Query 034433
Match_columns 95
No_of_seqs 103 out of 1091
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 03:53:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034433.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034433hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fo3_A Ubiquitin-conjugating e 100.0 3.9E-35 1.3E-39 188.1 8.7 87 1-92 36-124 (125)
2 2r0j_A Ubiquitin carrier prote 100.0 2.8E-35 9.4E-40 193.6 8.2 88 1-93 31-120 (149)
3 2ayv_A Ubiquitin-conjugating e 100.0 4.8E-35 1.6E-39 195.7 8.6 88 1-93 51-140 (166)
4 1ayz_A UBC2, ubiquitin-conjuga 100.0 5.1E-35 1.8E-39 196.0 8.6 88 1-93 34-123 (169)
5 2c2v_B Ubiquitin-conjugating e 100.0 3.7E-35 1.3E-39 194.0 7.5 88 1-93 35-124 (154)
6 2e2c_A Ubiquitin conjugating e 100.0 9.9E-35 3.4E-39 192.2 9.3 88 1-93 39-128 (156)
7 1z2u_A Ubiquitin-conjugating e 100.0 7.1E-35 2.4E-39 191.8 8.1 88 1-93 34-123 (150)
8 2ucz_A UBC7, ubiquitin conjuga 100.0 1.6E-34 5.4E-39 192.6 9.5 93 1-93 35-137 (165)
9 1yh2_A HSPC150 protein similar 100.0 1.1E-34 3.7E-39 194.3 8.6 92 1-93 34-127 (169)
10 3h8k_A Ubiquitin-conjugating e 100.0 1.1E-34 3.6E-39 193.2 8.5 93 1-93 34-136 (164)
11 4gpr_A Ubiquitin-conjugating e 100.0 1.1E-34 3.8E-39 191.1 8.5 88 1-93 34-123 (151)
12 2c4o_A Ubiquitin-conjugating e 100.0 1.1E-34 3.7E-39 193.7 8.6 88 1-93 49-138 (165)
13 2aak_A UBC1, ubiquitin conjuga 100.0 1.3E-34 4.5E-39 190.9 8.6 88 1-93 34-123 (152)
14 1jat_A Ubiquitin-conjugating e 100.0 9.3E-35 3.2E-39 192.2 7.9 88 1-93 35-124 (155)
15 1fxt_A Ubiquitin-conjugating e 100.0 6.4E-35 2.2E-39 191.8 6.8 88 1-93 32-122 (149)
16 1zdn_A Ubiquitin-conjugating e 100.0 9.5E-35 3.3E-39 192.7 7.7 88 1-93 43-132 (158)
17 2h2y_A Ubiquitin-conjugating e 100.0 2.3E-34 7.9E-39 186.9 9.0 83 1-88 50-134 (136)
18 1i7k_A Ubiquitin-conjugating e 100.0 1.4E-34 4.8E-39 195.5 7.8 88 1-93 60-149 (179)
19 2awf_A Ubiquitin-conjugating e 100.0 2.4E-34 8.2E-39 193.2 8.8 92 1-92 48-149 (172)
20 3rcz_B SUMO-conjugating enzyme 100.0 3.1E-34 1.1E-38 191.2 8.9 89 1-92 45-135 (163)
21 2bep_A Ubiquitin-conjugating e 100.0 3.6E-34 1.2E-38 190.0 8.5 88 1-93 41-131 (159)
22 2a7l_A Hypothetical ubiquitin- 100.0 3.6E-34 1.2E-38 186.2 8.0 80 1-85 54-136 (136)
23 2gjd_A Ubiquitin-conjugating e 100.0 4.8E-34 1.7E-38 189.1 8.5 89 1-92 39-129 (157)
24 3bzh_A Ubiquitin-conjugating e 100.0 5E-34 1.7E-38 194.8 8.6 88 1-93 78-167 (194)
25 3rz3_A Ubiquitin-conjugating e 100.0 5.1E-34 1.8E-38 193.1 8.6 93 1-93 38-140 (183)
26 2a4d_A Ubiquitin-conjugating e 100.0 3.9E-34 1.3E-38 190.4 7.7 89 1-92 59-151 (160)
27 1yrv_A Ubiquitin-conjugating l 100.0 3E-34 1E-38 192.3 6.5 90 1-93 53-145 (169)
28 2f4z_A Tgtwinscan_2721 - E2 do 100.0 6.4E-34 2.2E-38 194.2 8.2 88 1-93 75-165 (193)
29 3k9o_A Ubiquitin-conjugating e 100.0 1E-33 3.5E-38 193.9 8.6 88 1-93 38-128 (201)
30 1y8x_A Ubiquitin-conjugating e 100.0 1.3E-33 4.5E-38 187.7 8.1 87 1-93 35-123 (160)
31 2pwq_A Ubiquitin conjugating e 100.0 3.9E-34 1.3E-38 198.1 5.5 88 1-93 53-143 (216)
32 2grr_A Ubiquitin-conjugating e 100.0 1.5E-33 5.2E-38 187.4 8.0 89 1-92 42-132 (161)
33 1tte_A Ubiquitin-conjugating e 100.0 3.1E-34 1.1E-38 198.5 4.4 87 2-93 34-123 (215)
34 2y9m_A Ubiquitin-conjugating e 100.0 3E-33 1E-37 187.8 8.5 89 1-93 48-140 (172)
35 2hlw_A Ubiquitin-conjugating e 100.0 8.5E-34 2.9E-38 190.3 5.2 89 1-92 69-161 (170)
36 2nvu_C NEDD8-conjugating enzym 100.0 2.4E-33 8.3E-38 189.5 7.4 87 1-93 55-143 (180)
37 2q0v_A Ubiquitin-conjugating e 100.0 2.6E-33 9E-38 185.7 7.3 86 1-92 55-145 (156)
38 3fn1_B NEDD8-conjugating enzym 100.0 4.9E-33 1.7E-37 185.7 7.9 92 1-93 45-140 (167)
39 1c4z_D UBCH7, ubiquitin conjug 100.0 6.6E-33 2.3E-37 183.0 8.3 88 1-93 33-122 (154)
40 1wzv_A Ubiquitin-conjugating e 100.0 4.7E-33 1.6E-37 183.9 7.5 88 1-93 35-124 (155)
41 2onu_A Ubiquitin-conjugating e 100.0 1.1E-33 3.6E-38 186.8 4.3 88 1-93 29-120 (152)
42 1jat_B Ubiquitin-conjugating e 100.0 2.7E-33 9.1E-38 182.2 5.4 86 1-92 40-130 (138)
43 3e46_A Ubiquitin-conjugating e 100.0 9.5E-33 3.2E-37 194.9 8.5 88 1-93 90-180 (253)
44 2z5d_A Ubiquitin-conjugating e 100.0 1.3E-33 4.3E-38 190.8 3.8 88 1-93 51-142 (179)
45 1yf9_A Ubiquitin carrier prote 100.0 3.2E-33 1.1E-37 187.6 4.3 88 1-93 38-129 (171)
46 3o2u_A NEDD8-conjugating enzym 100.0 6.3E-32 2.1E-36 183.9 8.0 86 2-93 65-152 (190)
47 4ddg_A Ubiquitin-conjugating e 100.0 2E-31 6.7E-36 197.9 8.0 88 1-93 33-122 (399)
48 4ds2_A Ubiquitin-conjugating e 100.0 1.6E-31 5.4E-36 178.6 6.6 88 1-93 50-144 (167)
49 3ceg_A Baculoviral IAP repeat- 100.0 1.7E-30 5.9E-35 188.3 8.5 92 1-92 110-213 (323)
50 2f4w_A Ubiquitin-conjugating e 100.0 4E-30 1.4E-34 174.6 7.2 81 1-85 44-125 (187)
51 1zuo_A Hypothetical protein LO 100.0 5.4E-31 1.9E-35 178.8 2.6 85 1-89 60-158 (186)
52 2z6o_A UFM1-conjugating enzyme 99.9 3.8E-24 1.3E-28 142.3 1.9 73 1-77 56-143 (172)
53 3kpa_A Probable ubiquitin fold 99.7 2.3E-18 7.7E-23 112.8 3.4 63 2-72 59-132 (168)
54 3r3q_A Suppressor protein STP2 99.7 5.6E-18 1.9E-22 112.6 5.2 79 3-87 63-157 (162)
55 3obq_A Tumor susceptibility ge 99.5 5.7E-15 1.9E-19 96.6 3.8 74 2-86 55-138 (146)
56 2ebm_A RWD domain-containing p 95.0 0.041 1.4E-06 33.9 4.7 25 17-41 54-78 (128)
57 2yz0_A Serine/threonine-protei 93.6 0.2 6.9E-06 31.1 5.7 24 18-41 62-85 (138)
58 2day_A Ring finger protein 25; 92.7 0.31 1.1E-05 29.8 5.5 24 18-41 59-82 (128)
59 2ebk_A RWD domain-containing p 91.6 0.48 1.7E-05 29.0 5.4 23 18-40 56-78 (128)
60 1ukx_A GCN2, GCN2 EIF2alpha ki 91.4 0.14 4.7E-06 31.8 2.7 23 18-40 63-85 (137)
61 2dax_A Protein C21ORF6; RWD do 89.1 0.27 9.3E-06 31.2 2.7 24 19-42 74-97 (152)
62 2daw_A RWD domain containing p 87.8 0.46 1.6E-05 30.3 3.1 23 19-41 76-98 (154)
63 3zqs_A E3 ubiquitin-protein li 86.0 1.9 6.6E-05 28.7 5.5 49 17-84 37-86 (186)
64 3rls_A YAF9, protein AF-9 homo 43.3 54 0.0019 21.4 5.0 31 2-32 34-64 (175)
65 2bum_A Protocatechuate 3,4-dio 41.7 22 0.00076 23.8 3.0 25 16-40 109-138 (209)
66 3qrl_A Transcription initiatio 30.8 1E+02 0.0035 19.4 5.4 39 2-42 34-75 (140)
67 2bum_B Protocatechuate 3,4-dio 24.9 35 0.0012 23.4 1.8 26 16-41 134-166 (241)
68 1tmx_A Hydroxyquinol 1,2-dioxy 23.3 38 0.0013 23.9 1.8 25 16-40 183-225 (293)
69 2xsu_A Catechol 1,2 dioxygenas 23.1 39 0.0013 24.1 1.8 25 16-40 187-229 (312)
70 2azq_A Catechol 1,2-dioxygenas 22.8 39 0.0013 24.0 1.8 25 16-40 183-225 (311)
71 3t63_M 3,4-PCD, protocatechuat 22.4 42 0.0014 23.0 1.8 25 16-40 133-164 (238)
72 2jrw_A Cyclic extended PEP.1; 22.1 50 0.0017 14.4 1.4 16 31-46 4-19 (26)
73 3n9t_A PNPC; phospholipid bind 21.9 42 0.0014 23.6 1.8 25 16-40 180-222 (290)
74 2k6w_A Putative uncharacterize 21.6 93 0.0032 18.7 3.2 27 3-29 82-108 (120)
75 3t63_A 3,4-PCD, protocatechuat 21.6 51 0.0017 21.9 2.1 23 18-40 102-129 (200)
76 1dmh_A 1,2-CTD, catechol 1,2-d 20.8 46 0.0016 23.7 1.8 24 17-40 187-228 (311)
77 2boy_A 3-chlorocatechol 1,2-di 20.8 47 0.0016 22.9 1.8 25 16-40 153-195 (254)
No 1
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=3.9e-35 Score=188.14 Aligned_cols=87 Identities=26% Similarity=0.437 Sum_probs=78.1
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccc-cccccCCCCcEEeccCCCCCCCCCCCHHH-HHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGF-FHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMY 78 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i-~hpnv~~~G~icl~~l~~~~~~~~W~p~~-i~~il~ 78 (95)
++|+++|.||++||||||.|+++|.||++||++||+|+|.|++ +||||+.+|+||+++| .++|+|++ |++||+
T Consensus 36 ~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~~G~iCl~iL-----~~~W~P~~~i~~vl~ 110 (125)
T 2fo3_A 36 RIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTHVYSNGDICLSLL-----GDDYNPSLSISGLVL 110 (125)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTTBCTTSBBCCGGG-----TTTCCTTCCHHHHHH
T ss_pred hhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCcCCCCCEEEchhc-----CCCCCCCCcHHHHHH
Confidence 5899999999999999999999999999999999999999996 9999999999999999 88999999 999999
Q ss_pred HHHHhcCCCcchhc
Q 034433 79 GSGLAKISSLDDMM 92 (95)
Q Consensus 79 ~i~~ll~~~~~~~~ 92 (95)
+||++|.++-.+.+
T Consensus 111 si~~ll~~p~~~~~ 124 (125)
T 2fo3_A 111 SIISMLSSAKEKKL 124 (125)
T ss_dssp HHHHHHC-------
T ss_pred HHHHHHhCcccccC
Confidence 99999987665543
No 2
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=2.8e-35 Score=193.63 Aligned_cols=88 Identities=30% Similarity=0.597 Sum_probs=82.4
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCCCCcEEeccCCCCCCCCCCCHHH-HHHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYG 79 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~~G~icl~~l~~~~~~~~W~p~~-i~~il~~ 79 (95)
++|+++|.||++||||||.|+++|.||++||++||+|+|.|++|||||+.+|+||+++| .++|+|++ |++||++
T Consensus 31 ~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL-----~~~W~p~~~i~~vl~~ 105 (149)
T 2r0j_A 31 RHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKLGRICLDIL-----KDKWSPALQIRTVLLS 105 (149)
T ss_dssp EEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCBBCCGGG-----TTTCCTTSCHHHHHHH
T ss_pred cEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCCCEEechhc-----CCCCCCCCcHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999 88999999 9999999
Q ss_pred HHHhcC-CCcchhcc
Q 034433 80 SGLAKI-SSLDDMMA 93 (95)
Q Consensus 80 i~~ll~-~~~~~~~~ 93 (95)
|+++|. .+++++++
T Consensus 106 i~~ll~~p~~~~p~n 120 (149)
T 2r0j_A 106 IQALLSSPEPDDPLD 120 (149)
T ss_dssp HHHHHHSCCTTSCSS
T ss_pred HHHHHhCCCCCCchh
Confidence 999975 55666654
No 3
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=4.8e-35 Score=195.67 Aligned_cols=88 Identities=30% Similarity=0.630 Sum_probs=82.6
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCCCCcEEeccCCCCCCCCCCCHHH-HHHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYG 79 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~~G~icl~~l~~~~~~~~W~p~~-i~~il~~ 79 (95)
++|+++|.||++||||||.|+++|.||++||++||+|+|.|++|||||+.+|+||+++| .++|+|++ |++||++
T Consensus 51 ~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~G~ICL~iL-----~~~WsP~~ti~~vL~s 125 (166)
T 2ayv_A 51 FHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNINSQGAICLDIL-----KDQWSPALTISKVLLS 125 (166)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCTTCBBCCGGG-----TTTCCTTCCHHHHHHH
T ss_pred ceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcCCCCCeEEcccc-----cccCCCCCcHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999 88999999 9999999
Q ss_pred HHHhcC-CCcchhcc
Q 034433 80 SGLAKI-SSLDDMMA 93 (95)
Q Consensus 80 i~~ll~-~~~~~~~~ 93 (95)
|+++|. .+++++++
T Consensus 126 I~sll~~pn~~~Pln 140 (166)
T 2ayv_A 126 ISSLLTDPNPDDPLV 140 (166)
T ss_dssp HHHHHHSCCTTSCSC
T ss_pred HHHHHhCCCCCchhh
Confidence 999975 56666654
No 4
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=5.1e-35 Score=195.99 Aligned_cols=88 Identities=35% Similarity=0.634 Sum_probs=82.4
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCCCCcEEeccCCCCCCCCCCCHHH-HHHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYG 79 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~~G~icl~~l~~~~~~~~W~p~~-i~~il~~ 79 (95)
++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+.+|+||+++| .++|+|++ |++||++
T Consensus 34 ~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNI~~~G~ICl~iL-----~~~WsP~~~i~~vL~s 108 (169)
T 1ayz_A 34 MVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDIL-----QNRWTPTYDVASILTS 108 (169)
