_pred HHhCCCEEEEEeCCcce
Confidence 34568899999999998
No 95
>d1kwga3 c.23.16.5 (A:394-590) A4 beta-galactosidase middle domain {Thermus thermophilus [TaxId: 274]}
Probab=26.26 E-value=35 Score=21.73 Aligned_cols=30 Identities=13% Similarity=0.073 Sum_probs=19.9
Q ss_pred cchhHHHHHHHHHhhhCCCcEEEEcCCCCc
Q 034415 46 VEADDVIGKLAVRSVDDGFKIQVVSPNKDS 75 (95)
Q Consensus 46 ~EADDvIatla~~~~~~~~~v~IvS~DkDl 75 (95)
+-.-+.+..+=+.+.+.|..|.|+|.|.||
T Consensus 28 ~~y~~~~~~~Y~al~~~gv~vDiv~~~~dl 57 (197)
T d1kwga3 28 WSYLGLVYLFYSALRRLGLDVDVVPPGASL 57 (197)
T ss_dssp CCHHHHHHHHHHHHHTTTCCEEEECTTSCC
T ss_pred cCHHHHHHHHHHHHHHcCCceeecCCCCCc
Confidence 333444544445566678888888888887
No 96
>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}
Probab=25.97 E-value=36 Score=19.95 Aligned_cols=37 Identities=14% Similarity=0.083 Sum_probs=21.0
Q ss_pred HHHHHHHHHhhhCCCcEEEEcCCCC-----c-ccccCCeEEEE
Q 034415 50 DVIGKLAVRSVDDGFKIQVVSPNKD-----S-QILSHSLCLLR 86 (95)
Q Consensus 50 DvIatla~~~~~~~~~v~IvS~DkD-----l-QLv~~~v~v~~ 86 (95)
.+-..+++...+.|.+|+|+-.|.| . ++..+++.++.
T Consensus 13 ~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~ 55 (153)
T d1id1a_ 13 ILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIP 55 (153)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEE
Confidence 4445555566666777777766664 2 33345565553
No 97
>d1bvyf_ c.23.5.1 (F:) FMN-binding domain of the cytochrome P450bm-3 {Bacillus megaterium [TaxId: 1404]}
Probab=25.84 E-value=61 Score=19.35 Aligned_cols=44 Identities=18% Similarity=0.190 Sum_probs=22.5
Q ss_pred HHHHHHHHHhhhCCCcEEEEcCCCCc-ccccCCeEEEEeccCCcc
Q 034415 50 DVIGKLAVRSVDDGFKIQVVSPNKDS-QILSHSLCLLRIAPRGFE 93 (95)
Q Consensus 50 DvIatla~~~~~~~~~v~IvS~DkDl-QLv~~~v~v~~~~k~~~~ 93 (95)
.+.-.++..+...|..+.++..|.+. .+..+.+-++-.+-.+||
T Consensus 17 ~~A~~l~~~l~~~g~~~~v~~~~~~~~~~~~~~~i~~~stt~~G~ 61 (152)
T d1bvyf_ 17 GTARDLADIAMSKGFAPQVATLDSHAGNLPREGAVLIVTASYNGH 61 (152)
T ss_dssp HHHHHHHHHHHTTTCCCEEEEGGGSTTCCCSSSEEEEEECCBTTB
T ss_pred HHHHHHHHHHHhCCCCceeccchhhhhhhhhccceEEEeccccCC
Confidence 34444555555666666665555555 555554444433333443
No 98
>d1auka_ c.76.1.2 (A:) Arylsulfatase A {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.81 E-value=21 Score=24.64 Aligned_cols=29 Identities=21% Similarity=0.386 Sum_probs=24.2
Q ss_pred chhHHHHHHHHHhhhCCC---cEEEEcCCCCc
Q 034415 47 EADDVIGKLAVRSVDDGF---KIQVVSPNKDS 75 (95)
Q Consensus 47 EADDvIatla~~~~~~~~---~v~IvS~DkDl 75 (95)
+.|+.||.+-....+.|. .++|+|+|...
T Consensus 235 ~~D~~iG~il~~Lk~~gl~dnTiIIftSDHG~ 266 (485)
T d1auka_ 235 ELDAAVGTLMTAIGDLGLLEETLVIFTADNGP 266 (485)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGEEEEEEESSCC
T ss_pred HhhhhcccHHHHHHHcCCccCeEEEEeeCCcc
Confidence 479999999988887764 69999999985
No 99
>d1m7ja3 c.1.9.11 (A:62-419) N-acyl-D-aminoacid amidohydrolase, catalytic domain {Alcaligenes faecalis [TaxId: 511]}
Probab=25.64 E-value=25 Score=24.34 Aligned_cols=56 Identities=14% Similarity=0.189 Sum_probs=37.6
Q ss_pred CCCCCChhhHHhHHHHHHHHHH--CCCcE--EecCCcchh--HHHHHHHHHhhhCCCcEEEEc
Q 034415 14 NRPPTPDTMVQGLQYLKASIKA--MSIKV--IEVPGVEAD--DVIGKLAVRSVDDGFKIQVVS 70 (95)
Q Consensus 14 nR~~~p~~l~~q~~~i~~~l~~--~gi~~--~~~~g~EAD--DvIatla~~~~~~~~~v~IvS 70 (95)
+|+++++++...-..+.+.+++ +||.. .-.|+.-|+ .+++ |++...+.|..+....
