BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034431
(95 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q86A88|DYL_DICDI Dynein light chain, cytoplasmic OS=Dictyostelium discoideum
GN=dlcB PE=3 SV=1
Length = 91
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 48/86 (55%), Gaps = 11/86 (12%)
Query: 1 MPAHMQQHALRFTRSLVDDYYSESSAPKTSRPNPTHLARALKKEFDDAYGPAWHCVVGKS 60
MP MQQ A T ++ E +A +KKEFD Y P WHC+VGKS
Sbjct: 15 MPDFMQQDATECTIKAFEETNIERD-----------IAMIIKKEFDKKYSPTWHCIVGKS 63
Query: 61 FGSFVTHSPAGFLYFSIDSLSVLLFK 86
FGSFVTH F+YF+I+ SVLLFK
Sbjct: 64 FGSFVTHETKNFIYFNINKHSVLLFK 89
>sp|O02414|DYL1_HELCR Dynein light chain LC6, flagellar outer arm OS=Heliocidaris
crassispina PE=3 SV=1
Length = 89
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 11/87 (12%)
Query: 1 MPAHMQQHALRFTRSLVDDYYSESSAPKTSRPNPTHLARALKKEFDDAYGPAWHCVVGKS 60
MP MQQ A+ ++ + E +A +KKEFD Y P WHC+VG++
Sbjct: 13 MPEDMQQDAVDCATQALEKFNIEKD-----------IAAYIKKEFDKKYNPTWHCIVGRN 61
Query: 61 FGSFVTHSPAGFLYFSIDSLSVLLFKT 87
FGS+VTH F+YF + ++VLLFK+
Sbjct: 62 FGSYVTHETKHFIYFYLGQVAVLLFKS 88
>sp|O94111|DYL1_EMENI Dynein light chain, cytoplasmic OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=nudG PE=3 SV=1
Length = 94
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 11/88 (12%)
Query: 1 MPAHMQQHALRFTRSLVDDYYSESSAPKTSRPNPTHLARALKKEFDDAYGPAWHCVVGKS 60
M MQQ A+ ++ Y+ E +A+ +K+EFD G WHCVVG++
Sbjct: 18 MSEDMQQEAVEVAIEAMEKYHIEKD-----------IAQYIKREFDSRKGATWHCVVGRN 66
Query: 61 FGSFVTHSPAGFLYFSIDSLSVLLFKTE 88
FGSFVTH F+YF + ++LLFKT+
Sbjct: 67 FGSFVTHETKHFIYFYLGHCAILLFKTQ 94
>sp|Q24117|DYL1_DROME Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster
GN=ctp PE=1 SV=1
Length = 89
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 1 MPAHMQQHALRFTRSLVDDYYSESSAPKTSRPNPTHLARALKKEFDDAYGPAWHCVVGKS 60
M MQQ A+ ++ Y E +A +KKEFD Y P WHC+VG++
Sbjct: 13 MSEEMQQDAVDCATQALEKYNIEKD-----------IAAYIKKEFDKKYNPTWHCIVGRN 61
Query: 61 FGSFVTHSPAGFLYFSIDSLSVLLFKT 87
FGS+VTH F+YF + +++LLFK+
Sbjct: 62 FGSYVTHETRHFIYFYLGQVAILLFKS 88
>sp|Q78P75|DYL2_RAT Dynein light chain 2, cytoplasmic OS=Rattus norvegicus GN=Dynll2
PE=1 SV=1
Length = 89
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 1 MPAHMQQHALRFTRSLVDDYYSESSAPKTSRPNPTHLARALKKEFDDAYGPAWHCVVGKS 60
M MQQ A+ ++ Y E +A +KKEFD Y P WHC+VG++
Sbjct: 13 MSEDMQQDAVDCATQAMEKYNIEKD-----------IAAYIKKEFDKKYNPTWHCIVGRN 61
Query: 61 FGSFVTHSPAGFLYFSIDSLSVLLFKT 87
FGS+VTH F+YF + +++LLFK+
Sbjct: 62 FGSYVTHETKHFIYFYLGQVAILLFKS 88
