Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>034422
MATLKKIPSVLMGCGGVGRQLLQHIVSCRSLHANLGVHLRVVGVSDSKSLVVASDVFTKE
FNDNLLSEICRLKAGHSSLSTLIGGFGGNPLILYC

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034422
        (95 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2178998 - symbol:AT5G21060 species:3702 "Arabi...   282  9.7e-25   1


>TAIR|locus:2178998 [details] [associations]
            symbol:AT5G21060 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004412
            "homoserine dehydrogenase activity" evidence=IEA;ISS] [GO:0006520
            "cellular amino acid metabolic process" evidence=IEA] [GO:0008652
            "cellular amino acid biosynthetic process" evidence=ISS]
            [GO:0009067 "aspartate family amino acid biosynthetic process"
            evidence=ISS] [GO:0055114 "oxidation-reduction process"
            evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
            InterPro:IPR001342 InterPro:IPR019811 InterPro:IPR022697
            Pfam:PF00742 PIRSF:PIRSF036497 PROSITE:PS01042 UniPathway:UPA00050
            InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688 GO:GO:0000166
            Gene3D:3.40.50.720 UniPathway:UPA00051 GO:GO:0004412 GO:GO:0009088
            GO:GO:0009086 GO:GO:0009097 UniGene:At.20914 IPI:IPI00657345
            RefSeq:NP_001031916.1 UniGene:At.66690 ProteinModelPortal:F4K6Y8
            SMR:F4K6Y8 PRIDE:F4K6Y8 EnsemblPlants:AT5G21060.2 GeneID:832230
            KEGG:ath:AT5G21060 Uniprot:F4K6Y8
        Length = 378

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 54/79 (68%), Positives = 64/79 (81%)

Query:     4 LKKIPSVLMGCGGVGRQLLQHIVSCRSLHANLGVHLRVVGVSDSKSLVVASDVFTKEFND 63
             +KKIP +LMGCGGVGR LLQHIVSCRSLHA +GVH+RV+GV DSKSLV   DV  +E ND
Sbjct:     1 MKKIPVLLMGCGGVGRHLLQHIVSCRSLHAKMGVHIRVIGVCDSKSLVAPMDVLKEELND 60

Query:    64 NLLSEICRLKAGHSSLSTL 82
              LLSE+C +K+  S+LS L
Sbjct:    61 ELLSEVCLIKSTGSALSKL 79


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.140   0.414    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       95        95   0.00091  102 3  11 22  0.47    29
                                                     29  0.43    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  504 (54 KB)
  Total size of DFA:  95 KB (2069 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.41u 0.18s 11.59t   Elapsed:  00:00:00
  Total cpu time:  11.41u 0.18s 11.59t   Elapsed:  00:00:00
  Start:  Mon May 20 16:27:54 2013   End:  Mon May 20 16:27:54 2013

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