T Consensus 99 ~~~at~~ei~~M~~ll~eal~~GA~G~Stgl~y~P~~~A~~~El~~-lak~~~~~g~~~~~h~ 160 (358)
T d1m7ja3 99 RREATADEIQAMQALADDALASGAIGISTGAFYPPAAHASTEEIIE-VCRPLITHGGVYATHM 160 (358)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHHTCCEEEEETTSGGGTTCCHHHHHH-HHTHHHHHTCEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHHHhcCCcccccCCcccccccCCHHHHHH-HHHHHHhcCCeeeeee
Confidence 6888999998888889999986 66653 335676554 5554 6666666554444443
No 100
>d2bona1 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]}
Probab=25.53 E-value=67 Score=20.75 Aligned_cols=52 Identities=8% Similarity=0.005 Sum_probs=29.8
Q ss_pred HHHHHHHHHHCCCcEEecCCcchhHHHHHHHHHhhhCCC-cEEEEcCCCCc-ccc
Q 034415 26 LQYLKASIKAMSIKVIEVPGVEADDVIGKLAVRSVDDGF-KIQVVSPNKDS-QIL 78 (95)
Q Consensus 26 ~~~i~~~l~~~gi~~~~~~g~EADDvIatla~~~~~~~~-~v~IvS~DkDl-QLv 78 (95)
+..+.++|++.|+.+-...--.+.|... +++.+...++ -|+++.+|-=+ ..+
T Consensus 17 ~~~~~~~l~~~g~~~~v~~T~~~g~a~~-~~~~~~~~~~d~Ivv~GGDGTv~ev~ 70 (295)
T d2bona1 17 LREAIMLLREEGMTIHVRVTWEKGDAAR-YVEEARKFGVATVIAGGGDGTINEVS 70 (295)
T ss_dssp HHHHHHHHHTTTCCEEEEECCSTTHHHH-HHHHHHHHTCSEEEEEESHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEEcCCcchHHH-HHHHHHhcCCCEEEEECCCcHHHHHH
Confidence 3456677888899874333333344433 3444444444 57778889765 444
No 101
>d1qcza_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Escherichia coli [TaxId: 562]}
Probab=25.09 E-value=77 Score=19.92 Aligned_cols=46 Identities=11% Similarity=0.254 Sum_probs=33.0
Q ss_pred hHHHHHHHHHHCCCcE--EecCCcchhHHHHHHHHHhhhCCCcEEEEc
Q 034415 25 GLQYLKASIKAMSIKV--IEVPGVEADDVIGKLAVRSVDDGFKIQVVS 70 (95)
Q Consensus 25 q~~~i~~~l~~~gi~~--~~~~g~EADDvIatla~~~~~~~~~v~IvS 70 (95)
-...+.+.|+.+||++ .....+-.=+-+..+++.+.++|.+|+|.-
T Consensus 16 ~~~~a~~~L~~~gI~~e~~v~SAHRtp~~l~~~~~~~~~~~~~ViIa~ 63 (163)
T d1qcza_ 16 TMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAG 63 (163)
T ss_dssp HHHHHHHHHHHHTCCEEEEECCTTTCHHHHHHHHHHTTTTTCSEEEEE
T ss_pred HHHHHHHHHHHcCCCeEEEEeccccCHHHHHHHHHHHHHcCCeEEEEe
Confidence 3566777888888884 334566666777777877887888888853
No 102
>d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=24.42 E-value=59 Score=22.95 Aligned_cols=60 Identities=18% Similarity=0.209 Sum_probs=30.3
Q ss_pred CCCCChhh-HHhHHHHHHHHHHCCCcEEecCCcchhHHHHHHHHHhhhCCCcEEEEcCCCCc
Q 034415 15 RPPTPDTM-VQGLQYLKASIKAMSIKVIEVPGVEADDVIGKLAVRSVDDGFKIQVVSPNKDS 75 (95)
Q Consensus 15 R~~~p~~l-~~q~~~i~~~l~~~gi~~~~~~g~EADDvIatla~~~~~~~~~v~IvS~DkDl 75 (95)
|.|+|..= -+++..+.+.++. |-......|.-.----..+|..+.+.+.+++||+.|..-
T Consensus 5 ~~~~p~~dqp~aI~~l~~~L~~-g~~~~~L~GlsgS~ka~~~A~l~~~~~rp~LvVt~~~~~ 65 (408)
T d1c4oa1 5 RGPSPKGDQPKAIAGLVEALRD-GERFVTLLGATGTGKTVTMAKVIEALGRPALVLAPNKIL 65 (408)
T ss_dssp CSCCCCTTHHHHHHHHHHHHHT-TCSEEEEEECTTSCHHHHHHHHHHHHTCCEEEEESSHHH
T ss_pred cCCCCCCCCHHHHHHHHHHHhc-CCCcEEEecCCCCHHHHHHHHHHHHhCCCEEEEeCCHHH
Confidence 66677532 2235555555553 444334444433322222333333345589999988644
No 103
>d1sg1x2 g.24.1.1 (X:57-95) Low affinity neurotrophin receptor p75NTR {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=24.29 E-value=14 Score=18.43 Aligned_cols=17 Identities=35% Similarity=0.724 Sum_probs=14.2
Q ss_pred CCCcEEecCCcchhHHH
Q 034415 36 MSIKVIEVPGVEADDVI 52 (95)
Q Consensus 36 ~gi~~~~~~g~EADDvI 52 (95)
.|+.....|-.||||..