>sp|Q9D0M5|DYL2_MOUSE Dynein light chain 2, cytoplasmic OS=Mus musculus GN=Dynll2 PE=1
SV=1
Length = 89
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 1 MPAHMQQHALRFTRSLVDDYYSESSAPKTSRPNPTHLARALKKEFDDAYGPAWHCVVGKS 60
M MQQ A+ ++ Y E +A +KKEFD Y P WHC+VG++
Sbjct: 13 MSEDMQQDAVDCATQAMEKYNIEKD-----------IAAYIKKEFDKKYNPTWHCIVGRN 61
Query: 61 FGSFVTHSPAGFLYFSIDSLSVLLFKT 87
FGS+VTH F+YF + +++LLFK+
Sbjct: 62 FGSYVTHETKHFIYFYLGQVAILLFKS 88
>sp|Q96FJ2|DYL2_HUMAN Dynein light chain 2, cytoplasmic OS=Homo sapiens GN=DYNLL2 PE=1
SV=1
Length = 89
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 1 MPAHMQQHALRFTRSLVDDYYSESSAPKTSRPNPTHLARALKKEFDDAYGPAWHCVVGKS 60
M MQQ A+ ++ Y E +A +KKEFD Y P WHC+VG++
Sbjct: 13 MSEDMQQDAVDCATQAMEKYNIEKD-----------IAAYIKKEFDKKYNPTWHCIVGRN 61
Query: 61 FGSFVTHSPAGFLYFSIDSLSVLLFKT 87
FGS+VTH F+YF + +++LLFK+
Sbjct: 62 FGSYVTHETKHFIYFYLGQVAILLFKS 88
>sp|Q3MHR3|DYL2_BOVIN Dynein light chain 2, cytoplasmic OS=Bos taurus GN=DYNLL2 PE=3
SV=1
Length = 89
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 1 MPAHMQQHALRFTRSLVDDYYSESSAPKTSRPNPTHLARALKKEFDDAYGPAWHCVVGKS 60
M MQQ A+ ++ Y E +A +KKEFD Y P WHC+VG++
Sbjct: 13 MSEDMQQDAVDCATQAMEKYNIEKD-----------IAAYIKKEFDKKYNPTWHCIVGRN 61
Query: 61 FGSFVTHSPAGFLYFSIDSLSVLLFKT 87
FGS+VTH F+YF + +++LLFK+
Sbjct: 62 FGSYVTHETKHFIYFYLGQVAILLFKS 88
>sp|P63170|DYL1_RAT Dynein light chain 1, cytoplasmic OS=Rattus norvegicus GN=Dynll1
PE=1 SV=1
Length = 89
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 1 MPAHMQQHALRFTRSLVDDYYSESSAPKTSRPNPTHLARALKKEFDDAYGPAWHCVVGKS 60
M MQQ ++ ++ Y E +A +KKEFD Y P WHC+VG++
Sbjct: 13 MSEEMQQDSVECATQALEKYNIEKD-----------IAAHIKKEFDKKYNPTWHCIVGRN 61
Query: 61 FGSFVTHSPAGFLYFSIDSLSVLLFKT 87
FGS+VTH F+YF + +++LLFK+
Sbjct: 62 FGSYVTHETKHFIYFYLGQVAILLFKS 88
>sp|P63169|DYL1_RABIT Dynein light chain 1, cytoplasmic OS=Oryctolagus cuniculus
GN=DYNLL1 PE=1 SV=1
Length = 89
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 1 MPAHMQQHALRFTRSLVDDYYSESSAPKTSRPNPTHLARALKKEFDDAYGPAWHCVVGKS 60
M MQQ ++ ++ Y E +A +KKEFD Y P WHC+VG++
Sbjct: 13 MSEEMQQDSVECATQALEKYNIEKD-----------IAAHIKKEFDKKYNPTWHCIVGRN 61
Query: 61 FGSFVTHSPAGFLYFSIDSLSVLLFKT 87
FGS+VTH F+YF + +++LLFK+
Sbjct: 62 FGSYVTHETKHFIYFYLGQVAILLFKS 88
>sp|P63168|DYL1_MOUSE Dynein light chain 1, cytoplasmic OS=Mus musculus GN=Dynll1 PE=1
SV=1
Length = 89
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 1 MPAHMQQHALRFTRSLVDDYYSESSAPKTSRPNPTHLARALKKEFDDAYGPAWHCVVGKS 60
M MQQ ++ ++ Y E +A +KKEFD Y P WHC+VG++