T ss_dssp EEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTSBBCCGGG-----TTTCCTTCCHHHHHHH
T ss_pred ccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccCCCCCCCeEeehhh-----ccCCCCcCcHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999 88999999 9999999
Q ss_pred HHHhcC-CCcchhcc
Q 034433 80 SGLAKI-SSLDDMMA 93 (95)
Q Consensus 80 i~~ll~-~~~~~~~~ 93 (95)
|+++|. .+++++++
T Consensus 109 i~~ll~~Pn~~~P~n 123 (169)
T 1ayz_A 109 IQSLFNDPNPASPAN 123 (169)
T ss_dssp HHHHHTCCCCSSCSS
T ss_pred HHHHHhCCCCCcHHH
Confidence 999986 55666553
No 5
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.7e-35 Score=194.00 Aligned_cols=88 Identities=30% Similarity=0.574 Sum_probs=81.7
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCCCCcEEeccCCCCCCCCCCCHHH-HHHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYG 79 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~~G~icl~~l~~~~~~~~W~p~~-i~~il~~ 79 (95)
++|+++|.||++||||||.|+++|.||++||++||+|+|.|++|||||+.+|+||+++| .++|+|++ |++||++
T Consensus 35 ~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL-----~~~W~p~~~i~~vl~~ 109 (154)
T 2c2v_B 35 RYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDIL-----KDKWSPALQIRTVLLS 109 (154)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTCBBCCHHH-----HTSCCTTCCHHHHHHH
T ss_pred heEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcCccCCeEEchhc-----cCCCCCCCcHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999 78999999 9999999
Q ss_pred HHHhcC-CCcchhcc
Q 034433 80 SGLAKI-SSLDDMMA 93 (95)
Q Consensus 80 i~~ll~-~~~~~~~~ 93 (95)
|+++|. .+++++++
T Consensus 110 i~~ll~~pn~~~p~n 124 (154)
T 2c2v_B 110 IQALLSAPNPDDPLA 124 (154)
T ss_dssp HHHHTTSCCCCCC--
T ss_pred HHHHHhCCCCCCccc
Confidence 999986 55666654
No 6
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=9.9e-35 Score=192.21 Aligned_cols=88 Identities=31% Similarity=0.479 Sum_probs=82.6
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCCCCcEEeccCCCCCCCCCCCHHH-HHHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYG 79 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~~G~icl~~l~~~~~~~~W~p~~-i~~il~~ 79 (95)
++|+++|.||++||||||.|+++|.||++||++||+|+|.|++|||||+.+|+||+++| .++|+|++ |++||++
T Consensus 39 ~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL-----~~~W~p~~~i~~vL~s 113 (156)
T 2e2c_A 39 FKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDIL-----KENWTASYDVRTILLS 113 (156)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCGGG-----TTTCCTTCCHHHHHHH
T ss_pred cEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCCccCceEECccc-----cccCCCCCcHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999 88999999 9999999
Q ss_pred HHHhcC-CCcchhcc
Q 034433 80 SGLAKI-SSLDDMMA 93 (95)
Q Consensus 80 i~~ll~-~~~~~~~~ 93 (95)
|+++|. .+++++++
T Consensus 114 i~~ll~~pn~~~p~n 128 (156)
T 2e2c_A 114 LQSLLGEPNNASPLN 128 (156)
T ss_dssp HHHHTTSCCCSSCSC
T ss_pred HHHHHhCCCCCCHHH
Confidence 999986 56666654
No 7
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=7.1e-35 Score=191.78 Aligned_cols=88 Identities=32% Similarity=0.636 Sum_probs=82.7
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCCCCcEEeccCCCCCCCCCCCHHH-HHHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYG 79 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~~G~icl~~l~~~~~~~~W~p~~-i~~il~~ 79 (95)
++|+++|.||++||||||.|+++|.||++||++||+|+|.|++|||||+.+|+||+++| .++|+|++ |++||++
T Consensus 34 ~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL-----~~~W~p~~~i~~vl~~ 108 (150)
T 1z2u_A 34 FHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL-----RSQWSPALTISKVLLS 108 (150)
T ss_dssp EEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCGGG-----TTTCCTTCCHHHHHHH
T ss_pred eEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcCCCCCeEeeccc-----cCCCCCCCCHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999 88999999 9999999
Q ss_pred HHHhcC-CCcchhcc
Q 034433 80 SGLAKI-SSLDDMMA 93 (95)
Q Consensus 80 i~~ll~-~~~~~~~~ 93 (95)
|+++|. .+++++++
T Consensus 109 i~~ll~~pn~~~p~n 123 (150)
T 1z2u_A 109 ICSLLCDPNPDDPLV 123 (150)
T ss_dssp HHHHHHSCCTTSCSC
T ss_pred HHHHhhCCCCCCccC
Confidence 999985 56676654
No 8
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.6e-34 Score=192.64 Aligned_cols=93 Identities=32% Similarity=0.656 Sum_probs=83.5
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCCCCcEEeccCCCCC--------CCCCCCHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDN--------VSSSCRFVI 72 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~~G~icl~~l~~~~--------~~~~W~p~~ 72 (95)
++|+++|.||++||||||.|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.++. ..++|+|++
T Consensus 35 ~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ 114 (165)
T 2ucz_A 35 FIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQ 114 (165)
T ss_dssp SEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCTTBCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTC
T ss_pred cEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccCCCCCCCcEeehhhCCccccccccCCCCCCCCCcC
Confidence 589999999999999999999999999999999999999999999999999999999995321 157899999
Q ss_pred -HHHHHHHHHHhcC-CCcchhcc
Q 034433 73 -YFQIMYGSGLAKI-SSLDDMMA 93 (95)
Q Consensus 73 -i~~il~~i~~ll~-~~~~~~~~ 93 (95)
|++||++|+++|. .+++++++
T Consensus 115 ~i~~vL~si~~ll~~Pn~~~p~n 137 (165)
T 2ucz_A 115 SVEKILLSVMSMLSEPNIESGAN 137 (165)
T ss_dssp CHHHHHHHHHHHHHSCCGGGCCC
T ss_pred cHHHHHHHHHHHHhCCCCCCchh
Confidence 9999999999975 56666654
No 9
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-34 Score=194.30 Aligned_cols=92 Identities=26% Similarity=0.468 Sum_probs=82.9
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCCCCcEEeccCCCCCCCCCCCHHH-HHHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYG 79 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~~G~icl~~l~~~~~~~~W~p~~-i~~il~~ 79 (95)
++|+++|.||++||||||.|+++|.||++||++||+|+|.|++|||||+.+|+||+++|..+. .++|+|++ |++||++
T Consensus 34 ~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~~G~iCl~iL~~~~-~~~W~p~~~i~~vL~s 112 (169)
T 1yh2_A 34 DDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPP-KGAWRPSLNIATVLTS 112 (169)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCGGGSCTT-TSCCCTTSCHHHHHHH
T ss_pred heEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccCCcCCeEecccccCCc-ccCCCCCCcHHHHHHH
Confidence 589999999999999999999999999999999999999999999999999999999994220 18899999 9999999
Q ss_pred HHHhcC-CCcchhcc
Q 034433 80 SGLAKI-SSLDDMMA 93 (95)
Q Consensus 80 i~~ll~-~~~~~~~~ 93 (95)
||++|. .+++++++
T Consensus 113 i~~ll~~p~~~~p~n 127 (169)
T 1yh2_A 113 IQLLMSEPNPDDPLM 127 (169)
T ss_dssp HHHHHHSCCTTSCSC
T ss_pred HHHHHhCCCCcchHh
Confidence 999975 56666654
No 10
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=1.1e-34 Score=193.24 Aligned_cols=93 Identities=34% Similarity=0.583 Sum_probs=83.1
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCCCCcEEeccCCCCC--------CCCCCCHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDN--------VSSSCRFVI 72 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~~G~icl~~l~~~~--------~~~~W~p~~ 72 (95)
++|+++|.||++||||||.|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.++. ..++|+|++
T Consensus 34 ~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ 113 (164)
T 3h8k_A 34 FEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQ 113 (164)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTC
T ss_pred cEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCCCCCCcEeeecccCcccccccccccccCCCCCC
Confidence 589999999999999999999999999999999999999999999999999999999995321 137899999
Q ss_pred -HHHHHHHHHHhcC-CCcchhcc
Q 034433 73 -YFQIMYGSGLAKI-SSLDDMMA 93 (95)
Q Consensus 73 -i~~il~~i~~ll~-~~~~~~~~ 93 (95)
|++||++|+++|. .+++++++
T Consensus 114 ti~~vL~~i~~ll~~pn~~~p~n 136 (164)
T 3h8k_A 114 SVEKILLSVVSMLAEPNDESGAN 136 (164)
T ss_dssp CHHHHHHHHHHHHHSCCCSSCSS
T ss_pred cHHHHHHHHHHHHcCCCCCCccC
Confidence 9999999999975 55666553
No 11
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=1.1e-34 Score=191.12 Aligned_cols=88 Identities=26% Similarity=0.566 Sum_probs=82.8
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCCCCcEEeccCCCCCCCCCCCHHH-HHHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYG 79 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~~G~icl~~l~~~~~~~~W~p~~-i~~il~~ 79 (95)
++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+|+||+++| .++|+|++ |++||++
T Consensus 34 ~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~iL-----~~~W~p~~~i~~vl~~ 108 (151)
T 4gpr_A 34 FHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNINKNGVICLDIL-----KDQWSPALTLSRVLLS 108 (151)
T ss_dssp TEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCGGG-----TTTCCTTCCHHHHHHH
T ss_pred eEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceECCCCEEEcccc-----cCCCCCCCcHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999 88999999 9999999
Q ss_pred HHHhcC-CCcchhcc
Q 034433 80 SGLAKI-SSLDDMMA 93 (95)
Q Consensus 80 i~~ll~-~~~~~~~~ 93 (95)
|+++|. .+++++++
T Consensus 109 i~~ll~~p~~~~p~n 123 (151)
T 4gpr_A 109 ISSLLTDPNPSDPLD 123 (151)
T ss_dssp HHHHHHCCCTTSCSS
T ss_pred HHHHhcCCCCCCchh
Confidence 999976 56666654
No 12
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=1.1e-34 Score=193.74 Aligned_cols=88 Identities=32% Similarity=0.640 Sum_probs=82.8
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCCCCcEEeccCCCCCCCCCCCHHH-HHHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYG 79 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~~G~icl~~l~~~~~~~~W~p~~-i~~il~~ 79 (95)
++|+++|.||++||||||.|+++|.||++||++||+|+|.|+||||||+.+|+||+++| .++|+|++ |++||++
T Consensus 49 ~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV~~~G~ICl~iL-----~~~W~P~~ti~~vL~s 123 (165)
T 2c4o_A 49 FHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL-----RSQWSPALTISKVLLS 123 (165)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCTTCBBCCGGG-----TTTCCTTCCHHHHHHH
T ss_pred ceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcCCCCCeEeehhh-----cCCCCCcCcHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999 88999999 9999999
Q ss_pred HHHhcC-CCcchhcc
Q 034433 80 SGLAKI-SSLDDMMA 93 (95)
Q Consensus 80 i~~ll~-~~~~~~~~ 93 (95)
|+++|. .+++++++
T Consensus 124 i~~ll~~pn~~~P~n 138 (165)
T 2c4o_A 124 ICSLLCDPNPDDPLV 138 (165)
T ss_dssp HHHHHHSCCTTSCSS
T ss_pred HHHHHhCCCCCcccc
Confidence 999985 56676654
No 13
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=1.3e-34 Score=190.85 Aligned_cols=88 Identities=36% Similarity=0.750 Sum_probs=82.3
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCCCCcEEeccCCCCCCCCCCCHHH-HHHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYG 79 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~~G~icl~~l~~~~~~~~W~p~~-i~~il~~ 79 (95)
++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+|+||+++| .++|+|++ |++||++
T Consensus 34 ~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL-----~~~W~p~~~i~~vl~~ 108 (152)
T 2aak_A 34 MLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-----QNQWSPIYDVAAILTS 108 (152)
T ss_dssp EEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTSBBCCGGG-----TTSCCTTCCHHHHHHH
T ss_pred cEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCCCCCCCEEechhh-----cCCCCCCCcHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999 88999999 9999999
Q ss_pred HHHhcC-CCcchhcc
Q 034433 80 SGLAKI-SSLDDMMA 93 (95)
Q Consensus 80 i~~ll~-~~~~~~~~ 93 (95)
