BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034424
MASSCHRFIRRSSLSSIKSAFRSNAPKSPTAASAPFPLPTKSSPSPLRRFSLSRSPSELG
CAQSLLPLHSVVAAARMTSCLSAASKSCRALSQGT

High Scoring Gene Products

Symbol, full name Information P value
AT4G17310 protein from Arabidopsis thaliana 6.7e-17
AT5G47455 protein from Arabidopsis thaliana 2.6e-15
NOXY2
AT5G11630
protein from Arabidopsis thaliana 1.3e-06
AT2G15000 protein from Arabidopsis thaliana 0.00017
AT4G39300 protein from Arabidopsis thaliana 0.00021
AT1G55205 protein from Arabidopsis thaliana 0.00027
AT3G13674 protein from Arabidopsis thaliana 0.00072
AT4G34265 protein from Arabidopsis thaliana 0.00093

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034424
        (95 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2130819 - symbol:AT4G17310 species:3702 "Arabi...   208  6.7e-17   1
TAIR|locus:505006678 - symbol:AT5G47455 "AT5G47455" speci...   193  2.6e-15   1
TAIR|locus:2181925 - symbol:NOXY2 "AT5G11630" species:370...   111  1.3e-06   1
TAIR|locus:2055787 - symbol:AT2G15000 "AT2G15000" species...    91  0.00017   1
TAIR|locus:2136363 - symbol:AT4G39300 "AT4G39300" species...    90  0.00021   1
TAIR|locus:4010713552 - symbol:AT1G55205 "AT1G55205" spec...    89  0.00027   1
TAIR|locus:2091596 - symbol:AT3G13674 "AT3G13674" species...    85  0.00072   1
TAIR|locus:505006558 - symbol:AT4G34265 "AT4G34265" speci...    84  0.00093   1


>TAIR|locus:2130819 [details] [associations]
            symbol:AT4G17310 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM] EMBL:CP002687
            UniGene:At.26556 EMBL:AY050862 EMBL:BT010622 EMBL:AK175517
            IPI:IPI00546833 RefSeq:NP_193463.1 EnsemblPlants:AT4G17310.1
            GeneID:827444 KEGG:ath:AT4G17310 TAIR:At4g17310 InParanoid:Q949V8
            OMA:CRRFISK PhylomeDB:Q949V8 ProtClustDB:CLSN2680468
            Genevestigator:Q949V8 Uniprot:Q949V8
        Length = 99

 Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
 Identities = 47/95 (49%), Positives = 58/95 (61%)

Query:     1 MASSCHRFIRRSSLSSIKSAFRSNAPKSPTAASAPFPLPTKXXXXXXXXXXXXXXXXXXG 60
             MAS+C +   R+S+SS+KS  RS    +  A+SA F LP++                  G
Sbjct:     1 MASACRKLFNRASVSSLKSTLRSTTGSTSAASSAGFRLPSQPTRHFSFSRCPSEL----G 56

Query:    61 CAQSLLPLHSVVAAARMTSCLSAASKSCRALSQGT 95
             C QSLLPLHS VAAAR+TSCLS  S+S RALSQGT
Sbjct:    57 CVQSLLPLHSTVAAARLTSCLSTTSRSSRALSQGT 91


>TAIR|locus:505006678 [details] [associations]
            symbol:AT5G47455 "AT5G47455" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM;IDA] [GO:0005886 "plasma membrane"
            evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
            GO:GO:0005739 EMBL:CP002688 UniGene:At.66689 IPI:IPI00533845
            RefSeq:NP_568683.2 EnsemblPlants:AT5G47455.4 GeneID:834795
            KEGG:ath:AT5G47455 OMA:RNSPIGT Uniprot:F4JX57
        Length = 116

 Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
 Identities = 51/98 (52%), Positives = 59/98 (60%)

Query:     7 RFIRRSSLSSIKSAFRS---NAP----KSPTAAS-APFPLPTKXXXXXXXXXXXXXXXXX 58
             RF+ RSS+SS KSA RS   N+P     SP AAS A F +P+K                 
Sbjct:     4 RFMSRSSVSSFKSAIRSSFRNSPIGTGSSPAAASSAGFRIPSKPAASPLPRFSFSRCPSE 63

Query:    59 XGCAQSLLPLHSVVAAARMTSCLSAASKSCRALSQ-GT 95
              GC QSLLPLHS VAAAR+TSCLS  S+S RAL+Q GT
Sbjct:    64 LGCVQSLLPLHSTVAAARLTSCLSTTSRSSRALTQDGT 101