Sbjct: 13 MSEEMQQDSVECATQALEKYNIEKD-----------IAAHIKKEFDKKYNPTWHCIVGRN 61
Query: 61 FGSFVTHSPAGFLYFSIDSLSVLLFKT 87
FGS+VTH F+YF + +++LLFK+
Sbjct: 62 FGSYVTHETKHFIYFYLGQVAILLFKS 88
>sp|P61273|DYL1_MACFA Dynein light chain 1, cytoplasmic OS=Macaca fascicularis
GN=DYNLL1 PE=3 SV=1
Length = 89
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 1 MPAHMQQHALRFTRSLVDDYYSESSAPKTSRPNPTHLARALKKEFDDAYGPAWHCVVGKS 60
M MQQ ++ ++ Y E +A +KKEFD Y P WHC+VG++
Sbjct: 13 MSEEMQQDSVECATQALEKYNIEKD-----------IAAHIKKEFDKKYNPTWHCIVGRN 61
Query: 61 FGSFVTHSPAGFLYFSIDSLSVLLFKT 87
FGS+VTH F+YF + +++LLFK+
Sbjct: 62 FGSYVTHETKHFIYFYLGQVAILLFKS 88
>sp|P63167|DYL1_HUMAN Dynein light chain 1, cytoplasmic OS=Homo sapiens GN=DYNLL1 PE=1
SV=1
Length = 89
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 1 MPAHMQQHALRFTRSLVDDYYSESSAPKTSRPNPTHLARALKKEFDDAYGPAWHCVVGKS 60
M MQQ ++ ++ Y E +A +KKEFD Y P WHC+VG++
Sbjct: 13 MSEEMQQDSVECATQALEKYNIEKD-----------IAAHIKKEFDKKYNPTWHCIVGRN 61
Query: 61 FGSFVTHSPAGFLYFSIDSLSVLLFKT 87
FGS+VTH F+YF + +++LLFK+
Sbjct: 62 FGSYVTHETKHFIYFYLGQVAILLFKS 88
>sp|P61285|DYL1_BOVIN Dynein light chain 1, cytoplasmic OS=Bos taurus GN=DYNLL1 PE=1
SV=1
Length = 89
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 1 MPAHMQQHALRFTRSLVDDYYSESSAPKTSRPNPTHLARALKKEFDDAYGPAWHCVVGKS 60
M MQQ ++ ++ Y E +A +KKEFD Y P WHC+VG++
Sbjct: 13 MSEEMQQDSVECATQALEKYNIEKD-----------IAAHIKKEFDKKYNPTWHCIVGRN 61
Query: 61 FGSFVTHSPAGFLYFSIDSLSVLLFKT 87
FGS+VTH F+YF + +++LLFK+
Sbjct: 62 FGSYVTHETKHFIYFYLGQVAILLFKS 88
>sp|O96860|DYL2_DROME Dynein light chain 2, cytoplasmic OS=Drosophila melanogaster
GN=Cdlc2 PE=3 SV=1
Length = 89
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 1 MPAHMQQHALRFTRSLVDDYYSESSAPKTSRPNPTHLARALKKEFDDAYGPAWHCVVGKS 60
M MQQ A+ ++ Y E +A +KKEFD Y P WHC+VG++
Sbjct: 13 MSEEMQQDAVDCATQALEKYNIEKD-----------IAAFIKKEFDKKYNPTWHCIVGRN 61
Query: 61 FGSFVTHSPAGFLYFSIDSLSVLLFKT 87
FGS+VTH F+YF + +++LLFK+
Sbjct: 62 FGSYVTHETRHFIYFYLGQVAILLFKS 88
>sp|Q22799|DYL1_CAEEL Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans
GN=dlc-1 PE=1 SV=1
Length = 89
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 1 MPAHMQQHALRFTRSLVDDYYSESSAPKTSRPNPTHLARALKKEFDDAYGPAWHCVVGKS 60
M MQQ A+ ++ Y E +A +KKEFD Y P WHC+VG++
Sbjct: 13 MSDDMQQDAIDCATQALEKYNIEKD-----------IAAYIKKEFDKKYNPTWHCIVGRN 61
Query: 61 FGSFVTHSPAGFLYFSIDSLSVLLFKT 87
FGS+VTH F+YF + +++LLFK+
Sbjct: 62 FGSYVTHETKHFIYFYLGQVAILLFKS 88
>sp|Q94758|DYL1_SCHMA Dynein light chain OS=Schistosoma mansoni GN=DLC PE=1 SV=1