|+++|. .+++++++
T Consensus 109 i~~ll~~p~~~~p~n 123 (152)
T 2aak_A 109 IQSLLCDPNPNSPAN 123 (152)
T ss_dssp HHHHHTSCCTTSCSS
T ss_pred HHHHHhCCCCCcccc
Confidence 999986 55666553
No 14
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=9.3e-35 Score=192.17 Aligned_cols=88 Identities=26% Similarity=0.556 Sum_probs=82.4
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCCCCcEEeccCCCCCCCCCCCHHH-HHHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYG 79 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~~G~icl~~l~~~~~~~~W~p~~-i~~il~~ 79 (95)
++|+++|.||++||||||.|+++|.||++||++||+|+|.|++|||||+.+|+||+++| .++|+|++ |++||++
T Consensus 35 ~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL-----~~~W~p~~~i~~vl~~ 109 (155)
T 1jat_A 35 RYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLDVL-----KTNWSPALQIRTVLLS 109 (155)
T ss_dssp EEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCCBCCGGG-----TTTCCTTCCHHHHHHH
T ss_pred hEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCCCCCEEEchhh-----ccCCCCCCCHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999 88999999 9999999
Q ss_pred HHHhcC-CCcchhcc
Q 034433 80 SGLAKI-SSLDDMMA 93 (95)
Q Consensus 80 i~~ll~-~~~~~~~~ 93 (95)
|+++|. .+++++++
T Consensus 110 i~~ll~~p~~~~p~n 124 (155)
T 1jat_A 110 IQALLASPNPNDPLA 124 (155)
T ss_dssp HHHHHHSCCTTSTTC
T ss_pred HHHHHhCCCCCCccc
Confidence 999975 55666654
No 15
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=6.4e-35 Score=191.82 Aligned_cols=88 Identities=28% Similarity=0.492 Sum_probs=82.1
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCC-CCcEEeccCCCCCCCCCCCHHH-HHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYP-SGTVCLSILNEDNVSSSCRFVI-YFQIMY 78 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~-~G~icl~~l~~~~~~~~W~p~~-i~~il~ 78 (95)
++|+++|.||++||||||.|+++|.||++||++||+|+|.|++|||||+. +|+||+++| .++|+|++ |++||+
T Consensus 32 ~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~~~G~iCl~iL-----~~~W~p~~~i~~vl~ 106 (149)
T 1fxt_A 32 HHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDIL-----KNAWSPVITLKSALI 106 (149)
T ss_dssp SEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCSSSCCBCCHHH-----HTSCCTTCCHHHHHH
T ss_pred eEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcCCCCeEeCCcC-----CCCCCCCCcHHHHHH
Confidence 48999999999999999999999999999999999999999999999998 999999999 88999999 999999
Q ss_pred HHHHhcC-CCcchhcc
Q 034433 79 GSGLAKI-SSLDDMMA 93 (95)
Q Consensus 79 ~i~~ll~-~~~~~~~~ 93 (95)
+|+++|. .+++++++
T Consensus 107 ~i~~ll~~p~~~~p~n 122 (149)
T 1fxt_A 107 SLQALLQSPEPNDPQD 122 (149)
T ss_dssp HHHHHHHSCCSSSCSS
T ss_pred HHHHHHhCCCCCCccc
Confidence 9999975 55666553
No 16
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=9.5e-35 Score=192.70 Aligned_cols=88 Identities=26% Similarity=0.536 Sum_probs=83.3
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCCCCcEEeccCCCCCCCCCCCHHH-HHHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYG 79 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~~G~icl~~l~~~~~~~~W~p~~-i~~il~~ 79 (95)
++|+++|.||++||||||.|+++|.||++||++||+|+|.|++|||||+.+|+||+++| .++|+|++ |++||++
T Consensus 43 ~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL-----~~~W~p~~~i~~vL~~ 117 (158)
T 1zdn_A 43 TDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVNVL-----KRDWTAELGIRHVLLT 117 (158)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTSBBCHHHH-----TTTCCTTCCHHHHHHH
T ss_pred hheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCCCCCCCEEehhhc-----CCCCCCCCcHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999 88999999 9999999
Q ss_pred HHHhcC-CCcchhcc
Q 034433 80 SGLAKI-SSLDDMMA 93 (95)
Q Consensus 80 i~~ll~-~~~~~~~~ 93 (95)
|+++|. .+++++++
T Consensus 118 i~~ll~~pn~~~p~n 132 (158)
T 1zdn_A 118 IKCLLIHPNPESALN 132 (158)
T ss_dssp HHHHHHSCCGGGCSS
T ss_pred HHHHHhCCCCCCccc
Confidence 999875 67777764
No 17
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.3e-34 Score=186.94 Aligned_cols=83 Identities=25% Similarity=0.430 Sum_probs=79.5
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccc-cccccCCCCcEEeccCCCCCCCCCCCHHH-HHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGF-FHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMY 78 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i-~hpnv~~~G~icl~~l~~~~~~~~W~p~~-i~~il~ 78 (95)
++|+++|.||++||||||.|+++|.||++||++||+|+|.|++ |||||+.+|+||+++| .++|+|++ |++||+
T Consensus 50 ~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~~G~ICl~iL-----~~~WsP~~ti~~vL~ 124 (136)
T 2h2y_A 50 RIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTHVYSNGDICLSVL-----GDDYNPSLSISGLIL 124 (136)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTTBCTTCCBCCGGG-----TTTCCTTCCHHHHHH
T ss_pred cccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCcCCCCCEEECccc-----cCCCCCCCcHHHHHH
Confidence 5899999999999999999999999999999999999999996 9999999999999999 88999999 999999
Q ss_pred HHHHhcCCCc
Q 034433 79 GSGLAKISSL 88 (95)
Q Consensus 79 ~i~~ll~~~~ 88 (95)
+||++|.++-
T Consensus 125 si~sll~~p~ 134 (136)
T 2h2y_A 125 SIISMLSSAK 134 (136)
T ss_dssp HHHHHHSSSC
T ss_pred HHHHHHhCcC
Confidence 9999988654
No 18
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.4e-34 Score=195.47 Aligned_cols=88 Identities=27% Similarity=0.445 Sum_probs=82.6
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCCCCcEEeccCCCCCCCCCCCHHH-HHHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYG 79 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~~G~icl~~l~~~~~~~~W~p~~-i~~il~~ 79 (95)
++|+++|.||++||||||.|+++|.||++||++||+|+|.|++|||||+.+|+||+++| .++|+|++ |++||++
T Consensus 60 ~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~G~ICL~iL-----~~~WsP~~ti~~vL~s 134 (179)
T 1i7k_A 60 FKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNISLDIL-----KEKWSALYDVRTILLS 134 (179)
T ss_dssp EEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCTTCBBCCGGG-----TTTCCTTCCHHHHHHH
T ss_pred cccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCccccCCeEEcccC-----cCcCCCCCCHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999 88999999 9999999
Q ss_pred HHHhcC-CCcchhcc
Q 034433 80 SGLAKI-SSLDDMMA 93 (95)
Q Consensus 80 i~~ll~-~~~~~~~~ 93 (95)
|+++|. .+++++++
T Consensus 135 I~sll~~Pn~~~Pln 149 (179)
T 1i7k_A 135 IQSLLGEPNIDSPLN 149 (179)
T ss_dssp HHHHHHSCCTTSCSC
T ss_pred HHHHHhCCCCcchhh
Confidence 999975 56666654
No 19
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=2.4e-34 Score=193.17 Aligned_cols=92 Identities=36% Similarity=0.542 Sum_probs=78.9
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCCCCcEEeccCCCCC--------CCCCCCHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDN--------VSSSCRFVI 72 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~~G~icl~~l~~~~--------~~~~W~p~~ 72 (95)
++|+++|.||++||||||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|..++ ..++|+|++
T Consensus 48 ~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPNV~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ 127 (172)
T 2awf_A 48 YRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIH 127 (172)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTCBBCCGGGSCC---------CTTSCCTTC
T ss_pred cccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCCCCCCCcEehhhcCCcccccccccccCCCCCCcC
Confidence 589999999999999999999999999999999999999999999999999999999995310 137899999
Q ss_pred -HHHHHHHHHHhcC-CCcchhc
Q 034433 73 -YFQIMYGSGLAKI-SSLDDMM 92 (95)
Q Consensus 73 -i~~il~~i~~ll~-~~~~~~~ 92 (95)
|++||++||++|. .++++++
T Consensus 128 ti~~vL~sI~sll~~Pn~~~p~ 149 (172)
T 2awf_A 128 TVETIMISVISMLADPNGDSPA 149 (172)
T ss_dssp CHHHHHHHHHHHHSCC------
T ss_pred cHHHHHHHHHHHHHCcCCCCcc
Confidence 9999999999986 4455554
No 20
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=3.1e-34 Score=191.23 Aligned_cols=89 Identities=49% Similarity=0.916 Sum_probs=81.4
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCCCCcEEeccCCCCCCCCCCCHHH-HHHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYG 79 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~~G~icl~~l~~~~~~~~W~p~~-i~~il~~ 79 (95)
++|+++|.||++||||||.|+++|.||++||++||+|+|.|+||||||+.+|+||+++|.. .++|+|++ |++||++
T Consensus 45 ~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i~HPnV~~~G~iCl~iL~~---~~~W~p~~ti~~vL~~ 121 (163)
T 3rcz_B 45 MNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILNE---EEGWKPAITIKQILLG 121 (163)
T ss_dssp EEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCTTSBBCCGGGCT---TTTCCTTCCHHHHHHH
T ss_pred cEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCCccCCCCCCCcEeccccCC---CCCcCCcCcHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999953 34699999 9999999
Q ss_pred HHHhcC-CCcchhc
Q 034433 80 SGLAKI-SSLDDMM 92 (95)
Q Consensus 80 i~~ll~-~~~~~~~ 92 (95)
|+++|. .++++++
T Consensus 122 i~~ll~~P~~~~p~ 135 (163)
T 3rcz_B 122 IQDLLDDPNIASPA 135 (163)
T ss_dssp HHHHHTSCCTTSCS
T ss_pred HHHHHhCCCCCCcc
Confidence 999986 4555554
No 21
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=3.6e-34 Score=190.02 Aligned_cols=88 Identities=27% Similarity=0.507 Sum_probs=81.9
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCC-CCcEEeccCCCCCCCCCCCHHH-HHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYP-SGTVCLSILNEDNVSSSCRFVI-YFQIMY 78 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~-~G~icl~~l~~~~~~~~W~p~~-i~~il~ 78 (95)
++|+++|.||++||||||.|+++|.||++||++||+|+|.|+||||||+. +|+||+++| .++|+|++ |++||+
T Consensus 41 ~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~~~G~iCl~iL-----~~~W~p~~~i~~vl~ 115 (159)
T 2bep_A 41 TELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDIL-----KDQWAAAMTLRTVLL 115 (159)
T ss_dssp SEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBCCGGG-----TTTCCTTCCHHHHHH
T ss_pred heEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCCccCCCCCCCEEeChhh-----hccCCCCCcHHHHHH
Confidence 58999999999999999999999999999999999999999999999995 999999999 88899999 999999
Q ss_pred HHHHhcC-CCcchhcc
Q 034433 79 GSGLAKI-SSLDDMMA 93 (95)
Q Consensus 79 ~i~~ll~-~~~~~~~~ 93 (95)
+||++|. .+++++++
T Consensus 116 ~i~~ll~~p~~~~p~n 131 (159)
T 2bep_A 116 SLQALLAAAEPDDPQD 131 (159)
T ss_dssp HHHHHHHSCCTTSCSC
T ss_pred HHHHHHhCCCCCCccc
Confidence 9999975 55666554
No 22
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.6e-34 Score=186.19 Aligned_cols=80 Identities=30% Similarity=0.507 Sum_probs=77.5
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeeccccc--ccccCCCCcEEeccCCCCCCCCCCCHHH-HHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFF--HPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIM 77 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~--hpnv~~~G~icl~~l~~~~~~~~W~p~~-i~~il 77 (95)
++|+++|.||+|||||||.|+++|.||++||++||+|+|.|+++ ||||+.+|+||+++| .++|+|++ |++||
T Consensus 54 ~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HPNV~~~G~ICL~iL-----~~~WsP~~ti~~vL 128 (136)
T 2a7l_A 54 TQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSIL-----TEDWSPALSVQSVC 128 (136)
T ss_dssp EEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCBTTBCTTCBBCCGGG-----TTTCCTTSCHHHHH
T ss_pred ceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCCccCCCCCeEEchhc-----CCCCCCCCcHHHHH
Confidence 47999999999999999999999999999999999999999999 999999999999999 88999999 99999
Q ss_pred HHHHHhcC
Q 034433 78 YGSGLAKI 85 (95)
Q Consensus 78 ~~i~~ll~ 85 (95)
++||++|.