T Consensus 6 ~gl~~M~aPC~esdDA~ 22 (39)
T d1sg1x2 6 LGLQSMSAPCVEADDAV 22 (39)
T ss_dssp CTTEEEEECCBTTBCCE
T ss_pred hhhhhccCCcccCCCce
Confidence 57888899999999953
No 104
>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=24.28 E-value=29 Score=19.80 Aligned_cols=21 Identities=29% Similarity=0.203 Sum_probs=14.2
Q ss_pred HHHHHHHHhhhCCCcEEEEcCC
Q 034415 51 VIGKLAVRSVDDGFKIQVVSPN 72 (95)
Q Consensus 51 vIatla~~~~~~~~~v~IvS~D 72 (95)
++..+ +...+.|++|+|+|+=
T Consensus 41 v~~~l-~~l~~~G~~Iii~T~R 61 (149)
T d1ltqa1 41 VVELS-KMYALMGYQIVVVSGR 61 (149)
T ss_dssp HHHHH-HHHHHTTCEEEEEECS
T ss_pred HHHHH-HHHHhccCeEEEEecC
Confidence 44433 3455679999999973
No 105
>d1zesa1 c.23.1.1 (A:3-123) PhoB receiver domain {Escherichia coli [TaxId: 562]}
Probab=24.26 E-value=59 Score=18.29 Aligned_cols=50 Identities=12% Similarity=0.213 Sum_probs=27.8
Q ss_pred HHHHHHHHHHCCCcEEec------------------------CCcchhHHHHHHHHHhhhCCCcEEEEcCCCCc
Q 034415 26 LQYLKASIKAMSIKVIEV------------------------PGVEADDVIGKLAVRSVDDGFKIQVVSPNKDS 75 (95)
Q Consensus 26 ~~~i~~~l~~~gi~~~~~------------------------~g~EADDvIatla~~~~~~~~~v~IvS~DkDl 75 (95)
...+..+|+..|+.+... |+..+-+++..+-........+|+++|+-.+.
T Consensus 13 ~~~l~~~L~~~g~~v~~a~~~~~al~~l~~~~~dlil~D~~mp~~~G~~l~~~lr~~~~~~~~pvi~lt~~~~~ 86 (121)
T d1zesa1 13 REMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEE 86 (121)
T ss_dssp HHHHHHHHHHTTCEEEEECSHHHHHHHSSSSCCSEEEECSSCTTSCHHHHHHHHHHSTTTTTSCEEEEESCCSH
T ss_pred HHHHHHHHHHCCCEEEEECChHHHHHHHHccCCCEEEeecCCCCCCHHHHHHHHHhCccCCCCeEEEEECCCCH
Confidence 344666666667665543 55555555555443333345677777765444
No 106
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=24.24 E-value=27 Score=23.13 Aligned_cols=40 Identities=10% Similarity=0.037 Sum_probs=30.6
Q ss_pred chhHHHHHHHHHhhhCCCcEEEEcCCCCc-ccccCCeEEEE
Q 034415 47 EADDVIGKLAVRSVDDGFKIQVVSPNKDS-QILSHSLCLLR 86 (95)
Q Consensus 47 EADDvIatla~~~~~~~~~v~IvS~DkDl-QLv~~~v~v~~ 86 (95)
.+.++...+.....+.|..|+++|.|-+. .-+++++-+++
T Consensus 165 ~~~~i~~~l~~l~~~~g~tii~vTHd~~~a~~~~dri~vm~ 205 (232)
T d2awna2 165 LRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLD 205 (232)
T ss_dssp HHHHHHHHHHHHHHHSCCEEEEEESCHHHHHHHCSEEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 34566666666556678899999999988 88888888775
No 107
>d1p6qa_ c.23.1.1 (A:) CheY protein {Sinorhizobium meliloti, CheY2 [TaxId: 382]}
Probab=22.91 E-value=66 Score=18.34 Aligned_cols=15 Identities=13% Similarity=0.264 Sum_probs=10.2
Q ss_pred hHHHHHHHHHHCCCc
Q 034415 25 GLQYLKASIKAMSIK 39 (95)
Q Consensus 25 q~~~i~~~l~~~gi~ 39 (95)
+...++++|+..|+.
