BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034447
(94 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255576798|ref|XP_002529286.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531275|gb|EEF33118.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 60/85 (70%), Positives = 73/85 (85%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
MQQH K S+SSY+SY+KF+GK+ N KALEIYNSI DES K NVFICN +LSCLVR+GKF
Sbjct: 138 MQQHSKISVSSYTSYMKFMGKSLNPAKALEIYNSIADESVKNNVFICNSVLSCLVRSGKF 197
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+ SLKLF K+KQ+GLTPD +TY+T+
Sbjct: 198 DISLKLFHKMKQNGLTPDTITYSTL 222
>gi|359486048|ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic [Vitis vinifera]
gi|298204537|emb|CBI23812.3| unnamed protein product [Vitis vinifera]
Length = 659
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 72/85 (84%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
MQ+H K + SSYS+YIKF+GK+ N +KALEIYNSI DES + NV +CN +LSCL+RNGKF
Sbjct: 127 MQKHEKITFSSYSTYIKFMGKSLNPIKALEIYNSIQDESVRNNVSVCNSVLSCLIRNGKF 186
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
E+SLKLF ++KQ GL PDAVTY+T+
Sbjct: 187 ENSLKLFHQMKQDGLRPDAVTYSTL 211
>gi|1931651|gb|AAB65486.1| membrane-associated salt-inducible protein isolog; 88078-84012
[Arabidopsis thaliana]
Length = 652
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 69/85 (81%), Gaps = 1/85 (1%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
MQQHGK S+S+YSS IKF+G N KALEIY SI DES K+NV+ICN ILSCLV+NGK
Sbjct: 124 MQQHGKISVSTYSSCIKFVGAK-NVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKL 182
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+S +KLFD++K+ GL PD VTYNT+
Sbjct: 183 DSCIKLFDQMKRDGLKPDVVTYNTL 207
>gi|145335386|ref|NP_172560.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242678|sp|Q0WVV0.1|PPR31_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g10910, chloroplastic; Flags: Precursor
gi|110741600|dbj|BAE98748.1| membrane-associated salt-inducible protein isolog [Arabidopsis
thaliana]
gi|332190541|gb|AEE28662.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 664
Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 69/85 (81%), Gaps = 1/85 (1%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
MQQHGK S+S+YSS IKF+G N KALEIY SI DES K+NV+ICN ILSCLV+NGK
Sbjct: 124 MQQHGKISVSTYSSCIKFVGAK-NVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKL 182
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+S +KLFD++K+ GL PD VTYNT+
Sbjct: 183 DSCIKLFDQMKRDGLKPDVVTYNTL 207
>gi|297843920|ref|XP_002889841.1| hypothetical protein ARALYDRAFT_888388 [Arabidopsis lyrata subsp.
lyrata]
gi|297335683|gb|EFH66100.1| hypothetical protein ARALYDRAFT_888388 [Arabidopsis lyrata subsp.
lyrata]
Length = 665
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 69/85 (81%), Gaps = 1/85 (1%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
MQQHGK S+S+YSS IKF+G N KALEIY SI DES K+NV+ICN ILSCLV+NGK
Sbjct: 125 MQQHGKISVSTYSSCIKFVGAK-NVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKL 183
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+S +KLFD++K+ GL PD +TYNT+
Sbjct: 184 DSCIKLFDQMKRGGLKPDVITYNTL 208
>gi|449446895|ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Cucumis sativus]
Length = 668
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 71/85 (83%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
MQ+ GKT++SSYSSYIKF+G+ N LKALE+YN+I + S K ++FICN IL+CLVRNGKF
Sbjct: 129 MQETGKTNVSSYSSYIKFMGRGLNPLKALEVYNNIEEVSIKNSIFICNSILNCLVRNGKF 188
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
++S+KLF ++K GL PD VTY+T+
Sbjct: 189 DTSVKLFHQMKNDGLCPDTVTYSTM 213
>gi|224058965|ref|XP_002299667.1| predicted protein [Populus trichocarpa]
gi|222846925|gb|EEE84472.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 69/85 (81%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
MQ+H K S SSYSSYIKF+G + N KALEIY+SI DES K NVFICN +L CLVRN KF
Sbjct: 30 MQRHNKISASSYSSYIKFMGTSLNPAKALEIYHSIPDESTKTNVFICNSLLRCLVRNTKF 89
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+SS+K F K+K +GLTPDA+TY+T+
Sbjct: 90 DSSMKFFHKMKNNGLTPDAITYSTL 114
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SYS I + G +A E+ + DK +V I N IL R G+ ES ++ K+
Sbjct: 286 SYSIMISSFCRGGLFEEAKELAEEFEAKYDKYDVVILNTILCAYCRTGEKESVMRTMRKM 345
Query: 71 KQSGLTPDAVTYNTVY 86
+ ++PD YNT +
Sbjct: 346 DELAISPD---YNTFH 358
>gi|357135236|ref|XP_003569217.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Brachypodium distachyon]
Length = 644
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 67/85 (78%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
MQ+H +++SYSSY K+LG + N+ +AL++Y SI D+S +V+V +CN +L CLV+NG++
Sbjct: 105 MQEHEMLNVASYSSYFKYLGLSRNAARALQVYGSIQDQSIRVHVSVCNSVLGCLVKNGRY 164
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+S+ KL+D++ + GL+PD TY+T+
Sbjct: 165 DSTFKLYDEMIRGGLSPDLFTYSTL 189
>gi|218188463|gb|EEC70890.1| hypothetical protein OsI_02428 [Oryza sativa Indica Group]
Length = 647
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 40/85 (47%), Positives = 64/85 (75%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
MQ+H +I+SYSSY KFLG + N +AL++Y +I + +++V +CN +L CLV+NG+F
Sbjct: 111 MQEHDMLNIASYSSYFKFLGLSRNPARALQVYGAIRENPTRIHVSVCNSVLGCLVKNGRF 170
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+SS KL+D++ + GL+PD TY+T+
Sbjct: 171 DSSFKLYDEMIREGLSPDLFTYSTL 195
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVY 86
KA E + + DE K N+F + +L+ N +E + L ++ SGLTP+ V T+
Sbjct: 243 KAEEYFQKMKDEGHKPNLFHYSSLLNAYSENANYEKADLLMKDLRSSGLTPNKVILTTLL 302
Query: 87 Q 87
+
Sbjct: 303 K 303
>gi|297597021|ref|NP_001043343.2| Os01g0559500 [Oryza sativa Japonica Group]
gi|255673364|dbj|BAF05257.2| Os01g0559500 [Oryza sativa Japonica Group]
Length = 690
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 64/85 (75%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
MQ+H +I+SYSSY K+LG + N +AL++Y +I + +++V +CN +L CLV+NG+F
Sbjct: 114 MQEHDMLNIASYSSYFKYLGLSRNPARALQVYGAIRENPTRIHVSVCNSVLGCLVKNGRF 173
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+SS KL+D++ + GL+PD TY+T+
Sbjct: 174 DSSFKLYDEMIREGLSPDLFTYSTL 198
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVY 86
KA E + + DE K N+F + +L+ N +E + L ++ SGLTP+ V T+
Sbjct: 246 KAEEYFQKMKDEGHKPNLFHYSSLLNAYSENANYEKADLLMKDLRSSGLTPNKVILTTLL 305
Query: 87 Q 87
+
Sbjct: 306 K 306
>gi|57899342|dbj|BAD87953.1| putative PPR protein [Oryza sativa Japonica Group]
Length = 650
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 64/85 (75%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
MQ+H +I+SYSSY K+LG + N +AL++Y +I + +++V +CN +L CLV+NG+F
Sbjct: 114 MQEHDMLNIASYSSYFKYLGLSRNPARALQVYGAIRENPTRIHVSVCNSVLGCLVKNGRF 173
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+SS KL+D++ + GL+PD TY+T+
Sbjct: 174 DSSFKLYDEMIREGLSPDLFTYSTL 198
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVY 86
KA E + + DE K N+F + +L+ N +E + L ++ SGLTP+ V T+
Sbjct: 246 KAEEYFQKMKDEGHKPNLFHYSSLLNAYSENANYEKADLLMKDLRSSGLTPNKVILTTLL 305
Query: 87 Q 87
+
Sbjct: 306 K 306
>gi|222618680|gb|EEE54812.1| hypothetical protein OsJ_02231 [Oryza sativa Japonica Group]
Length = 637
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 64/85 (75%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
MQ+H +I+SYSSY K+LG + N +AL++Y +I + +++V +CN +L CLV+NG+F
Sbjct: 101 MQEHDMLNIASYSSYFKYLGLSRNPARALQVYGAIRENPTRIHVSVCNSVLGCLVKNGRF 160
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+SS KL+D++ + GL+PD TY+T+
Sbjct: 161 DSSFKLYDEMIREGLSPDLFTYSTL 185
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVY 86
KA E + + DE K N+F + +L+ N +E + L ++ SGLTP+ V T+
Sbjct: 233 KAEEYFQKMKDEGHKPNLFHYSSLLNAYSENANYEKADLLMKDLRSSGLTPNKVILTTLL 292
Query: 87 Q 87
+
Sbjct: 293 K 293
>gi|242053311|ref|XP_002455801.1| hypothetical protein SORBIDRAFT_03g025430 [Sorghum bicolor]
gi|241927776|gb|EES00921.1| hypothetical protein SORBIDRAFT_03g025430 [Sorghum bicolor]
Length = 642
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 64/85 (75%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
MQ+ T+ +SYSSY K+LG + + +AL++Y +I D++ KV+V +CN +L CLV+NG+
Sbjct: 106 MQEREMTNAASYSSYFKYLGLSRDPARALQVYGAIKDQTMKVHVSVCNSVLGCLVKNGRL 165
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+SS KL+D++ + GL+PD TY+T+
Sbjct: 166 DSSFKLYDEMIREGLSPDPFTYSTL 190
>gi|357445509|ref|XP_003593032.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482080|gb|AES63283.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 627
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 61/85 (71%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
MQ++ K + SYS YIKF+ ++ L++YN I ES K NV++CN +LSCL++ GKF
Sbjct: 95 MQENKKLDVYSYSHYIKFMANKLDASTMLKLYNDIQVESAKDNVYVCNSVLSCLIKKGKF 154
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
++++KLF ++K GL PD VTY+T+
Sbjct: 155 DTTMKLFRQMKHDGLVPDLVTYSTL 179
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
KALE+ + D +++ I IL+ NGK+E + F+++K G +P+ Y+++
Sbjct: 192 KALELIQELQDNKLRMDDVIYGAILAVCASNGKWEEAEYYFNQMKSEGRSPNVYHYSSL 250
>gi|124360264|gb|ABN08277.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 368
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 61/85 (71%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
MQ++ K + SYS YIKF+ ++ L++YN I ES K NV++CN +LSCL++ GKF
Sbjct: 95 MQENKKLDVYSYSHYIKFMANKLDASTMLKLYNDIQVESAKDNVYVCNSVLSCLIKKGKF 154
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
++++KLF ++K GL PD VTY+T+
Sbjct: 155 DTTMKLFRQMKHDGLVPDLVTYSTL 179
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
KALE+ + D +++ I IL+ NGK+E + F+++K G +P+ Y+++
Sbjct: 192 KALELIQELQDNKLRMDDVIYGAILAVCASNGKWEEAEYYFNQMKSEGRSPNVYHYSSL 250
>gi|356525958|ref|XP_003531588.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Glycine max]
Length = 630
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTSISSYSSYIKFLG-KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ++ K SYS YI+F+ N ++ K L++Y+SI ++S K+NV +CN +LSCL++ K
Sbjct: 96 MQENNKLDALSYSHYIRFMASHNLDAAKMLQLYHSIQNQSAKINVLVCNSVLSCLIKKAK 155
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
F S+L LF ++K GL PD VTY T+
Sbjct: 156 FNSALNLFQQMKLDGLLPDLVTYTTL 181
>gi|414881861|tpg|DAA58992.1| TPA: hypothetical protein ZEAMMB73_732512 [Zea mays]
Length = 642
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/85 (43%), Positives = 61/85 (71%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
MQ+ T+ +SYSSY K+LG + + + L +Y +I D + +V+V +CN +L CLV+NG+
Sbjct: 106 MQEREMTNAASYSSYFKYLGLSRDPARVLRVYGAIKDRTLRVHVSVCNSVLGCLVKNGRL 165
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+SS KL+D++ + GL+PD TY+T+
Sbjct: 166 DSSFKLYDEMIREGLSPDPFTYSTL 190
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G K+ ++S I L + G+ ++ ++ E+ ++ + N L
Sbjct: 351 MKEKGVKSDGYAFSIMISALHRGGHHQESKQLAKEFESENASYDLVMLNTSLRTYCSTND 410
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
ES +++ K+ +S ++PD +T+NT+
Sbjct: 411 MESVMRMLKKMDESNISPDNITFNTL 436
>gi|168005568|ref|XP_001755482.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693189|gb|EDQ79542.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 765
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/86 (44%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESD-KVNVFICNLILSCLVRNGK 59
M+++ K S +Y+SY LGK+G S KA+ ++N + +S+ + NVF+CN ILS ++ NGK
Sbjct: 214 MKENNKLSPPTYTSYFSVLGKSGQSRKAIRVFNELPLDSEVRKNVFVCNSILSTMIYNGK 273
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + +LF+++K+ GL PD VTY+TV
Sbjct: 274 IDKAFRLFEQLKKEGLQPDTVTYSTV 299
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 38/77 (49%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y + + G +A + + D N+F + +L+ GK++ + ++ + I+
Sbjct: 332 YGAMMNVCASQGLDREAQATFQEMCDAGFTPNLFHYSSLLNAYASRGKYQQAERVLEAIR 391
Query: 72 QSGLTPDAVTYNTVYQS 88
+GLTP+ V YN++ +
Sbjct: 392 AAGLTPNLVVYNSLMNA 408
>gi|253758399|ref|XP_002488880.1| hypothetical protein SORBIDRAFT_2635s002020 [Sorghum bicolor]
gi|241947295|gb|EES20440.1| hypothetical protein SORBIDRAFT_2635s002020 [Sorghum bicolor]
Length = 256
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 53/70 (75%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
MQ+ T+ +SYSSY K+LG + + +AL++Y SI D++ KV+V +CN +L CLV+NG+
Sbjct: 43 MQEREMTNAASYSSYFKYLGLSRDPARALQVYGSIKDQTMKVHVSVCNSVLGCLVKNGRL 102
Query: 61 ESSLKLFDKI 70
+SS KL+D++
Sbjct: 103 DSSFKLYDEM 112
>gi|253759091|ref|XP_002488911.1| hypothetical protein SORBIDRAFT_2002s002010 [Sorghum bicolor]
gi|241947250|gb|EES20395.1| hypothetical protein SORBIDRAFT_2002s002010 [Sorghum bicolor]
Length = 72
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 53/70 (75%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
MQ+ T+ +SYSSY K+LG + + +AL++Y SI D++ KV+V +CN +L CLV+NG+
Sbjct: 1 MQEREMTNAASYSSYFKYLGLSRDPARALQVYGSIKDQTMKVHVSVCNSVLGCLVKNGRL 60
Query: 61 ESSLKLFDKI 70
+SS KL+D++
Sbjct: 61 DSSFKLYDEM 70
>gi|115445137|ref|NP_001046348.1| Os02g0226900 [Oryza sativa Japonica Group]
gi|49388538|dbj|BAD25660.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|49388672|dbj|BAD25856.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535879|dbj|BAF08262.1| Os02g0226900 [Oryza sativa Japonica Group]
Length = 637
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G + +YS I+ GK+ A +++ + E N+ N++L CL R GK
Sbjct: 524 MQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGK 583
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E + KL++ +KQ GL PD++TY+ +
Sbjct: 584 TEEAHKLYETMKQQGLIPDSITYSIL 609
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 47/80 (58%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y+S I LGK+G+ +A ++ + ++ +VF ++++ C ++ K E +
Sbjct: 495 KPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACS 554
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LFD++ G TP+ VTYN +
Sbjct: 555 LFDEMISEGCTPNIVTYNIL 574
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 32/56 (57%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTY 82
K ++Y + + K+++F N++L L + G + + ++F+ +KQ PDA TY
Sbjct: 204 KGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDMKQKHCVPDAYTY 259
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 43/79 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+ I G+ G KA E++ + S K +V N +++CL ++G + + LF
Sbjct: 463 VFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFK 522
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++++ G PD TY+ + +
Sbjct: 523 EMQEKGYDPDVFTYSILIE 541
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 45/85 (52%)
Query: 4 HGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESS 63
H K ++ S ++ L +L+A+++ + + ++ +V + N++ S L + +
Sbjct: 388 HEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFI 447
Query: 64 LKLFDKIKQSGLTPDAVTYNTVYQS 88
LFDK+K +G+ PD TYN + S
Sbjct: 448 SNLFDKMKTNGIIPDVFTYNIMISS 472
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVN-----VFICNLILSCLVRNGKFE 61
T + Y+ LGK LK + +++ D+ K N VF N+++S R G +
Sbjct: 426 TDVGMYNMVFSALGK----LKQVSFISNLFDKM-KTNGIIPDVFTYNIMISSYGRVGLVD 480
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
+ +LF+ ++ S PD VTYN++
Sbjct: 481 KASELFEVMEASSCKPDVVTYNSL 504
>gi|255549794|ref|XP_002515948.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544853|gb|EEF46368.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 706
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G + +YS+ I+ GK A +++ + E N+ N++L CL R+G+
Sbjct: 380 MQEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCFPNIVTYNILLDCLERSGR 439
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
++ L+ K+KQ GLTPD++TY+ +
Sbjct: 440 TAEAVDLYAKLKQQGLTPDSITYSVL 465
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 46/79 (58%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y+ I G+ G +A++I+ + + K ++ N +++CL +NG + + F
Sbjct: 319 IFTYNILISSFGRAGKVYEAIKIFEELENSDCKPDIISYNSLINCLGKNGDLDEAHIRFR 378
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++++ GL PD VTY+T+ +
Sbjct: 379 EMQEKGLNPDVVTYSTLIE 397
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G T I +++ + L K+ +A +++ + + + + + +++ R GK
Sbjct: 68 MKRKGYTLDIFAFNMLLDALAKDQKVDQAFKVFEDMKKKHCEPDEYTYTIMIRMTGRIGK 127
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+ SL LF+++ G +P+ + YNT+ Q+
Sbjct: 128 LDESLALFEEMLNKGCSPNLIAYNTMIQA 156
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 41/79 (51%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
S Y+ ++ L K G++ +A ++ ++ D+ + C +L L GK ++ L K
Sbjct: 215 SIYAYLVRTLNKLGHASEAHRLFCNMWSYHDRGDRDACLSMLESLCNAGKTVEAIDLLGK 274
Query: 70 IKQSGLTPDAVTYNTVYQS 88
I + G+ D + YNTV+ +
Sbjct: 275 IHEKGINTDTIMYNTVFTA 293
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 40/74 (54%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ LG+ ++Y + + ++F N+++S R GK ++K+F++++
Sbjct: 287 YNTVFTALGRLKQISHLYDLYEKMKLDGPLPDIFTYNILISSFGRAGKVYEAIKIFEELE 346
Query: 72 QSGLTPDAVTYNTV 85
S PD ++YN++
Sbjct: 347 NSDCKPDIISYNSL 360
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 15/72 (20%), Positives = 37/72 (51%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y ++ ++ +S +Y + + +++F N++L L ++ K + + K+F+ +
Sbjct: 44 TYKCLVQAYLRSCDSDNGFRVYLEMKRKGYTLDIFAFNMLLDALAKDQKVDQAFKVFEDM 103
Query: 71 KQSGLTPDAVTY 82
K+ PD TY
Sbjct: 104 KKKHCEPDEYTY 115
>gi|356558071|ref|XP_003547332.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Glycine max]
Length = 647
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G + +YS+ I+ GK A +++ + E N+ N++L CL R+G+
Sbjct: 534 MQEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEECTPNLITYNILLDCLERSGR 593
Query: 60 FESSLKLFDKIKQSGLTPDAVTY 82
++ L+ K+KQ GLTPD++TY
Sbjct: 594 TAEAVDLYAKLKQQGLTPDSITY 616
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+Q G I +Y+ I G+ G A++ + + + K +V N +++CL +NG
Sbjct: 464 MKQDGPPPDIFTYNILISSFGRAGRVDIAVKFFEELENSDCKPDVISYNSLINCLGKNGD 523
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
+ + F ++++ GL PD VTY+T+ +
Sbjct: 524 VDEAHMRFKEMQEKGLNPDVVTYSTLIE 551
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 44/77 (57%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ +++ L K G++ +A ++ ++ + DK + C +L L GK ++ L +KI
Sbjct: 371 YAYFVRTLSKVGHASEAHRLFCNMWNFHDKGDKDACMSMLESLCSAGKMTEAIDLLNKIH 430
Query: 72 QSGLTPDAVTYNTVYQS 88
+ G+T D + YNTV+ +
Sbjct: 431 EKGITTDTIMYNTVFTA 447
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 40/74 (54%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ LG+ ++Y + + ++F N+++S R G+ + ++K F++++
Sbjct: 441 YNTVFTALGRLKQISHIHDLYEKMKQDGPPPDIFTYNILISSFGRAGRVDIAVKFFEELE 500
Query: 72 QSGLTPDAVTYNTV 85
S PD ++YN++
Sbjct: 501 NSDCKPDVISYNSL 514
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 40/85 (47%)
Query: 4 HGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESS 63
H K + S ++ L G +A+++ N I ++ + + N + + L R +
Sbjct: 398 HDKGDKDACMSMLESLCSAGKMTEAIDLLNKIHEKGITTDTIMYNTVFTALGRLKQISHI 457
Query: 64 LKLFDKIKQSGLTPDAVTYNTVYQS 88
L++K+KQ G PD TYN + S
Sbjct: 458 HDLYEKMKQDGPPPDIFTYNILISS 482
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 45/84 (53%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
++H + + +Y+ I+ GK+ + +AL ++ ++ + N+ N ++ L + +
Sbjct: 259 RRHCEPDVFTYTIMIRMTGKSSKTDEALALFQAMLAKGCTPNLIGYNTMIEALAKGRMVD 318
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
++ LF K+ ++ + P+ TY+ +
Sbjct: 319 KAVLLFSKMVENDIQPNEFTYSVI 342
>gi|218190347|gb|EEC72774.1| hypothetical protein OsI_06434 [Oryza sativa Indica Group]
Length = 579
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G + +YS I+ GK+ A +++ + E N+ N++L CL R GK
Sbjct: 466 MQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGK 525
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E + KL++ +KQ GL PD++TY+ +
Sbjct: 526 TEEAHKLYETMKQQGLIPDSITYSIL 551
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 47/80 (58%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y+S I LGK+G+ +A ++ + ++ +VF ++++ C ++ K E +
Sbjct: 437 KPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACS 496
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LFD++ G TP+ VTYN +
Sbjct: 497 LFDEMISEGCTPNIVTYNIL 516
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 32/56 (57%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTY 82