>TAIR|locus:2181925 [details] [associations]
            symbol:NOXY2 "AT5G11630" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0042742
            "defense response to bacterium" evidence=IMP] [GO:0005739
            "mitochondrion" evidence=IDA] [GO:0048364 "root development"
            evidence=IMP] [GO:0050832 "defense response to fungus"
            evidence=IMP] [GO:0071433 "cell wall repair" evidence=IMP]
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0042742 EMBL:AL163814
            HOGENOM:HOG000237694 IPI:IPI00543806 PIR:T48522 RefSeq:NP_196724.3
            UniGene:At.32230 UniGene:At.49008 STRING:Q9LYG7
            EnsemblPlants:AT5G11630.1 GeneID:831035 KEGG:ath:AT5G11630
            TAIR:At5g11630 InParanoid:Q9LYG7 OMA:LCSANPG PhylomeDB:Q9LYG7
            ProtClustDB:CLSN2699113 Genevestigator:Q9LYG7 Uniprot:Q9LYG7
        Length = 93

 Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 35/95 (36%), Positives = 50/95 (52%)

Query:     1 MASSCHRFIRRSSLSSIKSAFRSNAPK-SPTAASAPFPLPTKXXXXXXXXXXXXXXXXXX 59
             MAS C R + + + S+ +SA   N P   P +AS+   +P                    
Sbjct:     1 MASRC-RSLSKPAFSAFRSAM--NKPSIRPKSASSFIGVPPSPGFSRPIGQL-------- 49

Query:    60 GCAQSLLPLHSVVAAARMTSCLSAASKSCRALSQG 94
             G  QSLLPL+S VA+AR+TSCL   S++ R+L+QG
Sbjct:    50 GSLQSLLPLYSAVASARLTSCLGIDSQNSRSLAQG 84


>TAIR|locus:2055787 [details] [associations]
            symbol:AT2G15000 "AT2G15000" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
            process" evidence=RCA] EMBL:CP002685 EMBL:AC005957 IPI:IPI00846837
            RefSeq:NP_001077892.1 RefSeq:NP_001077893.1 UniGene:At.40475
            STRING:A8MR87 EnsemblPlants:AT2G15000.4 EnsemblPlants:AT2G15000.5
            GeneID:815989 KEGG:ath:AT2G15000 TAIR:At2g15000 eggNOG:NOG243935
            HOGENOM:HOG000237694 OMA:MAWRNAG PhylomeDB:A8MR87
            ProtClustDB:CLSN2688123 Genevestigator:A8MR87 Uniprot:A8MR87
        Length = 101

 Score = 91 (37.1 bits), Expect = 0.00017, P = 0.00017
 Identities = 26/82 (31%), Positives = 38/82 (46%)

Query:    15 SSIKSAFRSNAPKSPTAASAPF-PLPTKXXXXXXXXXXXXXXXXXXGCAQSLLPLHSVVA 73
             S + +  RS + +SPT A     P  +                   GC QS LPL+SVVA
Sbjct:    12 SFVSATARSPSLRSPTTALPRLRPPQSSLPSRRFTFSSPSRNLGALGCTQSFLPLYSVVA 71

Query:    74 AARMTSCLSAASKSCRALSQGT 95
              +++TS L+   ++   LS GT
Sbjct:    72 TSQLTSHLNVNLRAFCELSNGT 93


>TAIR|locus:2136363 [details] [associations]
            symbol:AT4G39300 "AT4G39300" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002687 EMBL:AL161595
            EMBL:AL050351 HOGENOM:HOG000237694 EMBL:AY088247 EMBL:BT004680
            EMBL:AK117138 EMBL:AK176792 EMBL:AK176869 EMBL:AK176902
            IPI:IPI00528987 PIR:T08578 RefSeq:NP_568056.1 UniGene:At.31102
            STRING:Q9T036 EnsemblPlants:AT4G39300.1 GeneID:830086
            KEGG:ath:AT4G39300 TAIR:At4g39300 eggNOG:NOG241281
            InParanoid:Q9T036 OMA:FCRSALM PhylomeDB:Q9T036
            ProtClustDB:CLSN2689835 Genevestigator:Q9T036 Uniprot:Q9T036
        Length = 96

 Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
 Identities = 30/98 (30%), Positives = 43/98 (43%)

Query:     1 MASSCHRFIRRSSLSSIKSAFRSNAPKS----PTAASAPFPLPTKXXXXXXXXXXXXXXX 56
             MAS C   +   S + + S  R+   KS    PT  S+PF                    
Sbjct:     1 MASFCRSALMAGSRNLV-SRSRTVTQKSLNLKPTTTSSPF------ASMSQSIPRASRVL 53

Query:    57 XXXGCAQSLLPLHSVVAAARMTSCLSAASKSCRALSQG 94
                G  ++++PLHS VA+AR+ S ++A S     LSQG
Sbjct:    54 SALGSVETMIPLHSAVASARLRSSIAADSSCWSLLSQG 91