T Consensus 18 ~~~~l~~~L~~~g~~ 32 (129)
T d1p6qa_ 18 SRLLLGDALQQLGFK 32 (129)
T ss_dssp HHHHHHHHHHTTTCS
T ss_pred HHHHHHHHHHHCCCe
Confidence 345577777777875
No 108
>d2o8ia1 a.288.1.1 (A:1-165) Hypothetical protein Atu2327 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=22.90 E-value=44 Score=20.73 Aligned_cols=37 Identities=16% Similarity=0.362 Sum_probs=27.1
Q ss_pred HhHHHHHHH-HHHCCCc-EEecCCcchhHHHHHHHHHhh
Q 034415 24 QGLQYLKAS-IKAMSIK-VIEVPGVEADDVIGKLAVRSV 60 (95)
Q Consensus 24 ~q~~~i~~~-l~~~gi~-~~~~~g~EADDvIatla~~~~ 60 (95)
..|..++.. -+.+|++ ++.+.|.-+++|++.+-.+..
T Consensus 98 ~~l~~lN~~Y~~kFGfpFIi~v~g~~~~~Il~~l~~Rl~ 136 (165)
T d2o8ia1 98 ARFTQLNSAYTEKFGFPFIIAVKGLNRHDILSAFDTRID 136 (165)
T ss_dssp HHHHHHHHHHHHHHSSCCCCCCTTCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCeeEEeeCCCCHHHHHHHHHHHHc
Confidence 344444443 4569999 666789999999999988764
No 109
>d1vr3a1 b.82.1.6 (A:1-179) Acireductone dioxygenase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.75 E-value=47 Score=21.39 Aligned_cols=47 Identities=9% Similarity=0.145 Sum_probs=30.8
Q ss_pred HHHHCCCcEEec--CCcchhHHHHHHHHHhhhCCCcEEEEcCCC--Cc-ccc
Q 034415 32 SIKAMSIKVIEV--PGVEADDVIGKLAVRSVDDGFKIQVVSPNK--DS-QIL 78 (95)
Q Consensus 32 ~l~~~gi~~~~~--~g~EADDvIatla~~~~~~~~~v~IvS~Dk--Dl-QLv 78 (95)
.|..+|+..... +++|-|.-|-.+.+.-......++-+|.|+ ++ .++
T Consensus 30 ~L~~lGV~y~~~~~~~~~~~~~l~~l~~ergY~~~D~i~l~p~~~pn~~~~~ 81 (179)
T d1vr3a1 30 QLRTLGVLYWKLDADKYENDPELEKIRKMRNYSWMDIITICKDTLPNYEEKI 81 (179)
T ss_dssp HHHHTTCEEEECCGGGTTSCHHHHHHHHHHTCCEEEEEEESTTTSTTHHHHH
T ss_pred HHHhhCCEEEEecCccccccHHHHHHHHhcCCCceEEEEECCccCCCHHHHH
Confidence 356789986665 467777777777655433334678888886 55 554
No 110
>d1bwda_ d.126.1.2 (A:) L-arginine: inosamine-phosphate amidinotransferase {Streptomyces griseus [TaxId: 1911]}
Probab=22.68 E-value=35 Score=22.26 Aligned_cols=28 Identities=14% Similarity=0.166 Sum_probs=22.6
Q ss_pred hhHHhHHHHHHHHHHCCCcEEecCCcch
Q 034415 21 TMVQGLQYLKASIKAMSIKVIEVPGVEA 48 (95)
Q Consensus 21 ~l~~q~~~i~~~l~~~gi~~~~~~g~EA 48 (95)
+..+++..+.++|+..|+.+++.+....