K ++Y + + K+++F N++L L + G + + ++F+ +KQ PDA TY
Sbjct: 146 KGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDMKQKHCVPDAYTY 201
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 43/79 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+ I G+ G KA E++ + S K +V N +++CL ++G + + LF
Sbjct: 405 VFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFK 464
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++++ G PD TY+ + +
Sbjct: 465 EMQEKGYDPDVFTYSILIE 483
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 45/85 (52%)
Query: 4 HGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESS 63
H K ++ S ++ L +L+A+++ + + ++ +V + N++ S L + +
Sbjct: 330 HEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFI 389
Query: 64 LKLFDKIKQSGLTPDAVTYNTVYQS 88
LFDK+K +G+ PD TYN + S
Sbjct: 390 SNLFDKMKTNGIIPDVFTYNIMISS 414
>gi|222622462|gb|EEE56594.1| hypothetical protein OsJ_05954 [Oryza sativa Japonica Group]
Length = 579
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G + +YS I+ GK+ A +++ + E N+ N++L CL R GK
Sbjct: 466 MQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGK 525
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E + KL++ +KQ GL PD++TY+ +
Sbjct: 526 TEEAHKLYETMKQQGLIPDSITYSIL 551
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 47/80 (58%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y+S I LGK+G+ +A ++ + ++ +VF ++++ C ++ K E +
Sbjct: 437 KPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACS 496
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LFD++ G TP+ VTYN +
Sbjct: 497 LFDEMISEGCTPNIVTYNIL 516
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 32/56 (57%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTY 82
K ++Y + + K+++F N++L L + G + + ++F+ +KQ PDA TY
Sbjct: 146 KGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDMKQKHCVPDAYTY 201
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 43/79 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+ I G+ G KA E++ + S K +V N +++CL ++G + + LF
Sbjct: 405 VFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFK 464
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++++ G PD TY+ + +
Sbjct: 465 EMQEKGYDPDVFTYSILIE 483
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 45/85 (52%)
Query: 4 HGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESS 63
H K ++ S ++ L +L+A+++ + + ++ +V + N++ S L + +
Sbjct: 330 HEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFI 389
Query: 64 LKLFDKIKQSGLTPDAVTYNTVYQS 88
LFDK+K +G+ PD TYN + S
Sbjct: 390 SNLFDKMKTNGIIPDVFTYNIMISS 414
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 1 MQQHGK-TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ G+ +S+Y + L KNG+ +A++++ SI K N+ + +++L + R GK
Sbjct: 1321 MQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGK 1380
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E + K FD+I ++GL PD + YN +
Sbjct: 1381 LEEAWKQFDEISKNGLEPDTIAYNIL 1406
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ GK I +Y++ + L G A +++ S+ D K+NVF N++++ ++ K
Sbjct: 1216 MRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQK 1275
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + + F++++ GL P VTYNT+
Sbjct: 1276 IDEAFRFFEEMRPKGLKPSTVTYNTL 1301
Score = 34.7 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 37/77 (48%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+S I L + G + N + D + F +++ L + GK + ++ +
Sbjct: 1155 VYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILE 1214
Query: 69 KIKQSGLTPDAVTYNTV 85
++ G PD +TYNT+
Sbjct: 1215 LMRHKGKEPDILTYNTL 1231
>gi|359482557|ref|XP_002277683.2| PREDICTED: pentatricopeptide repeat-containing protein At5g39710
[Vitis vinifera]
Length = 990
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G + +YS+ I+ GK A +++ + E N+ N++L CL R+G+
Sbjct: 380 MREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGR 439
Query: 60 FESSLKLFDKIKQSGLTPDAVTY 82
++ L+ K+KQ GLTPD++TY
Sbjct: 440 TAEAVDLYAKLKQQGLTPDSITY 462
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 1 MQQHGKTS-ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+Q G + I SY+ I G+ G +A++I+ + + S K ++ N +++CL +NG
Sbjct: 310 MKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGD 369
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
+ + F ++++ GL+PD VTY+T+ +
Sbjct: 370 IDEAHMRFKEMREEGLSPDVVTYSTLIE 397
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K I S++S I LGKNG+ +A + + +E +V + ++ C + K E + +
Sbjct: 351 KPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACR 410
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LFD++ G +P+ VTYN +
Sbjct: 411 LFDEMLAEGCSPNIVTYNIL 430
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 43/74 (58%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ + LGK + ++Y + + ++F N+++S R G+ E ++K+F++++
Sbjct: 287 YNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELE 346
Query: 72 QSGLTPDAVTYNTV 85
S PD +++N++
Sbjct: 347 NSSCKPDIISFNSL 360
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 44/85 (51%)
Query: 4 HGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESS 63
H + +Y S ++ L G + +AL++ + I ++ + + N +LS L + K
Sbjct: 244 HDEGDRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDL 303
Query: 64 LKLFDKIKQSGLTPDAVTYNTVYQS 88
L++K+KQ G +PD +YN + S
Sbjct: 304 HDLYEKMKQDGPSPDIFSYNILISS 328
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
++ NS KA E+Y + K+++F N++L L ++ K + +F +K+ PD
Sbjct: 54 RSNNSNKAFEVYVELRRRGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEY 113
Query: 81 TY 82
TY
Sbjct: 114 TY 115
>gi|357448559|ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483603|gb|AES64806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G + +YS+ I+ GK A +++ + E N+ N++L CL R+G+
Sbjct: 526 MQEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILLDCLERSGR 585
Query: 60 FESSLKLFDKIKQSGLTPDAVTY 82
++ L+ K+KQ GLTPD++TY
Sbjct: 586 TAEAVDLYAKLKQQGLTPDSITY 608
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 1 MQQHGKTS-ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+Q G I +Y+ I G+ G A++I+ + + + + +V N +++CL +NG
Sbjct: 456 MKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGD 515
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
+ + F ++++ GL PD VTY+T+ +
Sbjct: 516 VDEAHMRFKEMQEKGLNPDVVTYSTLIE 543
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + SY+S I LGKNG+ +A + + ++ +V + ++ C + K E +
Sbjct: 497 QPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACS 556
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LFD++ G +P+ VTYN +
Sbjct: 557 LFDEMIAEGCSPNLVTYNIL 576
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 42/74 (56%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ LG+ ++Y + + ++F N+++S R G+ +S++K+F++++
Sbjct: 433 YNTVFTALGRLKQVSHIHDLYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELE 492
Query: 72 QSGLTPDAVTYNTV 85
S PD ++YN++
Sbjct: 493 NSNCQPDVISYNSL 506
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/84 (20%), Positives = 46/84 (54%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
++H + +Y+ I+ GK G + ++L ++ ++ ++ +N+ N ++ L + +
Sbjct: 251 RRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMAD 310
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
++ LF K+ ++G P+ TY+ +
Sbjct: 311 KAVLLFSKMVENGCQPNEFTYSVL 334
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 41/85 (48%)
Query: 4 HGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESS 63
H K +Y S ++ L +G +A+++ N ++ + + N + + L R +
Sbjct: 390 HDKGDKDAYMSMLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHI 449
Query: 64 LKLFDKIKQSGLTPDAVTYNTVYQS 88
L++K+KQ G PD TYN + S
Sbjct: 450 HDLYEKMKQDGPPPDIFTYNILISS 474
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 42/77 (54%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ +++ L K G+S +A ++ ++ + DK + +L L +GK ++ L ++
Sbjct: 363 YAYFVRTLSKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLESLCSSGKIAEAIDLLNRFH 422
Query: 72 QSGLTPDAVTYNTVYQS 88
+ +T D + YNTV+ +
Sbjct: 423 EKCITTDTIMYNTVFTA 439
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 45/80 (56%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+T+ +Y +I + GK+G S KA++ + + N+ CN L L G+ E + +
Sbjct: 434 ETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKE 493
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
F+ +K+ GL PDA+TYN +
Sbjct: 494 FFNGLKKCGLAPDAITYNIL 513
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y++ + LGK G +A ++ + + N N +L CL +NG+ + +LK+
Sbjct: 576 TVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKML 635
Query: 68 DKIKQSGLTPDAVTYNTV 85
++ + PD +TYNTV
Sbjct: 636 FRMTEMNCFPDVLTYNTV 653
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 40/72 (55%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ + GK G+ A E++ + E + ++ ++++ CL GK + +L F+++K
Sbjct: 931 YNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELK 990
Query: 72 QSGLTPDAVTYN 83
SGL PD V YN
Sbjct: 991 LSGLDPDLVCYN 1002
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 41/80 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + SYS + L G AL + + ++ NL+++ L R+ + E +L
Sbjct: 960 RPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALS 1019
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LFD+++ G+TPD TYN +
Sbjct: 1020 LFDEMRNRGITPDLYTYNAL 1039
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ +I +++ I+ LG+ G +A I + D +V +++ L GK ++ +
Sbjct: 259 RPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKE 318
Query: 66 LFDKIKQSGLTPDAVTYNTVYQ--SDH 90
LF K+K S PD VTY T+ SDH
Sbjct: 319 LFLKMKASSHKPDRVTYITLLDKFSDH 345
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ ++ GK G A+++ + + + V I N ++ L + + + + K+F ++
Sbjct: 509 TYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRM 568
Query: 71 KQSGLTPDAVTYNTV 85
K+ L P VTYNT+
Sbjct: 569 KEMKLAPTVVTYNTL 583
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 22/103 (21%)
Query: 3 QHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKV-------------------- 42
+HGK ++ +Y+ ++K L K+ +LE YNS+ D K
Sbjct: 764 KHGK-AVDAYNVFLK-LTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTP 821
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
+VF NL L L ++GK + L++++ G P+ +T+N V
Sbjct: 822 DVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIV 864
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 38/80 (47%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K S+ +YS+ + LGK + + + + + N++ + + L R GK + +
Sbjct: 224 KPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYG 283
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+ ++ +G PD VTY +
Sbjct: 284 ILKRMDDAGCGPDVVTYTVL 303
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 16 IKFLGKNGNSLKALEIYNSITDE---SDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
+KFL K+G ++ A ++ +T + + + N ++ L++ E + LF K+K
Sbjct: 759 VKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAY--NSLIDGLLKARLTEMAWGLFYKMKN 816
Query: 73 SGLTPDAVTYN 83
+G TPD TYN
Sbjct: 817 AGCTPDVFTYN 827
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 1 MQQHGK-TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ G+ +S+Y + L KNG+ +A++++ SI K N+ + +++L + R GK
Sbjct: 382 MQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGK 441
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E + K FD+I ++GL PD + YN +
Sbjct: 442 LEEAWKQFDEISKNGLEPDTIAYNIL 467
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 1 MQQHGK-TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M GK I +Y++ + L G A +++ S+ D K+NVF N++++ ++ K
Sbjct: 277 MHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQK 336
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + +LF++++ GL P VTYNT+
Sbjct: 337 IDEAFRLFEEMRPKGLKPSTVTYNTL 362
>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
Length = 413
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 47/77 (61%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +YS + LGK G + KALE+++++ + + N+++SCL + GK + +L+L +
Sbjct: 117 VFTYSYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLE 176
Query: 69 KIKQSGLTPDAVTYNTV 85
+ + G+ PD TYN V
Sbjct: 177 DMNRKGIMPDCRTYNIV 193
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 37/77 (48%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
++++ + I L K G ALE + N +I N ++S R+G+ + +LF
Sbjct: 257 LTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQ 316
Query: 69 KIKQSGLTPDAVTYNTV 85
+ + PD++TY +
Sbjct: 317 DMIECSCFPDSITYTIL 333
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Query: 1 MQQHG--KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNG 58
++Q G K + S+ + + FL K + AL ++ + + +V +CN ++ C R G
Sbjct: 37 LKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLQADVNVCNTLIHCTCRLG 96
Query: 59 KFESSLKLFDKIKQSGLTPDAVTYN 83
+ +L + D TY+
Sbjct: 97 MLRQARRLLHHMTAHAFVLDVFTYS 121
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y +I F GK+G S KALE + + N+ CN L L G+ + +F+++
Sbjct: 441 TYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRL 500
Query: 71 KQSGLTPDAVTYNTVYQ 87
K +GL PD+VTYN + +
Sbjct: 501 KSNGLAPDSVTYNMMMK 517
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y++ I LGK G +A+E++ S+T N N IL CL +N + + +LK+
Sbjct: 578 TVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKML 637
Query: 68 DKIKQSGLTPDAVTYNTV 85
K+ PD +T+NT+
Sbjct: 638 YKMTTMNCMPDVLTFNTI 655
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 43/80 (53%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K +I +Y+ I+ LG+ G +A I + D+ +V +++ L GK + +++
Sbjct: 261 KPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAME 320
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LF K+K S PD VTY T+
Sbjct: 321 LFVKMKASSHKPDRVTYITM 340
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I GK G+ A E++ + E + ++ ++ CL G+ + +L F+K+K
Sbjct: 933 YNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLK 992
Query: 72 QSGLTPDAVTYN 83
Q+GL D++ YN
Sbjct: 993 QTGLYLDSIAYN 1004
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 44/75 (58%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ +K K G +A+E+ + +++ + ++ + N +++ L + G+ + + K+F ++
Sbjct: 511 TYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRL 570
Query: 71 KQSGLTPDAVTYNTV 85
K L P VTYNT+
Sbjct: 571 KDMKLAPTVVTYNTL 585
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 42/80 (52%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + SY+S + L + G AL + + ++ NL++ L R+ + E +L
Sbjct: 962 RPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALT 1021
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L+D+++ G+ PD TYN++
Sbjct: 1022 LYDEMQSRGINPDLFTYNSL 1041
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I LG++ +AL +Y+ + ++F N ++ L G E + KL++++
Sbjct: 1002 AYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEEL 1061
Query: 71 KQSGLTPDAVTYNTV 85
+ GL P+ TYN +
Sbjct: 1062 QFIGLEPNVFTYNAL 1076
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 36/74 (48%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+ + GK+G + E+Y + S K N N+I++ LV++ + +L LF
Sbjct: 825 VFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFY 884
Query: 69 KIKQSGLTPDAVTY 82
+ +P TY
Sbjct: 885 DLVSGDFSPTPCTY 898
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y + L K+G +A E++ + D + N I N++++ + G ++ +LF ++
Sbjct: 897 TYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRM 956
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ PD +Y ++
Sbjct: 957 VREGIRPDLKSYTSL 971
Score = 34.7 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 39/74 (52%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +++ + L K GN +A + + + + N+ N ++S L+R + + +L LF+
Sbjct: 369 VITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFN 428
Query: 69 KIKQSGLTPDAVTY 82
++ G+ P A TY
Sbjct: 429 NMETLGVVPTAYTY 442
Score = 34.7 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 39/73 (53%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
+S I L K G +A +++ + D V N +++ L + G+ + +++LF +
Sbjct: 548 NSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTG 607
Query: 73 SGLTPDAVTYNTV 85
+G P+ +T+NT+
Sbjct: 608 NGCPPNTITFNTI 620
Score = 34.3 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 6 KTSISSYSSYIK-FLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
K ++ SY+ I+ FLG + + + A ++ + + +VF NL+L ++GK
Sbjct: 787 KPTLESYNFLIEGFLGVHNDEM-AWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELF 845
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
+L++++ S P+ +T+N +
Sbjct: 846 ELYEQMICSSCKPNTITHNII 866
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+ + LGK G LKALE++ S+T+ N N +L CL +N + +LK+F
Sbjct: 584 TVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMF 643
Query: 68 DKIKQSGLTPDAVTYNTV 85
++ PD +TYNT+
Sbjct: 644 CRMTMMNCNPDVLTYNTI 661
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 45/82 (54%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + SY +I + GK+G+ KA++ + ++ ++ CN L L G+ +
Sbjct: 442 KPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAED 501
Query: 66 LFDKIKQSGLTPDAVTYNTVYQ 87
+F+ + + GL+PD+VTYN + +
Sbjct: 502 IFNDLHKCGLSPDSVTYNMLMK 523
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 42/74 (56%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I GK+G A E++ + E + ++ +++ CL G+ + +++ F+++K
Sbjct: 939 YNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELK 998
Query: 72 QSGLTPDAVTYNTV 85
+GL PD V+YN +
Sbjct: 999 LTGLDPDTVSYNFI 1012
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 44/82 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y I L K G S +A++I+ + D N I N++++ ++G+ + + +LF K+
Sbjct: 903 TYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKM 962
Query: 71 KQSGLTPDAVTYNTVYQSDHIT 92
+ G+ PD +Y + + IT
Sbjct: 963 VKEGIRPDLKSYTILVECLCIT 984
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ +K K G KA ++ + + + + +V I N +++ L + G+ +++ K+F ++
Sbjct: 517 TYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRL 576
Query: 71 KQSGLTPDAVTYNTV 85
K L P VTYN +
Sbjct: 577 KNLKLAPTVVTYNIL 591
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/80 (21%), Positives = 40/80 (50%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K S+ +YS+ + LG+ G++ K + + + + N++ + + L R + + +
Sbjct: 232 KPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWG 291
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F ++ G PD +TY +
Sbjct: 292 IFKEMDDEGCGPDVITYTVL 311
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ +I +Y+ I+ LG+ A I+ + DE +V +++ L GK + + +
Sbjct: 267 RPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKE 326
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L+ K++ S +PD VTY T+
Sbjct: 327 LYVKMRASSHSPDRVTYITL 346
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
+S I L K G A +++ + + V N++L+ L + GK +L+LF + +
Sbjct: 554 NSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTE 613
Query: 73 SGLTPDAVTYNTV 85
SG P+ +T+N++
Sbjct: 614 SGCPPNTITFNSL 626
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 45/82 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY+ I LGK+ +AL +++ + + +++ N ++ L GK + ++K+++++
Sbjct: 1008 SYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEEL 1067
Query: 71 KQSGLTPDAVTYNTVYQSDHIT 92
+ GL P TYN + + ++
Sbjct: 1068 QLVGLEPSVFTYNALIRGHSLS 1089
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 45/78 (57%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y++ + LGK G KA+E++ S+ ++ N N +L C +N + E +LK+F
Sbjct: 576 TVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMF 635
Query: 68 DKIKQSGLTPDAVTYNTV 85
K+ PD +TYNTV
Sbjct: 636 SKMTVMDCKPDVLTYNTV 653
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 45/77 (58%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ +I + GK+G + KA+E + + + N+ CN L L G+ + +F+ +
Sbjct: 439 TYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGL 498
Query: 71 KQSGLTPDAVTYNTVYQ 87
+++GL PD+VTYN + +
Sbjct: 499 RENGLAPDSVTYNMMMK 515
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 45/80 (56%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ ++ +++ I+ LG+ G +A EI+ + DE ++ +++ L G+ E++ +
Sbjct: 259 RPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKE 318
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LF K+K +G PD V Y T+
Sbjct: 319 LFVKMKANGHKPDQVIYITL 338
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M +G K + + ++ I GK G++ A +++ + +E + ++ +++ CL G+