T Consensus 129 ~sI~slL~ 136 (136)
T 2a7l_A 129 LSIISMLS 136 (136)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHhC
Confidence 99999874
No 23
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=4.8e-34 Score=189.13 Aligned_cols=89 Identities=52% Similarity=0.963 Sum_probs=80.9
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCCCCcEEeccCCCCCCCCCCCHHH-HHHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYG 79 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~~G~icl~~l~~~~~~~~W~p~~-i~~il~~ 79 (95)
++|+++|.||++||||||.|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.. .++|+|++ |++||++
T Consensus 39 ~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~---~~~W~p~~~i~~vl~~ 115 (157)
T 2gjd_A 39 QKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGFYHPNVYPSGTICLSILNE---DQDWRPAITLKQIVLG 115 (157)
T ss_dssp EEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTTCCCTTBCTTSBBCCGGGCT---TTTCCTTCCHHHHHHH
T ss_pred cEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCCCccCCCCCCCcEeeecccC---CCCCCCCCcHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999942 23899999 9999999
Q ss_pred HHHhcC-CCcchhc
Q 034433 80 SGLAKI-SSLDDMM 92 (95)
Q Consensus 80 i~~ll~-~~~~~~~ 92 (95)
|+++|. .++++++
T Consensus 116 i~~ll~~p~~~~p~ 129 (157)
T 2gjd_A 116 VQDLLDSPNPNSPA 129 (157)
T ss_dssp HHHHHTSCCTTCCC
T ss_pred HHHHHhCCCCCCcc
Confidence 999986 4455544
No 24
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=5e-34 Score=194.84 Aligned_cols=88 Identities=28% Similarity=0.563 Sum_probs=83.0
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCCCCcEEeccCCCCCCCCCCCHHH-HHHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYG 79 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~~G~icl~~l~~~~~~~~W~p~~-i~~il~~ 79 (95)
++|+++|.||++||||||.|+++|.||++||++||+|+|.|+||||||+.+|+||+++| .++|+|++ |++||++
T Consensus 78 ~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~G~ICL~iL-----~~~WsP~~ti~~vL~s 152 (194)
T 3bzh_A 78 YEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDIL-----KDNWSPALTISKVLLS 152 (194)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTCBBCCGGG-----TTTCCTTCCHHHHHHH
T ss_pred ccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceECCCCceechhh-----hccCCCcCcHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999 88999999 9999999
Q ss_pred HHHhcC-CCcchhcc
Q 034433 80 SGLAKI-SSLDDMMA 93 (95)
Q Consensus 80 i~~ll~-~~~~~~~~ 93 (95)
|+++|. .+++++++
T Consensus 153 I~~ll~~pnp~~Pln 167 (194)
T 3bzh_A 153 ICSLLTDCNPADPLV 167 (194)
T ss_dssp HHHHHHSCCTTSCSC
T ss_pred HHHHHhCCCCccchh
Confidence 999986 46777654
No 25
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=5.1e-34 Score=193.11 Aligned_cols=93 Identities=32% Similarity=0.505 Sum_probs=81.4
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCCCCcEEeccCCCCCC--------CCCCCHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNV--------SSSCRFVI 72 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~~G~icl~~l~~~~~--------~~~W~p~~ 72 (95)
++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+++|+||+++|.++.+ .++|+|++
T Consensus 38 ~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~ 117 (183)
T 3rz3_A 38 YNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQ 117 (183)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCCTTBCTTSBBCCTTC--------------CCCCTTC
T ss_pred hheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCccCCCCCCCcEehhhcCcccccccccccccCCCCCcC
Confidence 5899999999999999999999999999999999999999999999999999999999952110 28899999
Q ss_pred -HHHHHHHHHHhcC-CCcchhcc
Q 034433 73 -YFQIMYGSGLAKI-SSLDDMMA 93 (95)
Q Consensus 73 -i~~il~~i~~ll~-~~~~~~~~ 93 (95)
|++||++|+++|. .+++++++
T Consensus 118 ~i~~vL~si~~ll~~Pn~~~p~n 140 (183)
T 3rz3_A 118 NVRTILLSVISLLNEPNTFSPAN 140 (183)
T ss_dssp CHHHHHHHHHHHHHSCCCSSCSS
T ss_pred cHHHHHHHHHHHHhCCCCCCccc
Confidence 9999999999986 45665543
No 26
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=3.9e-34 Score=190.36 Aligned_cols=89 Identities=16% Similarity=0.209 Sum_probs=81.0
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccC-CCCcEEeccCCCCCCCCCCCHHH-HHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVY-PSGTVCLSILNEDNVSSSCRFVI-YFQIMY 78 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~-~~G~icl~~l~~~~~~~~W~p~~-i~~il~ 78 (95)
++|+++|.||++||||||.|+++|.||++||++||+|+|.|++|||||+ .+|+||+++|+. .++|+|++ |++||+
T Consensus 59 ~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPNV~~~~G~ICl~iL~~---~~~WsP~~ti~~vL~ 135 (160)
T 2a4d_A 59 TRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISV---LAKWQNSYSIKVVLQ 135 (160)
T ss_dssp CEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTTCBBCGGGSHH---HHTCCTTCCHHHHHH
T ss_pred eeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCceeCCEECCCCEEehhhcCC---ccCCCccCcHHHHHH
Confidence 4899999999999999999999999999999999999999999999999 699999999931 18899999 999999
Q ss_pred HHHHhcC--CCcchhc
Q 034433 79 GSGLAKI--SSLDDMM 92 (95)
Q Consensus 79 ~i~~ll~--~~~~~~~ 92 (95)
+||++|. .++++++
T Consensus 136 sI~~ll~~~pn~~~P~ 151 (160)
T 2a4d_A 136 ELRRLMMSKENMKLPQ 151 (160)
T ss_dssp HHHHHHTSTTTTTCCC
T ss_pred HHHHHHccCCCCCCCC
Confidence 9999996 3555554
No 27
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3e-34 Score=192.32 Aligned_cols=90 Identities=29% Similarity=0.509 Sum_probs=82.0
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeeccccccccc-CCCCcEEeccCCCCCCCCCCCHHH-HHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNV-YPSGTVCLSILNEDNVSSSCRFVI-YFQIMY 78 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv-~~~G~icl~~l~~~~~~~~W~p~~-i~~il~ 78 (95)
++|+++|.||++||||||.|+++|.||++||++||+|+|.|+|||||| +.+|+||+++|.. .++|+|++ |++||+
T Consensus 53 ~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~---~~~WsP~~ti~~vL~ 129 (169)
T 1yrv_A 53 MEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVDPHTGQPCIDFLDN---PEKWNTNYTLSSILL 129 (169)
T ss_dssp CEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTTBCTTTCCBCCHHHHC---GGGCCTTCCHHHHHH
T ss_pred ccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccCcccCCCCeEeehhhcC---CcCCCCcCCHHHHHH
Confidence 589999999999999999999999999999999999999999999999 7899999999931 28999999 999999
Q ss_pred HHHHhcC-CCcchhcc
Q 034433 79 GSGLAKI-SSLDDMMA 93 (95)
Q Consensus 79 ~i~~ll~-~~~~~~~~ 93 (95)
+||++|. .+++++++
T Consensus 130 sI~sll~~Pn~~~Pln 145 (169)
T 1yrv_A 130 ALQVMLSNPVLENPVN 145 (169)
T ss_dssp HHHHHHTSCCTTSCSC
T ss_pred HHHHHHhCCCCCCchh
Confidence 9999986 55666554
No 28
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=6.4e-34 Score=194.15 Aligned_cols=88 Identities=31% Similarity=0.566 Sum_probs=81.8
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccC-CCCcEEeccCCCCCCCCCCCHHH-HHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVY-PSGTVCLSILNEDNVSSSCRFVI-YFQIMY 78 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~-~~G~icl~~l~~~~~~~~W~p~~-i~~il~ 78 (95)
++|+++|.||++||||||.|+++|.||++||++||+|+|.|+||||||+ .+|+||+++| .++|+|++ |++||+
T Consensus 75 ~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL-----~~~WsP~~ti~~vL~ 149 (193)
T 2f4z_A 75 HRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPKMKFVTKIWHPNISSQTGAICLDIL-----KHEWSPALTIRTALL 149 (193)
T ss_dssp EEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCCGGG-----TTTCCTTSCHHHHHH
T ss_pred ceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCeEEEecCCccCCCcCCCCEEECccc-----cccCCCCCCHHHHHH
Confidence 4799999999999999999999999999999999999999999999999 5999999999 78899999 999999
Q ss_pred HHHHhcC-CCcchhcc
Q 034433 79 GSGLAKI-SSLDDMMA 93 (95)
Q Consensus 79 ~i~~ll~-~~~~~~~~ 93 (95)
+||++|. .+++++++
T Consensus 150 sI~sll~~pnp~~P~n 165 (193)
T 2f4z_A 150 SIQAMLADPVPTDPQD 165 (193)
T ss_dssp HHHHHHHSCCTTSCSC
T ss_pred HHHHHHhCCCCCCccc
Confidence 9999875 56666654
No 29
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=1e-33 Score=193.91 Aligned_cols=88 Identities=27% Similarity=0.507 Sum_probs=82.7
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCC-CCcEEeccCCCCCCCCCCCHHH-HHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYP-SGTVCLSILNEDNVSSSCRFVI-YFQIMY 78 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~-~G~icl~~l~~~~~~~~W~p~~-i~~il~ 78 (95)
++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+. +|+||+++| .++|+|++ |++||+
T Consensus 38 ~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~~G~iCl~iL-----~~~W~p~~~i~~vL~ 112 (201)
T 3k9o_A 38 TELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDIL-----KDQWAAAMTLRTVLL 112 (201)
T ss_dssp SEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCCGGG-----TTTCCTTCCHHHHHH
T ss_pred cEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcccCCCcCCCCeeeCccc-----ccCCCCCCCHHHHHH
Confidence 58999999999999999999999999999999999999999999999995 999999999 88999999 999999
Q ss_pred HHHHhcC-CCcchhcc
Q 034433 79 GSGLAKI-SSLDDMMA 93 (95)
Q Consensus 79 ~i~~ll~-~~~~~~~~ 93 (95)
+||++|. .+|+++++
T Consensus 113 ~i~~ll~~p~p~~p~n 128 (201)
T 3k9o_A 113 SLQALLAAAEPDDPQD 128 (201)
T ss_dssp HHHHHHHSCCTTSCSC
T ss_pred HHHHHhcCCCCCCccc
Confidence 9999975 66777654
No 30
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-33 Score=187.65 Aligned_cols=87 Identities=26% Similarity=0.515 Sum_probs=80.7
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCCCCcEEeccCCCCCCCCCCCHHH-HHHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYG 79 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~~G~icl~~l~~~~~~~~W~p~~-i~~il~~ 79 (95)
++|+++| ||++||||||.|+++|.||++||++||+|+|.|++|||||+.+|+||+++| .++|+|++ |++||++
T Consensus 35 ~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL-----~~~W~p~~~i~~vL~~ 108 (160)
T 1y8x_A 35 LNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNIL-----REDWKPVLTINSIIYG 108 (160)
T ss_dssp TEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCBBCCGGG-----TTTCCTTCCHHHHHHH
T ss_pred ceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcCCCCCeEEcccc-----hhhccCCCCHHHHHHH
Confidence 5899988 999999999999999999999999999999999999999999999999999 78999999 9999999
Q ss_pred HHHhcC-CCcchhcc
Q 034433 80 SGLAKI-SSLDDMMA 93 (95)
Q Consensus 80 i~~ll~-~~~~~~~~ 93 (95)
|+++|. .+++++++
T Consensus 109 i~~ll~~Pn~~~p~n 123 (160)
T 1y8x_A 109 LQYLFLEPNPEDPLN 123 (160)
T ss_dssp HHHHHHSCCCSSCSC
T ss_pred HHHHHhCCCCCCccC
Confidence 999975 55665543
No 31
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=3.9e-34 Score=198.08 Aligned_cols=88 Identities=31% Similarity=0.592 Sum_probs=82.1
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCC-CCcEEeccCCCCCCCCCCCHHH-HHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYP-SGTVCLSILNEDNVSSSCRFVI-YFQIMY 78 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~-~G~icl~~l~~~~~~~~W~p~~-i~~il~ 78 (95)
++|+++|.||++||||||.|+++|.||++||++||+|+|.|+||||||+. +|+||+++| .++|+|++ |++||+
T Consensus 53 ~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL-----~~~WsP~~ti~~VL~ 127 (216)
T 2pwq_A 53 FEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPNISSQTGAICLDVL-----KNEWSPALTIRTALL 127 (216)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBCCHHH-----HHHCCTTCCHHHHHH
T ss_pred ceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCCCcCCCCEEEchhh-----cccCCCCCcHHHHHH
Confidence 58999999999999999999999999999999999999999999999994 999999999 78899999 999999
Q ss_pred HHHHhcC-CCcchhcc
Q 034433 79 GSGLAKI-SSLDDMMA 93 (95)
Q Consensus 79 ~i~~ll~-~~~~~~~~ 93 (95)
+||++|. .+|+++++
T Consensus 128 sI~sLL~~Pnp~dPln 143 (216)
T 2pwq_A 128 SIQALLSDPQPDDPQD 143 (216)
T ss_dssp HHHHHHHSCCTTSCSC
T ss_pred HHHHHHhCCCCCCccc
Confidence 9999975 56776654
No 32
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=1.5e-33 Score=187.41 Aligned_cols=89 Identities=55% Similarity=1.017 Sum_probs=81.1
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCCCCcEEeccCCCCCCCCCCCHHH-HHHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYG 79 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~~G~icl~~l~~~~~~~~W~p~~-i~~il~~ 79 (95)
++|+++|.||++||||||.|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.. .++|+|++ |++||++
T Consensus 42 ~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~---~~~W~p~~~i~~vl~~ 118 (161)
T 2grr_A 42 MNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEE---DKDWRPAITIKQILLG 118 (161)
T ss_dssp EEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCSTTBCTTSBBCCGGGCT---TTTCCTTCCHHHHHHH
T ss_pred cEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecCcccCCCCCCCeEeehhcCC---CCCcCCCCcHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999942 25899999 9999999
