BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034421
(95 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZUN5|TET2_ARATH Tetraspanin-2 OS=Arabidopsis thaliana GN=TET2 PE=2 SV=1
Length = 270
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 75/126 (59%), Gaps = 34/126 (26%)
Query: 1 MCAELNQSYTMAQDFFNAHDITPLQ----------------------------------W 26
+C +LNQ + A FF++ ITPLQ W
Sbjct: 143 VCPKLNQEFITADQFFSSSKITPLQSGCCKPPTACGYNFVNPTLWLNPTNMAADADCYLW 202
Query: 27 GNDQMQLCYNCDSCKAGLLANLKKEWRRVDIILIVTLVALILVYLIGCCAFRNDKTEDLF 86
NDQ QLCYNC+SCKAGLL NL+KEWR+ ++ILI+T+V LI VY+I C AFRN +TEDLF
Sbjct: 203 SNDQSQLCYNCNSCKAGLLGNLRKEWRKANLILIITVVVLIWVYVIACSAFRNAQTEDLF 262
Query: 87 RKYKQG 92
RKYKQG
Sbjct: 263 RKYKQG 268
>sp|Q9FIQ5|TRN2_ARATH Protein TORNADO 2 OS=Arabidopsis thaliana GN=TRN2 PE=1 SV=1
Length = 269
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/125 (50%), Positives = 76/125 (60%), Gaps = 33/125 (26%)
Query: 1 MCAELNQSYTMAQDFFNAH---------------------------------DITPLQWG 27
+C ELNQ YT+AQDFFNAH D+ L W
Sbjct: 143 ICPELNQRYTLAQDFFNAHLDPIQSGCCKPPTKCGFTFVNPTYWISPIDMSADMDCLNWS 202
Query: 28 NDQMQLCYNCDSCKAGLLANLKKEWRRVDIILIVTLVALILVYLIGCCAFRNDKTEDLFR 87
NDQ LCY CDSCKAGLLAN+K +W + DI L++ L+ LI+VY+IGCCAFRN +TED+FR
Sbjct: 203 NDQNTLCYTCDSCKAGLLANIKVDWLKADIFLLLALIGLIIVYIIGCCAFRNAETEDIFR 262
Query: 88 KYKQG 92
KYKQG
Sbjct: 263 KYKQG 267
>sp|Q9M0B7|TET9_ARATH Tetraspanin-9 OS=Arabidopsis thaliana GN=TET9 PE=2 SV=1
Length = 272
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%)
Query: 26 WGNDQMQLCYNCDSCKAGLLANLKKEWRRVDIILIVTLVALILVYLIGCCAFRNDKTEDL 85
W N++ +LCYNC +CKAG L NLK W+RV I+ I+ LV L++VY +GCCAFRN+K +
Sbjct: 204 WDNEKHKLCYNCKACKAGFLDNLKAAWKRVAIVNIIFLVLLVVVYAMGCCAFRNNKEDRY 263
Query: 86 FRK 88
R
Sbjct: 264 GRS 266
>sp|Q8S8Q6|TET8_ARATH Tetraspanin-8 OS=Arabidopsis thaliana GN=TET8 PE=2 SV=1
Length = 273
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 48/63 (76%)
Query: 26 WGNDQMQLCYNCDSCKAGLLANLKKEWRRVDIILIVTLVALILVYLIGCCAFRNDKTEDL 85
W N + +LC++C SCKAGLL N+K W++V I+ IV LV LI+VY +GCCAFRN+K +D
Sbjct: 205 WDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNIVFLVFLIIVYSVGCCAFRNNKRDDS 264
Query: 86 FRK 88
+ +
Sbjct: 265 YSR 267
>sp|Q9M1E7|TET3_ARATH Tetraspanin-3 OS=Arabidopsis thaliana GN=TET3 PE=2 SV=1
Length = 285
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 42/61 (68%)
Query: 24 LQWGNDQMQLCYNCDSCKAGLLANLKKEWRRVDIILIVTLVALILVYLIGCCAFRNDKTE 83
+ W NDQ LCY C SCKAG+L +LKK WR+V +I IV L+ L++ Y+I A+RN K
Sbjct: 205 MVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVINIVVLIILVIFYVIAYAAYRNVKRI 264
Query: 84 D 84
D
Sbjct: 265 D 265
>sp|Q9SUD4|TET7_ARATH Tetraspanin-7 OS=Arabidopsis thaliana GN=TET7 PE=2 SV=1
Length = 263
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 42/59 (71%)
Query: 26 WGNDQMQLCYNCDSCKAGLLANLKKEWRRVDIILIVTLVALILVYLIGCCAFRNDKTED 84
W N LCY+C++CKAGLL N+K W++V + IV L+ LI+VY +GCCAFRN++
Sbjct: 204 WDNKPGTLCYDCEACKAGLLDNIKNSWKKVAKVNIVFLIFLIIVYSVGCCAFRNNRKRS 262
>sp|Q9LPR6|TET11_ARATH Tetraspanin-11 OS=Arabidopsis thaliana GN=TET11 PE=2 SV=1
Length = 271
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 43/57 (75%)
Query: 26 WGNDQMQLCYNCDSCKAGLLANLKKEWRRVDIILIVTLVALILVYLIGCCAFRNDKT 82