Sbjct: 919 MSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGR 978
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +L F+++K +GL PD + YN +
Sbjct: 979 VDEALYYFNELKSTGLDPDFIAYNRI 1004
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K S+ +YS+ + LGK +S + + + D + NV+ + + L R GK + + +
Sbjct: 224 KPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYE 283
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F ++ G PD VTY +
Sbjct: 284 IFRRMDDEGCGPDLVTYTVL 303
Score = 41.2 bits (95), Expect = 0.076, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ +K K G +A+ + + + + +V + N ++ L + G+ + + ++FD++
Sbjct: 509 TYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRM 568
Query: 71 KQSGLTPDAVTYNTV 85
K L+P VTYNT+
Sbjct: 569 KDMKLSPTVVTYNTL 583
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I LGK+ +AL +YN + + +++ N ++ L G E + ++++++
Sbjct: 1000 AYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEEL 1059
Query: 71 KQSGLTPDAVTYNTV 85
+ +GL PD TYN +
Sbjct: 1060 QLAGLEPDVFTYNAL 1074
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 41/80 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + SY+ + L G +AL +N + + N I++ L ++ + E +L
Sbjct: 960 RPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALA 1019
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L+++++ G+ PD TYN++
Sbjct: 1020 LYNEMRNRGIVPDLYTYNSL 1039
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 38/72 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y I L K G +A+ ++ ++D K N I N++++ + G E++ +LF ++
Sbjct: 895 TYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRM 954
Query: 71 KQSGLTPDAVTY 82
G+ PD +Y
Sbjct: 955 VNEGIRPDLKSY 966
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 41/73 (56%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
+S I L K G +A ++++ + D V N +LS L + G+ + +++LF+ + +
Sbjct: 546 NSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIE 605
Query: 73 SGLTPDAVTYNTV 85
+P+ +++NT+
Sbjct: 606 KKCSPNTISFNTL 618
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 42/81 (51%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+++SY+ I L + + KA +++ + + + F N++L+ ++GK +L+
Sbjct: 787 TLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELY 846
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
++ PDA+TYN V S
Sbjct: 847 KEMISRRCKPDAITYNIVISS 867
>gi|255661114|gb|ACU25726.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 427
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 51/81 (62%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
I++Y+ I+ LGK G + A + + +T E +++ + N +++ L + G+ + + KL
Sbjct: 330 ADIATYNVIIQGLGKMGRADLANAVLDKLTKEGGYLDIVMYNTLINALGKAGRIDEANKL 389
Query: 67 FDKIKQSGLTPDAVTYNTVYQ 87
F ++K+SG+ PD VTYNT+ +
Sbjct: 390 FQQMKESGINPDVVTYNTLIE 410
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++HG + +YSS I LGK+G ++KA +++ + K + ++ L + G+
Sbjct: 175 MERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGR 234
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +L+L D++K+ G+ P VTYN +
Sbjct: 235 VDDALELLDEMKERGVKPGVVTYNAL 260
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ SYS I LG+ G ALE+ + + K N++ N ++ CL + G+F+ +L+L
Sbjct: 44 VVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLA 103
Query: 69 KIKQSGLTPDAVTYN 83
+++ +G PD TYN
Sbjct: 104 EMRDNGCVPDVRTYN 118
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y S I LGK G A +++ + + +V N L+ L R G+F+ + K+F+ +
Sbjct: 396 TYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDM 455
Query: 71 KQSGLTPDAVTYNTV 85
K+SGL PD TY+ +
Sbjct: 456 KESGLLPDVATYDAL 470
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ G K ++ +Y++ + LGK G +AL + + D +V N ++S L + G+
Sbjct: 70 MQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGR 129
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ LF ++++ G PD TYN++
Sbjct: 130 LSEAFTLFAEMRERGCVPDTFTYNSL 155
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 43/75 (57%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I LGK G S KA+E+ + +V + +++ L ++G+ + KLF ++
Sbjct: 151 TYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEM 210
Query: 71 KQSGLTPDAVTYNTV 85
K+ G PD++T+ +
Sbjct: 211 KRRGRKPDSITFTAL 225
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G K + +Y++ I GK G+ ++A + + + K +V + +++ L++ +
Sbjct: 245 MKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQ 304
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + ++ K+++ G PD +TYNT+
Sbjct: 305 LDEACQVLKKMEKEGCPPDTITYNTL 330
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 42/80 (52%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +YS+ I LGK A ++ + + ++F I++ L + G+ + + +LF
Sbjct: 359 VVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFS 418
Query: 69 KIKQSGLTPDAVTYNTVYQS 88
+++ GL+PD +TYN S
Sbjct: 419 EMRGKGLSPDVITYNAFLNS 438
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G+ S ++++ + LGK G ALE+ + + + K V N +++ + G
Sbjct: 210 MKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGD 269
Query: 60 FESSLKLFDKIKQSGLTPDAVTYN 83
+ L D++K++G PD VTY+
Sbjct: 270 LVEAYNLLDEMKRNGCKPDVVTYS 293
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+++G K + +YS I L K +A ++ + E + N +++ L + G
Sbjct: 280 MKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGL 339
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +LFD++K G PD VTY+T+
Sbjct: 340 LNDAGRLFDRMKSKGCNPDVVTYSTL 365
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 43/77 (55%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+ I LGK G +A ++ + + + F N ++ L + G+ + +++L +
Sbjct: 114 VRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLE 173
Query: 69 KIKQSGLTPDAVTYNTV 85
++++ G PD +TY+++
Sbjct: 174 EMERHGCPPDVMTYSSL 190
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 45/85 (52%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
M+ ++ +Y+S + L K G +A ++ + +V + +++ L R GK+
Sbjct: 1 MKGFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKW 60
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
E++L++ +++ G P+ TYNT+
Sbjct: 61 EAALEVVAEMQAKGCKPNLWTYNTL 85
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I LGK G A +++ + + +V + +++ L + + ES+ LF+++
Sbjct: 326 TYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEM 385
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ PD TY ++
Sbjct: 386 ESVGIQPDLFTYCSI 400
Score = 34.7 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
NV N +L+ L + G+ E + LF+++K + TPD V+Y+ + S
Sbjct: 8 NVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINS 53
>gi|297743170|emb|CBI36037.3| unnamed protein product [Vitis vinifera]
Length = 646
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G + + +YS+ I+ GK A +++ + E N+ N++L CL R+G+
Sbjct: 533 MREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGR 592
Query: 60 FESSLKLFDKIKQSGLTPDAVTY 82
++ L+ K+KQ GLTPD++TY
Sbjct: 593 TAEAVDLYAKLKQQGLTPDSITY 615
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+Q G + I SY+ I G+ G +A++I+ + + S K ++ N +++CL +NG
Sbjct: 463 MKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGD 522
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
+ + F ++++ GL+PD VTY+T+ +
Sbjct: 523 IDEAHMRFKEMREEGLSPDVVTYSTLIE 550
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 44/80 (55%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K I S++S I LGKNG+ +A + + +E +V + ++ C + K E + +
Sbjct: 504 KPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACR 563
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LFD++ G +P+ VTYN +
Sbjct: 564 LFDEMLAEGCSPNIVTYNIL 583
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 44/79 (55%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
T Y++ + LGK + ++Y + + ++F N+++S R G+ E ++K+
Sbjct: 435 TDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKI 494
Query: 67 FDKIKQSGLTPDAVTYNTV 85
F++++ S PD +++N++
Sbjct: 495 FEELENSSCKPDIISFNSL 513
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 44/85 (51%)
Query: 4 HGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESS 63
H + +Y S ++ L G + +AL++ + I ++ + + N +LS L + K
Sbjct: 397 HDEGDRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDL 456
Query: 64 LKLFDKIKQSGLTPDAVTYNTVYQS 88
L++K+KQ G +PD +YN + S
Sbjct: 457 HDLYEKMKQDGPSPDIFSYNILISS 481
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
++ NS KA E+Y + K+++F N++L L ++ K + +F +K+ PD
Sbjct: 237 RSNNSNKAFEVYVELRRRGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEY 296
Query: 81 TY 82
TY
Sbjct: 297 TY 298
>gi|255661108|gb|ACU25723.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 431
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 52/82 (63%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
I++Y+ I+ LGK G + A + +++ E +++ + N +++ L + G+ + + K+
Sbjct: 334 ADIATYNLIIQGLGKMGRADLAKAVLDTLMTEGGYLDIVMYNTLINALGKAGRIDEANKM 393
Query: 67 FDKIKQSGLTPDAVTYNTVYQS 88
F ++K+SG+ PD VTYNT+ Q+
Sbjct: 394 FAQMKESGINPDVVTYNTLIQA 415
>gi|147845950|emb|CAN82028.1| hypothetical protein VITISV_000613 [Vitis vinifera]
Length = 790
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G + + +YS+ I+ GK A +++ + E N+ N++L CL R+G+
Sbjct: 597 MREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGR 656
Query: 60 FESSLKLFDKIKQSGLTPDAVTY 82
++ L+ K+KQ GLTPD++TY
Sbjct: 657 TAEAVDLYAKLKQQGLTPDSITY 679
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+Q G + I SY+ I G+ G +A++I+ + + S K ++ N +++CL +NG
Sbjct: 527 MKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGD 586
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
+ + F ++++ GL+PD VTY+T+ +
Sbjct: 587 IDEAHMRFKEMREEGLSPDVVTYSTLIE 614
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 44/80 (55%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K I S++S I LGKNG+ +A + + +E +V + ++ C + K E + +
Sbjct: 568 KPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACR 627
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LFD++ G +P+ VTYN +
Sbjct: 628 LFDEMLAEGCSPNIVTYNIL 647
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 44/79 (55%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
T Y++ + LGK + ++Y + + ++F N+++S R G+ E ++K+
Sbjct: 499 TDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKI 558
Query: 67 FDKIKQSGLTPDAVTYNTV 85
F++++ S PD +++N++
Sbjct: 559 FEELENSSCKPDIISFNSL 577
Score = 40.8 bits (94), Expect = 0.091, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 44/85 (51%)
Query: 4 HGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESS 63
H + +Y S ++ L G + +AL++ + I ++ + + N +LS L + K
Sbjct: 461 HDEGDRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDL 520
Query: 64 LKLFDKIKQSGLTPDAVTYNTVYQS 88
L++K+KQ G +PD +YN + S
Sbjct: 521 HDLYEKMKQDGPSPDIFSYNILISS 545
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +YSS I K G KA E+++ + + N+FI N ++ L ++G + + KLFD
Sbjct: 360 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 419
Query: 69 KIKQSGLTPDAVTYNTV 85
+ + GL PD+VTY+T+
Sbjct: 420 GMPEKGLEPDSVTYSTM 436
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 43/74 (58%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I K GN ++AL I+ + +V C+ + L++NG+ + +LK+F ++K
Sbjct: 293 YTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELK 352
Query: 72 QSGLTPDAVTYNTV 85
+ GL PD TY+++
Sbjct: 353 EKGLVPDVFTYSSL 366
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 39/77 (50%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ YS+ I G +A + + ++ ++F N I+SCL + GK E +
Sbjct: 182 KPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 241
Query: 66 LFDKIKQSGLTPDAVTY 82
+I+ GL PDAVT+
Sbjct: 242 YLLEIQGRGLKPDAVTF 258
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +YSS I K G KA E+++ + + N+FI N ++ L ++G + + KLFD
Sbjct: 559 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 618
Query: 69 KIKQSGLTPDAVTYNTV 85
+ + GL PD+VTY+T+
Sbjct: 619 GMPEKGLEPDSVTYSTM 635
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 40/65 (61%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
K GN ++AL I+ + +V C+ + L++NG+ + +LK+F ++K+ GL PD
Sbjct: 501 KAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVF 560
Query: 81 TYNTV 85
TY+++
Sbjct: 561 TYSSL 565
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ YS+ I G +A + + ++ ++F N I+SCL + GK E +
Sbjct: 381 KPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 440
Query: 66 LFDKIKQSGLTPDAVTYNT 84
+I+ GL PDAVT+
Sbjct: 441 YLLEIQGRGLKPDAVTFGA 459
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 44/78 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SYS+ I LGK G + +ALE+ N + ++ N I + I S L R G+ +++FD I
Sbjct: 546 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNI 605
Query: 71 KQSGLTPDAVTYNTVYQS 88
+ + + DAV YN V S
Sbjct: 606 QDTTIRSDAVLYNAVISS 623
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 31/67 (46%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
+ G A+ + + ++V CNL+L+ + G + +L L + G PD V
Sbjct: 206 RGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVV 265
Query: 81 TYNTVYQ 87
+YN V +
Sbjct: 266 SYNAVLK 272
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 44/78 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SYS+ I LGK G + +ALE+ N + ++ N I + I S L R G+ +++FD I
Sbjct: 509 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNI 568
Query: 71 KQSGLTPDAVTYNTVYQS 88
+ + + DAV YN V S
Sbjct: 569 QDTTIRSDAVLYNAVISS 586
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 31/67 (46%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
+ G A+ + + ++V CNL+L+ + G + +L L + G PD V
Sbjct: 169 RGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVV 228
Query: 81 TYNTVYQ 87
+YN V +
Sbjct: 229 SYNAVLK 235
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 44/78 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SYS+ I LGK G + +ALE+ N + ++ N I + I S L R G+ +++FD I
Sbjct: 509 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNI 568
Query: 71 KQSGLTPDAVTYNTVYQS 88
+ + + DAV YN V S
Sbjct: 569 QDTTIRSDAVLYNAVISS 586
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 31/67 (46%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
+ G A+ + + ++V CNL+L+ + G + +L L + G PD V
Sbjct: 169 RGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVV 228
Query: 81 TYNTVYQ 87
+YN V +
Sbjct: 229 SYNAVLK 235
>gi|357511073|ref|XP_003625825.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500840|gb|AES82043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 485
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 49/81 (60%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
GK S+S + I K+G +A E YN + + K +VF N+++S R+ KF +L
Sbjct: 174 GKPSVSVCNILIHGFVKSGRFDRAFEFYNQMVKDRIKPDVFTFNILISGYCRDFKFGFAL 233
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
++FD++++ G P+ VT+NT+
Sbjct: 234 EMFDEMRKMGCHPNVVTFNTL 254
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK-I 70
Y ++ L G + KALE+ + + ++ C +++ L GK E +++L +K +
Sbjct: 321 YFVLVEILCGKGEAFKALEVIYELWSKGCVPSLISCIVMIDGLRGLGKIEEAMRLVEKML 380
Query: 71 KQSGLTPDAVTYNTVYQ 87
K+ G+ D VT+N+V Q
Sbjct: 381 KEEGMVLDVVTFNSVLQ 397
>gi|22330179|ref|NP_683419.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
gi|75216707|sp|Q9ZU27.1|PPR76_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g51965, mitochondrial; Flags: Precursor
gi|4220445|gb|AAD12672.1| Similar to gi|3004555 F19F24.14 salt inducible protein homolog from
Arabidopsis thaliana BAC gb|AC003673 [Arabidopsis
thaliana]
gi|332194619|gb|AEE32740.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
Length = 650
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G + +YS+ ++ GK A ++ + + + N+ N++L CL +NG+
Sbjct: 538 MQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGR 597
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
++ L+ K+KQ GLTPD++TY +
Sbjct: 598 TAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G + I +Y+ I G+ G +A+ I+ + K ++ N +++CL +NG
Sbjct: 468 MKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGD 527
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
+ + F ++++ GL PD VTY+T+ +
Sbjct: 528 VDEAHVRFKEMQEKGLNPDVVTYSTLME 555
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 42/78 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY S ++ L G +++A+E+ + I ++ + + N + S L + + LF+K+
Sbjct: 409 SYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKM 468
Query: 71 KQSGLTPDAVTYNTVYQS 88
K+ G +PD TYN + S
Sbjct: 469 KKDGPSPDIFTYNILIAS 486
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 45/82 (54%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
++H + +Y+ I+ +G+ G +A+ ++N + E +NV N ++ L + +
Sbjct: 263 KRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVD 322
Query: 62 SSLKLFDKIKQSGLTPDAVTYN 83
++++F ++ ++G P+ TY+
Sbjct: 323 KAIQVFSRMVETGCRPNEYTYS 344
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 42/79 (53%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
T Y++ LGK +++ + + ++F N++++ R G+ + ++ +
Sbjct: 440 TDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINI 499
Query: 67 FDKIKQSGLTPDAVTYNTV 85
F+++++S PD ++YN++
Sbjct: 500 FEELERSDCKPDIISYNSL 518
>gi|147742776|gb|ABQ50556.1| hypothetical protein [Brassica rapa]
Length = 348
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M +HG + +Y + + K+GN++ AL++ + D+ K V N+I+ L +NG
Sbjct: 212 MVEHGCQPDQFTYGPILNRICKSGNTVSALDLLRKMEDKKVKPQVVTYNMIIDSLCKNGN 271
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
++ +L LF+++++ G+ D +TYN++
Sbjct: 272 YDEALSLFNEMEREGIKADVITYNSL 297
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 41/80 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y+ I L KNGN +AL ++N + E K +V N ++ G+++ +
Sbjct: 253 KPQVVTYNMIIDSLCKNGNYDEALSLFNEMEREGIKADVITYNSLIGGFCNAGRWDDGAQ 312
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L + +TP+ VT++ +
Sbjct: 313 LLRDMITRNITPNVVTFSAL 332
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 44/78 (56%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y++ + LGK G KA+E++ S+ + N N +L C +N + E +LK+F
Sbjct: 576 TVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMF 635
Query: 68 DKIKQSGLTPDAVTYNTV 85
K+ PD +TYNTV
Sbjct: 636 SKMTVMDCKPDVLTYNTV 653
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 45/77 (58%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y ++I + GK+G + KA+E + + + N+ CN L L G+ + +F+ +
Sbjct: 439 TYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGL 498
Query: 71 KQSGLTPDAVTYNTVYQ 87
+++GL PD+VTYN + +
Sbjct: 499 RENGLAPDSVTYNMMMK 515
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 45/80 (56%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ ++ +++ I+ LG+ G +A EI+ + DE ++ +++ L G+ E++ +
Sbjct: 259 RPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKE 318
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LF K+K +G PD V Y T+
Sbjct: 319 LFVKMKANGHKPDQVIYITL 338
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M +G K + + ++ I GK G++ A +++ + +E + ++ +++ CL G+
Sbjct: 919 MSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGR 978
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +L F+++K +GL PD + YN +
Sbjct: 979 VDEALYYFNELKSTGLDPDFIAYNRI 1004
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K S+ +YS+ + LGK +S + + + D + NV+ + + L R GK + + +
Sbjct: 224 KPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYE 283
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F ++ G PD VTY +
Sbjct: 284 IFRRMDDEGCGPDLVTYTVL 303
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ +K K G +A+ + + + + +V + N ++ L + G+ + + ++FD++
Sbjct: 509 TYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRM 568
Query: 71 KQSGLTPDAVTYNTV 85
K L+P VTYNT+
Sbjct: 569 KDMKLSPTVVTYNTL 583
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I LGK+ +AL +YN + + +++ N ++ L G E + ++++++
Sbjct: 1000 AYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEEL 1059
Query: 71 KQSGLTPDAVTYNTV 85
+ +GL PD TYN +
Sbjct: 1060 QLAGLEPDVFTYNAL 1074
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 41/80 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + SY+ + L G +AL +N + + N I++ L ++ + E +L
Sbjct: 960 RPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALA 1019
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L+++++ G+ PD TYN++
Sbjct: 1020 LYNEMRNRGIVPDLYTYNSL 1039