>TAIR|locus:4010713552 [details] [associations]
            symbol:AT1G55205 "AT1G55205" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002684 EMBL:AC027034
            HOGENOM:HOG000237694 IPI:IPI00891930 RefSeq:NP_001117497.1
            UniGene:At.49462 UniGene:At.69368 EnsemblPlants:AT1G55205.2
            GeneID:5007805 KEGG:ath:AT1G55205 TAIR:At1g55205 OMA:SVESKSW
            PhylomeDB:B3H4H0 ProtClustDB:CLSN2699057 Genevestigator:B3H4H0
            Uniprot:B3H4H0
        Length = 103

 Score = 89 (36.4 bits), Expect = 0.00027, P = 0.00027
 Identities = 30/95 (31%), Positives = 42/95 (44%)

Query:     1 MASSCHRFIRRSSLSSIKSAFRSNAPKSPTAASAPFPLPTKXXXXXXXXXXXXXXX-XXX 59
             MASS  +  R SS   I S  +  +  +   +S P P+ +                    
Sbjct:     1 MASSS-KICRLSS--KIHSLTQKLSKTNVHISSLPSPIKSSSPSSATSRINQSFRLPVEL 57

Query:    60 GCAQSLLPLHSVVAAARMTSCLSAASKSCRALSQG 94
              C  S+LPLHS +A+AR+ S LS  SKS   + QG
Sbjct:    58 SCCLSMLPLHSAIASARLISSLSVESKSWGLVPQG 92


>TAIR|locus:2091596 [details] [associations]
            symbol:AT3G13674 "AT3G13674" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009664 "plant-type cell wall
            organization" evidence=RCA] [GO:0042545 "cell wall modification"
            evidence=RCA] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AP001307
            HOGENOM:HOG000237694 ProtClustDB:CLSN2699057 IPI:IPI00540592
            RefSeq:NP_187979.2 UniGene:At.39372 EnsemblPlants:AT3G13674.1
            GeneID:820574 KEGG:ath:AT3G13674 TAIR:At3g13674 eggNOG:NOG311709
            OMA:SMIPLHS PhylomeDB:Q3EB68 Genevestigator:Q3EB68 Uniprot:Q3EB68
        Length = 95

 Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
 Identities = 28/94 (29%), Positives = 45/94 (47%)

Query:     1 MASSCHRFIRRSSLSSIKSAFRSNAPKSPTAASAPFPLPTKXXXXXXXXXXXXXXXXXXG 60
             MASS  R + R S S +KS  ++ + K+   +S P P+ +                    
Sbjct:     1 MASS--RVLGRFS-SRLKSLCQNLSNKNANVSSLPSPIKSASPSSATSCRLNRSSRLPVE 57

Query:    61 CAQSLLPLHSVVAAARMTSCLSAASKSCRALSQG 94
              + S++PLHS +A++R+ S LS  SK    + QG
Sbjct:    58 LS-SMIPLHSAIASSRLVSSLSVESKIWGLVPQG 90


>TAIR|locus:505006558 [details] [associations]
            symbol:AT4G34265 "AT4G34265" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002687 HOGENOM:HOG000237694
            ProtClustDB:CLSN2688123 EMBL:AY086804 EMBL:BT004935 EMBL:AK118797
            EMBL:AK175209 EMBL:AK175277 EMBL:AK175290 EMBL:AK175532
            EMBL:AK175706 EMBL:AK175886 EMBL:AK176172 EMBL:AK176282
            EMBL:AK176497 EMBL:AK176537 EMBL:AK176565 EMBL:AK176658
            EMBL:AK176803 IPI:IPI00548379 RefSeq:NP_567963.3 UniGene:At.25513
            UniGene:At.75113 EnsemblPlants:AT4G34265.1 GeneID:829576
            KEGG:ath:AT4G34265 TAIR:At4g34265 InParanoid:Q8LC44 OMA:FTNPRNL
            PhylomeDB:Q8LC44 Genevestigator:Q8LC44 Uniprot:Q8LC44
        Length = 94

 Score = 84 (34.6 bits), Expect = 0.00093, P = 0.00093
 Identities = 18/35 (51%), Positives = 25/35 (71%)

Query:    60 GCAQSLLPLHSVVAAARMTSCLSAASKSCRALSQG 94
             GC +S LPL++VVAAAR+TS L+   ++   LS G
Sbjct:    55 GCTESFLPLYNVVAAARLTSHLNVNLRAFCELSNG 89


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.120   0.346    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       95        77   0.00091  102 3  10 22  0.47    28
                                                     29  0.50    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  473 (50 KB)
  Total size of DFA:  100 KB (2073 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.81u 0.09s 11.90t   Elapsed:  00:00:01
  Total cpu time:  11.81u 0.09s 11.90t   Elapsed:  00:00:01
  Start:  Mon May 20 16:29:14 2013   End:  Mon May 20 16:29:15 2013

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