Q ss_pred HHHhcC-CCcchhc
Q 034433 80 SGLAKI-SSLDDMM 92 (95)
Q Consensus 80 i~~ll~-~~~~~~~ 92 (95)
|+++|. .++++++
T Consensus 119 i~~ll~~p~~~~p~ 132 (161)
T 2grr_A 119 IQELLNEPNIQSPA 132 (161)
T ss_dssp HHHHHHSCCTTSCS
T ss_pred HHHHHhCCCCCCcc
Confidence 999975 4555554
No 33
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=3.1e-34 Score=198.47 Aligned_cols=87 Identities=29% Similarity=0.502 Sum_probs=82.1
Q ss_pred EEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCC-CCcEEeccCCCCCCCCCCCHHH-HHHHHHH
Q 034433 2 IWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYP-SGTVCLSILNEDNVSSSCRFVI-YFQIMYG 79 (95)
Q Consensus 2 ~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~-~G~icl~~l~~~~~~~~W~p~~-i~~il~~ 79 (95)
+|+++|.||++||||||.|+++|.||++||++||+|+|.|+||||||+. +|+||+++| .++|+|++ |++||++
T Consensus 34 ~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL-----~~~WsP~~ti~~VL~s 108 (215)
T 1tte_A 34 HLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDIL-----RNAWSPVITLKSALIS 108 (215)
T ss_dssp EEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSCSSSSCCCSSTT-----TCCSCTTCCHHHHHHH
T ss_pred ccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCcCCCCEEECccC-----CCCCCCcCcHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999 999999999 88999999 9999999
Q ss_pred HHHhcC-CCcchhcc
Q 034433 80 SGLAKI-SSLDDMMA 93 (95)
Q Consensus 80 i~~ll~-~~~~~~~~ 93 (95)
||++|. .+|+++++
T Consensus 109 I~sLL~~Pnp~~Pln 123 (215)
T 1tte_A 109 LQALLQSPEPNDPQD 123 (215)
T ss_dssp HHHHHTSCCCSSCSC
T ss_pred HHHHHhCCCCCCccC
Confidence 999986 46666553
No 34
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=3e-33 Score=187.78 Aligned_cols=89 Identities=28% Similarity=0.464 Sum_probs=81.6
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecc-cccccccC-CCCcEEeccCCCCCCCCCCCHHH-HHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQ-GFFHPNVY-PSGTVCLSILNEDNVSSSCRFVI-YFQIM 77 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t-~i~hpnv~-~~G~icl~~l~~~~~~~~W~p~~-i~~il 77 (95)
++|+++|.||++||||||.|+++|.||++||++||+|+|.| +||||||+ .+|+||+++|. .++|+|++ |++||
T Consensus 48 ~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~~i~HPni~~~~G~iCl~iL~----~~~W~p~~~i~~vL 123 (172)
T 2y9m_A 48 SKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKISFMQNNILHCNVKSATGEICLNILK----PEEWTPVWDLLHCV 123 (172)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECTTSCCCTTEETTTTEECCGGGS----TTTCCTTCCHHHHH
T ss_pred hEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCCEEEEeeCCeecCCCcCCCCEEeccccC----CCCCCCcCcHHHHH
Confidence 58999999999999999999999999999999999999999 99999995 79999999993 38999999 99999
Q ss_pred HHHHHhcC-CCcchhcc
Q 034433 78 YGSGLAKI-SSLDDMMA 93 (95)
Q Consensus 78 ~~i~~ll~-~~~~~~~~ 93 (95)
++||++|. .+++++++
T Consensus 124 ~si~~ll~~p~~~~p~n 140 (172)
T 2y9m_A 124 HAVWRLLREPVCDSPLD 140 (172)
T ss_dssp HHHHHHHHSCCTTSCSS
T ss_pred HHHHHHHhCCCCCCccC
Confidence 99999975 56666654
No 35
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=8.5e-34 Score=190.30 Aligned_cols=89 Identities=17% Similarity=0.217 Sum_probs=80.6
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccC-CCCcEEeccCCCCCCCCCCCHHH-HHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVY-PSGTVCLSILNEDNVSSSCRFVI-YFQIMY 78 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~-~~G~icl~~l~~~~~~~~W~p~~-i~~il~ 78 (95)
++|+++|.||++||||||.|+++|.||++||++||+|+|.|+||||||+ .+|+||+++|+. .++|+|++ |++||+
T Consensus 69 ~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPNV~~~~G~ICl~iL~~---~~~WsP~~ti~~vL~ 145 (170)
T 2hlw_A 69 TRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISV---LAKWQNSYSIKVVLQ 145 (170)
T ss_dssp CBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCCSSBCSSSCBBCTTTCHH---HHTCCSSCCHHHHHH
T ss_pred eeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecccccCCEeCCCCEEEhhhcCC---CCCCCccCcHHHHHH
Confidence 4799999999999999999999999999999999999999999999999 699999999931 18899999 999999
Q ss_pred HHHHhcCC--Ccchhc
Q 034433 79 GSGLAKIS--SLDDMM 92 (95)
Q Consensus 79 ~i~~ll~~--~~~~~~ 92 (95)
+||++|.+ ++++++
T Consensus 146 sI~~ll~~~pn~~~P~ 161 (170)
T 2hlw_A 146 ELRRLMMSKENMKLPQ 161 (170)
T ss_dssp HHHHHHHSTTTSSSCC
T ss_pred HHHHHHccCCCCCCCC
Confidence 99999964 555544
No 36
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.4e-33 Score=189.48 Aligned_cols=87 Identities=25% Similarity=0.473 Sum_probs=80.9
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCCCCcEEeccCCCCCCCCCCCHHH-HHHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYG 79 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~~G~icl~~l~~~~~~~~W~p~~-i~~il~~ 79 (95)
++|+++| ||++||||||.|+++|.||++||++||+|+|.|++|||||+.+|+||+++| .++|+|++ |++||++
T Consensus 55 ~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNV~~~G~iCl~iL-----~~~W~p~~~i~~vL~s 128 (180)
T 2nvu_C 55 LNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVALNIL-----REDWKPVLTINSIIYG 128 (180)
T ss_dssp TEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTSBBCCGGG-----TTSCCTTCCHHHHHHH
T ss_pred cceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCCCCCCCcEEcccc-----cccCCCCCCHHHHHHH
Confidence 5899998 999999999999999999999999999999999999999999999999999 78999999 9999999
Q ss_pred HHHhcC-CCcchhcc
Q 034433 80 SGLAKI-SSLDDMMA 93 (95)
Q Consensus 80 i~~ll~-~~~~~~~~ 93 (95)
|+++|. .+++++++
T Consensus 129 i~~ll~~Pn~~~p~n 143 (180)
T 2nvu_C 129 LQYLFLEPNPEDPLN 143 (180)
T ss_dssp HHHHHHSCCTTSCSS
T ss_pred HHHHHhCCCCCCccC
Confidence 999975 56666543
No 37
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=2.6e-33 Score=185.69 Aligned_cols=86 Identities=27% Similarity=0.441 Sum_probs=79.1
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCCCCcE---EeccCCCCCCCCCCCHHH-HHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTV---CLSILNEDNVSSSCRFVI-YFQI 76 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~~G~i---cl~~l~~~~~~~~W~p~~-i~~i 76 (95)
++|+++|.||++||||||.|+++|.||++||++||+|+|.|+||||||+.+|+| |+++| . +|+|++ |++|
T Consensus 55 ~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNV~~~G~icisCL~iL-----~-~WsP~~ti~~v 128 (156)
T 2q0v_A 55 SNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIEMSCVDNCGRVIKNNLHIL-----K-NWNRNYTIETI 128 (156)
T ss_dssp CEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTSBBCGGGSHHH-----H-TCCTTCCHHHH
T ss_pred eeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccccCCCccCCeEehhhcccc-----c-CCCCcCcHHHH
Confidence 489999999999999999999999999999999999999999999999999999 89988 4 499999 9999
Q ss_pred HHHHHHhcC-CCcchhc
Q 034433 77 MYGSGLAKI-SSLDDMM 92 (95)
Q Consensus 77 l~~i~~ll~-~~~~~~~ 92 (95)
|++||++|. .++++++
T Consensus 129 L~sI~~ll~~Pn~~~p~ 145 (156)
T 2q0v_A 129 LISLRQEMLSSANKRLP 145 (156)
T ss_dssp HHHHHHHTTSTTTTTCC
T ss_pred HHHHHHHHhCCCCCCcC
Confidence 999999986 3455544
No 38
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=99.98 E-value=4.9e-33 Score=185.74 Aligned_cols=92 Identities=22% Similarity=0.419 Sum_probs=82.4
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCCCCcEEeccCCCCC-CCCCCCHHH-HHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDN-VSSSCRFVI-YFQIMY 78 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~~G~icl~~l~~~~-~~~~W~p~~-i~~il~ 78 (95)
++|+++| ||++||||||.|+++|.||++||++||+|+|.|++|||||+.+|+||+++|..+. ..++|+|++ |++||+
T Consensus 45 ~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~ 123 (167)
T 3fn1_B 45 HCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVW 123 (167)
T ss_dssp TEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSSBCTTCCBCCGGGSBCSSSTTSBCTTCCHHHHHH
T ss_pred eeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCCCCCCCEEechhhccCCCCCCCCCCcCcHHHHHH
Confidence 4799988 8999999999999999999999999999999999999999999999999996421 124899999 999999
Q ss_pred HHHHhcCC--Ccchhcc
Q 034433 79 GSGLAKIS--SLDDMMA 93 (95)
Q Consensus 79 ~i~~ll~~--~~~~~~~ 93 (95)
+|+++|.+ +++++++
T Consensus 124 ~i~~ll~~~pn~~~p~n 140 (167)
T 3fn1_B 124 GLNSLFTDLLNFDDPLN 140 (167)
T ss_dssp HHHHTTTTTCCSSSCSC
T ss_pred HHHHHHcCCCCCCcchh
Confidence 99999986 6777654
No 39
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=99.98 E-value=6.6e-33 Score=183.04 Aligned_cols=88 Identities=23% Similarity=0.505 Sum_probs=80.8
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCCCCcEEeccCCCCCCCCCCCHHH-HHHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYG 79 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~~G~icl~~l~~~~~~~~W~p~~-i~~il~~ 79 (95)
++|+++|. |++||||||.|+++|.||++||++||+|+|.|++|||||+.+|+||+++|. .++|+|++ |++||++
T Consensus 33 ~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~----~~~W~p~~~i~~vl~~ 107 (154)
T 1c4z_D 33 LTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVIS----AENWKPATKTDQVIQS 107 (154)
T ss_dssp SEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTCBBCCTTTS----SSSCCTTCCHHHHHHH
T ss_pred heEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCCCCCEEECCCCC----CCCCCCCCcHHHHHHH
Confidence 58999998 999999999999999999999999999999999999999999999999994 48899999 9999999
Q ss_pred HHHhcC-CCcchhcc
Q 034433 80 SGLAKI-SSLDDMMA 93 (95)
Q Consensus 80 i~~ll~-~~~~~~~~ 93 (95)
|+++|. .+++++++
T Consensus 108 i~~ll~~p~~~~p~n 122 (154)
T 1c4z_D 108 LIALVNDPQPEHPLR 122 (154)
T ss_dssp HHHHHHSCCCSSCSC
T ss_pred HHHHHcCCCCCchhh
Confidence 999975 55666543
No 40
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=99.98 E-value=4.7e-33 Score=183.89 Aligned_cols=88 Identities=24% Similarity=0.530 Sum_probs=81.5
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCCCCcEEeccCCCCCCCCCCCHHH-HHHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYG 79 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~~G~icl~~l~~~~~~~~W~p~~-i~~il~~ 79 (95)
++|+++|. |++||||||.|+++|.||++||++||+|+|.|++|||||+.+|+||+++|+ .++|+|++ |++||++
T Consensus 35 ~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G~iCl~iL~----~~~W~p~~~i~~vl~~ 109 (155)
T 1wzv_A 35 LVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVDENGQICLPIIS----SENWKPCTKTCQVLEA 109 (155)
T ss_dssp TEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBCCCGGGC----TTTCCTTCCHHHHHHH
T ss_pred heEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCCCCCeEeecCCC----ccCCCCCCcHHHHHHH
Confidence 58999999 999999999999999999999999999999999999999999999999995 67899999 9999999
Q ss_pred HHHhcC-CCcchhcc
Q 034433 80 SGLAKI-SSLDDMMA 93 (95)
Q Consensus 80 i~~ll~-~~~~~~~~ 93 (95)
|+++|. .+++++++
T Consensus 110 i~~ll~~p~~~~p~n 124 (155)
T 1wzv_A 110 LNVLVNRPNIREPLR 124 (155)
T ss_dssp HHHHHHSCCSSSCSS
T ss_pred HHHHHhCCCCCchHH
Confidence 999875 55666553
No 41
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=99.98 E-value=1.1e-33 Score=186.75 Aligned_cols=88 Identities=24% Similarity=0.479 Sum_probs=80.7
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCC-CCcEEeccCCCCCCCCCCCHHH-HHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYP-SGTVCLSILNEDNVSSSCRFVI-YFQIMY 78 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~-~G~icl~~l~~~~~~~~W~p~~-i~~il~ 78 (95)
++|+++|.||++||||||.|+++|.||++||++||+|+|.|++|||||+. +|+||+++| .++|+|++ |++||+
T Consensus 29 ~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~~~G~iCl~il-----~~~W~p~~~i~~vl~ 103 (152)
T 2onu_A 29 QDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDEASGSVCLDVI-----NQTWTPLYSLVNVFE 103 (152)
T ss_dssp EEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTTCBBCHHHH-----HHHCCTTCCHHHHHH
T ss_pred ceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcCcCCeEecccc-----cccCCCCCCHHHHHH
Confidence 47999999999999999999999999999999999999999999999995 999999999 78899999 999999
Q ss_pred H-HHHhcC-CCcchhcc
Q 034433 79 G-SGLAKI-SSLDDMMA 93 (95)
Q Consensus 79 ~-i~~ll~-~~~~~~~~ 93 (95)
+ ||+||. .+++++++
T Consensus 104 ~ii~~Ll~~Pn~~~P~n 120 (152)
T 2onu_A 104 VFLPQLLTYPNPSDPLN 120 (152)
T ss_dssp THHHHHHHSCCCSSCSS
T ss_pred HHHHHHHhCCCCCCccc
Confidence 9 678764 56666654
No 42
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=99.98 E-value=2.7e-33 Score=182.20 Aligned_cols=86 Identities=20% Similarity=0.352 Sum_probs=78.5
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCCC-CcE--EeccCCCCCCCCCCCHHH-HHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPS-GTV--CLSILNEDNVSSSCRFVI-YFQI 76 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~~-G~i--cl~~l~~~~~~~~W~p~~-i~~i 76 (95)
++|+++|.||++||||||.|+++|.||++||++||+|+|.|+||||||+.+ |+| |++++ . +|+|++ |++|
T Consensus 40 ~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~~G~i~~cL~~l-----~-~W~p~~~i~~v 113 (138)