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 38/72 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y I L K G +A+ ++ ++D K N I N++++ + G E++ +LF ++
Sbjct: 895 TYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRM 954
Query: 71 KQSGLTPDAVTY 82
G+ PD +Y
Sbjct: 955 VNEGIRPDLKSY 966
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 40/73 (54%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
+S I L K G +A ++++ + D V N +LS L + G+ + +++LF+ +
Sbjct: 546 NSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIX 605
Query: 73 SGLTPDAVTYNTV 85
+P+ +++NT+
Sbjct: 606 KKCSPNTISFNTL 618
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 39/76 (51%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +++ + L K + +A ++ + + N+ N ++ L+R G+ E +LKL D
Sbjct: 367 VVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLD 426
Query: 69 KIKQSGLTPDAVTYNT 84
++ G+ P A TY T
Sbjct: 427 TMESVGVQPTAYTYIT 442
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 42/81 (51%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+++SY+ I L + + KA +++ + + + F N++L+ ++GK +L+
Sbjct: 787 TLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELY 846
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
++ PDA+TYN V S
Sbjct: 847 KEMISRRCKPDAITYNIVISS 867
>gi|357140426|ref|XP_003571769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Brachypodium distachyon]
Length = 637
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G + +YS+ I+ GK+ A +++ + E N+ N++L CL R GK
Sbjct: 524 MQEKGYDPDVFTYSTLIECFGKSNKVDMACSLFDEMIAEGCIPNIVTYNILLDCLERRGK 583
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ K ++ +KQ GLTPD++TY+ +
Sbjct: 584 TAEAHKHYETMKQQGLTPDSITYSIL 609
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 45/80 (56%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y++ I LGKNG+ +A ++ + ++ +VF + ++ C ++ K + +
Sbjct: 495 KPDVITYNTLINCLGKNGDLDEAHILFKEMQEKGYDPDVFTYSTLIECFGKSNKVDMACS 554
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LFD++ G P+ VTYN +
Sbjct: 555 LFDEMIAEGCIPNIVTYNIL 574
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 46/85 (54%)
Query: 4 HGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESS 63
H ++ S ++ L +G +L+A+++ + + ++ ++ + N++ S L + +
Sbjct: 388 HESGDRDAFISMLEVLCNSGKTLEAIDLLHMMPEKGIDTDIGMYNMVFSALGKLKQVSFI 447
Query: 64 LKLFDKIKQSGLTPDAVTYNTVYQS 88
LFDK+K SG+ PD TYN + S
Sbjct: 448 STLFDKMKASGIAPDLFTYNIMISS 472
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 42/77 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I G+ G KA ++ + S K +V N +++CL +NG + + LF ++
Sbjct: 465 TYNIMISSYGRVGLVDKASGLFEEMEASSCKPDVITYNTLINCLGKNGDLDEAHILFKEM 524
Query: 71 KQSGLTPDAVTYNTVYQ 87
++ G PD TY+T+ +
Sbjct: 525 QEKGYDPDVFTYSTLIE 541
Score = 41.6 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 32/56 (57%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTY 82
K E+Y + + K+++F N++L L + G + + ++F+ +KQ PDA TY
Sbjct: 204 KGFEVYEEMHRKGYKLDIFAYNMLLDALAKAGMVDQAYQVFEDMKQKYCVPDAYTY 259
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNV----FICNLILSCLVRNGKFES 62
T I Y+ LGK LK + +++ D+ + F N+++S R G +
Sbjct: 426 TDIGMYNMVFSALGK----LKQVSFISTLFDKMKASGIAPDLFTYNIMISSYGRVGLVDK 481
Query: 63 SLKLFDKIKQSGLTPDAVTYNTV 85
+ LF++++ S PD +TYNT+
Sbjct: 482 ASGLFEEMEASSCKPDVITYNTL 504
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +YSS I K G KA E+++ + + N+FI N ++ L ++G + + KLFD
Sbjct: 648 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 707
Query: 69 KIKQSGLTPDAVTYNTV 85
+ + GL PD+VTY+T+
Sbjct: 708 GMPEKGLEPDSVTYSTM 724
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 43/74 (58%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I K GN ++AL I+ + +V C+ + L++NG+ + +LK+F ++K
Sbjct: 581 YTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELK 640
Query: 72 QSGLTPDAVTYNTV 85
+ GL PD TY+++
Sbjct: 641 EKGLVPDVFTYSSL 654
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 38/77 (49%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ YS I G +A + + ++ ++F N I+SCL + GK E +
Sbjct: 470 KPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 529
Query: 66 LFDKIKQSGLTPDAVTY 82
+I+ GL PDAVT+
Sbjct: 530 YLLEIQGRGLKPDAVTF 546
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 44/83 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SYS+ I LGK G + +ALE+ N + ++ N I + I L R G+ +++FD I
Sbjct: 498 SYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNI 557
Query: 71 KQSGLTPDAVTYNTVYQSDHITW 93
K + + DAV YN V S W
Sbjct: 558 KDTTIRSDAVLYNAVISSLCKRW 580
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 42/80 (52%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + SY+ +K L G + A E+ + + + N N +++ L + G E +++
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L ++ +G +PD ++Y+TV
Sbjct: 483 LLKQMLVNGCSPDLISYSTV 502
Score = 34.7 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 45/85 (52%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+QQ + ++++ I FL K G +A+E+ + ++ + ++ L + GK
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
E +L+L + + G++P+ + Y+++
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSI 537
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 44/83 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SYS+ I LGK G + +ALE+ N + ++ N I + I L R G+ +++FD I
Sbjct: 498 SYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNI 557
Query: 71 KQSGLTPDAVTYNTVYQSDHITW 93
K + + DAV YN V S W
Sbjct: 558 KDTTIRSDAVLYNAVISSLCKRW 580
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 42/80 (52%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + SY+ +K L G + A E+ + + + N N +++ L + G E +++
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L ++ +G +PD ++Y+TV
Sbjct: 483 LLKQMLVNGCSPDLISYSTV 502
Score = 34.7 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 45/85 (52%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+QQ + ++++ I FL K G +A+E+ + ++ + ++ L + GK
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
E +L+L + + G++P+ + Y+++
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSI 537
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 44/83 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SYS+ I LGK G + +ALE+ N + ++ N I + I L R G+ +++FD I
Sbjct: 498 SYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNI 557
Query: 71 KQSGLTPDAVTYNTVYQSDHITW 93
K + + DAV YN V S W
Sbjct: 558 KDTTIRSDAVLYNAVISSLCKRW 580
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 42/80 (52%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + SY+ +K L G + A E+ + + + N N +++ L + G E +++
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L ++ +G +PD ++Y+TV
Sbjct: 483 LLKQMLVNGCSPDLISYSTV 502
Score = 34.7 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 45/85 (52%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+QQ + ++++ I FL K G +A+E+ + ++ + ++ L + GK
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
E +L+L + + G++P+ + Y+++
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSI 537
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 45/78 (57%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+ I LGK G LKAL+++ S+ + N N +L CL +N + +LK+F
Sbjct: 576 TVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMF 635
Query: 68 DKIKQSGLTPDAVTYNTV 85
++ +PD +TYNT+
Sbjct: 636 CRMTIMNCSPDVLTYNTI 653
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY +I + GK G+ KAL+ + + ++ CN L L G+ + +F+ I
Sbjct: 439 SYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDI 498
Query: 71 KQSGLTPDAVTYNTVYQ 87
GL+PD+VTYN + +
Sbjct: 499 HNCGLSPDSVTYNMMMK 515
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 43/78 (55%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + + Y+ I GK GN A +++ + E + ++ +++ CL G+ + ++
Sbjct: 925 KPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVH 984
Query: 66 LFDKIKQSGLTPDAVTYN 83
F+++K +GL PD V+YN
Sbjct: 985 YFEELKLTGLDPDTVSYN 1002
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 42/80 (52%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ +I +Y+ I+ LG+ G A I ++ DE +V +++ L GK + + +
Sbjct: 259 RPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKE 318
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L+ K++ S PD VTY T+
Sbjct: 319 LYTKMRASSHKPDLVTYITL 338
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
+S I L K G +A +++ + D V N++++ L + GK +L LF +K+
Sbjct: 546 NSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKE 605
Query: 73 SGLTPDAVTYNTV 85
SG P+ VT+N +
Sbjct: 606 SGCPPNTVTFNAL 618
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ +K K G KA ++ + E + ++ + N ++ L + G+ + + ++F ++
Sbjct: 509 TYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRL 568
Query: 71 KQSGLTPDAVTYNTV 85
K L P VTYN +
Sbjct: 569 KDLKLAPTVVTYNIL 583
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 37/75 (49%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I +Y+ + GK+ + E+YN + K N+ N+I+S LV++ +L L+
Sbjct: 822 NIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLY 881
Query: 68 DKIKQSGLTPDAVTY 82
+I +P TY
Sbjct: 882 YEIISGDFSPTPCTY 896
Score = 34.3 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 39/80 (48%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K S+ +YS+ + LG+ ++ +++ + + N++ + + L R G+ + +
Sbjct: 224 KPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYG 283
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+ ++ G PD VTY +
Sbjct: 284 ILKTMEDEGCGPDVVTYTVL 303
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 44/83 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SYS+ I LGK G + +ALE+ N + ++ N I + I L R G+ +++FD I
Sbjct: 498 SYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNI 557
Query: 71 KQSGLTPDAVTYNTVYQSDHITW 93
K + + DAV YN V S W
Sbjct: 558 KDTTIRSDAVLYNAVISSLCKRW 580
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 42/80 (52%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + SY+ +K L G + A E+ + + + N N +++ L + G E +++
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L ++ +G +PD ++Y+TV
Sbjct: 483 LLKQMLVNGCSPDLISYSTV 502
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 45/85 (52%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+QQ + ++++ I FL K G +A+E+ + ++ + ++ L + GK
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
E +L+L + + G++P+ + Y+++
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSI 537
>gi|15221411|ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74850, chloroplastic; AltName: Full=Protein PLASTID
TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535 DUF17 domains [Arabidopsis thaliana]
gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical protein; 81052-84129 [Arabidopsis thaliana]
gi|332197518|gb|AEE35639.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
Length = 862
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 45/74 (60%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I LG+ G K LE+++ + + +VF +++ RNG++E+SL+L D++K
Sbjct: 144 YTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMK 203
Query: 72 QSGLTPDAVTYNTV 85
++P +TYNTV
Sbjct: 204 NEKISPSILTYNTV 217
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNG-KFESSLKL 66
S+ SY++ I G+NG +LE+ + + +E ++ N +++ R G +E L L
Sbjct: 175 SVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGL 234
Query: 67 FDKIKQSGLTPDAVTYNTV 85
F +++ G+ PD VTYNT+
Sbjct: 235 FAEMRHEGIQPDIVTYNTL 253
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 45/79 (56%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I+SY+ ++ K+G+ +A+ +++ + N +++L+ ++G+++ +LF
Sbjct: 317 ITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFL 376
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++K S PDA TYN + +
Sbjct: 377 EMKSSNTDPDAATYNILIE 395
>gi|255661102|gb|ACU25720.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 311
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 50/79 (63%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I++Y+ I+ LGK G + A + + + E +++ + N +++ L + G+ + + KLF+
Sbjct: 216 IATYNVIIQGLGKMGRADLANAVLDKLMKEGGYLDIVMYNTLINALGKAGRIDEANKLFE 275
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++K SG+ PD VTYNT+ +
Sbjct: 276 QMKASGINPDVVTYNTLIE 294
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 45/77 (58%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +YS + GK G + KALE++ ++ + + N+++SCL + GK + +L+L +
Sbjct: 335 VFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLE 394
Query: 69 KIKQSGLTPDAVTYNTV 85
+ + G+ PD TYN V
Sbjct: 395 DMNRKGIMPDCRTYNIV 411
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I LGK G +ALE+ + + + N+++ L G++E + F +K
Sbjct: 373 YNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMK 432
Query: 72 QSGLTPDAVTYNTV 85
+ +PD VTYNT+
Sbjct: 433 RRKHSPDVVTYNTL 446
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Query: 1 MQQHG--KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNG 58
++Q G K + S+ + + FL K + AL ++ + K +V +CN ++ C R G
Sbjct: 151 LKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLG 210
Query: 59 KFESSLKLFDKIKQSGLTPDAVTY 82
+ +L + DA TY
Sbjct: 211 MLRQARRLLHHMTAHACARDAFTY 234
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 37/77 (48%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
++++ + I L K G ALE + N +I N ++S R+G+ + +LF
Sbjct: 475 LTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQ 534
Query: 69 KIKQSGLTPDAVTYNTV 85
+ + PD++TY +
Sbjct: 535 DMIECSCFPDSITYTIL 551
Score = 34.7 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 1 MQQHGKTSISS--YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNG 58
+ +H ++S+ Y+ I+ + G +A +++ S + +VF NL+++ L ++
Sbjct: 256 LARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLIA-LCKSK 314
Query: 59 KFESSLKLFDKIKQSGLTPDAVTYN 83
+ E +L LF + +Q G+ D TY+
Sbjct: 315 QLEEALTLFQEAEQGGVVLDVFTYS 339
>gi|297842227|ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
gi|297334836|gb|EFH65254.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
Length = 863
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 45/74 (60%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I LG+ G K LE+++ + + +VF +++ RNG++E+SL+L D++K
Sbjct: 144 YTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMK 203
Query: 72 QSGLTPDAVTYNTV 85
++P +TYNTV
Sbjct: 204 NDKISPSILTYNTV 217
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNG-KFESSLKL 66
S+ SY++ I G+NG +LE+ + + ++ ++ N +++ R G +E L L
Sbjct: 175 SVFSYTALINAYGRNGRYETSLELLDRMKNDKISPSILTYNTVINACARGGLDWEGLLGL 234
Query: 67 FDKIKQSGLTPDAVTYNTV 85
F +++ G+ PD VTYNT+
Sbjct: 235 FAEMRHEGIQPDIVTYNTL 253
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 45/79 (56%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I+SY+ ++ K+G+ +A+ +++ + N +++L+ ++G+++ +LF
Sbjct: 317 ITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFL 376
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++K S PDA TYN + +
Sbjct: 377 EMKSSNTDPDAATYNILIE 395
>gi|255661104|gb|ACU25721.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 310
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 50/79 (63%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I++Y+ I+ LGK G + A + + + E +++ + N +++ L + G+ + + KLF+
Sbjct: 215 IATYNVIIQGLGKMGRADLANAVLDKLMKEGGYLDIVMYNTLINALGKAGRIDEANKLFE 274
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++K SG+ PD VTYNT+ +
Sbjct: 275 QMKASGINPDVVTYNTLIE 293
>gi|350410772|ref|XP_003489134.1| PREDICTED: pentatricopeptide repeat-containing protein 1-like
[Bombus impatiens]
Length = 478
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%)
Query: 3 QHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFES 62
+ + S Y + IK N N AL I + + + DK N++I L+LS + G E
Sbjct: 4 KRERLSYRDYCTIIKSHLHNKNLQLALNILDLMKENGDKPNLYIYRLLLSGFAQQGDVEQ 63
Query: 63 SLKLFDKIKQSGLTPDAVTYNTV 85
KLF IK+ GLTP+A YN++
Sbjct: 64 CFKLFKNIKERGLTPNAAVYNSL 86
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 46/82 (56%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y +I + GK+G+S+ ALE + + + N+ CN L L + G+ + +
Sbjct: 432 KPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQ 491
Query: 66 LFDKIKQSGLTPDAVTYNTVYQ 87
+F +K GL PD+VTYN + +
Sbjct: 492 IFYGLKDIGLVPDSVTYNMMMK 513
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 43/80 (53%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ +Y++ + LGKNG +A+E++ + + N N + CL +N + +LK
Sbjct: 572 KPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALK 631
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+ K+ G PD TYNT+
Sbjct: 632 MLFKMMDMGCVPDVFTYNTI 651
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M +G + + + Y+ I GK G + A ++ + E + ++ ++++ CL G+
Sbjct: 919 MSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR 978
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ L F ++K+SGL PD V YN +
Sbjct: 979 VDEGLHYFRELKESGLNPDVVCYNLI 1004
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
+S I L K +A +++ + + K V N +L+ L +NGK + +++LF+ + Q
Sbjct: 544 NSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ 603
Query: 73 SGLTPDAVTYNTVY----QSDHIT 92
G P+ +T+NT++ ++D +T
Sbjct: 604 KGCPPNTITFNTLFDCLCKNDEVT 627
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + +YS + L G + L + + + +V NLI++ L + + E +L
Sbjct: 960 RPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALV 1019
Query: 66 LFDKIKQS-GLTPDAVTYNTV 85
LF+++K+S G+TPD TYN++
Sbjct: 1020 LFNEMKKSRGITPDLYTYNSL 1040
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 43/75 (57%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ +K K G +A+++ + + + + +V + N +++ L + + + + K+F ++
Sbjct: 507 TYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 566
Query: 71 KQSGLTPDAVTYNTV 85
K+ L P VTYNT+
Sbjct: 567 KEMKLKPTVVTYNTL 581
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y I L K+G +A +++ ++D + N I N++++ + G+ +++ LF ++
Sbjct: 895 TYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRM 954
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ PD TY+ +
Sbjct: 955 VKEGVRPDLKTYSVL 969
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL-F 67
+++Y+ + GK+G + EIY ++ + N N+++S LV+ G + +L L +
Sbjct: 822 VATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYY 881
Query: 68 DKIKQSGLTPDAVTY 82
D + +P A TY
Sbjct: 882 DLMSDRDFSPTACTY 896
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ +++ I+ LG+ G +A EI + DE +V +++ L K + + +
Sbjct: 257 KPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKE 316
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F K+K PD VTY T+
Sbjct: 317 VFAKMKTGRHKPDRVTYITL 336
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 37/80 (46%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ S+ +YSS + LGK + + + + K NV+ + + L R GK + +
Sbjct: 222 RPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYE 281
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+ ++ G PD VTY +
Sbjct: 282 ILKRMDDEGCGPDVVTYTVL 301
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 36/72 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I LG G +A +IYN I + NVF N ++ +GK E + ++ +
Sbjct: 1036 TYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1095
Query: 71 KQSGLTPDAVTY 82
G +P+ TY
Sbjct: 1096 VTGGFSPNTGTY 1107
Score = 34.3 bits (77), Expect = 9.2, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G + +++ + L K GN +A + + D+ N+ N ++ L+R +
Sbjct: 356 MEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHR 415
Query: 60 FESSLKLFDKIKQSGLTPDAVTY 82
+ +L++FD ++ G+ P A TY
Sbjct: 416 LDDALEIFDNMESLGVKPTAYTY 438
>gi|255582957|ref|XP_002532249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528067|gb|EEF30143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 507
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y ++IK L K G AL+IY ++ ++ K +V ICN I+ L + +L+
Sbjct: 250 KPDLFTYGTFIKALTKKGKLGTALKIYRAMWEKQCKPDVVICNCIIDALCFKNRVPEALE 309
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F ++ Q G P+ TYN++
Sbjct: 310 VFREMSQQGCLPNGATYNSL 329
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 46/82 (56%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y +I + GK+G+S+ ALE + + + N+ CN L L + G+ + +
Sbjct: 430 KPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQ 489
Query: 66 LFDKIKQSGLTPDAVTYNTVYQ 87
+F +K GL PD+VTYN + +
Sbjct: 490 IFYGLKDIGLVPDSVTYNMMMK 511
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 43/80 (53%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ +Y++ + LGKNG +A+E++ + + N N + CL +N + +LK
