BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034437
MALNNGIRSVSKLLASSQSLVPSSVNRAFHSTGVKRMGGHGHDEPYYLHAKHMYNLDRMK
HQGLKMSLAVFSAFSIGVGVPIYAVIFQQRKTASG

High Scoring Gene Products

Symbol, full name Information P value
AT1G72020 protein from Arabidopsis thaliana 8.5e-33

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034437
        (95 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2030311 - symbol:AT1G72020 "AT1G72020" species...   358  8.5e-33   1


>TAIR|locus:2030311 [details] [associations]
            symbol:AT1G72020 "AT1G72020" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=RCA] [GO:0009853
            "photorespiration" evidence=RCA] [GO:0051788 "response to misfolded
            protein" evidence=RCA] [GO:0080129 "proteasome core complex
            assembly" evidence=RCA] EMBL:CP002684 EMBL:AC069273 EMBL:AY072449
            EMBL:AY128915 IPI:IPI00537201 PIR:C96743 RefSeq:NP_565031.1
            UniGene:At.43770 STRING:Q9C7G5 PRIDE:Q9C7G5
            EnsemblPlants:AT1G72020.1 GeneID:843533 KEGG:ath:AT1G72020
            TAIR:At1g72020 InParanoid:Q9C7G5 OMA:EYYLHAK PhylomeDB:Q9C7G5
            ProtClustDB:CLSN2689153 ArrayExpress:Q9C7G5 Genevestigator:Q9C7G5
            Uniprot:Q9C7G5
        Length = 97

 Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
 Identities = 71/97 (73%), Positives = 83/97 (85%)

Query:     1 MALNNGIRSVSKLLASSQSLVPSSVNRAFHSTGVKRM--GGHGHDEPYYLHAKHMYNLDR 58
             MAL+  IRSVSK++ASS++ V  SV R+FHSTGVK+M  GGHG  + YYLHAKHMYNLDR
Sbjct:     1 MALSTSIRSVSKIIASSEASVSRSVTRSFHSTGVKKMSGGGHGGYDEYYLHAKHMYNLDR 60

Query:    59 MKHQGLKMSLAVFSAFSIGVGVPIYAVIFQQRKTASG 95
             MK+Q LKMSL VF+AFSIGVGVPI+AV+FQQRKT SG
Sbjct:    61 MKYQALKMSLGVFTAFSIGVGVPIFAVVFQQRKTQSG 97


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.132   0.380    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       95        95   0.00091  102 3  11 22  0.47    29
                                                     29  0.43    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  455 (48 KB)
  Total size of DFA:  90 KB (2069 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.12u 0.10s 10.22t   Elapsed:  00:00:00
  Total cpu time:  10.12u 0.10s 10.22t   Elapsed:  00:00:00
  Start:  Thu May  9 15:18:54 2013   End:  Thu May  9 15:18:54 2013

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