T 1jat_B 40 TKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINLPCVNPTTGEVQTDFHTL-----R-DWKRAYTMETL 113 (138)
T ss_dssp CEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTTCBBCTTSHHH-----H-TCCTTCCHHHH
T ss_pred eEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcccccCCEeCCCCEEeeecccC-----C-CCCCcCcHHHH
Confidence 489999999999999999999999999999999999999999999999996 999 89988 4 699999 9999
Q ss_pred HHHHHHhcCC-Ccchhc
Q 034433 77 MYGSGLAKIS-SLDDMM 92 (95)
Q Consensus 77 l~~i~~ll~~-~~~~~~ 92 (95)
|++||++|.+ ++++++
T Consensus 114 l~~i~~ll~~pn~~~p~ 130 (138)
T 1jat_B 114 LLDLRKEMATPANKKLR 130 (138)
T ss_dssp HHHHHHHHTSHHHHTSC
T ss_pred HHHHHHHHcCCCCCCCC
Confidence 9999999873 344443
No 43
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=99.98 E-value=9.5e-33 Score=194.87 Aligned_cols=88 Identities=27% Similarity=0.507 Sum_probs=82.6
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCC-CCcEEeccCCCCCCCCCCCHHH-HHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYP-SGTVCLSILNEDNVSSSCRFVI-YFQIMY 78 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~-~G~icl~~l~~~~~~~~W~p~~-i~~il~ 78 (95)
++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+. +|+||+++| .++|+|++ |++||+
T Consensus 90 ~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~~G~ICL~iL-----~~~WsP~~ti~~vL~ 164 (253)
T 3e46_A 90 TELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDIL-----KDQWAAAMTLRTVLL 164 (253)
T ss_dssp SEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBCCGGG-----TTCCCTTCCHHHHHH
T ss_pred cEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCccCCccCCCCeeecccc-----cCCCCCCCCHHHHHH
Confidence 58999999999999999999999999999999999999999999999995 999999999 88999999 999999
Q ss_pred HHHHhcC-CCcchhcc
Q 034433 79 GSGLAKI-SSLDDMMA 93 (95)
Q Consensus 79 ~i~~ll~-~~~~~~~~ 93 (95)
+|+++|. .+|+++++
T Consensus 165 sI~~ll~~pnp~~Pln 180 (253)
T 3e46_A 165 SLQALLAAAEPDDPQD 180 (253)
T ss_dssp HHHHHHHSCCTTSCSC
T ss_pred HHHHHhcCCCCCChhh
Confidence 9999975 66777654
No 44
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=99.98 E-value=1.3e-33 Score=190.81 Aligned_cols=88 Identities=26% Similarity=0.441 Sum_probs=82.1
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCC-CCcEEeccCCCCCCCCCCCHHH-HHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYP-SGTVCLSILNEDNVSSSCRFVI-YFQIMY 78 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~-~G~icl~~l~~~~~~~~W~p~~-i~~il~ 78 (95)
++|+++|.||++||||||.|+++|.||++||++||+|+|.|+||||||+. +|+||+++| .++|+|++ |++||+
T Consensus 51 ~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~~~~G~ICL~iL-----~~~WsP~~ti~~iL~ 125 (179)
T 2z5d_A 51 NEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVI-----NQTWTALYDLTNIFE 125 (179)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCHHHH-----HHHCCTTCCTTHHHH
T ss_pred ceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCCCCCCeEecccc-----ccCCCCCCCHHHHHH
Confidence 58999999999999999999999999999999999999999999999999 999999999 78899999 999999
Q ss_pred H-HHHhcC-CCcchhcc
Q 034433 79 G-SGLAKI-SSLDDMMA 93 (95)
Q Consensus 79 ~-i~~ll~-~~~~~~~~ 93 (95)
+ |+++|. .+++++++
T Consensus 126 s~I~~Ll~~Pn~~~p~n 142 (179)
T 2z5d_A 126 SFLPQLLAYPNPIDPLN 142 (179)
T ss_dssp THHHHHHHSCCCSSCSC
T ss_pred HHHHHHHhCCCCCCccC
Confidence 9 999875 56666653
No 45
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=99.97 E-value=3.2e-33 Score=187.58 Aligned_cols=88 Identities=26% Similarity=0.386 Sum_probs=80.9
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCC-CCcEEeccCCCCCCCCCCCHHH-HHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYP-SGTVCLSILNEDNVSSSCRFVI-YFQIMY 78 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~-~G~icl~~l~~~~~~~~W~p~~-i~~il~ 78 (95)
++|+++|.||++||||||.|+++|.||++||++||+|+|.|+||||||+. +|+||+++| .++|+|++ |++||+
T Consensus 38 ~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~~~G~iCl~iL-----~~~W~p~~~i~~vL~ 112 (171)
T 1yf9_A 38 AEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDERSGSVCLDVI-----NQTWTPMYQLENIFD 112 (171)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCHHHH-----HHHCCTTCCTHHHHH
T ss_pred eEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCcccCCeEecccc-----ccCCCCCCcHHHHHH
Confidence 58999999999999999999999999999999999999999999999995 999999999 78899999 999999
Q ss_pred HH-HHhcC-CCcchhcc
Q 034433 79 GS-GLAKI-SSLDDMMA 93 (95)
Q Consensus 79 ~i-~~ll~-~~~~~~~~ 93 (95)
+| ++||. .+++++++
T Consensus 113 sil~~ll~~Pn~~~p~n 129 (171)
T 1yf9_A 113 VFLPQLLRYPNPSDPLN 129 (171)
T ss_dssp THHHHHHHSCCSSCCSC
T ss_pred HHHHHHHhCCCCCCccc
Confidence 97 67775 56666553
No 46
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=99.97 E-value=6.3e-32 Score=183.89 Aligned_cols=86 Identities=28% Similarity=0.443 Sum_probs=80.5
Q ss_pred EEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCCCCcEEeccCCCCCCCCCCCHHH-HHHHHHHH
Q 034433 2 IWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYGS 80 (95)
Q Consensus 2 ~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~~G~icl~~l~~~~~~~~W~p~~-i~~il~~i 80 (95)
+|+++|. |++|||+||.|+++|.||++||++||+|+|.|+||||||+.+|+||+++| .++|+|++ |++||++|
T Consensus 65 ~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G~iCl~iL-----~~~W~p~~~i~~vL~~i 138 (190)
T 3o2u_A 65 KLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIFHPNIDLKGNVCLNIL-----REDWSPALDLQSIITGL 138 (190)
T ss_dssp EEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEECSCCCCTTBCTTSBBCCGGG-----TTTCCTTCCHHHHHHHH
T ss_pred eEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEecCcccCCCCCCCeEechhc-----cCCCCCCCCHHHHHHHH
Confidence 8999997 78899999999999999999999999999999999999999999999999 88999999 99999999
Q ss_pred HHhcC-CCcchhcc
Q 034433 81 GLAKI-SSLDDMMA 93 (95)
Q Consensus 81 ~~ll~-~~~~~~~~ 93 (95)
+++|. .+++++++
T Consensus 139 ~~ll~~pn~~~pln 152 (190)
T 3o2u_A 139 LFLFLEPNPNDPLN 152 (190)
T ss_dssp HHHHHSCCTTSCSS
T ss_pred HHHHhCCCCCcchh
Confidence 99875 66776654
No 47
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=99.97 E-value=2e-31 Score=197.87 Aligned_cols=88 Identities=31% Similarity=0.597 Sum_probs=83.1
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCCCCcEEeccCCCCCCCCCCCHHH-HHHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYG 79 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~~G~icl~~l~~~~~~~~W~p~~-i~~il~~ 79 (95)
++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+++|+||+++| .++|+|++ |++||++
T Consensus 33 ~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~il-----~~~W~p~~~i~~vL~~ 107 (399)
T 4ddg_A 33 FHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSISLDIL-----RSQWSPALTISKVLLS 107 (399)
T ss_dssp EEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBCTTCBBCCGGG-----TTSCCTTCCHHHHHHH
T ss_pred eEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccCCCCeEeCccc-----ccCCCccccHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999 88999999 9999999
Q ss_pred HHHhcC-CCcchhcc
Q 034433 80 SGLAKI-SSLDDMMA 93 (95)
Q Consensus 80 i~~ll~-~~~~~~~~ 93 (95)
|+++|. .+|+++++
T Consensus 108 i~~ll~~pnp~~p~n 122 (399)
T 4ddg_A 108 ICSLLCDPNPDDPLV 122 (399)
T ss_dssp HHHHHHSCCTTSCSS
T ss_pred HHHHHcCCCCCchhh
Confidence 999975 66777654
No 48
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=99.97 E-value=1.6e-31 Score=178.55 Aligned_cols=88 Identities=20% Similarity=0.369 Sum_probs=79.3
Q ss_pred CEEEEEEcCCCCCCCC--CCEEEEEEeCCCCCCCCCCeeeecccccccccCCCCcEEeccCCCCCCCCCCCHHH-HHHHH
Q 034433 1 MIWECIIPGKTGTDWE--GGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIM 77 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~ye--g~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~~G~icl~~l~~~~~~~~W~p~~-i~~il 77 (95)
++|+++|.||++|+|+ ||.|+++|.||++||++||+|+|.|++|||||+.+|+||+++| .++|+|++ +++++
T Consensus 50 ~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~il-----~~~W~p~~~i~~vl 124 (167)
T 4ds2_A 50 YNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHEPPTVRFVTPVYSPLVTGEGGICDRMV-----NDFWTPDQHASDVI 124 (167)
T ss_dssp TEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTSCCEEEESSCCCCSSCCTTSCCCTHHH-----HTTCCTTSCHHHHH
T ss_pred cEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCCCCEEEEeCCcccccCCCCCEEEcccC-----cCCCCCCCChHHHH
Confidence 5899999999999999 9999999999999999999999999999999999999999999 88999999 99865
Q ss_pred -HHHHHhcC---CCcchhcc
Q 034433 78 -YGSGLAKI---SSLDDMMA 93 (95)
Q Consensus 78 -~~i~~ll~---~~~~~~~~ 93 (95)
..|++++. .+++++++
T Consensus 125 l~~l~~l~~~~~pn~~~p~n 144 (167)
T 4ds2_A 125 KLVLDRVFSQYKSRRDDDVN 144 (167)
T ss_dssp HHHHHHHHTSTTSCCSCCCC
T ss_pred HHHHHHHHhcCCCCCcchHh
Confidence 45666665 46666654
No 49
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=99.96 E-value=1.7e-30 Score=188.32 Aligned_cols=92 Identities=29% Similarity=0.548 Sum_probs=81.6
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeeccc-----ccccccCCCCcEEeccCCCCCC--CCCCCHHH-
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQG-----FFHPNVYPSGTVCLSILNEDNV--SSSCRFVI- 72 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~-----i~hpnv~~~G~icl~~l~~~~~--~~~W~p~~- 72 (95)
++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+ ||||||+.+|+||+++|.++.+ .++|+|++
T Consensus 110 ~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g~~~ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~s 189 (323)
T 3ceg_A 110 DIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTS 189 (323)
T ss_dssp TEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTTTTCCCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTC
T ss_pred cccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCCCcccccCCCCcCCeEechhhccccCCCcCCCCcCcC
Confidence 479999999999999999999999999999999999999998 9999999999999999964322 26899997
Q ss_pred -HHHHHHHHHHhcC-CCc--chhc
Q 034433 73 -YFQIMYGSGLAKI-SSL--DDMM 92 (95)
Q Consensus 73 -i~~il~~i~~ll~-~~~--~~~~ 92 (95)
|++||++||+||. .+| ++++
T Consensus 190 tI~~VLlsIqsLL~~~~Pn~~dP~ 213 (323)
T 3ceg_A 190 SFLQVLVSVQSLILVAEPYFNEPG 213 (323)
T ss_dssp CHHHHHHHHHHHTSCSSGGGGSTT
T ss_pred CHHHHHHHHHHHHcCCCCCCCCcc
Confidence 9999999999985 333 5554
No 50
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.96 E-value=4e-30 Score=174.61 Aligned_cols=81 Identities=23% Similarity=0.406 Sum_probs=68.9
Q ss_pred CEEEEEEcCCCCCCCCCCEEEEEEeCCCCCCCCCCeeeecccccccccCCCCcEEeccCCCCCCCCCCCHHH-HHHHHHH
Q 034433 1 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYG 79 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~~G~icl~~l~~~~~~~~W~p~~-i~~il~~ 79 (95)
++|+++|.||++||||||.|+++|.||++||++||+|+|.|+ |||++++|+||+++|+.| .++|+|++ |++||++
T Consensus 44 ~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~~~~~G~ICL~iL~~~--~~~W~P~~ti~~vL~s 119 (187)
T 2f4w_A 44 LEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNTRLCLSITDFH--PDTWNPAWSVSTILTG 119 (187)
T ss_dssp EEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSSBCTTSCBC------------CCTTCCHHHHHHH
T ss_pred ceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--CceeccCCeEeeeccccC--ccCCCCcCcHHHHHHH
Confidence 479999999999999999999999999999999999999999 999999999999999654 57899999 9999999
Q ss_pred HHHhcC
Q 034433 80 SGLAKI 85 (95)
Q Consensus 80 i~~ll~ 85 (95)
|+++|.
T Consensus 120 i~sll~ 125 (187)
T 2f4w_A 120 LLSFMV 125 (187)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 999985
No 51
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=99.96 E-value=5.4e-31 Score=178.78 Aligned_cols=85 Identities=13% Similarity=0.303 Sum_probs=78.9
Q ss_pred CEEEEEEcCC-CCCCCCC-----------CEEEEEEeCCCCCCCCCCeeeeccccccc-ccCCCCcEEeccCCCCCCCCC
Q 034433 1 MIWECIIPGK-TGTDWEG-----------GYFPLTLYFSEDYPSKPPKCKFPQGFFHP-NVYPSGTVCLSILNEDNVSSS 67 (95)
Q Consensus 1 ~~W~~~i~Gp-~~t~yeg-----------~~~~~~i~f~~~yP~~pP~v~f~t~i~hp-nv~~~G~icl~~l~~~~~~~~ 67 (95)
++|+++|.|| ++|||+| |.|+++|.||++||++||+|+|.|+++|| ||+.+|+||+++|. .++
T Consensus 60 ~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~~PP~V~f~tpi~hPnnV~~~G~ICL~iL~----~~~ 135 (186)
T 1zuo_A 60 YDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPFVRVVLPVLSGGYVLGGGALCMELLT----KQG 135 (186)
T ss_dssp EEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTSSCCEEEEEESCEESTTBCGGGBBCCGGGS----TTT
T ss_pred ceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCCCCCCeEEEeCCccCCCccCCCCcEEeccCC----CCC
Confidence 4799999998 9999998 89999999999999999999999999999 69999999999994 478
Q ss_pred CCHHH-HHHHHHHHHHhcCCCcc
Q 034433 68 CRFVI-YFQIMYGSGLAKISSLD 89 (95)
Q Consensus 68 W~p~~-i~~il~~i~~ll~~~~~ 89 (95)
|+|++ |++||++|+++|.++..