Sbjct: 570 KPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALK 629
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+ K+ G PD TYNT+
Sbjct: 630 MLFKMMDMGCVPDVFTYNTI 649
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 39/74 (52%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I GK G + A ++ + E + ++ ++++ CL G+ + L F ++K
Sbjct: 929 YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELK 988
Query: 72 QSGLTPDAVTYNTV 85
+SGL PD V YN +
Sbjct: 989 ESGLNPDVVCYNLI 1002
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
+S I L K +A +++ + + K V N +L+ L +NGK + +++LF+ + Q
Sbjct: 542 NSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ 601
Query: 73 SGLTPDAVTYNTVY----QSDHIT 92
G P+ +T+NT++ ++D +T
Sbjct: 602 KGCPPNTITFNTLFDCLCKNDEVT 625
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + +YS + L G + L + + + +V NLI++ L ++ + E +L
Sbjct: 958 RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALV 1017
Query: 66 LFDKIKQS-GLTPDAVTYNTV 85
LF+++K S G+TPD TYN++
Sbjct: 1018 LFNEMKTSRGITPDLYTYNSL 1038
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 42/80 (52%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ +++ I+ LG+ G +A EI + DE +V +++ L K + + +
Sbjct: 255 KPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKE 314
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F+K+K PD VTY T+
Sbjct: 315 VFEKMKTGRHKPDRVTYITL 334
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 43/75 (57%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ +K K G +A+++ + + + + +V + N +++ L + + + + K+F ++
Sbjct: 505 TYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564
Query: 71 KQSGLTPDAVTYNTV 85
K+ L P VTYNT+
Sbjct: 565 KEMKLKPTVVTYNTL 579
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL-F 67
+++Y+ + GK+G + E+Y ++ + N N+++S LV+ G + +L L +
Sbjct: 820 VATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYY 879
Query: 68 DKIKQSGLTPDAVTY 82
D + +P A TY
Sbjct: 880 DLMSDRDFSPTACTY 894
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y I L K+G +A +++ + D + N I N++++ + G+ +++ LF ++
Sbjct: 893 TYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRM 952
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ PD TY+ +
Sbjct: 953 VKEGVRPDLKTYSVL 967
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 37/80 (46%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ S+ +YSS + LGK + + + + K NV+ + + L R GK + +
Sbjct: 220 RPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYE 279
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+ ++ G PD VTY +
Sbjct: 280 ILKRMDDEGCGPDVVTYTVL 299
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 36/72 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I LG G +A +IYN I + NVF N ++ +GK E + ++ +
Sbjct: 1034 TYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Query: 71 KQSGLTPDAVTY 82
G +P+ TY
Sbjct: 1094 VTGGFSPNTGTY 1105
>gi|413926076|gb|AFW66008.1| hypothetical protein ZEAMMB73_411794 [Zea mays]
Length = 633
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G + +YS I+ GK+ A +++ + + N+ N++L CL R GK
Sbjct: 521 MQEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMVAQGCIPNIVTYNILLDCLERRGK 580
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ K ++ +KQ GLTPD++TY+ +
Sbjct: 581 TTEAHKFYETLKQQGLTPDSITYSIL 606
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 46/80 (57%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y+S I LGKNG+ +A ++ + ++ +VF ++++ C ++ K + +
Sbjct: 492 KPDVVTYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMACS 551
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LFD++ G P+ VTYN +
Sbjct: 552 LFDEMVAQGCIPNIVTYNIL 571
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 43/79 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+ I G+ G KA E++ + D S K +V N +++CL +NG + + LF
Sbjct: 460 VFTYNIMISSFGRVGLVDKASELFEEMEDGSCKPDVVTYNSMINCLGKNGDLDEAHMLFK 519
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
+++ G PD TY+ + +
Sbjct: 520 DMQEKGYDPDVFTYSILIE 538
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 34/56 (60%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTY 82
K E+Y + + K+++F N++L+ L + G + + ++F+ +KQ+ PDA TY
Sbjct: 201 KGFEVYEKMRRKGYKLDIFAYNMLLNALAKAGMVDQAYQVFEDMKQNYCDPDAYTY 256
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 39/79 (49%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
T + Y+ LGK +Y+++ +VF N+++S R G + + +L
Sbjct: 423 TDVGMYNMIFSALGKLKQVSFMSSLYDTMRANGVVPDVFTYNIMISSFGRVGLVDKASEL 482
Query: 67 FDKIKQSGLTPDAVTYNTV 85
F++++ PD VTYN++
Sbjct: 483 FEEMEDGSCKPDVVTYNSM 501
Score = 34.7 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 43/85 (50%)
Query: 4 HGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESS 63
H K ++ S ++ L + +A+++ + + ++ +V + N+I S L + +
Sbjct: 385 HEKGDRYAFVSMLEALCNAEKTTEAIDLLHMMPEKGITTDVGMYNMIFSALGKLKQVSFM 444
Query: 64 LKLFDKIKQSGLTPDAVTYNTVYQS 88
L+D ++ +G+ PD TYN + S
Sbjct: 445 SSLYDTMRANGVVPDVFTYNIMISS 469
>gi|255661116|gb|ACU25727.1| pentatricopeptide repeat-containing protein [Citharexylum
montevidense]
Length = 307
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 50/79 (63%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I++Y+ I+ LGK G + A + + + E +++ + N +++ L + G+ + + KLF
Sbjct: 212 IATYNVIIQGLGKMGRADLANAVLDKLMKEGGYLDIVMYNTLINVLGKAGRIDEANKLFQ 271
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++K+SG+ PD VTYNT+ +
Sbjct: 272 QMKESGINPDVVTYNTLIE 290
>gi|242064536|ref|XP_002453557.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
gi|241933388|gb|EES06533.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
Length = 390
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G + +YS I+ GK+ A +++ + + N+ N++L CL R+GK
Sbjct: 278 MQEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMIAQGCVPNIVTYNILLDCLERHGK 337
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ KL++ +KQ GL PD++TY+ +
Sbjct: 338 TREAHKLYETLKQQGLAPDSITYSIL 363
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 46/80 (57%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y+S I LGKNG+ +A ++ + ++ +VF ++++ C ++ K + +
Sbjct: 249 KPDVITYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMACS 308
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LFD++ G P+ VTYN +
Sbjct: 309 LFDEMIAQGCVPNIVTYNIL 328
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I G+ G KA E++ + D S K +V N +++CL +NG + + LF +
Sbjct: 219 TYNIMISSFGRVGLVDKASELFEEMDDSSCKPDVITYNSMINCLGKNGDLDEAHMLFKDM 278
Query: 71 KQSGLTPDAVTYNTVYQ 87
++ G PD TY+ + +
Sbjct: 279 QEKGYDPDVFTYSILIE 295
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 44/85 (51%)
Query: 4 HGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESS 63
H K ++ S ++ L + +A+++ + + ++ +V + N+I S L + +
Sbjct: 142 HEKGDRDAFVSMLEALCNAEKTAEAIDLLHMMPEKGITTDVGMYNIIFSALGKLKQVSFM 201
Query: 64 LKLFDKIKQSGLTPDAVTYNTVYQS 88
L+DK+K +G+ PD TYN + S
Sbjct: 202 SSLYDKMKANGVAPDVFTYNIMISS 226
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M + G T + Y+ LGK +Y+ + +VF N+++S R G
Sbjct: 173 MPEKGITTDVGMYNIIFSALGKLKQVSFMSSLYDKMKANGVAPDVFTYNIMISSFGRVGL 232
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + +LF+++ S PD +TYN++
Sbjct: 233 VDKASELFEEMDDSSCKPDVITYNSM 258
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 49/78 (62%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
SI +Y+S I ++G +A+E+ N + + K++VF +LS VR GK ES++++F
Sbjct: 173 SIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVF 232
Query: 68 DKIKQSGLTPDAVTYNTV 85
++++ +G P+ T+N +
Sbjct: 233 EEMRTAGCKPNICTFNAL 250
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G T S+++Y+S + ++ N ++ E+ I + K ++ N ++ RNG+
Sbjct: 480 MKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGR 539
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+ + +F ++++SGL PD +TYNT S
Sbjct: 540 MKEASHIFSEMRESGLIPDVITYNTFVAS 568
Score = 41.6 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 38/70 (54%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGL 75
I LGK G A + N++ + + +V+ +++ V NG++ ++ +F K+++ G
Sbjct: 5 INMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEGC 64
Query: 76 TPDAVTYNTV 85
P +TYN +
Sbjct: 65 KPTLITYNVI 74
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSL-KALEIYNSITDESDKVNVFICNLILSCLVRNG 58
M++ G K ++ +Y+ + GK G K ++ + + + + N +++C R
Sbjct: 59 MEEEGCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGS 118
Query: 59 KFESSLKLFDKIKQSGLTPDAVTYNTV 85
+E + +F+ +K G PD VTYNT+
Sbjct: 119 LYEEAAAVFEDMKSMGFVPDKVTYNTL 145
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNG-KFESSLKLF 67
+ +Y+S I NG +A+ ++ + +E K + N+IL+ + G + LF
Sbjct: 33 VYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKITGLF 92
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ +K +G+ PD TYNT+
Sbjct: 93 EGMKNAGILPDEYTYNTL 110
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 10/82 (12%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSI-----TDESDKVNVFICNLILSCLVRNGKFESS 63
I ++++ + G+NG + ++ + E D N I S R G F+ +
Sbjct: 279 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLI-----SAYSRCGSFDQA 333
Query: 64 LKLFDKIKQSGLTPDAVTYNTV 85
+ ++ ++ +G+TPD TYN V
Sbjct: 334 MAMYKRMLDTGITPDLSTYNAV 355
>gi|242036493|ref|XP_002465641.1| hypothetical protein SORBIDRAFT_01g042790 [Sorghum bicolor]
gi|241919495|gb|EER92639.1| hypothetical protein SORBIDRAFT_01g042790 [Sorghum bicolor]
Length = 691
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 46/75 (61%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS+ I G+ GNS AL +Y+ E +++ IC+ ++ +G F+ +L +F+++
Sbjct: 235 TYSAVIDAYGRAGNSEAALRLYDRARAEKWQLDPVICSTVIKVHSISGNFDGALNVFEEM 294
Query: 71 KQSGLTPDAVTYNTV 85
K +G+ P+ V YNT+
Sbjct: 295 KATGVKPNLVVYNTM 309
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 32/68 (47%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SYSS + N L A I N + + K N+F+ ++ C + G+ + +K F +
Sbjct: 413 SYSSMVTLYSSTANVLGAEGILNEMVEAGFKPNIFVLTSLIRCYGKVGRTDDVVKSFGML 472
Query: 71 KQSGLTPD 78
+ + PD
Sbjct: 473 QDLCIIPD 480
>gi|255661128|gb|ACU25733.1| pentatricopeptide repeat-containing protein [Casselia glaziovii]
Length = 313
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 49/79 (62%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I++Y+ I+ LGK G + A + + + E +++ + N +++ L + G+ + + KLF
Sbjct: 218 IATYNVIIQGLGKMGRADLANAVLDKLRKEGGYLDIVMYNTLINALGKAGRIDEASKLFQ 277
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++K SG+ PD VTYNT+ +
Sbjct: 278 QMKASGINPDVVTYNTLIE 296
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 45/79 (56%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y+ I K G+ A + +N + + S K +V CN +++ L NGK + +LKLF+
Sbjct: 556 TTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFES 615
Query: 70 IKQSGLTPDAVTYNTVYQS 88
+ G D +TYNT+ Q+
Sbjct: 616 WVEKGKKVDVITYNTLIQT 634
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 45/80 (56%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + + ++ + L NG KAL+++ S ++ KV+V N ++ + ++G +++L
Sbjct: 587 KPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALH 646
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
F ++ GL PDA TYN V
Sbjct: 647 FFADMEARGLQPDAFTYNVV 666
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 35/64 (54%)
Query: 25 SLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNT 84
S AL + + ++ K + N+++ L ++G+ E +L +K+ GL PD +TYNT
Sbjct: 361 SSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNT 420
Query: 85 VYQS 88
+ +
Sbjct: 421 LIHA 424
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 37/77 (48%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ I K GN KA + + + K++ F N +L L + ++E + L
Sbjct: 415 VITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQ 474
Query: 69 KIKQSGLTPDAVTYNTV 85
Q G PD V+Y TV
Sbjct: 475 SPPQRGFMPDEVSYGTV 491
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 43/78 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
SIS+Y++ IK L + G +A++ N + ++ + N+I+ + G E++ +
Sbjct: 519 SISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFH 578
Query: 68 DKIKQSGLTPDAVTYNTV 85
+K+ ++ PD VT NT+
Sbjct: 579 NKMVENSFKPDVVTCNTL 596
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 40/78 (51%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY + + K NS AL +++ + ++ ++ N ++ L R G+ + ++ +++
Sbjct: 487 SYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNEL 546
Query: 71 KQSGLTPDAVTYNTVYQS 88
+ GL PD TYN + +
Sbjct: 547 MEKGLVPDDTTYNIIIHA 564
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + + G +A ++ ++T + +++ N++ + L + GK + + +L D++
Sbjct: 276 TYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEM 335
Query: 71 KQSG-LTPDAVTYNTV 85
++ G L PD VTYNT+
Sbjct: 336 ERLGTLLPDVVTYNTL 351
>gi|255661050|gb|ACU25694.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 429
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
I++Y+ I+ LGK G + A + + E +++ + N +++ L + G+ + + KL
Sbjct: 332 ADIATYNVIIQGLGKMGRADLANAVLEKLMKEGGYLDIVMYNTLINALGKAGRIDEANKL 391
Query: 67 FDKIKQSGLTPDAVTYNTVYQ 87
F+++K SG+ PD VTYNT+ +
Sbjct: 392 FEQMKASGINPDVVTYNTLIE 412
>gi|356526577|ref|XP_003531893.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Glycine max]
Length = 878
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS+ IK K +A+++Y + E K +V + ++ L +NG ESSL+L D +
Sbjct: 474 TYSTLIKIYTKGRMYAEAMDVYRELKQEGMKTDVVFYSALIDALCKNGLIESSLRLLDVM 533
Query: 71 KQSGLTPDAVTYNTV 85
+ G P+ VTYN++
Sbjct: 534 TEKGSRPNVVTYNSI 548
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 37/73 (50%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
S+ I+ LG+ AL+++ V+ + ++S L RN +F ++ L + +
Sbjct: 194 SNMIRTLGRLKKIELALDLFEESRTRGYGNTVYSFSAMISALGRNNRFSEAVSLLRSMGK 253
Query: 73 SGLTPDAVTYNTV 85
GL P+ VTYN +
Sbjct: 254 FGLEPNLVTYNAI 266
Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNG-KFESSLKL 66
++ S+S+ I LG+N +A+ + S+ + N+ N I+ + FE +K
Sbjct: 224 TVYSFSAMISALGRNNRFSEAVSLLRSMGKFGLEPNLVTYNAIIDAGAKGELTFEIVVKF 283
Query: 67 FDKIKQSGLTPDAVTYNTVYQS 88
+++ +G PD +TYN++ ++
Sbjct: 284 LEEMIAAGCMPDRLTYNSLLKT 305
>gi|255661088|gb|ACU25713.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 429
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
I++Y+ I+ LGK G + A + + E +++ + N +++ L + G+ + + KL
Sbjct: 332 ADIATYNVIIQGLGKMGRADLANAVLEKLMKEGGYLDIVMYNTLINALGKAGRIDEANKL 391
Query: 67 FDKIKQSGLTPDAVTYNTVYQ 87
F+++K SG+ PD VTYNT+ +
Sbjct: 392 FEQMKASGINPDVVTYNTLIE 412
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 45/74 (60%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y ++ L KNG +A+E++N + + K+++ N ++ L + GK E++ +LF+K+
Sbjct: 455 YGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLP 514
Query: 72 QSGLTPDAVTYNTV 85
Q L PD VTYN +
Sbjct: 515 QEELQPDVVTYNIM 528
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K I ++ I L K G A E++ + E + +V N+++ R G+ +
Sbjct: 484 KLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANI 543
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
LF K++++G TPD +TY T+ +
Sbjct: 544 LFQKMEKNGCTPDKITYATLIRG 566
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G T ++ SY+S I G +A ++N + ++ + NV N+++ L + GK
Sbjct: 268 MKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGK 327
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+ L + + Q G+ P+ +TYN++ +
Sbjct: 328 VIEAKDLLEVMIQRGIVPNLLTYNSLIEG 356
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 51/92 (55%), Gaps = 7/92 (7%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESD------KVNVFICNLILSC 53
MQ+ G T + +Y + +K L + GN AL+++ + ++S K V ++I+
Sbjct: 192 MQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDA 251
Query: 54 LVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
L ++ + + + LF+++K G+TP ++Y ++
Sbjct: 252 LCKDRREDEARDLFEEMKVQGMTPTVISYTSL 283
>gi|255661048|gb|ACU25693.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 429
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
I++Y+ I+ LGK G + A + + E +++ + N +++ L + G+ + + KL
Sbjct: 332 ADIATYNVIIQGLGKMGRADLANAVLEKLMKEGGYLDIVMYNTLINALGKAGRIDEANKL 391
Query: 67 FDKIKQSGLTPDAVTYNTVYQ 87
F+++K SG+ PD VTYNT+ +
Sbjct: 392 FEQMKASGINPDVVTYNTLIE 412
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 47/75 (62%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++++ L +NG+ AL++ + + E +VF N++++CL +NG+ E + + +++
Sbjct: 292 TYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 351
Query: 71 KQSGLTPDAVTYNTV 85
+ G PD T+NT+
Sbjct: 352 VERGCLPDITTFNTL 366
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 48/77 (62%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I+++++ I L +AL++ +T + +V+ N++++ L + G + +L+LF+
Sbjct: 360 ITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFE 419
Query: 69 KIKQSGLTPDAVTYNTV 85
++K SG TPD VTYNT+
Sbjct: 420 EMKSSGCTPDEVTYNTL 436
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 23 GNSLKALE-IYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVT 81
G+ +K LE +Y+ + + K +V N ++ L R + +++ + +++ SG+ PD T
Sbjct: 163 GSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETT 222
Query: 82 YNTVYQ 87
+ T+ Q
Sbjct: 223 FTTLMQ 228
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 40/78 (51%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S + K G+ KA +I ++T +V+V +++ L + G+ + +LKL +
Sbjct: 537 TYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGM 596
Query: 71 KQSGLTPDAVTYNTVYQS 88
+ G+ YN V QS
Sbjct: 597 RIKGMRATPKAYNPVIQS 614
Score = 34.7 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 38/82 (46%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + +Y + I L K G + AL++ + + + N ++ L R ++
Sbjct: 567 EVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMN 626
Query: 66 LFDKIKQSGLTPDAVTYNTVYQ 87
LF ++ + G PDA TY V++
Sbjct: 627 LFREMTEVGEPPDAFTYKIVFR 648
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 45/74 (60%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y ++ L KNG +A+E++N + + K+++ N ++ L + GK E++ +LF+K+
Sbjct: 447 YGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLP 506
Query: 72 QSGLTPDAVTYNTV 85
Q L PD VTYN +
Sbjct: 507 QEELQPDVVTYNIM 520
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K I ++ I L K G A E++ + E + +V N+++ R G+ +
Sbjct: 476 KLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANI 535
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
LF K++++G TPD +TY T+ +
Sbjct: 536 LFQKMEKNGCTPDKITYATLIRG 558
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 35/62 (56%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVY 86
+A ++N + ++ + NV N+++ L + GK + L + + Q G+ P+ +TYN++
Sbjct: 287 EAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLI 346
Query: 87 QS 88
+
Sbjct: 347 EG 348
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 51/92 (55%), Gaps = 7/92 (7%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESD------KVNVFICNLILSC 53
MQ+ G T + +Y + +K L + GN AL+++ + ++S K V ++I+
Sbjct: 192 MQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDA 251
Query: 54 LVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
L ++ + + + LF+++K G+TP ++Y ++
Sbjct: 252 LCKDRREDEARDLFEEMKVQGMTPTVISYTSL 283
>gi|255661122|gb|ACU25730.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 431
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 50/79 (63%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I++Y+ I+ LGK G + A + + + E +++ + N +++ L + G+ + + KLF
Sbjct: 336 IATYNVIIQGLGKMGRADLANAVLDKLMKEGGYLDIVMYNTLINALGKAGRIDEANKLFH 395
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++K SG++PD VTYNT+ +
Sbjct: 396 QMKASGISPDVVTYNTLIE 414
>gi|255661042|gb|ACU25690.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 429
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
I++Y+ I+ LGK G + A + + E +++ + N +++ L + G+ + + KL
Sbjct: 332 ADIATYNVIIQGLGKMGRADLANAVLEKLMKEGGYLDIVMYNTLINALGKAGRIDEANKL 391
Query: 67 FDKIKQSGLTPDAVTYNTVYQ 87
F+++K SG+ PD VTYNT+ +
Sbjct: 392 FEQMKASGINPDVVTYNTLIE 412
>gi|356567150|ref|XP_003551784.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Glycine max]
Length = 875
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS+ IK K +A+++Y + E K +V + ++ L +NG ESSL+L D +
Sbjct: 473 TYSTLIKIYTKGRMYAEAMDVYRELKQEGMKTDVVFYSALIDALCKNGLIESSLRLLDVM 532
Query: 71 KQSGLTPDAVTYNTV 85
+ G P+ VTYN++
Sbjct: 533 TEKGSRPNVVTYNSI 547