W N Q +LC+NC++CKAG+LAN++++WR + + I L+ LI VY GCCA RN++T
Sbjct: 208 WSNVQTELCFNCNACKAGVLANIREKWRNLLVFNICLLILLITVYSCGCCARRNNRT 264
>sp|Q84WF6|TET5_ARATH Tetraspanin-5 OS=Arabidopsis thaliana GN=TET5 PE=2 SV=1
Length = 281
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 25 QWGNDQMQLCYNCDSCKAGLLANLKKEWRRVDIILIVTLVALILVYLIGCCAFRNDKTED 84
+W N LCY+CD+C+AG+L ++++W ++ ++ ++ ++ LI VY +GCCAF+N K
Sbjct: 190 RWNNAATVLCYDCDTCRAGVLETVRRDWHKLSLVNVIVVIFLIAVYCVGCCAFKNAKRPQ 249
Query: 85 LFRKYKQGTY 94
+ + G Y
Sbjct: 250 HY-GFPYGRY 258
>sp|Q9C7C1|TET6_ARATH Tetraspanin-6 OS=Arabidopsis thaliana GN=TET6 PE=2 SV=1
Length = 282
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 39/58 (67%)
Query: 24 LQWGNDQMQLCYNCDSCKAGLLANLKKEWRRVDIILIVTLVALILVYLIGCCAFRNDK 81
+W N LCY CD+CKAG+L ++ +WR++ ++ I+ LV LI VY GCCAF N +
Sbjct: 188 FRWNNGVEMLCYECDACKAGVLEEIRLDWRKLSVVNILVLVLLIAVYAAGCCAFHNTR 245
>sp|Q9FN51|TET12_ARATH Tetraspanin-12 OS=Arabidopsis thaliana GN=TET12 PE=2 SV=1
Length = 264
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 38/58 (65%)
Query: 26 WGNDQMQLCYNCDSCKAGLLANLKKEWRRVDIILIVTLVALILVYLIGCCAFRNDKTE 83
W N Q QLCY C+SCK G+L ++K WR + ++ ++ ++ ++ +Y GCC +N++
Sbjct: 201 WSNTQRQLCYACESCKIGVLKGIRKRWRILIVVNLLLILLVVFLYSCGCCVRKNNRVP 258
>sp|Q9LSS4|TET4_ARATH Tetraspanin-4 OS=Arabidopsis thaliana GN=TET4 PE=3 SV=1
Length = 327
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 42/58 (72%)
Query: 24 LQWGNDQMQLCYNCDSCKAGLLANLKKEWRRVDIILIVTLVALILVYLIGCCAFRNDK 81
+ W NDQ LCY C SCKAG+L +LKK WR+V +I IV ++ L++ Y+I C A++N K
Sbjct: 205 MLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVINIVVVIILVIFYVIACAAYQNVK 262
>sp|Q1PDI1|TET15_ARATH Tetraspanin-15 OS=Arabidopsis thaliana GN=TET15 PE=2 SV=1
Length = 317
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 32/47 (68%)
Query: 26 WGNDQMQLCYNCDSCKAGLLANLKKEWRRVDIILIVTLVALILVYLI 72
W ND LCY+C SCK G + +++++W ++ I LIV + L++ +L+
Sbjct: 259 WRNDWSILCYDCRSCKFGFIRSVRRKWWQLGIFLIVISILLLMSHLL 305
>sp|F4I214|TET10_ARATH Tetraspanin-10 OS=Arabidopsis thaliana GN=TET10 PE=2 SV=1
Length = 284
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 23/34 (67%)
Query: 34 CYNCDSCKAGLLANLKKEWRRVDIILIVTLVALI 67
CYNCDSCKAG+ +K EWR V I +V V LI
Sbjct: 211 CYNCDSCKAGVAQYMKTEWRLVAIFNVVLFVVLI 244
>sp|Q9SI56|TET13_ARATH Tetraspanin-13 OS=Arabidopsis thaliana GN=TET13 PE=3 SV=1
Length = 278
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 4 ELNQSYTMAQDFFNAHDITPLQWGNDQMQLCYNCDSCKAGLLANLKKEWRRVDIILIVTL 63
E ++T+++ ++N ++ +W N LC++CDSCKA ++A++ + V +
Sbjct: 198 EKPNNWTVSR-YYNNLEVDCKRWNNSADTLCFDCDSCKAVIIADVHN----TSFSITVNI 252
Query: 64 VALILVYLIG 73
+ +I IG
Sbjct: 253 IHIIFSLCIG 262
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.139 0.453
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,306,952
Number of Sequences: 539616
Number of extensions: 1091354
Number of successful extensions: 2980
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2959
Number of HSP's gapped (non-prelim): 22
length of query: 95
length of database: 191,569,459
effective HSP length: 65
effective length of query: 30
effective length of database: 156,494,419
effective search space: 4694832570
effective search space used: 4694832570
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)