T Consensus 60 ea~ed~~~l~~~Le~~GV~V~rp~~~~~ 87 (348)
T d1bwda_ 60 ETEEELHVLAAELTKLGVTVRRPGPRDH 87 (348)
T ss_dssp HHHHHHHHHHHHHHHTTCEEECCCCCCS
T ss_pred HHHHHHHHHHHHHHHcCceEEecccccc
Confidence 3567889999999999999998765443
No 111
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=22.61 E-value=75 Score=20.27 Aligned_cols=44 Identities=23% Similarity=0.237 Sum_probs=26.1
Q ss_pred HHHHHHHHHHCCCcEEecC-CcchhHHHHHHHHHhhhCCCcEEEE
Q 034415 26 LQYLKASIKAMSIKVIEVP-GVEADDVIGKLAVRSVDDGFKIQVV 69 (95)
Q Consensus 26 ~~~i~~~l~~~gi~~~~~~-g~EADDvIatla~~~~~~~~~v~Iv 69 (95)
.+.++.+.+.+|++++..+ +.+...++.-........++.++++
T Consensus 50 ~eQL~~~a~~l~i~~~~~~~~~d~~~~~~~~~~~~~~~~~d~ilI 94 (207)
T d1okkd2 50 GTQLSEWGKRLSIPVIQGPEGTDPAALAYDAVQAMKARGYDLLFV 94 (207)
T ss_dssp HHHHHHHHHHHTCCEECCCTTCCHHHHHHHHHHHHHHHTCSEEEE
T ss_pred hhhHhhcccccCceEEeccCCccHHHHHHHHHHHHHHCCCCEEEc
Confidence 4456667778899987654 4455555543333334446677775
No 112
>d1ojxa_ c.1.10.1 (A:) Archaeal fructose 1,6-bisphosphate aldolase {Archaeon Thermoproteus tenax [TaxId: 2271]}
Probab=22.33 E-value=79 Score=20.52 Aligned_cols=47 Identities=13% Similarity=0.174 Sum_probs=31.6
Q ss_pred hhHHhHHHHHHHHHHCCCcEEecC--------CcchhHHHHHHHHHhhhCCCcEE
Q 034415 21 TMVQGLQYLKASIKAMSIKVIEVP--------GVEADDVIGKLAVRSVDDGFKIQ 67 (95)
Q Consensus 21 ~l~~q~~~i~~~l~~~gi~~~~~~--------g~EADDvIatla~~~~~~~~~v~ 67 (95)
+..+++..+.+-++..|++++..+ +-...|+|+..++.+.+-|..++
T Consensus 120 ~~l~~~~~v~~e~~~~glP~v~e~~p~g~~~~~~~~~~~v~~aaria~ElGaDiv 174 (251)
T d1ojxa_ 120 KMFEELARIKRDAVKFDLPLVVWSYPRGGKVVNETAPEIVAYAARIALELGADAM 174 (251)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHHHHHHcCCeEEEEEeecCCccccCCCHHHHHHHHHHHHHhCCCEE
Confidence 345556667777788999976432 22245789988888877776655
No 113
>d1eo1a_ c.55.5.1 (A:) Hypothetical protein MTH1175 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=21.83 E-value=49 Score=18.88 Aligned_cols=27 Identities=11% Similarity=0.310 Sum_probs=18.5
Q ss_pred HHHHHHCCCcEEecCCcchhHHHHHHH
Q 034415 30 KASIKAMSIKVIEVPGVEADDVIGKLA 56 (95)
Q Consensus 30 ~~~l~~~gi~~~~~~g~EADDvIatla 56 (95)
...|...||.++...+-..+|+|..+.
T Consensus 79 ~~~L~~~GI~v~~~~~~~v~eal~~~~ 105 (124)
T d1eo1a_ 79 FEVLNELGIKIYRATGTSVEENLKLFT 105 (124)
T ss_dssp HHHHHHHTCEEEECCSCCHHHHHHHHH
T ss_pred HHHHHHCCCEEEEcCCCCHHHHHHHHH
Confidence 456667788888766556777777654
No 114
>d1jr2a_ c.113.1.1 (A:) Uroporphyrinogen III synthase (U3S, HemD) {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.61 E-value=59 Score=20.48 Aligned_cols=45 Identities=7% Similarity=0.081 Sum_probs=32.9
Q ss_pred HHHHHHHCCCcEEecCCcchhHHHHHHHHHhhhCCCcEEEEcCCCC
Q 034415 29 LKASIKAMSIKVIEVPGVEADDVIGKLAVRSVDDGFKIQVVSPNKD 74 (95)
Q Consensus 29 i~~~l~~~gi~~~~~~g~EADDvIatla~~~~~~~~~v~IvS~DkD 74 (95)
-.+.++.+|+.....+..-|.+++..+.... ..+.++++..++..