>gi|255661082|gb|ACU25710.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 429
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
I++Y+ I+ LGK G + A + + E +++ + N +++ L + G+ + + KL
Sbjct: 332 ADIATYNVIIQGLGKMGRADLANAVLEKLMKEGGYLDIVMYNTLINALGKAGRIDEANKL 391
Query: 67 FDKIKQSGLTPDAVTYNTVYQ 87
F+++K SG+ PD VTYNT+ +
Sbjct: 392 FEQMKASGINPDVVTYNTLIE 412
>gi|255661054|gb|ACU25696.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 429
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 49/79 (62%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I++Y+ I+ LGK G + A + + E +++ + N +++ L + G+ + + KLF+
Sbjct: 334 IATYNVIIQGLGKMGRADLANAVLEKLMKEGGYLDIVMYNTLINALGKAGRIDEANKLFE 393
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++K SG+ PD VTYNT+ +
Sbjct: 394 QMKASGINPDVVTYNTLIE 412
>gi|255661052|gb|ACU25695.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 429
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
I++Y+ I+ LGK G + A + + E +++ + N +++ L + G+ + + KL
Sbjct: 332 ADIATYNVIIQGLGKMGRADLANAVLEKLMKEGGYLDIVMYNTLINALGKAGRIDEANKL 391
Query: 67 FDKIKQSGLTPDAVTYNTVYQ 87
F+++K SG+ PD VTYNT+ +
Sbjct: 392 FEQMKASGINPDVVTYNTLIE 412
>gi|255661040|gb|ACU25689.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 429
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
I++Y+ I+ LGK G + A + + E +++ + N +++ L + G+ + + KL
Sbjct: 332 ADIATYNVIIQGLGKMGRADLANAVLEKLMKEGGYLDIVMYNTLINALGKAGRIDEANKL 391
Query: 67 FDKIKQSGLTPDAVTYNTVYQ 87
F+++K SG+ PD VTYNT+ +
Sbjct: 392 FEQMKASGINPDVVTYNTLIE 412
>gi|255661084|gb|ACU25711.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 429
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
I++Y+ I+ LGK G + A + + E +++ + N +++ L + G+ + + KL
Sbjct: 332 ADIATYNVIIQGLGKMGRADLANAVLEKLMKEGGYLDIVMYNTLINALGKAGRIDEANKL 391
Query: 67 FDKIKQSGLTPDAVTYNTVYQ 87
F+++K SG+ PD VTYNT+ +
Sbjct: 392 FEQMKASGINPDVVTYNTLIE 412
>gi|255661080|gb|ACU25709.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 429
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
I++Y+ I+ LGK G + A + + E +++ + N +++ L + G+ + + KL
Sbjct: 332 ADIATYNVIIQGLGKMGRADLANAVLEKLMKEGGYLDIVMYNTLINALGKAGRIDEANKL 391
Query: 67 FDKIKQSGLTPDAVTYNTVYQ 87
F+++K SG+ PD VTYNT+ +
Sbjct: 392 FEQMKASGINPDVVTYNTLIE 412
>gi|255661074|gb|ACU25706.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 429
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 50/81 (61%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
I++Y+ I+ LG+ G + A + + +E +++ + N +++ L + GK + + KL
Sbjct: 332 ADIATYNVIIQGLGEMGRADLANAVLEKLMNEGGYLDIVMYNTLINALGKAGKIDEANKL 391
Query: 67 FDKIKQSGLTPDAVTYNTVYQ 87
F+++K SG+ PD VTYNT+ +
Sbjct: 392 FEQMKASGINPDVVTYNTLIE 412
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M HG + + SY+ IK L K GN +++ + + + K N F N++++ L + GK
Sbjct: 514 MLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGK 573
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+L+L ++ GLTPD VTYNT+
Sbjct: 574 VRDALELSKEMLNQGLTPDIVTYNTL 599
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G K I +Y++ I L N +A I+ ++ +E N N ++ L+RNG+
Sbjct: 444 MKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGR 503
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
++ L+L ++ G D ++YN + ++
Sbjct: 504 WQEGLRLASEMLLHGCQLDVISYNGLIKA 532
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 39/66 (59%)
Query: 23 GNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTY 82
G +A E+Y + + +V ++++ L + G+F S++++ D++++ G P+ VTY
Sbjct: 327 GKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTY 386
Query: 83 NTVYQS 88
+T+ S
Sbjct: 387 STLLHS 392
Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G +I +YS+ + +NG A + + + + +N N I+ L ++GK
Sbjct: 374 MEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGK 433
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + +L ++K G PD TYNT+
Sbjct: 434 LDQATRLVQEMKSQGCKPDICTYNTM 459
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY+ I L K G ALE+ + ++ ++ N +++ L + G ++L L +K+
Sbjct: 560 SYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKL 619
Query: 71 KQSGLTPDAVTYNTVYQSDHITW 93
+ PD VTYN + I+W
Sbjct: 620 PNENVHPDIVTYNIL-----ISW 637
>gi|388499386|gb|AFK37759.1| unknown [Lotus japonicus]
Length = 500
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G K S +Y+ I GK+G S AL+++N + K N+ +++ R G
Sbjct: 258 MKRDGCKPSTETYTMLINLYGKDGKSFMALKVFNEMLSHKCKPNICTYTALVNAFAREGL 317
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
E + ++F++++++GL PD +YN + ++
Sbjct: 318 CEKAEEVFEQMQEAGLEPDVYSYNALMEA 346
>gi|224136033|ref|XP_002327364.1| predicted protein [Populus trichocarpa]
gi|222835734|gb|EEE74169.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 45/77 (58%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +YS+ I+ GK A +++ + E N+ N++L CL R+G+ ++ L+
Sbjct: 558 VVTYSTLIECFGKTDKVEMACRLFDEMLAEGCYPNIVTYNILLDCLERSGRTAEAVDLYA 617
Query: 69 KIKQSGLTPDAVTYNTV 85
K+KQ GL PD++TY+ +
Sbjct: 618 KLKQQGLIPDSITYSVL 634
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+Q G + +Y+ I G+ G +A++I+ + D K + N +++CL +NG
Sbjct: 479 MKQDGPLPDTFTYNILISSFGRAGKVDEAIKIFEELEDSDYKPDTCSYNSLINCLGKNGH 538
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
+ + F ++ + GL PD VTY+T+ +
Sbjct: 539 LDEAHMKFKEMCEKGLNPDVVTYSTLIE 566
Score = 41.6 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 45/81 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S S Y+ ++ L K G++ +A ++ ++ + ++ + C +L CL GK ++ L
Sbjct: 382 SRSIYAYLVRTLKKLGHASEAHRLFCNMWNCHERGDRDACVSMLECLCSAGKTTEAIDLL 441
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
KI + G++ D V YNTV+ +
Sbjct: 442 GKIHEKGVSVDTVMYNTVFSA 462
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 39/74 (52%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ LGK ++Y + + + F N+++S R GK + ++K+F++++
Sbjct: 456 YNTVFSALGKLKQISPLHDLYEKMKQDGPLPDTFTYNILISSFGRAGKVDEAIKIFEELE 515
Query: 72 QSGLTPDAVTYNTV 85
S PD +YN++
Sbjct: 516 DSDYKPDTCSYNSL 529
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 39/72 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y ++ ++ N+ K +Y + + +++F N++L LV++ + + + K+F+ +
Sbjct: 213 TYKCLVQAYLRSRNTEKGFAVYLEMKKKGHMLDIFAFNMLLDALVKDSEVDHAYKVFEDM 272
Query: 71 KQSGLTPDAVTY 82
K+ PD TY
Sbjct: 273 KRKHCEPDEYTY 284
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 38/75 (50%)
Query: 14 SYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQS 73
S ++ L G + +A+++ I ++ V+ + N + S L + + L++K+KQ
Sbjct: 423 SMLECLCSAGKTTEAIDLLGKIHEKGVSVDTVMYNTVFSALGKLKQISPLHDLYEKMKQD 482
Query: 74 GLTPDAVTYNTVYQS 88
G PD TYN + S
Sbjct: 483 GPLPDTFTYNILISS 497
>gi|224087130|ref|XP_002308078.1| predicted protein [Populus trichocarpa]
gi|222854054|gb|EEE91601.1| predicted protein [Populus trichocarpa]
Length = 373
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 49/81 (60%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
G+ S+ Y+ I K G +A+ +Y+ + + K +VF N+++S RN FE +L
Sbjct: 71 GRPSVVVYNILINGCVKCGEHDRAIGVYDRMLKDRVKPDVFTFNILISSYCRNYMFELAL 130
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
+LF ++K+ G +P+ V++NT+
Sbjct: 131 ELFREMKEKGCSPNVVSFNTL 151
>gi|255661110|gb|ACU25724.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 431
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
I++Y+ I+ LGK G + A + + + E +++ + N +++ L + G+ + + KL
Sbjct: 334 ADIATYNVIIQGLGKMGRADLANAVLDKLMKEGGYLDIVMYNTLINALGKAGRIDEANKL 393
Query: 67 FDKIKQSGLTPDAVTYNTVYQ 87
F ++K SG+ PD VTYNT+ +
Sbjct: 394 FQQMKASGINPDVVTYNTLIE 414
>gi|255661100|gb|ACU25719.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 309
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 49/79 (62%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I++Y+ I+ LGK G + A + + + E +++ + N +++ L + G+ + + KLF
Sbjct: 214 IATYNVIIQGLGKMGRADLANAVLDKLMKEGGYLDIVMYNTLINALGKAGRIDEANKLFQ 273
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++K SG+ PD VTYNT+ +
Sbjct: 274 QMKTSGINPDVVTYNTLIE 292
>gi|255661120|gb|ACU25729.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 429
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
I++Y+ I+ LGK G + A + + + E +++ + N +++ L + G+ + + KL
Sbjct: 334 ADIATYNVIIQGLGKMGRADLANAVLDKLMKEGGYLDIVMYNTLINALGKAGRMDEANKL 393
Query: 67 FDKIKQSGLTPDAVTYNTVYQ 87
F ++K SG+ PD VTYNT+ +
Sbjct: 394 FQQMKGSGINPDVVTYNTLIE 414
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 49/81 (60%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+ IK LGK+G A ++ ++ + K +V + N +++ + G+ E +LKLF
Sbjct: 270 TVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALKLF 329
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
D+++ P+ VTYNTV ++
Sbjct: 330 DQMRSLKCAPNVVTYNTVIKA 350
Score = 47.8 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 45/81 (55%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
G++S Y+ IK LGK G +A++++N + +V+ N ++S LVR G E +
Sbjct: 443 GRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAF 502
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
++++G TPD ++N +
Sbjct: 503 SALRTMEENGCTPDLNSHNII 523
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKV-NVFICNLILSCLVRNGKFESSL 64
K + S+Y+S I L + G+ K E+Y+ + +E D + ++++S V+ G+ + ++
Sbjct: 163 KPTASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCFPDTMTYSVLVSAFVKLGRDDYAI 222
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
+LFD++K +GL P A Y T+
Sbjct: 223 RLFDEMKANGLHPTAKIYTTL 243
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+++G T ++S++ + L + G +A E++ + D K + N IL L R+G
Sbjct: 508 MEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGM 567
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
FE + KL ++ G D +TY+++ ++
Sbjct: 568 FEEAAKLMREMGSRGFEYDHITYSSILEA 596
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 39/76 (51%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y S I LGK A E++ + + + + I +++ L + G+ ++ LF++
Sbjct: 413 AAYCSLINALGKAKRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNE 472
Query: 70 IKQSGLTPDAVTYNTV 85
+K+ G PD YN +
Sbjct: 473 MKKIGCNPDVYAYNAL 488
>gi|168049914|ref|XP_001777406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671255|gb|EDQ57810.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 570
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 47/77 (61%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y + ++ G+ G A+ I++ + + + N+++SCL R G+ +LK+F ++
Sbjct: 150 TYGTMVRLFGRAGYISAAVSIFDEMKGSGIQPGSVVYNIMISCLGRAGRMGHALKVFQEM 209
Query: 71 KQSGLTPDAVTYNTVYQ 87
KQ+G+ P+AVT +TV +
Sbjct: 210 KQAGVKPNAVTLSTVME 226
Score = 40.8 bits (94), Expect = 0.090, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 38/73 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS+ I GK G +A+ +Y S+ K + ++ R G +++ +FD++
Sbjct: 115 TYSTMIDVYGKVGKYDEAVALYESVKKSGWKPDKVTYGTMVRLFGRAGYISAAVSIFDEM 174
Query: 71 KQSGLTPDAVTYN 83
K SG+ P +V YN
Sbjct: 175 KGSGIQPGSVVYN 187
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 13/83 (15%)
Query: 24 NSLK----ALEIYNSITDESD-KVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPD 78
N+LK AL ++ + E + +N++ N++L L R ++E S ++ + + +G+ PD
Sbjct: 18 NTLKSWKVALSLFKWLQAEQNFNLNIYTYNVMLKVLRRGQQWELSQQIAEDMINAGIRPD 77
Query: 79 AVTYNTV--------YQSDHITW 93
+TY+T+ YQ + W
Sbjct: 78 NITYSTLISCANRCNYQDAAMAW 100
>gi|255661118|gb|ACU25728.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 426
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
I++Y+ I+ LGK G + A + + + E +++ + N +++ L + G+ + + KL
Sbjct: 334 ADIATYNVLIQGLGKMGRADLANAVLDKLMKEGGYLDIVMYNTLINALGKAGRIDEANKL 393
Query: 67 FDKIKQSGLTPDAVTYNTVYQ 87
F ++K SG+ PD VTYNT+ +
Sbjct: 394 FQQMKGSGINPDVVTYNTLIE 414
>gi|297852926|ref|XP_002894344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340186|gb|EFH70603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 650
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G + +YS+ ++ GK A ++ + + + N+ N++L CL ++G+
Sbjct: 538 MQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKSGR 597
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
++ L+ K+KQ GLTPD++TY +
Sbjct: 598 TAEAVDLYTKMKQQGLTPDSITYTVL 623
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 1 MQQHGKTS-ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G + I +Y+ I G+ G +A+ I+ + K ++ N +++CL +NG
Sbjct: 468 MKKDGPSPDIFTYNILISSFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGD 527
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
+ + F ++++ GL PD VTY+T+ +
Sbjct: 528 VDEAHVRFKEMQEKGLNPDVVTYSTLME 555
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 46/84 (54%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
++H + SY+ I+ +G+ G +A+ ++N + E +NV N ++ L + +
Sbjct: 263 KRHCRRDEYSYTIMIRTMGRIGKYDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVD 322
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
++++F ++ ++G P+ TY+ V
Sbjct: 323 KAIQVFSRMVETGCRPNEYTYSLV 346
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY S ++ L G +++A+E+ + I ++ + + N + S L + + LF+K+
Sbjct: 409 SYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKM 468
Query: 71 KQSGLTPDAVTYNTVYQS 88
K+ G +PD TYN + S
Sbjct: 469 KKDGPSPDIFTYNILISS 486
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 42/79 (53%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
T Y++ LGK +++ + + ++F N+++S R G+ + ++ +
Sbjct: 440 TDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILISSFGRVGEVDEAINI 499
Query: 67 FDKIKQSGLTPDAVTYNTV 85
F+++++S PD ++YN++
Sbjct: 500 FEELERSDCKPDIISYNSL 518
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K I +Y+ + L K+ KA +++ + + + + +++ + R GK++ ++
Sbjct: 235 KLDIFAYNMLLDALAKDE---KACQVFEDMKKRHCRRDEYSYTIMIRTMGRIGKYDEAVG 291
Query: 66 LFDKIKQSGLTPDAVTYNTVYQ 87
LF+++ GLT + V YNT+ Q
Sbjct: 292 LFNEMITEGLTLNVVGYNTLMQ 313
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 43/77 (55%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ SY I K GN KA I++ + +E NV I N++L R+G+ E + +L D
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686
Query: 69 KIKQSGLTPDAVTYNTV 85
++ GL P+AVTY T+
Sbjct: 687 EMSVKGLHPNAVTYCTI 703
Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y + +K + +G+ A I + + NV I ++ ++N +F ++++ ++
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 71 KQSGLTPDAVTYNTV 85
K+ G+ PD YN++
Sbjct: 479 KEQGIAPDIFCYNSL 493
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDES----DKVNVFICNLILSCLVRNGKFES 62
+S + +++ I ++ K G + E+ N + D S K N N+++ L + G E+
Sbjct: 764 SSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEA 823
Query: 63 SLKLFDKIKQSGLTPDAVTYNTV 85
+ +LF +++ + L P +TY ++
Sbjct: 824 AKELFHQMQNANLMPTVITYTSL 846
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ + L KN A EI+ + + +VF ++++ + G + + +FD++
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 71 KQSGLTPDAVTYNTV 85
+ GLTP+ + YN +
Sbjct: 654 VEEGLTPNVIIYNML 668
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 43/77 (55%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ SY I K GN KA I++ + +E NV I N++L R+G+ E + +L D
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686
Query: 69 KIKQSGLTPDAVTYNTV 85
++ GL P+AVTY T+
Sbjct: 687 EMSVKGLHPNAVTYCTI 703
Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y + +K + +G+ A I + + NV I ++ ++N +F ++++ ++
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 71 KQSGLTPDAVTYNTV 85
K+ G+ PD YN++
Sbjct: 479 KEQGIAPDIFCYNSL 493
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDES----DKVNVFICNLILSCLVRNGKFES 62
+S + +++ I ++ K G + E+ N + D S K N N+++ L + G E+
Sbjct: 764 SSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEA 823
Query: 63 SLKLFDKIKQSGLTPDAVTYNTV 85
+ +LF +++ + L P +TY ++
Sbjct: 824 AKELFHQMQNANLMPTVITYTSL 846
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ + L KN A EI+ + + +VF ++++ + G + + +FD++
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 71 KQSGLTPDAVTYNTV 85
+ GLTP+ + YN +
Sbjct: 654 VEEGLTPNVIIYNML 668
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 43/77 (55%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ SY I K GN KA I++ + +E NV I N++L R+G+ E + +L D
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686
Query: 69 KIKQSGLTPDAVTYNTV 85
++ GL P+AVTY T+
Sbjct: 687 EMSVKGLHPNAVTYCTI 703
Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y + +K + +G+ A I + + NV I ++ ++N +F ++++ ++
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 71 KQSGLTPDAVTYNTV 85
K+ G+ PD YN++
Sbjct: 479 KEQGIAPDIFCYNSL 493
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDES----DKVNVFICNLILSCLVRNGKFES 62
+S + +++ I ++ K G + E+ N + D S K N N+++ L + G E+
Sbjct: 764 SSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEA 823
Query: 63 SLKLFDKIKQSGLTPDAVTYNTV 85
+ +LF +++ + L P +TY ++
Sbjct: 824 AKELFHQMQNANLMPTVITYTSL 846
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ + L KN A EI+ + + +VF ++++ + G + + +FD++
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 71 KQSGLTPDAVTYNTV 85
+ GLTP+ + YN +
Sbjct: 654 VEEGLTPNVIIYNML 668
>gi|255661068|gb|ACU25703.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 429
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 50/81 (61%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
I++Y+ I+ LG+ G + A + + +E +++ + N +++ L + G+ + + KL
Sbjct: 332 ADIATYNVIIQGLGEMGRADLANAVLEKLMNEGGYLDIVMYNTLINALGKAGRIDEANKL 391
Query: 67 FDKIKQSGLTPDAVTYNTVYQ 87
F+++K SG+ PD VTYNT+ +
Sbjct: 392 FEQMKASGINPDVVTYNTLIE 412
>gi|255661078|gb|ACU25708.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 429
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 50/81 (61%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
I++Y+ I+ LG+ G + A + + +E +++ + N +++ L + G+ + + KL
Sbjct: 332 ADIATYNVIIQGLGEMGRADLANAVLEKLMNEGGYLDIVMYNTLINALGKAGRIDEANKL 391
Query: 67 FDKIKQSGLTPDAVTYNTVYQ 87
F+++K SG+ PD VTYNT+ +
Sbjct: 392 FEQMKASGINPDVVTYNTLIE 412
>gi|356546852|ref|XP_003541836.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Glycine max]
Length = 481
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 45/80 (56%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K I +Y+++IK L K G AL+++ + D+ K +V ICN I+ L + +L+
Sbjct: 239 KPDIFTYATFIKALTKKGKLGTALKLFRGMWDKGGKPDVVICNCIIDALCFKKRIPEALE 298
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F + + G P+ TYN++
Sbjct: 299 IFCDMSERGCEPNVATYNSL 318
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 30/63 (47%)
Query: 23 GNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTY 82
GNS +A ++ I K ++F + L + GK ++LKLF + G PD V
Sbjct: 221 GNSHEAKRVWRDIVASPCKPDIFTYATFIKALTKKGKLGTALKLFRGMWDKGGKPDVVIC 280
Query: 83 NTV 85
N +
Sbjct: 281 NCI 283
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y+ I GN KA + +N + + K +V+ CN++L L R G E +LKLF+
Sbjct: 564 TTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNT 623
Query: 70 IKQSGLTPDAVTYNTVYQS 88
+ G D VTYNT+ S
Sbjct: 624 LVSKGKDIDVVTYNTIISS 642
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 40/70 (57%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGL 75
++ L + G KAL+++N++ + ++V N I+S L + GKFE++ L +++ L
Sbjct: 605 LRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKL 664
Query: 76 TPDAVTYNTV 85
PD TY +
Sbjct: 665 GPDQYTYKVI 674
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 30 EIYNSITDESDK----VNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
E+Y S+ +E DK N N+IL + + G + DK++++GL+PD VTYNT+
Sbjct: 371 EVY-SLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTL 429
>gi|255661126|gb|ACU25732.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 431
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Query: 1 MQQHGKT----SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVR 56
+Q G+T I++Y+ I+ LGK G + A + + E +++ + N +++ L +
Sbjct: 324 LQAMGETVNPADIATYNVIIQGLGKMGRADLANVVLEKLIKEGGYLDIVMYNTLINALGK 383
Query: 57 NGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
G+ + + KLF ++K SG+ PD VTYNT+
Sbjct: 384 AGRIDEANKLFQQMKSSGINPDVVTYNTL 412
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y I + GK+G+ KALE + + N+ CN L L G+ + +F+++
Sbjct: 441 TYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNEL 500
Query: 71 KQSGLTPDAVTYNTVYQ 87
K SGL PD+VTYN + +
Sbjct: 501 KSSGLAPDSVTYNMMMK 517
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 43/78 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+ + LGK G KA++++ S+ N N +L CL +N + + +LK+F