T Consensus 136 WsP~~ti~~VL~sI~slL~~p~a 158 (186)
T 1zuo_A 136 WSSAYSIESVIMQINATLVKGKA 158 (186)
T ss_dssp CCTTSCHHHHHHHHHHHHHHTTC
T ss_pred CCCcCcHHHHHHHHHHHHcCCCh
Confidence 99999 99999999999875443
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.88 E-value=3.8e-24 Score=142.33 Aligned_cols=73 Identities=22% Similarity=0.374 Sum_probs=66.7
Q ss_pred CEEEEEEcCCCCCCCCCC----------EEEEEEeCCCCCCCCCCeeeeccc-ccccccCCCCcEEeccCCCCCCCC---
Q 034433 1 MIWECIIPGKTGTDWEGG----------YFPLTLYFSEDYPSKPPKCKFPQG-FFHPNVYPSGTVCLSILNEDNVSS--- 66 (95)
Q Consensus 1 ~~W~~~i~Gp~~t~yeg~----------~~~~~i~f~~~yP~~pP~v~f~t~-i~hpnv~~~G~icl~~l~~~~~~~--- 66 (95)
++|.+++.||+||+|||| .|++++.||++||.+||+|+|.++ ++|||||.+|+|||+++. ..
T Consensus 56 ~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~~~~~~hpnmY~~G~ICLdIL~----kp~Ws 131 (172)
T 2z6o_A 56 NDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPELDGKTAKMYRGGKICLTDHF----KPLWA 131 (172)
T ss_dssp CCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGGTTTCSSBCTTSBBCCCTTH----HHHHH
T ss_pred ceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeCCCCCCCCCCCCCCcEechhhc----ccccc
Confidence 479999999999999999 999999999999999999999998 999999999999999993 32
Q ss_pred CCCHHH-HHHHH
Q 034433 67 SCRFVI-YFQIM 77 (95)
Q Consensus 67 ~W~p~~-i~~il 77 (95)
.|+|++ |..+|
T Consensus 132 ~~~P~~~IahiL 143 (172)
T 2z6o_A 132 RNVPKFGLAHLM 143 (172)
T ss_dssp HHTTSCCHHHHH
T ss_pred ccCCccCHHHHH
Confidence 455999 88886
No 53
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.72 E-value=2.3e-18 Score=112.80 Aligned_cols=63 Identities=22% Similarity=0.478 Sum_probs=60.2
Q ss_pred EEEEEEcCCCCCCCCCC----------EEEEEEeCCCCCCCCCCeeeeccc-ccccccCCCCcEEeccCCCCCCCCCCCH
Q 034433 2 IWECIIPGKTGTDWEGG----------YFPLTLYFSEDYPSKPPKCKFPQG-FFHPNVYPSGTVCLSILNEDNVSSSCRF 70 (95)
Q Consensus 2 ~W~~~i~Gp~~t~yeg~----------~~~~~i~f~~~yP~~pP~v~f~t~-i~hpnv~~~G~icl~~l~~~~~~~~W~p 70 (95)
+|...+.|++||+|+|+ .|++.+.||.+||..||+|+|.+. .+|||+|.+|+|||+++ |+|
T Consensus 59 dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp~ldgkt~kmYr~GkICLdIh--------wkP 130 (168)
T 3kpa_A 59 HWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALPELEGKTVKMYRGGKICMTTH--------FFP 130 (168)
T ss_dssp CCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGGTTTCSSEETTTEECCCTT--------HHH
T ss_pred CeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecccccCcCccccCCCcEEeccc--------cch
Confidence 59999999999999999 999999999999999999999995 89999999999999987 999
Q ss_pred HH
Q 034433 71 VI 72 (95)
Q Consensus 71 ~~ 72 (95)
.+
T Consensus 131 lW 132 (168)
T 3kpa_A 131 LW 132 (168)
T ss_dssp HH
T ss_pred hh
Confidence 87
No 54
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.72 E-value=5.6e-18 Score=112.60 Aligned_cols=79 Identities=18% Similarity=0.212 Sum_probs=68.3
Q ss_pred EEEEEcCCCCCCCCCCE---EEEEEeCCCCCCCCCCeeeecc-------c---cc-ccccCCCCcEEeccCCCCCCCCCC
Q 034433 3 WECIIPGKTGTDWEGGY---FPLTLYFSEDYPSKPPKCKFPQ-------G---FF-HPNVYPSGTVCLSILNEDNVSSSC 68 (95)
Q Consensus 3 W~~~i~Gp~~t~yeg~~---~~~~i~f~~~yP~~pP~v~f~t-------~---i~-hpnv~~~G~icl~~l~~~~~~~~W 68 (95)
+-+.+.|.-.++|+|+. |.+.|.||++||++||.|.|.+ + |+ |||||.+|+||++.| . +|
T Consensus 63 ~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~~~~~~I~~hpnVD~~G~I~lpyL-----~-~W 136 (162)
T 3r3q_A 63 LLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMNTISSSLPIQEYIDSNGWIALPIL-----H-AW 136 (162)
T ss_dssp EEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTTTSCTTSTHHHHBCTTSBBCCGGG-----G-SC
T ss_pred eEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCccccccccccCCCCCCCCCCcEeCccc-----c-cC
Confidence 45677788889999998 8899999999999999997754 1 77 999999999999999 4 49
Q ss_pred CH-HH-HHHHHHHHHHhcCCC
Q 034433 69 RF-VI-YFQIMYGSGLAKISS 87 (95)
Q Consensus 69 ~p-~~-i~~il~~i~~ll~~~ 87 (95)
++ +. +.++|.+|+++|..+
T Consensus 137 ~p~~s~L~~ll~~l~~lf~ep 157 (162)
T 3r3q_A 137 DPAAMNLIMVVQELMSLLHEP 157 (162)
T ss_dssp CGGGCCHHHHHHHHHHTTSCC
T ss_pred CCCcCcHHHHHHHHHHHhcCC
Confidence 99 45 999999999998743
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.52 E-value=5.7e-15 Score=96.63 Aligned_cols=74 Identities=19% Similarity=0.345 Sum_probs=63.1
Q ss_pred EEEEEEcCCCCCCCCCCEEE--EEEeCCCCCCCCCCeeeeccc------ccccccCCCCcEEeccCCCCCCCCCCCH-HH
Q 034433 2 IWECIIPGKTGTDWEGGYFP--LTLYFSEDYPSKPPKCKFPQG------FFHPNVYPSGTVCLSILNEDNVSSSCRF-VI 72 (95)
Q Consensus 2 ~W~~~i~Gp~~t~yeg~~~~--~~i~f~~~yP~~pP~v~f~t~------i~hpnv~~~G~icl~~l~~~~~~~~W~p-~~ 72 (95)
.|.++|. .+|+|+.|. +.|-+|++||++||.| |.++ ..|+|||.+|++|++.| .+ |++ ..
T Consensus 55 ~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~~G~i~lpyL-----~~-W~~~~s 123 (146)
T 3obq_A 55 NLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDANGKIYLPYL-----HE-WKHPQS 123 (146)
T ss_dssp EEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCTTCBBCCHHH-----HT-CCTTTC
T ss_pred EEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCCCCCEecccc-----cc-cCCCCC
Confidence 4666666 689999998 4899999999999999 7766 58999999999999999 44 987 55
Q ss_pred -HHHHHHHHHHhcCC
Q 034433 73 -YFQIMYGSGLAKIS 86 (95)
Q Consensus 73 -i~~il~~i~~ll~~ 86 (95)
+.+++..+++.|..
T Consensus 124 nL~~ll~~l~~~F~~ 138 (146)
T 3obq_A 124 DLLGLIQVMIVVFGD 138 (146)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhh
Confidence 99999999998753
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.02 E-value=0.041 Score=33.89 Aligned_cols=25 Identities=24% Similarity=0.380 Sum_probs=21.1
Q ss_pred CCEEEEEEeCCCCCCCCCCeeeecc
Q 034433 17 GGYFPLTLYFSEDYPSKPPKCKFPQ 41 (95)
Q Consensus 17 g~~~~~~i~f~~~yP~~pP~v~f~t 41 (95)
.-.+.+.+.+|.+||.+||.+...+
T Consensus 54 ~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 54 TVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp CCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred ceeEEEEEEeCCCCCCCCceEEEEc
Confidence 3467899999999999999987654
No 57
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=93.62 E-value=0.2 Score=31.13 Aligned_cols=24 Identities=21% Similarity=0.454 Sum_probs=20.8
Q ss_pred CEEEEEEeCCCCCCCCCCeeeecc
Q 034433 18 GYFPLTLYFSEDYPSKPPKCKFPQ 41 (95)
Q Consensus 18 ~~~~~~i~f~~~yP~~pP~v~f~t 41 (95)
-...+.+.+|.+||..+|.|...+
T Consensus 62 ~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 62 SSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp CEEEEEEECCSSTTSSCCEEEEEC
T ss_pred eEEEEEEECCCCCCCCCCeEEEec
Confidence 467889999999999999998754
No 58
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=92.74 E-value=0.31 Score=29.82 Aligned_cols=24 Identities=25% Similarity=0.505 Sum_probs=20.9
Q ss_pred CEEEEEEeCCCCCCCCCCeeeecc
Q 034433 18 GYFPLTLYFSEDYPSKPPKCKFPQ 41 (95)
Q Consensus 18 ~~~~~~i~f~~~yP~~pP~v~f~t 41 (95)
-.+.+.+.+|++||..+|.+...+
T Consensus 59 ~~~~L~~~~p~~YP~~~P~i~~~~ 82 (128)
T 2day_A 59 VCFTLVLQVPAEYPHEVPQISIRN 82 (128)
T ss_dssp CEEEEEEEECSSTTSSCCEEEEEE
T ss_pred eeEEEEEEcCCCCCCCCCCeEEEc
Confidence 467889999999999999998665
No 59
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.65 E-value=0.48 Score=28.99 Aligned_cols=23 Identities=22% Similarity=0.270 Sum_probs=20.0
Q ss_pred CEEEEEEeCCCCCCCCCCeeeec
Q 034433 18 GYFPLTLYFSEDYPSKPPKCKFP 40 (95)
Q Consensus 18 ~~~~~~i~f~~~yP~~pP~v~f~ 40 (95)
-.+.+.+.+|.+||..+|.+...
T Consensus 56 ~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 56 IPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp CEEEEEEEECSSTTSSCCCCCCC
T ss_pred eEEEEEEECCCCCCCCCCeEEEE
Confidence 46889999999999999998755
No 60
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=91.35 E-value=0.14 Score=31.79 Aligned_cols=23 Identities=17% Similarity=0.280 Sum_probs=20.1
Q ss_pred CEEEEEEeCCCCCCCCCCeeeec
Q 034433 18 GYFPLTLYFSEDYPSKPPKCKFP 40 (95)
Q Consensus 18 ~~~~~~i~f~~~yP~~pP~v~f~ 40 (95)
-.+.+.+.+|.+||..+|.|...
T Consensus 63 ~~~~L~v~~p~~YP~~~P~i~l~ 85 (137)
T 1ukx_A 63 VQVELRVKCPPTYPDVVPEIDLK 85 (137)
T ss_dssp CEEEEEECCCTTTTSSCCCCEEE
T ss_pred eEEEEEEECCCCCCCCCCcEEEe
Confidence 46889999999999999999764
No 61
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=89.06 E-value=0.27 Score=31.17 Aligned_cols=24 Identities=21% Similarity=0.348 Sum_probs=20.6
Q ss_pred EEEEEEeCCCCCCCCCCeeeeccc
Q 034433 19 YFPLTLYFSEDYPSKPPKCKFPQG 42 (95)
Q Consensus 19 ~~~~~i~f~~~yP~~pP~v~f~t~ 42 (95)
.+.+.+.+|.+||..||.+.....
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEECT
T ss_pred eEEEEEECCCCCCCCCCeEEEEcc
Confidence 578899999999999999976654
No 62
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=87.79 E-value=0.46 Score=30.34 Aligned_cols=23 Identities=13% Similarity=0.077 Sum_probs=20.4
Q ss_pred EEEEEEeCCCCCCCCCCeeeecc
Q 034433 19 YFPLTLYFSEDYPSKPPKCKFPQ 41 (95)
Q Consensus 19 ~~~~~i~f~~~yP~~pP~v~f~t 41 (95)
.+.+++.+|.+||..+|.+.-.+
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~ 98 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRS 98 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEEC
T ss_pred eEEEEEEcCCCCCCCCCcEEEEe
Confidence 78899999999999999997554
No 63
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=85.96 E-value=1.9 Score=28.68 Aligned_cols=49 Identities=20% Similarity=0.149 Sum_probs=33.2
Q ss_pred CCEEEEEEeCCCCCCCCCCeeeecccccccccCCCCcEEeccCCCCCCCCCCCHHH-HHHHHHHHHHhc
Q 034433 17 GGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAK 84 (95)
Q Consensus 17 g~~~~~~i~f~~~yP~~pP~v~f~t~i~hpnv~~~G~icl~~l~~~~~~~~W~p~~-i~~il~~i~~ll 84 (95)
|....+++.++.+||.++|.+..--|. |. .-.|++.. +..++.+.+.++
T Consensus 37 gR~H~l~v~l~~~yp~~~P~~~~DlP~--~~-----------------~~~w~~~ssL~~v~~qF~~~L 86 (186)
T 3zqs_A 37 GREHLITLKLKAKYPAESPDYFVDFPV--PF-----------------CASWTPQSSLISIYSQFLAAI 86 (186)
T ss_dssp SCEEEEEEECCTTTTTSCCEEECCCSS--CC-----------------CCCCCTTCCHHHHHHHHHHHH
T ss_pred CCeEEEEEEECCCCCCCCCeeEEcCCC--Cc-----------------ccccCCCccHHHHHHHHHHHH
Confidence 677889999999999999987654442 11 22366666 666666555544
No 64
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=43.32 E-value=54 Score=21.44 Aligned_cols=31 Identities=16% Similarity=0.400 Sum_probs=25.1
Q ss_pred EEEEEEcCCCCCCCCCCEEEEEEeCCCCCCC
Q 034433 2 IWECIIPGKTGTDWEGGYFPLTLYFSEDYPS 32 (95)
Q Consensus 2 ~W~~~i~Gp~~t~yeg~~~~~~i~f~~~yP~ 32 (95)
+|.+.+.|+.+.--..-+=++.+.+.+.||.