Length = 89
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 1 MPAHMQQHALRFTRSLVDDYYSESSAPKTSRPNPTHLARALKKEFDDAYGPAWHCVVGKS 60
M MQ+ A+ +D + E +A +KK+FD Y P WHC+VG+
Sbjct: 13 MSEEMQEDAIHIAAGAIDKHDLEKD-----------IAANIKKDFDRKYHPTWHCIVGRH 61
Query: 61 FGSFVTHSPAGFLYFSIDSLSVLLFKT 87
FGS+VTH F+YF +D + LLFK+
Sbjct: 62 FGSYVTHETHNFIYFYLDDRAFLLFKS 88
>sp|Q6BZF8|DYL1_DEBHA Dynein light chain 1, cytoplasmic OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=DYN2 PE=3 SV=1
Length = 91
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 1 MPAHMQQHALRFTRSLVDDYYSESSAPKTSRPNPTHLARALKKEFDDAYGPAWHCVVGKS 60
+P MQ + V +Y E +A LKKE D YG WH +VGKS
Sbjct: 15 LPEEMQTRIFELSNEAVSNYKIEKD-----------IATYLKKELDQLYGATWHVIVGKS 63
Query: 61 FGSFVTHSPAGFLYFSIDSLSVLLFKT 87
FGS+VTH F YF I L+ L+FK+
Sbjct: 64 FGSYVTHEQGFFTYFYIGQLAFLIFKS 90
>sp|Q94748|DYL2_SCHMA Probable dynein light chain OS=Schistosoma mansoni PE=3 SV=1
Length = 89
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 1 MPAHMQQHALRFTRSLVDDYYSESSAPKTSRPNPTHLARALKKEFDDAYGPAWHCVVGKS 60
M MQ+ A+ + +D Y E +A +KKEFD Y P WHC+VGK
Sbjct: 13 MHEDMQETAVHTAAAALDKYEIEKD-----------VAAYIKKEFDRKYNPNWHCIVGKH 61
Query: 61 FGSFVTHSPAGFLYFSIDSLSVLLFKT 87
FGS+VTH F+YF + + LLFK+
Sbjct: 62 FGSYVTHETQHFIYFYLQERAFLLFKS 88
>sp|Q39580|DYL1_CHLRE Dynein 8 kDa light chain, flagellar outer arm OS=Chlamydomonas
reinhardtii PE=1 SV=1
Length = 91
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 38/51 (74%)
Query: 37 LARALKKEFDDAYGPAWHCVVGKSFGSFVTHSPAGFLYFSIDSLSVLLFKT 87
+A +KKEFD + P WHC+VG++FGS+VTH F+YF + +++LLFK+
Sbjct: 40 IAAYIKKEFDRKHNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKS 90
>sp|Q9UR05|DYL1_SCHPO Dynein light chain 1, cytoplasmic OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dlc2 PE=3 SV=1
Length = 85
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 1 MPAHMQQHALRFTRSLVDDYYSESSAPKTSRPNPTHLARALKKEFDDAYGPAWHCVVGKS 60
M MQQ A+ ++ + E +A +K+EFD + P WHC+VG++
Sbjct: 9 MSEKMQQEAIHAAVQAMEKFTIEKD-----------IAAFIKREFDKKFSPTWHCIVGRN 57
Query: 61 FGSFVTHSPAGFLYFSIDSLSVLLFKT 87
FGSFVTH F+YF + +++ LLFK+
Sbjct: 58 FGSFVTHESRHFIYFYLGTVAFLLFKS 84
>sp|Q6FUJ0|DYL1_CANGA Dynein light chain 1, cytoplasmic OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DYN2 PE=3 SV=1
Length = 86
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 1 MPAHMQQHALRFTRSLVDDYYSESSAPKTSRPNPTHLARALKKEFDDAYGPAWHCVVGKS 60
M MQQ R + ++ E +A +KKE D YG WH +VG+S