Sbjct: 578 TVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMF 637
Query: 68 DKIKQSGLTPDAVTYNTV 85
K+ PD +T+NT+
Sbjct: 638 YKMTTMNCRPDVLTFNTI 655
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 42/80 (52%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ +I +Y+ I+ LG++G +A I + D+ +V +++ L K + ++
Sbjct: 261 RPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMC 320
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LF K+K S PD VTY T+
Sbjct: 321 LFTKMKSSSHKPDKVTYVTL 340
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ + GK G+ A E + + E + ++ +++ L G+ + +L F+K+K
Sbjct: 933 YNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLK 992
Query: 72 QSGLTPDAVTYN 83
Q+GL PD V YN
Sbjct: 993 QAGLDPDLVAYN 1004
Score = 37.7 bits (86), Expect = 0.93, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 40/80 (50%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + SY+ + L G AL + + ++ NL+++ L R+ + E +L
Sbjct: 962 RPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALS 1021
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LF +++ G+ PD TYN++
Sbjct: 1022 LFHEMQNRGIVPDLYTYNSL 1041
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ +K K G +A+++ + ++ + +V + N ++ L + G+ E + ++F ++
Sbjct: 511 TYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRM 570
Query: 71 KQSGLTPDAVTYNTV 85
++ L P VTYN +
Sbjct: 571 EEMNLAPTVVTYNIL 585
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 42/73 (57%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
+S I L K G +A +++ + + + V N++L+ L + G+ + +++LF+ +
Sbjct: 548 NSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNG 607
Query: 73 SGLTPDAVTYNTV 85
G +P+ +T+NT+
Sbjct: 608 HGCSPNTITFNTL 620
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 38/80 (47%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K S+ ++S+ + GK N + + + + N++ + + L R+GK + + +
Sbjct: 226 KPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYR 285
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+ ++ G PD VTY +
Sbjct: 286 IMKRMDDDGCGPDVVTYTVL 305
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 37/72 (51%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I GK+G + ++Y+ + K N N+++S LV++ + + ++ L+ +
Sbjct: 827 TYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNL 886
Query: 71 KQSGLTPDAVTY 82
+P T+
Sbjct: 887 VSGDFSPTPCTF 898
>gi|15222950|ref|NP_172835.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174769|sp|Q9LMH5.1|PPR42_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g13800
gi|8778410|gb|AAF79418.1|AC068197_28 F16A14.3 [Arabidopsis thaliana]
gi|332190949|gb|AEE29070.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 883
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++HG + YS+ I+ KN N KA++++N + + ++N I + IL C + G
Sbjct: 317 MEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGN 376
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
F + LF + +++ ++ D V YN + +
Sbjct: 377 FSEAYDLFKEFRETNISLDRVCYNVAFDA 405
>gi|255661124|gb|ACU25731.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 431
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 49/81 (60%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
I++Y+ ++ LGK G + A + + + E +++ + N +++ L + G+ + + KL
Sbjct: 334 ADIATYNVIVQGLGKMGRADLANAVLDKLMKEGGYLDIVMYNTLINALGKAGRIBEANKL 393
Query: 67 FDKIKQSGLTPDAVTYNTVYQ 87
F ++K SG+ PD VTYNT+ +
Sbjct: 394 FQQMKASGINPDVVTYNTLIE 414
>gi|357506483|ref|XP_003623530.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498545|gb|AES79748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 653
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 42/71 (59%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
++ I+FL K G + ALEI N + ++ K ++ ++LS +V+ G + +LFD+I
Sbjct: 259 TNMIRFLVKEGKGMDALEILNQLKEDGIKPDIVCYTIVLSGIVKEGDYVKLDELFDEILV 318
Query: 73 SGLTPDAVTYN 83
GL PD TYN
Sbjct: 319 LGLVPDVYTYN 329
>gi|302762967|ref|XP_002964905.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
gi|300167138|gb|EFJ33743.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
Length = 773
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 48/87 (55%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
QQ K + Y+ I +G+ G K EI+ + + K NV+ +++ RNG++E
Sbjct: 75 QQWCKPTEHIYTIMIGIMGREGLLEKCSEIFEDMPENDVKWNVYAFTALINAYGRNGQYE 134
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+SL L ++K+ + P+ +TYNTV +
Sbjct: 135 ASLHLLARMKKEQVEPNLITYNTVLNA 161
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNG-KFESSL 64
K ++ ++++ I G+NG +L + + E + N+ N +L+ + G +E L
Sbjct: 114 KWNVYAFTALINAYGRNGQYEASLHLLARMKKEQVEPNLITYNTVLNACSKGGLDWEGLL 173
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
LF +++ G+ PD +TYNT+
Sbjct: 174 NLFAQMRHEGIQPDLITYNTL 194
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G + +YS+ ++ G G + +++ + D S V N ++ G
Sbjct: 284 MQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKDLSTPPTVATYNSLIQVFGEGGY 343
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
F+ S+ LF + SG+ PD TY+ +
Sbjct: 344 FQESINLFHDMVDSGVKPDDATYSAL 369
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 43/78 (55%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SYS+ I LGK G + +ALE+ N + ++ N I + I S L + G+ +++FD I
Sbjct: 507 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNI 566
Query: 71 KQSGLTPDAVTYNTVYQS 88
+ + DAV YN V S
Sbjct: 567 QDVTIRSDAVLYNAVISS 584
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 38/74 (51%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
YSS L K G + ++++++I D + + + + N ++S L + G + +++ +
Sbjct: 543 YSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMV 602
Query: 72 QSGLTPDAVTYNTV 85
SG P+ TY +
Sbjct: 603 SSGCMPNESTYTIL 616
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+++G++ ++ +YS+YI L + G AL+ S+ + VNV+ N I+ L + G+
Sbjct: 281 MERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGE 340
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +LK+ +++K G++PD TY+ +
Sbjct: 341 LDEALKVLEEMKSCGISPDVYTYSIL 366
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
S++ S + K G + ALE +N + + ++ CN+I+ R G+ E +L L ++
Sbjct: 466 SNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNE 525
Query: 70 IKQSGLTPDAVTYNTV 85
++ G+ P+ TYN V
Sbjct: 526 MQTQGIFPNLFTYNAV 541
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 40/78 (51%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ YS+ I K NS KAL +Y + ++ ++++ L + + LF
Sbjct: 569 SVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLF 628
Query: 68 DKIKQSGLTPDAVTYNTV 85
K+ ++G+TPD ++Y +V
Sbjct: 629 KKMTENGMTPDKISYTSV 646
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M ++G T SY+S I + G+ KA ++N + V ++ + +
Sbjct: 631 MTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNR 690
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + L D++K+ G+TPD VTYN +
Sbjct: 691 IDIADMLIDEMKRKGITPDVVTYNVL 716
>gi|449507908|ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 685
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ G + +YS+ I+ GK A +++ + + N+ N++L CL R G+
Sbjct: 572 MQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGR 631
Query: 60 FESSLKLFDKIKQSGLTPDAVTY 82
++ L+ K+++ GLTPD++TY
Sbjct: 632 TAETVDLYAKLREQGLTPDSITY 654
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 1 MQQHGK-TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+Q G I +Y+ I LG+ G +A+E++ + K ++ N +++CL +NG
Sbjct: 502 MKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGD 561
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
+ + F +++ GL PD VTY+T+ +
Sbjct: 562 VDEAHMRFLEMQDKGLNPDVVTYSTLIE 589
Score = 40.0 bits (92), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 44/85 (51%)
Query: 4 HGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESS 63
H +Y S ++ L + G +++A+E+ + + ++ + + N +LS L + +
Sbjct: 436 HDGGDRDAYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHL 495
Query: 64 LKLFDKIKQSGLTPDAVTYNTVYQS 88
L++K+KQ G PD TYN + S
Sbjct: 496 HDLYEKMKQDGPFPDIFTYNILISS 520
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 44/79 (55%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
T Y++ + LGK ++Y + + ++F N+++S L R GK + ++++
Sbjct: 474 TDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEV 533
Query: 67 FDKIKQSGLTPDAVTYNTV 85
F++++ S PD ++YN++
Sbjct: 534 FEELESSDCKPDIISYNSL 552
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 47/78 (60%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +YSS + +L KNG S +A +I++S+T + ++ +L + G+ S KLF
Sbjct: 278 NVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLF 337
Query: 68 DKIKQSGLTPDAVTYNTV 85
D + + G+ PD +TYNT+
Sbjct: 338 DLMVRIGVKPDIITYNTL 355
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 40/77 (51%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S + +G +A+ + + + NV + +++ L +NG+ + K+FD +
Sbjct: 246 TYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM 305
Query: 71 KQSGLTPDAVTYNTVYQ 87
+ GL PD TY T+ Q
Sbjct: 306 TKRGLEPDIATYRTLLQ 322
Score = 34.3 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 41/82 (50%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K I +Y++ I G +A ++ S+ K ++ +++ R + + +L
Sbjct: 346 KPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALA 405
Query: 66 LFDKIKQSGLTPDAVTYNTVYQ 87
LF ++ SG++P+ +TYN + Q
Sbjct: 406 LFKEMVSSGVSPNIITYNIILQ 427
>gi|302809589|ref|XP_002986487.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
gi|300145670|gb|EFJ12344.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
Length = 773
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 48/87 (55%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
QQ K + Y+ I +G+ G K EI+ + + K NV+ +++ RNG++E
Sbjct: 75 QQWCKPTEHIYTIMIGIMGREGLLEKCSEIFEDMPENDVKWNVYAFTALINAYGRNGQYE 134
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+SL L ++K+ + P+ +TYNTV +
Sbjct: 135 ASLHLLARMKKERVEPNLITYNTVLNA 161
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNG-KFESSL 64
K ++ ++++ I G+NG +L + + E + N+ N +L+ + G +E L
Sbjct: 114 KWNVYAFTALINAYGRNGQYEASLHLLARMKKERVEPNLITYNTVLNACSKGGLDWEGLL 173
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
LF +++ G+ PD +TYNT+
Sbjct: 174 NLFAQMRHEGIQPDLITYNTL 194
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G + +YS+ ++ G G + +++ + + S V N ++ G
Sbjct: 284 MQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKELSTPPTVATYNSLIQVFGEGGY 343
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
F+ S+ LF + SG+ PD TY+ +
Sbjct: 344 FQESINLFHDMVDSGVKPDDATYSAL 369
>gi|449436637|ref|XP_004136099.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
mitochondrial-like [Cucumis sativus]
gi|449509164|ref|XP_004163514.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
mitochondrial-like [Cucumis sativus]
Length = 547
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 41/76 (53%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
+SY+ I KNGN +L Y+ + +V + N + L R F +LK+ +K
Sbjct: 287 TSYTHMISCFSKNGNLFDSLRFYDQMKKRDWIPSVEVYNSLAYVLTRENCFNEALKILEK 346
Query: 70 IKQSGLTPDAVTYNTV 85
IK+ GL PD+ TYN++
Sbjct: 347 IKEVGLRPDSTTYNSL 362
>gi|110742004|dbj|BAE98941.1| putative salt-inducible protein [Arabidopsis thaliana]
Length = 497
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 48/81 (59%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
GK ++ Y++ + K+G+ KAL Y + E K +V N++++ R+ KF+ +L
Sbjct: 189 GKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLAL 248
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
LF ++K+ G P+ V++NT+
Sbjct: 249 DLFREMKEKGCEPNVVSFNTL 269
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y S ++ L +++A+E+ + + C ++ L ++G+ E + +K+
Sbjct: 336 YGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMM 395
Query: 72 QSGLTPDAVTYNTVY----QSDHIT 92
+G+ PD+VT+N + SDH T
Sbjct: 396 NAGILPDSVTFNLLLGDLCSSDHST 420
>gi|48525335|gb|AAT44969.1| At2g36240 [Arabidopsis thaliana]
gi|50198948|gb|AAT70477.1| At2g36240 [Arabidopsis thaliana]
Length = 379
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 48/81 (59%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
GK ++ Y++ + K+G+ KAL Y + E K +V N++++ R+ KF+ +L
Sbjct: 71 GKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLAL 130
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
LF ++K+ G P+ V++NT+
Sbjct: 131 DLFREMKEKGCEPNVVSFNTL 151
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y S ++ L +++A+E+ + + C ++ L ++G+ E + +K+
Sbjct: 218 YGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMM 277
Query: 72 QSGLTPDAVTYNTVYQ----SDHIT 92
+G+ PD+VT+N + + SDH T
Sbjct: 278 NAGILPDSVTFNLLLRDLCSSDHST 302
>gi|79568177|ref|NP_181166.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206301|sp|Q9SJN2.1|PP187_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g36240
gi|4510352|gb|AAD21441.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330254126|gb|AEC09220.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 497
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 48/81 (59%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
GK ++ Y++ + K+G+ KAL Y + E K +V N++++ R+ KF+ +L
Sbjct: 189 GKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLAL 248
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
LF ++K+ G P+ V++NT+
Sbjct: 249 DLFREMKEKGCEPNVVSFNTL 269
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y S ++ L +++A+E+ + + C ++ L ++G+ E + +K+
Sbjct: 336 YGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMM 395
Query: 72 QSGLTPDAVTYNTVYQ----SDHIT 92
+G+ PD+VT+N + + SDH T
Sbjct: 396 NAGILPDSVTFNLLLRDLCSSDHST 420
>gi|255661092|gb|ACU25715.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 415
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 49/79 (62%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I++Y+ I+ LGK G + A + + E +++ + N +++ L + G+ + + KLF+
Sbjct: 320 IATYNVIIQGLGKMGRADLANAVLEKLMKEGGYLDIVMYNTLINALGKAGRIDEANKLFE 379
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++K SG+ PD VTYNT+ +
Sbjct: 380 QMKASGINPDVVTYNTLIE 398
>gi|255661064|gb|ACU25701.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 429
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 49/79 (62%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I++Y+ I+ LGK G + A + + E +++ + N +++ L + G+ + + KLF+
Sbjct: 334 IATYNVIIQGLGKMGRADLANAVLEKLMKEGGYLDIVMYNTLINALGKAGRIDEANKLFE 393
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++K SG+ PD VTYNT+ +
Sbjct: 394 QMKASGINPDVVTYNTLIE 412
>gi|255661060|gb|ACU25699.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
gi|255661062|gb|ACU25700.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 429
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 49/79 (62%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I++Y+ I+ LGK G + A + + E +++ + N +++ L + G+ + + KLF+
Sbjct: 334 IATYNVIIQGLGKMGRADLANAVLEKLMKEGGYLDIVMYNTLINALGKAGRIDEANKLFE 393
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++K SG+ PD VTYNT+ +
Sbjct: 394 QMKASGINPDVVTYNTLIE 412
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SYS+ I LGK G + +ALE+ N + ++ NV + + L R G+ + +++FD I
Sbjct: 478 SYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNI 537
Query: 71 KQSGLTPDAVTYNTVYQS 88
+ + + DAV YN V S
Sbjct: 538 QDATIRSDAVLYNAVISS 555
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
++++ I FL K G +A+E+ + ++ + ++ L + GK E +L+L + +
Sbjct: 443 TFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVM 502
Query: 71 KQSGLTPDAVTYNTV 85
G+TP+ +TY+++
Sbjct: 503 INKGITPNVITYSSM 517
>gi|255661044|gb|ACU25691.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 429
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 49/79 (62%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I++Y+ I+ LGK G + A + + E +++ + N +++ L + G+ + + KLF+
Sbjct: 334 IATYNVIIQGLGKMGRADLANAVLEKLMKEGGYLDIVMYNTLINALGKAGRIDEANKLFE 393
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++K SG+ PD VTYNT+ +
Sbjct: 394 QMKASGINPDVVTYNTLIE 412
>gi|449465242|ref|XP_004150337.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 690
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ G + +YS+ I+ GK A +++ + + N+ N++L CL R G+
Sbjct: 577 MQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGR 636
Query: 60 FESSLKLFDKIKQSGLTPDAVTY 82
++ L+ K+++ GLTPD++TY
Sbjct: 637 TAETVDLYAKLREQGLTPDSITY 659
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 1 MQQHGK-TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+Q G I +Y+ I LG+ G +A+E++ + K ++ N +++CL +NG
Sbjct: 507 MKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGD 566
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
+ + F +++ GL PD VTY+T+ +
Sbjct: 567 VDEAHMRFLEMQDKGLNPDVVTYSTLIE 594
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 44/85 (51%)
Query: 4 HGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESS 63
H +Y S ++ L + G +++A+E+ + + ++ + + N +LS L + +
Sbjct: 441 HDGGDRDAYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHL 500
Query: 64 LKLFDKIKQSGLTPDAVTYNTVYQS 88
L++K+KQ G PD TYN + S
Sbjct: 501 HDLYEKMKQDGPFPDIFTYNILISS 525
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 44/79 (55%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
T Y++ + LGK ++Y + + ++F N+++S L R GK + ++++
Sbjct: 479 TDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEV 538
Query: 67 FDKIKQSGLTPDAVTYNTV 85
F++++ S PD ++YN++
Sbjct: 539 FEELESSDCKPDIISYNSL 557
>gi|356530205|ref|XP_003533674.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
mitochondrial-like [Glycine max]
Length = 499
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ Y++ I+FL K G + AL+I N + K++V ++LS +V G++ +LFD
Sbjct: 261 VMDYTNMIRFLVKEGRGMDALDILNQQKQDGIKLDVVSYTMVLSGIVAEGEYVMLDELFD 320
Query: 69 KIKQSGLTPDAVTYN 83
++ GL PDA TYN
Sbjct: 321 EMLVIGLIPDAYTYN 335
>gi|297738433|emb|CBI27634.3| unnamed protein product [Vitis vinifera]
Length = 355
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 50/79 (63%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I++Y+ I+ LGK G + A + + + + +++ + N +++ L + G+ + + KLF+
Sbjct: 218 IATYNVIIQGLGKMGRADLASAVLDMLMKQGGYLDIVMYNTLINALGKAGRIDEATKLFE 277
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
+++ SG+ PD VT+NT+ +
Sbjct: 278 QMRSSGINPDVVTFNTLIE 296
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
M+Q G I Y++ I LGK G +A +++ + +V N ++ + G+
Sbjct: 245 MKQGGYLDIVMYNTLINALGKAGRIDEATKLFEQMRSSGINPDVVTFNTLIEIHAKAGQL 304
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+++ K + +G +P+ VT T+
Sbjct: 305 KAAYKFLKLMLDAGCSPNHVTDTTL 329
>gi|255661058|gb|ACU25698.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 429
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 49/79 (62%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I++Y+ I+ LGK G + A + + E +++ + N +++ L + G+ + + KLF+
Sbjct: 334 IATYNVIIQGLGKMGRADLANAVLEKLMKEGGYLDIVMYNTLINALGKAGRIDEANKLFE 393
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++K SG+ PD VTYNT+ +
Sbjct: 394 QMKASGINPDVVTYNTLIE 412
>gi|255661056|gb|ACU25697.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 429
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 49/79 (62%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I++Y+ I+ LGK G + A + + E +++ + N +++ L + G+ + + KLF+
Sbjct: 334 IATYNVIIQGLGKMGRADLANAVLEKLMKEGGYLDIVMYNTLINALGKAGRIDEANKLFE 393
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++K SG+ PD VTYNT+ +
Sbjct: 394 QMKASGINPDVVTYNTLIE 412
>gi|255661090|gb|ACU25714.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 308
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 49/79 (62%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I++Y+ I+ LGK G + A + + E +++ + N +++ L + G+ + + KLF+
Sbjct: 213 IATYNVIIQGLGKMGRADLANAVLEKLMKEGGYLDIVMYNTLINALGKAGRIDEANKLFE 272
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++K SG+ PD VTYNT+ +
Sbjct: 273 QMKASGINPDVVTYNTLIE 291
>gi|255661066|gb|ACU25702.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 429
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 49/79 (62%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I++Y+ I+ LGK G + A + + E +++ + N +++ L + G+ + + KLF+
Sbjct: 334 IATYNVIIQGLGKMGRADLANAVLEKLMKEGGYLDIVMYNTLINALGKAGRIDEANKLFE 393
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++K SG+ PD VTYNT+ +