T Consensus 103 Ta~~l~~~G~~~~~~~~~~s~~l~~~~~~~~-~~~~~il~~~g~~~ 147 (260)
T d1jr2a_ 103 TASLVSKIGLDTEGETCGNAEKLAEYICSRE-SSALPLLFPCGNLK 147 (260)
T ss_dssp HHHHHHHTTCCCSCCSCSSHHHHHHHHHTSC-CCSSCEEEEESCGG
T ss_pred HHHHHHHcCCCccccccccHHHHHHHHhhhc-ccCceEEEeecccc
Confidence 3566788999987777788889888776543 34568888887644
No 115
>d1o13a_ c.55.5.1 (A:) Hypothetical protein TM1816 {Thermotoga maritima [TaxId: 2336]}
Probab=21.31 E-value=64 Score=17.75 Aligned_cols=27 Identities=26% Similarity=0.400 Sum_probs=16.1
Q ss_pred HHHHHHHCCCcEEecCCcchhHHHHHH
Q 034415 29 LKASIKAMSIKVIEVPGVEADDVIGKL 55 (95)
Q Consensus 29 i~~~l~~~gi~~~~~~g~EADDvIatl 55 (95)
....|...||.++...+-..+++|..+
T Consensus 77 a~~~L~~~GI~v~~~~~g~v~eal~~~ 103 (107)
T d1o13a_ 77 AIAAFEAMGVKVIKGASGTVEEVVNQY 103 (107)
T ss_dssp HHHHHHHTTCEEECSCCSBHHHHHHHH
T ss_pred HHHHHHHCCCEEEEcCCCCHHHHHHHH
Confidence 445566677777765544566665443
No 116
>d1owla2 c.28.1.1 (A:3-204) DNA photolyase {Synechococcus elongatus [TaxId: 32046]}
Probab=21.31 E-value=88 Score=19.22 Aligned_cols=50 Identities=14% Similarity=0.127 Sum_probs=33.9
Q ss_pred hHHhHHHHHHHHHHCCCcEEecCCcchhHHHHHHHHHhhhCCCcEEEEcCCCCc
Q 034415 22 MVQGLQYLKASIKAMSIKVIEVPGVEADDVIGKLAVRSVDDGFKIQVVSPNKDS 75 (95)
Q Consensus 22 l~~q~~~i~~~l~~~gi~~~~~~g~EADDvIatla~~~~~~~~~v~IvS~DkDl 75 (95)
+.+-+..+++-|..+|+..+...|-.. +++..+++ +.+...+.++.|-+.
T Consensus 53 l~~sL~~L~~~L~~~g~~L~i~~G~~~-~~l~~l~~---~~~i~~v~~~~~~~~ 102 (202)
T d1owla2 53 LQGCLQELQQRYQQAGSRLLLLQGDPQ-HLIPQLAQ---QLQAEAVYWNQDIEP 102 (202)
T ss_dssp HHHHHHHHHHHHHHHTSCEEEEESCHH-HHHHHHHH---HTTCSEEEEECCCSH
T ss_pred HHHHHHHHHHhhhccccceEEEEeeee-ccchhhcc---ccccceeEEeeeccc
Confidence 455677788888889999888777333 44444443 445677888877763
No 117
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=21.05 E-value=25 Score=23.44 Aligned_cols=40 Identities=3% Similarity=-0.012 Sum_probs=30.5
Q ss_pred chhHHHHHHHHHhhhCCCcEEEEcCCCCc-ccccCCeEEEE
Q 034415 47 EADDVIGKLAVRSVDDGFKIQVVSPNKDS-QILSHSLCLLR 86 (95)
Q Consensus 47 EADDvIatla~~~~~~~~~v~IvS~DkDl-QLv~~~v~v~~ 86 (95)
.+..+...+.+...+.|..|+++|.|-+. .-+++++-+++
T Consensus 171 ~~~~i~~ll~~l~~~~g~tii~vTHd~~~a~~~~dri~vm~ 211 (239)
T d1v43a3 171 LRVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMN 211 (239)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEEEESCHHHHHHHCSEEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEE
Confidence 45556555555455568899999999999 88889888875
No 118
>d1qkka_ c.23.1.1 (A:) Transcriptional regulatory protein DctD, receiver domain {Sinorhizobium meliloti [TaxId: 382]}
Probab=20.88 E-value=76 Score=18.34 Aligned_cols=31 Identities=19% Similarity=0.378 Sum_probs=20.8
Q ss_pred cCCcchhHHHHHHHHHhhhCCCcEEEEcCCCCc
Q 034415 43 VPGVEADDVIGKLAVRSVDDGFKIQVVSPNKDS 75 (95)
Q Consensus 43 ~~g~EADDvIatla~~~~~~~~~v~IvS~DkDl 75 (95)
+|+..+-+++..+-.. ..+.+|+++|+..|.