Sbjct: 11 MGDEMQQEVFRIAEEAMREHTLERE-----------IASVIKKEMDSRYGHTWHVIVGRS 59
Query: 61 FGSFVTHSPAGFLYFSIDSLSVLLFKT 87
FGS+VTH F+YF + L++L+FKT
Sbjct: 60 FGSYVTHEKGKFVYFYVGPLALLVFKT 86
>sp|Q6CWX4|DYL1_KLULA Dynein light chain 1, cytoplasmic OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DYN2 PE=3 SV=1
Length = 87
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%)
Query: 13 TRSLVDDYYSESSAPKTSRPNPTHLARALKKEFDDAYGPAWHCVVGKSFGSFVTHSPAGF 72
T L D+ + SS + +A +KK+ D + G WH +VGK+FGS+VTH F
Sbjct: 12 TDELRDEIFELSSNATANYKLEREIAAYIKKQLDVSQGETWHVIVGKNFGSYVTHEKGYF 71
Query: 73 LYFSIDSLSVLLFKT 87
+YF I L+ L+FKT
Sbjct: 72 VYFYIGPLAFLVFKT 86
>sp|Q759T0|DYL1_ASHGO Dynein light chain 1, cytoplasmic OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DYN2
PE=3 SV=1
Length = 88
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 41/75 (54%)
Query: 13 TRSLVDDYYSESSAPKTSRPNPTHLARALKKEFDDAYGPAWHCVVGKSFGSFVTHSPAGF 72
T L D+ + S +A +KKE D +G WH +VGK+FGS+VTH F
Sbjct: 13 TDELRDEIFGISVQAVEQFQLEREVAAYIKKELDSKHGQTWHVIVGKNFGSYVTHEKGHF 72
Query: 73 LYFSIDSLSVLLFKT 87
+YF I L+ L+FKT
Sbjct: 73 IYFYIGPLAFLVFKT 87
>sp|Q02647|DYL1_YEAST Dynein light chain 1, cytoplasmic OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DYN2 PE=1 SV=1
Length = 92
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 11/83 (13%)
Query: 5 MQQHALRFTRSLVDDYYSESSAPKTSRPNPTHLARALKKEFDDAYGPAWHCVVGKSFGSF 64
+++ L ++ +D Y E +A +KK+ D YG WH +VGK+FGS+
Sbjct: 20 LKEDILTISKDALDKYQLERD-----------IAGTVKKQLDVKYGNTWHVIVGKNFGSY 68
Query: 65 VTHSPAGFLYFSIDSLSVLLFKT 87
VTH F+YF I L+ L+FKT
Sbjct: 69 VTHEKGHFVYFYIGPLAFLVFKT 91
>sp|Q39579|DYL2_CHLRE Dynein 11 kDa light chain, flagellar outer arm OS=Chlamydomonas
reinhardtii PE=1 SV=1
Length = 120
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 18/95 (18%)
Query: 1 MPAHMQQHALRFTRSLVDDYYSESSAPKTSRPNPTHLARALKKEFDDAY---GPA----W 53
MP +Q A++ VD Y +A +K E+D Y G A +
Sbjct: 28 MPESFEQDAVQIALIAVDKY-----------RQLKDIAFYIKHEYDKKYPGSGKATEGVY 76
Query: 54 HCVVGKSFGSFVTHSPAGFLYFSIDSLSVLLFKTE 88
HC+VGKSF S V+H F++ +D+ V+L+K++
Sbjct: 77 HCIVGKSFASAVSHETRQFIHMKVDTYHVILWKSK 111
>sp|Q21557|DYL2_CAEEL Probable dynein light chain 2, cytoplasmic OS=Caenorhabditis
elegans GN=dlc-2 PE=3 SV=2
Length = 90
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 37 LARALKKEFDDAYGPAWHCVVGKSFGSFVTHSPAGFLYFSIDSLSVLLFKT 87
+A +K+E D +G WH + GK FGS V++ F+ + ++V+++K
Sbjct: 38 VAAFVKEELDKKFGATWHVICGKCFGSRVSYEMGHFILLKCNKVNVMIYKC 88
>sp|Q9DCM4|DNAL4_MOUSE Dynein light chain 4, axonemal OS=Mus musculus GN=Dnal4 PE=2 SV=2