T Consensus 34 ~WtVyVr~~~~edis~~v~KV~F~LHpSF~n 64 (175)
T 3rls_A 34 LWTIFVRGPQNEDISYFIKKVVFKLHDTYPN 64 (175)
T ss_dssp EEEEEEECGGGCCCTTTEEEEEEECCTTSSS
T ss_pred EEEEEEECCCCCChhheEEEEEEEcCCCCCC
Confidence 6999999988754445677899999999975
No 65
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=41.73 E-value=22 Score=23.77 Aligned_cols=25 Identities=12% Similarity=0.343 Sum_probs=21.3
Q ss_pred CCCEEEEEEeCCCCCCC-----CCCeeeec
Q 034433 16 EGGYFPLTLYFSEDYPS-----KPPKCKFP 40 (95)
Q Consensus 16 eg~~~~~~i~f~~~yP~-----~pP~v~f~ 40 (95)
+.|.|.|+-..|--||. +||.|+|.
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~ 138 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLI 138 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEE
Confidence 46899999999999998 78887766
No 66
>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A
Probab=30.81 E-value=1e+02 Score=19.39 Aligned_cols=39 Identities=10% Similarity=0.312 Sum_probs=29.6
Q ss_pred EEE--EEEcCCCCCCCC-CCEEEEEEeCCCCCCCCCCeeeeccc
Q 034433 2 IWE--CIIPGKTGTDWE-GGYFPLTLYFSEDYPSKPPKCKFPQG 42 (95)
Q Consensus 2 ~W~--~~i~Gp~~t~ye-g~~~~~~i~f~~~yP~~pP~v~f~t~ 42 (95)
+|. +.+.|+.|..-. .-+=++...+.+.|+. |...+..+
T Consensus 34 ~WtieV~vr~~~g~ei~~~~i~kV~f~LH~sF~n--p~r~v~~p 75 (140)
T 3qrl_A 34 QWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFAN--PNRTFTDP 75 (140)
T ss_dssp EEEEEEEEECTTSCEECCTTEEEEEEECCTTSSS--CEEEECST
T ss_pred EeeEEEEEeCCCCCcCchheEEEEEEEeCCCCCC--CeEEEcCC
Confidence 587 899999988664 4667788999999874 66665554
No 67
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=24.91 E-value=35 Score=23.36 Aligned_cols=26 Identities=23% Similarity=0.575 Sum_probs=21.7
Q ss_pred CCCEEEEEEeCCCCCC-------CCCCeeeecc
Q 034433 16 EGGYFPLTLYFSEDYP-------SKPPKCKFPQ 41 (95)
Q Consensus 16 eg~~~~~~i~f~~~yP-------~~pP~v~f~t 41 (95)
+.|.|.|+-.+|--|| ..||.|+|.-
T Consensus 134 ~~G~y~F~TI~Pg~Yp~~~~~~~~RpaHIH~~V 166 (241)
T 2bum_B 134 DNGYYVFRTIKPGPYPWRNRINEWRPAHIHFSL 166 (241)
T ss_dssp TTSEEEEEEECCCCEEESSSTTEEECSEEEEEE
T ss_pred CCceEEEEEecCCccccCCCCCCCcCceEEEEE
Confidence 4699999999999998 4788888763
No 68
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=23.32 E-value=38 Score=23.91 Aligned_cols=25 Identities=16% Similarity=0.312 Sum_probs=21.0
Q ss_pred CCCEEEEEEeCCCCCC------------------CCCCeeeec
Q 034433 16 EGGYFPLTLYFSEDYP------------------SKPPKCKFP 40 (95)
Q Consensus 16 eg~~~~~~i~f~~~yP------------------~~pP~v~f~ 40 (95)
+.|.|.|+-..|--|| .+||.|+|.
T Consensus 183 ~~G~y~F~TI~Pg~Yp~p~dGp~G~ll~~~grh~~RpaHIHf~ 225 (293)
T 1tmx_A 183 PDGGYAFWAITPTPYPIPHDGPVGRMLAATGRSPMRASHLHFM 225 (293)
T ss_dssp TTSEEEEEEECCCCEECCCSSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CCceEEEEEECCCcccCCCCCchHHHHHhcccCCCCCceEEEE
Confidence 4689999999999998 458888776
No 69
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=23.12 E-value=39 Score=24.11 Aligned_cols=25 Identities=12% Similarity=0.283 Sum_probs=21.1
Q ss_pred CCCEEEEEEeCCCCCC------------------CCCCeeeec
Q 034433 16 EGGYFPLTLYFSEDYP------------------SKPPKCKFP 40 (95)
Q Consensus 16 eg~~~~~~i~f~~~yP------------------~~pP~v~f~ 40 (95)
+.|.|.|+-..|--|| .+||.|.|.
T Consensus 187 ~~G~y~F~TI~Pg~Y~ip~dGp~G~lL~~~grh~~RpaHIH~~ 229 (312)
T 2xsu_A 187 VNGKYVALTTMPVGYGCPPEGTTQALLNKLGRHGNRPSHVHYF 229 (312)
T ss_dssp TTSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CCceEEEEEECcCcccCCCCCcHHHHHHHhhccCCCCceEEEE
Confidence 4699999999999998 568888776
No 70
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=22.78 E-value=39 Score=24.05 Aligned_cols=25 Identities=16% Similarity=0.351 Sum_probs=21.3
Q ss_pred CCCEEEEEEeCCCCCC------------------CCCCeeeec
Q 034433 16 EGGYFPLTLYFSEDYP------------------SKPPKCKFP 40 (95)
Q Consensus 16 eg~~~~~~i~f~~~yP------------------~~pP~v~f~ 40 (95)
+.|.|.|+-..|--|| .+||.|+|.
T Consensus 183 ~~G~y~F~TI~Pg~Y~~p~dGp~g~lL~~~grh~~RpaHIHf~ 225 (311)
T 2azq_A 183 AEGRYRARSIVPSGYGCDPQGPTQECLDLLGRHGQRPAHVHFF 225 (311)
T ss_dssp TTCEEEEEEECCCCEECCTTSHHHHHHHHHTCCCEECCEEEEE
T ss_pred CCceEEEEEEcCCCcCCCCCCcHHHHHHhhhccCCCCceEEEE
Confidence 4699999999999998 568898886
No 71
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=22.45 E-value=42 Score=22.97 Aligned_cols=25 Identities=20% Similarity=0.416 Sum_probs=21.5
Q ss_pred CCCEEEEEEeCCCCCCC-------CCCeeeec
Q 034433 16 EGGYFPLTLYFSEDYPS-------KPPKCKFP 40 (95)
Q Consensus 16 eg~~~~~~i~f~~~yP~-------~pP~v~f~ 40 (95)
+.|.|.|+-.+|--||. +||.|+|.
T Consensus 133 ~~G~y~F~TI~Pg~Yp~p~~~~~~Rp~HIHf~ 164 (238)
T 3t63_M 133 SDGYYSFRTIKPGPAPWRNGPNDWRPAHIYFG 164 (238)
T ss_dssp TTSEEEEEEECCCCEEESSSTTEEECSEEEEE
T ss_pred CCceEEEEEECCcCccCCCCCCCCcCCeEEEE
Confidence 36999999999999986 78888776
No 72
>2jrw_A Cyclic extended PEP.1; acetylcholine receptor, phage display, peptide cyclization, immune system; NMR {Synthetic}
Probab=22.13 E-value=50 Score=14.43 Aligned_cols=16 Identities=31% Similarity=0.665 Sum_probs=8.7
Q ss_pred CCCCCeeeeccccccc
Q 034433 31 PSKPPKCKFPQGFFHP 46 (95)
Q Consensus 31 P~~pP~v~f~t~i~hp 46 (95)
|..-|.-.|....|||
T Consensus 4 pmtlpenyfserpyhp 19 (26)
T 2jrw_A 4 PMTLPENYFSERPYHP 19 (26)
T ss_dssp CCCCSSSSCCSSSCCS
T ss_pred ccccchhhcccCCCCC
Confidence 3344455566666775
No 73
>3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida}
Probab=21.90 E-value=42 Score=23.64 Aligned_cols=25 Identities=24% Similarity=0.506 Sum_probs=21.0
Q ss_pred CCCEEEEEEeCCCCCCC------------------CCCeeeec
Q 034433 16 EGGYFPLTLYFSEDYPS------------------KPPKCKFP 40 (95)
Q Consensus 16 eg~~~~~~i~f~~~yP~------------------~pP~v~f~ 40 (95)
+.|.|.|+-.+|--||. +||.|+|.
T Consensus 180 ~~G~y~F~TI~Pg~Yp~p~dGp~G~ll~~~grh~~RpaHIHf~ 222 (290)
T 3n9t_A 180 NDGCFAIQTTVPVCYPIPTDGPVGEMLDAANRHAWRPAHLHFM 222 (290)
T ss_dssp TTSEEEEEEECCCCEECCCSSHHHHHHHHHTCCCEECCEEEEE
T ss_pred CCceEEEEEeCCCCcCCCCCCcHHHHHHhccCCCCcCceEEEE
Confidence 46999999999999983 68888776
No 74
>2k6w_A Putative uncharacterized protein TTHA1943; PCUA, copper transfer protein, metal transport; NMR {Thermus thermophilus} PDB: 2k6y_A 2k6z_A 2k70_A
Probab=21.62 E-value=93 Score=18.72 Aligned_cols=27 Identities=19% Similarity=0.261 Sum_probs=22.6
Q ss_pred EEEEEcCCCCCCCCCCEEEEEEeCCCC
Q 034433 3 WECIIPGKTGTDWEGGYFPLTLYFSED 29 (95)
Q Consensus 3 W~~~i~Gp~~t~yeg~~~~~~i~f~~~ 29 (95)
.|+.+.|.+..+=+|..+.++|.|-+.
T Consensus 82 ~HvML~gl~~~l~~G~~v~ltL~Fe~~ 108 (120)
T 2k6w_A 82 YHFMLLGLKRPLKAGEEVELDLLFAGG 108 (120)
T ss_dssp EEEEEEEESSCBCTTCEEEEEEEETTT
T ss_pred eEEEEeCCCCCCCCCCEEEEEEEECCC
Confidence 478888988888899999999998754
No 75
>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...
Probab=21.62 E-value=51 Score=21.86 Aligned_cols=23 Identities=13% Similarity=0.153 Sum_probs=20.0
Q ss_pred CEEEEEEeCCCCCCCC-----CCeeeec
Q 034433 18 GYFPLTLYFSEDYPSK-----PPKCKFP 40 (95)
Q Consensus 18 ~~~~~~i~f~~~yP~~-----pP~v~f~ 40 (95)
|.|.|+-..|--||.. ||.|+|.
T Consensus 102 G~~~F~TI~Pg~Y~~~~g~~rp~HIH~~ 129 (200)
T 3t63_A 102 GEWTLHTVKPGVVNNAAGVPMAPHINIS 129 (200)
T ss_dssp CSEEEEEECCCCEECTTSCEECSCEEEE
T ss_pred CEEEEEEECCcCcCCCCCCccCCEEEEE
Confidence 8999999999999987 7777665
No 76
>1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A*
Probab=20.78 E-value=46 Score=23.67 Aligned_cols=24 Identities=13% Similarity=0.427 Sum_probs=20.6
Q ss_pred CCEEEEEEeCCCCCC------------------CCCCeeeec
Q 034433 17 GGYFPLTLYFSEDYP------------------SKPPKCKFP 40 (95)
Q Consensus 17 g~~~~~~i~f~~~yP------------------~~pP~v~f~ 40 (95)
.|.|.|+-..|--|| .+||.|+|.
T Consensus 187 ~G~y~F~TI~Pg~Yp~p~dgp~g~lL~~~grh~~RpaHIHf~ 228 (311)
T 1dmh_A 187 NGQYRVRTILPAGYGCPPEGPTQQLLNQLGRHGNRPAHIHYF 228 (311)
T ss_dssp TSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECSEEEEE
T ss_pred CceEEEEEEcCCcccCCCCCcHHHHHHhcccCCCCCceEEEE
Confidence 599999999999997 468888876
No 77
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=20.77 E-value=47 Score=22.92 Aligned_cols=25 Identities=24% Similarity=0.438 Sum_probs=20.3
Q ss_pred CCCEEEEEEeCCCCCC------------------CCCCeeeec
Q 034433 16 EGGYFPLTLYFSEDYP------------------SKPPKCKFP 40 (95)
Q Consensus 16 eg~~~~~~i~f~~~yP------------------~~pP~v~f~ 40 (95)
+.|.|.|+-..|-.|| .+||.|+|.
T Consensus 153 ~~G~y~F~TI~Pg~Y~~p~dGp~G~ll~~~grh~~RpaHIH~~ 195 (254)
T 2boy_A 153 ENGRFTLRTIVPAPYEIPKNGPTGALLAAAGWHAWRPAHLHWI 195 (254)
T ss_dssp TTSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CCceEEEEEECCccccCCCCCcHHHHHHhcccccCCCceEEEE
Confidence 3599999999999886 467888776
Done!