T Consensus 54 mP~~~G~el~~~lr~~--~~~~pvI~lT~~~~~ 84 (140)
T d1qkka_ 54 MPGMDGLALFRKILAL--DPDLPMILVTGHGDI 84 (140)
T ss_dssp CSSSCHHHHHHHHHHH--CTTSCEEEEECGGGH
T ss_pred cCCCCHHHHHHHHHHh--CCCCcEEEEECCCCH
Confidence 3566666666665443 346789999987777
No 119
>d1ka9h_ c.23.16.1 (H:) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Thermus thermophilus [TaxId: 274]}
Probab=20.83 E-value=46 Score=19.72 Aligned_cols=24 Identities=21% Similarity=0.246 Sum_probs=17.4
Q ss_pred HHHHHHHhhhCCCcEEEEcCCCCc
Q 034415 52 IGKLAVRSVDDGFKIQVVSPNKDS 75 (95)
Q Consensus 52 Iatla~~~~~~~~~v~IvS~DkDl 75 (95)
+.++++...+-|..+.|++..+|+
T Consensus 13 ~~si~~~l~~lg~~~~i~~~~~~i 36 (195)
T d1ka9h_ 13 LRSAAKALEAAGFSVAVAQDPKAH 36 (195)
T ss_dssp HHHHHHHHHHTTCEEEEESSTTSC
T ss_pred HHHHHHHHHHCCCeEEEECCHHHH
Confidence 456677777778888888766666
No 120
>d1jida_ d.201.1.1 (A:) SRP19 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.79 E-value=54 Score=19.41 Aligned_cols=39 Identities=21% Similarity=0.319 Sum_probs=24.2
Q ss_pred cccChhhhcCCCCC------Chh---hHHhHHHHHHHHHHCCCcEEec
Q 034415 5 HTLYPSYKNNRPPT------PDT---MVQGLQYLKASIKAMSIKVIEV 43 (95)
Q Consensus 5 ~~l~p~YKanR~~~------p~~---l~~q~~~i~~~l~~~gi~~~~~ 43 (95)
.-+||.|=-.+... |-+ -...+..|.++|..+|++++..
T Consensus 12 ~iIyP~Y~Ds~~tr~eGRRv~k~~aV~~P~~~EI~~a~~~lgl~~~~E 59 (114)
T d1jida_ 12 ICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNVFLE 59 (114)
T ss_dssp EEECGGGGBTTSCTTTTCCSCTTTCBSSCCHHHHHHHHHHTTCCEEEE
T ss_pred EEECCccccCCCChhhcCccCHHHhccCCCHHHHHHHHHHcCCCEEEe
Confidence 34788885444322 211 1234677888899999998744
No 121
>d1o2da_ e.22.1.2 (A:) Alcohol dehydrogenase TM0920 {Thermotoga maritima [TaxId: 2336]}
Probab=20.50 E-value=68 Score=21.75 Aligned_cols=44 Identities=27% Similarity=0.277 Sum_probs=28.7
Q ss_pred hHHHHHHHHHHCCCcEEecCCcchh---HHHHHHHHHhhhCCCcEEE
Q 034415 25 GLQYLKASIKAMSIKVIEVPGVEAD---DVIGKLAVRSVDDGFKIQV 68 (95)
Q Consensus 25 q~~~i~~~l~~~gi~~~~~~g~EAD---DvIatla~~~~~~~~~v~I 68 (95)
.++.+++.|+..|+.+...++.+.+ +.+-.++..+.+.+..++|
T Consensus 45 ~~~~v~~~L~~~~i~~~~f~~v~~~p~~~~v~~~~~~~~~~~~D~II 91 (359)
T d1o2da_ 45 SLDDLKKLLDETEISYEIFDEVEENPSFDNVMKAVERYRNDSFDFVV 91 (359)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECSSCBHHHHHHHHHHHTTSCCSEEE
T ss_pred HHHHHHHHHHHcCCeEEEEcCccCCCCHHHHHHhhhhccccCCceEE
Confidence 3577888888889887766666543 3444445556666666665
No 122
>d2ihta3 c.36.1.9 (A:375-572) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]}
Probab=20.49 E-value=94 Score=19.25 Aligned_cols=45 Identities=13% Similarity=0.059 Sum_probs=32.1
Q ss_pred HHHHHHHCCCcEEecCCcchhHHHHHHHHHhhhCCCcEEEEcCCCCc
Q 034415 29 LKASIKAMSIKVIEVPGVEADDVIGKLAVRSVDDGFKIQVVSPNKDS 75 (95)
Q Consensus 29 i~~~l~~~gi~~~~~~g~EADDvIatla~~~~~~~~~v~IvS~DkDl 75 (95)
+..+.+++|+..+.+.. -||+-.+|.+.....+--++-|-.|+|+
T Consensus 145 ~~~lA~a~G~~~~~v~~--~~el~~al~~a~~~~~p~lIeV~vd~d~ 189 (198)
T d2ihta3 145 FVALAEANGVDATRATN--REELLAALRKGAELGRPFLIEVPVNYDF 189 (198)
T ss_dssp HHHHHHHTTCEEEECCS--HHHHHHHHHHHHTSSSCEEEEEEBCCCC
T ss_pred hhhhccccCceEEEeCC--HHHHHHHHHHHHhCCCCEEEEEEcCCCC
Confidence 45577889999988875 5788888877655444445556668885