Length = 105
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Query: 1 MPAHMQQHALRFTRSLVDDYYSESSAPKTSRPNPTHLARALKKEFDDAYGPAWHCVVGKS 60
MP M+ + + + + + N A+ +K+ D +G +WH V+G+
Sbjct: 27 MPEEMRVETMELCVTACEKFSN----------NNESAAKMIKETMDKKFGSSWHVVIGEG 76
Query: 61 FGSFVTHSPAGFLYFSI-DSLSVLLFK 86
FG +TH LY +L+V ++K
Sbjct: 77 FGFEITHEVKNLLYLYFGGTLAVCVWK 103
>sp|A4F4L4|DNAL4_PIG Dynein light chain 4, axonemal OS=Sus scrofa GN=DNAL4 PE=3 SV=1
Length = 105
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Query: 1 MPAHMQQHALRFTRSLVDDYYSESSAPKTSRPNPTHLARALKKEFDDAYGPAWHCVVGKS 60
MP M+ + + + + + N A+ +K+ D +G +WH V+G+
Sbjct: 27 MPEEMRVETMELCVTACEKFSN----------NNESAAKMIKETMDKKFGSSWHVVIGEG 76
Query: 61 FGSFVTHSPAGFLYFSI-DSLSVLLFK 86
FG +TH LY +L+V ++K
Sbjct: 77 FGFEITHEVKNLLYLYFGGTLAVCVWK 103
>sp|O96015|DNAL4_HUMAN Dynein light chain 4, axonemal OS=Homo sapiens GN=DNAL4 PE=2 SV=1
Length = 105
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Query: 1 MPAHMQQHALRFTRSLVDDYYSESSAPKTSRPNPTHLARALKKEFDDAYGPAWHCVVGKS 60
MP M+ + + + + + N A+ +K+ D +G +WH V+G+
Sbjct: 27 MPEEMRVETMELCVTACEKFSN----------NNESAAKMIKETMDKKFGSSWHVVIGEG 76
Query: 61 FGSFVTHSPAGFLYFSI-DSLSVLLFK 86
FG +TH LY +L+V ++K
Sbjct: 77 FGFEITHEVKNLLYLYFGGTLAVCVWK 103
>sp|Q32KN5|DNAL4_BOVIN Dynein light chain 4, axonemal OS=Bos taurus GN=DNAL4 PE=3 SV=1
Length = 105
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Query: 1 MPAHMQQHALRFTRSLVDDYYSESSAPKTSRPNPTHLARALKKEFDDAYGPAWHCVVGKS 60
MP M+ + + + + + N A+ +K+ D +G +WH V+G+
Sbjct: 27 MPEEMRVETMELCVTACEKFSN----------NNESAAKMIKETMDKKFGSSWHVVIGEG 76
Query: 61 FGSFVTHSPAGFLYFSI-DSLSVLLFK 86
FG +TH LY +L+V ++K
Sbjct: 77 FGFEITHEVKNLLYLYFGGTLAVCVWK 103
>sp|Q1LK22|KHSE_RALME Homoserine kinase OS=Ralstonia metallidurans (strain CH34 / ATCC
43123 / DSM 2839) GN=thrB PE=3 SV=1
Length = 328
Score = 33.9 bits (76), Expect = 0.31, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 5 MQQHALRFTRSLVDDYYSESSAPKTSRPNPTHLARALKKEFDDAYGPAW 53
++ ALRF S + D+Y A +PTH R L++ DDA W
Sbjct: 279 LRAGALRFWVSRLWDFYLPREADMLQPHDPTHFERILRRRIDDAAALPW 327
>sp|A5N4J2|PRSA_CLOK5 Foldase protein PrsA OS=Clostridium kluyveri (strain ATCC 8527 /
DSM 555 / NCIMB 10680) GN=prsA PE=3 SV=1
Length = 341
Score = 33.5 bits (75), Expect = 0.41, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 10 LRFTRSLVDDYYSESSAPKTSRPNPTHLARALKKEFDDA 48
++ T ++DYY+ + + T +PN HLA L K D+A
Sbjct: 177 IKITDKEIEDYYNTNKSKYTEQPNKMHLAHILVKTEDEA 215
>sp|B9DY54|PRSA_CLOK1 Foldase protein PrsA OS=Clostridium kluyveri (strain NBRC 12016)
GN=prsA PE=3 SV=1
Length = 341
Score = 33.5 bits (75), Expect = 0.41, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 10 LRFTRSLVDDYYSESSAPKTSRPNPTHLARALKKEFDDA 48
++ T ++DYY+ + + T +PN HLA L K D+A
Sbjct: 177 IKITDKEIEDYYNTNKSKYTEQPNKMHLAHILVKTEDEA 215
>sp|A0AHD2|DAPEL_LISW6 N-acetyldiaminopimelate deacetylase OS=Listeria welshimeri serovar
6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=lwe0996
PE=3 SV=1
Length = 371
Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Query: 19 DYYSESSAPKTSRPNPTHLARALKKEFDDAYGPAWHCVVGKSFGSFVTHSPAGFLYFSID 78
DYY + P + R LK+ + ++Y PA + G+ FG F++ + +D
Sbjct: 285 DYYQVDNEPLETE----EFIRFLKEHYPESYVPARSAMTGEDFGYFLSEIKGFMFWLGVD 340
Query: 79 S 79
S
Sbjct: 341 S 341
>sp|Q9Y933|GUAA_AERPE GMP synthase [glutamine-hydrolyzing] OS=Aeropyrum pernix (strain
ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
GN=guaA PE=3 SV=1
Length = 512
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 4 HMQQHALRFTRSLVDDYYSESSAPKTSRPNP--THLARALKKEFDDAYGPA 52
H + ++ R ++D++ S AP+T RP + L ++KKE DA A
Sbjct: 173 HPEVRHTQYGREVLDNWLSLVGAPRTWRPGDMVSELVESVKKEVGDALAVA 223
>sp|P11075|SEC7_YEAST Protein transport protein SEC7 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SEC7 PE=1 SV=2
Length = 2009
Score = 29.6 bits (65), Expect = 6.4, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 49 YGPAWHCVVGKSFGSFVTHSPAGFLYFSIDSLSVL 83
+ P W V+GK+F T+S ++F+IDSL L
Sbjct: 1333 WTPLW-AVMGKAFNKIATNSNLAVVFFAIDSLRQL 1366
>sp|Q82UL3|KHSE_NITEU Homoserine kinase OS=Nitrosomonas europaea (strain ATCC 19718 /
NBRC 14298) GN=thrB PE=3 SV=1
Length = 316
Score = 28.9 bits (63), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 22/46 (47%)
Query: 2 PAHMQQHALRFTRSLVDDYYSESSAPKTSRPNPTHLARALKKEFDD 47
PA ++ ALRF S + DYY T + +P H R L+ +
Sbjct: 262 PAMLRAGALRFWLSRLYDYYLPRPGELTHKKDPGHFKRILEHHLSN 307
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.132 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,298,662
Number of Sequences: 539616
Number of extensions: 1235185
Number of successful extensions: 2398
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2362
Number of HSP's gapped (non-prelim): 46
length of query: 95
length of database: 191,569,459
effective HSP length: 65
effective length of query: 30
effective length of database: 156,494,419
effective search space: 4694832570
effective search space used: 4694832570
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)