No 123
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal domain {Ureaplasma urealyticum [TaxId: 2130]}
Probab=20.44 E-value=41 Score=20.17 Aligned_cols=38 Identities=29% Similarity=0.345 Sum_probs=26.2
Q ss_pred CcEEecCCc-chhHHHHHHHHHhhhCCCcEEEEcCCCCc
Q 034415 38 IKVIEVPGV-EADDVIGKLAVRSVDDGFKIQVVSPNKDS 75 (95)
Q Consensus 38 i~~~~~~g~-EADDvIatla~~~~~~~~~v~IvS~DkDl 75 (95)
+.++..+.. =-+|.+..++......|.+|++..=|.|+
T Consensus 80 ~dvI~IDE~QFf~d~i~~~~~~~~~~g~~Viv~GLd~Df 118 (139)
T d2b8ta1 80 TKVIGIDEVQFFDDRICEVANILAENGFVVIISGLDKNF 118 (139)
T ss_dssp CCEEEECSGGGSCTHHHHHHHHHHHTTCEEEEECCSBCT
T ss_pred cCEEEechhhhcchhHHHHHHHHHhcCceEEEEEecccc
Confidence 456655421 11356666777777788999999999999
No 124
>d1uqwa_ c.94.1.1 (A:) Hypothetical protein YliB {Escherichia coli [TaxId: 562]}
Probab=20.34 E-value=80 Score=21.15 Aligned_cols=49 Identities=14% Similarity=0.038 Sum_probs=35.2
Q ss_pred HHHHHHHHHHCCCc-------EEecCCcchhHHHHHHHHHhhhCCCcEEEEcCCCC
Q 034415 26 LQYLKASIKAMSIK-------VIEVPGVEADDVIGKLAVRSVDDGFKIQVVSPNKD 74 (95)
Q Consensus 26 ~~~i~~~l~~~gi~-------~~~~~g~EADDvIatla~~~~~~~~~v~IvS~DkD 74 (95)
....+++++..|++ ....+.-....+...++....+-|++|.+.+.|.+
T Consensus 306 ~~~Ak~ll~~ag~~~g~~~~~~~~~~~~~~~~~a~~i~~~l~~~Gi~v~~~~~~~~ 361 (487)
T d1uqwa_ 306 PVKARELLKEAGYPNGFSTTLWSSHNHSTAQKVLQFTQQQLAQVGIKAQVTAMDAG 361 (487)
T ss_dssp HHHHHHHHHHHTCTTCEEEEEEEECCSSSHHHHHHHHHHHHHHTTEEEEEEEECHH
T ss_pred HHHHHHHHHhcccccccccccccccccchhHHHHHHHHHHHhhccceeEEEEecHH
Confidence 45577888888875 33345566667777777778888999998877755
No 125
>d1jqga2 d.58.3.1 (A:4P-100P) Procarboxypeptidase A {Cotton bollworm (Helicoverpa armigera) [TaxId: 29058]}
Probab=20.30 E-value=25 Score=19.53 Aligned_cols=37 Identities=8% Similarity=0.127 Sum_probs=24.5
Q ss_pred cccChhhhcCCCCCChhhHHhHHHHHHHHHHCCCcEEec
Q 034415 5 HTLYPSYKNNRPPTPDTMVQGLQYLKASIKAMSIKVIEV 43 (95)
Q Consensus 5 ~~l~p~YKanR~~~p~~l~~q~~~i~~~l~~~gi~~~~~ 43 (95)
|+-|..||-=|-. |+. ..|+..|+.+-..+++..+..
T Consensus 1 ~~~YdgykV~rv~-~~~-~~q~~~L~~le~~~~~dfW~~ 37 (92)
T d1jqga2 1 HEIYDGHAVYQVD-VAS-MDQVKLVHDFENDLMLDVWSD 37 (92)
T ss_dssp CCTTTTCEEEEEE-CCS-HHHHHHHHHHHHHTTCEEEEC
T ss_pred CCcccCCEEEEEE-cCC-HHHHHHHHHHHhccCCcEecC
Confidence 4557777777753 322 256788888878888876654
No 126
>d1to3a_ c.1.10.1 (A:) Putative aldolase YihT {Salmonella typhimurium [TaxId: 90371]}
Probab=20.11 E-value=1.1e+02 Score=20.13 Aligned_cols=46 Identities=11% Similarity=0.047 Sum_probs=28.6
Q ss_pred HHhHHHHHHHHHHCCCcEEec---------CCcchhHHHHHHHHHhhhCCCcEEE
Q 034415 23 VQGLQYLKASIKAMSIKVIEV---------PGVEADDVIGKLAVRSVDDGFKIQV 68 (95)
Q Consensus 23 ~~q~~~i~~~l~~~gi~~~~~---------~g~EADDvIatla~~~~~~~~~v~I 68 (95)
..++..+.+.|+..|++.+.. ++...++.|+..++.+.+-|..++-
T Consensus 139 ~~~~~~l~~~c~~~glp~llE~l~~~~~~~~~~~~~~~i~~a~r~~~e~GaDi~K 193 (291)
T d1to3a_ 139 LNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGADLYK 193 (291)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSCSEEE
T ss_pred HHHHHHHHHHHHHcCCcceEEEEecCCCcccccchHHHHHHHHHHHHhcCCcEEE
Confidence 344566667778888886552 2334456777777777666665543
Done!