Sbjct: 394 QMKASGINPDVVTYNTLIE 412
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTSISS-YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ +G ++ S Y ++ L KN +A+E++N + + K+N+ + ++ L + GK
Sbjct: 438 MKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGK 497
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E++ +LF+K+ Q GL PD VTYN +
Sbjct: 498 LETAWELFEKLSQEGLQPDVVTYNIM 523
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K +I +YS I L K G A E++ ++ E + +V N+++ + G+ +++
Sbjct: 479 KLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANI 538
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LF+K++++G TPD + YNT+
Sbjct: 539 LFEKMEENGCTPDIIAYNTL 558
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 39/85 (45%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
M+ H ISS++ + L K + + +YN + ++F +++ +CL +
Sbjct: 83 MRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRV 142
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+L I + G P+ VTY T+
Sbjct: 143 SEALAAMAGILRRGYIPNVVTYTTL 167
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ SYS+ I G ++ +++ + D+ + ++ ++++ L + GK + KL +
Sbjct: 272 VISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLE 331
Query: 69 KIKQSGLTPDAVTYNTV 85
+ Q G+ P+ +TYN++
Sbjct: 332 VMIQRGIVPNLITYNSL 348
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +YS I L K G +A E++ + + +V + ++ GK++ S
Sbjct: 234 KPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKH 293
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LFD++ G+ PD VT++ +
Sbjct: 294 LFDEMVDQGVQPDMVTFSVL 313
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M HG + SY+ IK L K GN +++ + + + K N F N++++ L + GK
Sbjct: 517 MVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGK 576
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+L+L ++ GLTPD VTYNT+
Sbjct: 577 VRDALELSKEMLNQGLTPDIVTYNTL 602
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G +I +YS+ + +NG A + + ++ + +N N I+ L ++GK
Sbjct: 377 MEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGK 436
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +++L ++K G PD TYNT+
Sbjct: 437 LDEAMRLVQEMKSQGCKPDICTYNTI 462
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY+ I L K G ALE+ + ++ ++ N +++ L + G ++L L +K+
Sbjct: 563 SYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKL 622
Query: 71 KQSGLTPDAVTYNTVYQSDHITW 93
+ PD VTYN + I+W
Sbjct: 623 PNENVHPDIVTYNIL-----ISW 640
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 39/77 (50%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I LGK+G +A+ + + + K ++ N I+ L N + + + +F +
Sbjct: 424 YNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLL 483
Query: 72 QSGLTPDAVTYNTVYQS 88
+ G+ + +TYNT+ +
Sbjct: 484 EEGVVANGITYNTLIHA 500
>gi|255661106|gb|ACU25722.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 310
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 48/79 (60%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I++Y+ I+ LGK G + A + + E +++ + N +++ L + G+ + + KLF
Sbjct: 215 IATYNVIIQGLGKMGRADLANAVLEKLIKEGGYLDIVMYNTLINALGKAGRIDEANKLFG 274
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++K SG+ PD VTYNT+ +
Sbjct: 275 QMKGSGINPDVVTYNTLIE 293
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G ++ +Y+ IK +GK G +A I+ ++ E K +V + N +++ L + G+
Sbjct: 291 MKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGR 350
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
++KLF++++ TP+ VTYNTV ++
Sbjct: 351 LADAIKLFEEMESLQCTPNVVTYNTVIKA 379
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKV-NVFICNLILSCLVRNGKFESSL 64
K + ++Y+S I L + G+ K E+YN + +E D + + + +++ + G+ +S++
Sbjct: 191 KPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAI 250
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
LFD++K++GL P A Y T+
Sbjct: 251 SLFDEMKENGLHPTAKIYTTI 271
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+++G T ++S++ + + G A+E++ + + K +V N +L CL R G
Sbjct: 537 MEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGM 596
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
FE + KL ++ G D +TY+++ ++
Sbjct: 597 FEEAAKLMKEMNSKGFEYDLITYSSILEA 625
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 45/81 (55%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
G +S Y+ IK LGK G +A++++N + +V+ N ++S +VR G + +
Sbjct: 472 GYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAH 531
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
L ++++G TPD ++N +
Sbjct: 532 SLLRTMEENGCTPDLNSHNII 552
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 38/76 (50%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y S I LGK A E++ + + + + +++ L + G+ ++ LF++
Sbjct: 442 AAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNE 501
Query: 70 IKQSGLTPDAVTYNTV 85
+K+ G PD YN +
Sbjct: 502 MKKLGCNPDVYAYNAL 517
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 45/79 (56%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y+ I K G+ KA + +N + + S K +V CN +++ L G+ E ++KLF+
Sbjct: 561 TTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFES 620
Query: 70 IKQSGLTPDAVTYNTVYQS 88
+ G D +TYNT+ Q+
Sbjct: 621 WVEKGKKVDVITYNTLIQA 639
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 1 MQQHGKTS--ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNG 58
M+Q G S + +Y++ + K S AL + + ++ K ++ N+I+ L R G
Sbjct: 340 MEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREG 399
Query: 59 KFESSLKLFDKIKQSGLTPDAVTYNTV 85
+ E +L + + + GLTPD +TYNT+
Sbjct: 400 QLEEALGRLEMMTEEGLTPDVITYNTL 426
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M + G T + +Y++ I K GN KA + + + K++ F N +L L + +
Sbjct: 411 MTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKR 470
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+E + +L Q G PD V+Y TV
Sbjct: 471 YEEAEELLRAPPQRGFVPDEVSYGTV 496
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 35/59 (59%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
KA++++ S ++ KV+V N ++ L ++ +++L+ F ++ GL PD TYN +
Sbjct: 613 KAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVL 671
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 28 ALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
+L+ ++S+ N + NL++ G +L K++ GL+PDAVTYNT+
Sbjct: 193 SLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLN 252
Query: 88 S 88
+
Sbjct: 253 A 253
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G K+S+ +++ +K L + G +AL +T+E +V N ++ + G
Sbjct: 376 MREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGN 435
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ L D++ +SGL D T NT+
Sbjct: 436 VAKAFVLMDEMVRSGLKMDTFTLNTL 461
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+Q+G +I +Y+ + L K +ALE+ + ++ ++N+ N I GK
Sbjct: 485 MEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGK 544
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
FE +LKL K+ G+ PDA+TYNT+
Sbjct: 545 FEEALKLLGKMLVGGVKPDAITYNTL 570
Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 24 NSLKALE-IYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTY 82
N + +E IY+++ + + NV+ N++L L +N + + + KL ++ G PD V+Y
Sbjct: 163 NRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSY 222
Query: 83 NTVYQS 88
TV S
Sbjct: 223 TTVISS 228
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+++G ++S+Y + I K G+ + A EI+N + NV + +++ L R+
Sbjct: 380 MERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSM 439
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNT 84
F + L +K+ P+ VT+NT
Sbjct: 440 FSQAWSLIEKMSTDNCPPNTVTFNT 464
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 44/78 (56%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +++S +K G L+AL I+N + +E + NV N ++ L +GK ++ +
Sbjct: 318 NVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVS 377
Query: 68 DKIKQSGLTPDAVTYNTV 85
K++++G +P+ TY +
Sbjct: 378 SKMERNGCSPNVSTYGAL 395
Score = 34.3 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 43/76 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+++++IK L +G A+ ++ + N+ N +L L++ + + +L+L ++
Sbjct: 461 TFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEM 520
Query: 71 KQSGLTPDAVTYNTVY 86
++ G+ + VTYNT++
Sbjct: 521 EEKGMELNLVTYNTIF 536
>gi|255661086|gb|ACU25712.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 309
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 49/79 (62%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I++Y+ I+ LGK G + A + + E +++ + N +++ L + G+ + + KLF+
Sbjct: 214 IATYNVIIQGLGKMGRADLANAVLEKLMKEGGYLDIVMYNTLINALGKAGRIDEANKLFE 273
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++K SG+ PD VTYNT+ +
Sbjct: 274 QMKASGINPDVVTYNTLIE 292
>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G ++ +Y+ IK +GK G +A I+ ++ E K +V + N +++ L + G+
Sbjct: 291 MKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGR 350
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
++KLF++++ TP+ VTYNTV ++
Sbjct: 351 LADAIKLFEEMESLQCTPNVVTYNTVIKA 379
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKV-NVFICNLILSCLVRNGKFESSL 64
K + ++Y+S I L + G+ K E+YN + +E D + + + +++ + G+ +S++
Sbjct: 191 KPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAI 250
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
LFD++K++GL P A Y T+
Sbjct: 251 SLFDEMKENGLHPTAKIYTTI 271
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+++G T ++S++ + + G A+E++ + + K +V N +L CL R G
Sbjct: 537 MEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGM 596
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
FE + KL ++ G D +TY+++ ++
Sbjct: 597 FEEAAKLMKEMNSKGFEYDLITYSSILEA 625
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 45/81 (55%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
G +S Y+ IK LGK G +A++++N + +V+ N ++S +VR G + +
Sbjct: 472 GYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAH 531
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
L ++++G TPD ++N +
Sbjct: 532 SLLRTMEENGCTPDLNSHNII 552
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 38/76 (50%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y S I LGK A E++ + + + + +++ L + G+ ++ LF++
Sbjct: 442 AAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNE 501
Query: 70 IKQSGLTPDAVTYNTV 85
+K+ G PD YN +
Sbjct: 502 MKKLGCNPDVYAYNAL 517
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 44/79 (55%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y+ I K G+ A +N + + S K +V CN +++ L +GK + +LKLF+
Sbjct: 560 TTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFES 619
Query: 70 IKQSGLTPDAVTYNTVYQS 88
+ G D +TYNT+ QS
Sbjct: 620 WVEKGKKVDVITYNTLIQS 638
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 45/80 (56%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + + ++ + L +G KAL+++ S ++ KV+V N ++ + + G +++L
Sbjct: 591 KPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALH 650
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
FD ++ GL PDA TYN V
Sbjct: 651 FFDDMEVKGLQPDAFTYNVV 670
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ + K S AL + + D+ K + N+++ L + GK E +L +
Sbjct: 349 VVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLE 408
Query: 69 KIKQSGLTPDAVTYNTV 85
KI + GL PD +TYNT+
Sbjct: 409 KIAEEGLAPDVITYNTL 425
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 39/77 (50%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ I K GN KA + + + + K++ F N +L L + ++E + +L
Sbjct: 419 VITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLH 478
Query: 69 KIKQSGLTPDAVTYNTV 85
Q G PD V+Y TV
Sbjct: 479 SPPQRGFVPDEVSYGTV 495
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 41/78 (52%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
SIS+Y++ IK L + +A++ N ++ + N+I+ + G E++ +
Sbjct: 523 SISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFH 582
Query: 68 DKIKQSGLTPDAVTYNTV 85
+K+ ++ PD VT NT+
Sbjct: 583 NKMVENSFKPDVVTCNTL 600
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 6 KTSISSYSSYIKFLGKNGNSL--KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESS 63
+ S+ + ++ + L ++ ++L +L+++ S+ + N + NL++ G +
Sbjct: 168 RPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADA 227
Query: 64 LKLFDKIKQSGLTPDAVTYNTVYQS 88
L ++ GL+PDAVTYNT+ +
Sbjct: 228 LATLSTMQGFGLSPDAVTYNTLLNA 252
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 44/79 (55%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y+ I K G+ A +N + + S K +V CN +++ L +GK + +LKLF+
Sbjct: 560 TTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFES 619
Query: 70 IKQSGLTPDAVTYNTVYQS 88
+ G D +TYNT+ QS
Sbjct: 620 WVEKGKKVDVITYNTLIQS 638
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 45/80 (56%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + + ++ + L +G KAL+++ S ++ KV+V N ++ + + G +++L
Sbjct: 591 KPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALH 650
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
FD ++ GL PDA TYN V
Sbjct: 651 FFDDMEVKGLQPDAFTYNVV 670
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ + K S AL + + D+ K + N+++ L + GK E +L +
Sbjct: 349 VVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLE 408
Query: 69 KIKQSGLTPDAVTYNTV 85
KI + GL PD +TYNT+
Sbjct: 409 KIAEEGLAPDVITYNTL 425
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 39/77 (50%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ I K GN KA + + + + K++ F N +L L + ++E + +L
Sbjct: 419 VITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLH 478
Query: 69 KIKQSGLTPDAVTYNTV 85
Q G PD V+Y TV
Sbjct: 479 SPPQRGFVPDEVSYGTV 495
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 42/78 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
SIS+Y++ IK L + +A++ N + ++ + N+I+ + G E++ +
Sbjct: 523 SISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFH 582
Query: 68 DKIKQSGLTPDAVTYNTV 85
+K+ ++ PD VT NT+
Sbjct: 583 NKMVENSFKPDVVTCNTL 600
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 6 KTSISSYSSYIKFLGKNGNSL--KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESS 63
+ S+ + ++ + L ++ ++L +L+++ S+ + N + NL++ G +
Sbjct: 168 RPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADA 227
Query: 64 LKLFDKIKQSGLTPDAVTYNTVYQS 88
L ++ GL+PDAVTYNT+ +
Sbjct: 228 LATLSTMQGFGLSPDAVTYNTLLNA 252
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y++ + + G+ KA + +N + + S K +VF CN++L L G E +LKLF+
Sbjct: 559 TTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNT 618
Query: 70 IKQSGLTPDAVTYNTVYQS 88
G D VTYNT+ S
Sbjct: 619 WVSKGKAIDTVTYNTLITS 637
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY + I K+GN +AL++++ + ++ + N I+ L + GK E ++ +++
Sbjct: 490 SYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNEL 549
Query: 71 KQSGLTPDAVTYNTV 85
+SGL PD TYNT+
Sbjct: 550 LESGLLPDETTYNTI 564
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 34/59 (57%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
+A ++ ++++ K N N+++ + GK + + K+++SG +PD VTYNT+
Sbjct: 366 EAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTL 424
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 28/43 (65%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
+V+ N++++ L G+ E + KL D+++ L PD V+YNT+
Sbjct: 312 DVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTL 354
>gi|297600539|ref|NP_001049380.2| Os03g0215900 [Oryza sativa Japonica Group]
gi|108706847|gb|ABF94642.1| RSP67.2, putative, expressed [Oryza sativa Japonica Group]
gi|255674311|dbj|BAF11294.2| Os03g0215900 [Oryza sativa Japonica Group]
Length = 676
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 45/75 (60%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS+ I G+ G++ AL +Y+ E +++ IC ++ +G F+ +L +F+++
Sbjct: 221 TYSAVIDAYGRAGDAETALRLYDRARAEKWQLDPVICATVIRVHSSSGNFDGALNVFEEM 280
Query: 71 KQSGLTPDAVTYNTV 85
K +G+ P+ V YNTV
Sbjct: 281 KAAGVKPNLVVYNTV 295
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 36/78 (46%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
M K SYSS + GN A I N + + K N+FI ++ C + G+
Sbjct: 389 MDSRSKPDSWSYSSMVTLYSCTGNVAGAEGILNEMVEAGFKPNIFILTSLIRCYGKAGRT 448
Query: 61 ESSLKLFDKIKQSGLTPD 78
+ ++ F ++ G+TPD
Sbjct: 449 DDVVRSFAMLEDLGITPD 466
>gi|449445824|ref|XP_004140672.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Cucumis sativus]
gi|449487417|ref|XP_004157616.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Cucumis sativus]
Length = 486
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 49/81 (60%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
G+ S+ Y+ I K+G KAL Y+ + + K +V+ N+++S RN +F +L
Sbjct: 180 GRPSVVVYNILINGFVKSGRFDKALGFYSRMLSDRVKPDVYTFNILISGYCRNSQFVQAL 239
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
+LF ++++ G +P+ +++NT+
Sbjct: 240 ELFKEMREKGCSPNVISFNTL 260
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 42/76 (55%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y ++ L GN+ KA+E+ + + E + + ++ L + G+ ++ + +++
Sbjct: 327 YYGVVEMLCGKGNAGKAMEVVDELWMEGNVPSFITSTTLIDGLRKEGRVNDAMNVTERML 386
Query: 72 QSGLTPDAVTYNTVYQ 87
+ G+ PD+VT+N++ Q
Sbjct: 387 EVGMIPDSVTFNSLLQ 402
>gi|255661094|gb|ACU25716.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 311
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 49/79 (62%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I++Y+ I+ LGK G + A + + E +++ + N +++ L + G+ + + KLF+
Sbjct: 216 IATYNVIIQGLGKMGRADLANAVLEKLMKEGGYLDIVMYNTLINALGKAGRIDEANKLFE 275
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++K SG+ PD VTYNT+ +
Sbjct: 276 QMKASGINPDVVTYNTLIE 294
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 45/79 (56%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y+ I K G+ KA + +N + + K +V CN +++ L +GK E ++KLF+
Sbjct: 562 TTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFES 621
Query: 70 IKQSGLTPDAVTYNTVYQS 88
+ G D +TYNT+ Q+
Sbjct: 622 WAEKGKKVDVITYNTLIQA 640
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 48/85 (56%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
++ + K + + ++ + L +G KA++++ S ++ KV+V N ++ L ++G
Sbjct: 588 LENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDV 647
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+++L F ++ GL PDA TYN V
Sbjct: 648 DTALHFFADMEARGLQPDAFTYNVV 672
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 40/77 (51%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ + K S AL + + D+ K ++ N+++ L R G+ E +L
Sbjct: 351 VVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLK 410
Query: 69 KIKQSGLTPDAVTYNTV 85
+ + GL PD +TYNT+
Sbjct: 411 MMTEEGLAPDVITYNTL 427
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ I K N KA + + + K++ F N +L L + ++E + +L
Sbjct: 421 VITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLR 480
Query: 69 KIKQSGLTPDAVTYNTV 85
Q G PD V+Y TV
Sbjct: 481 SPPQRGFVPDEVSYGTV 497
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 41/83 (49%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y++ I+ L K+G+ AL + + + + F N++LS L G+ E +
Sbjct: 628 KVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQN 687
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
+ K+ +SG + +Y + S
Sbjct: 688 MLHKLDESGKLSERFSYPLIKSS 710
>gi|297827231|ref|XP_002881498.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327337|gb|EFH57757.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 756
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I SY++ K + + G + A +N + E + NL+L + + E++L+ F
Sbjct: 218 TIKSYNTLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFF 277
Query: 68 DKIKQSGLTPDAVTYNTV 85
D +K G++PDAVTYNT+
Sbjct: 278 DDMKTRGISPDAVTYNTI 295
>gi|255661096|gb|ACU25717.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 308
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 49/79 (62%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I++Y+ I+ LGK G + A + + E +++ + N +++ L + G+ + + KLF+
Sbjct: 213 IATYNVIIQGLGKMGRADLANVVLEKLMKEGGYLDIVMYNTLINALGKAGRIDEANKLFE 272
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++K SG+ PD VTYNT+ +
Sbjct: 273 QMKASGINPDVVTYNTLIE 291
>gi|212275714|ref|NP_001130387.1| uncharacterized protein LOC100191483 [Zea mays]
gi|194689000|gb|ACF78584.1| unknown [Zea mays]
gi|414865541|tpg|DAA44098.1| TPA: hypothetical protein ZEAMMB73_448674 [Zea mays]
Length = 691
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 44/75 (58%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS+ I G GNS AL +Y+ E +++ IC+ ++ +G F+ +L +F+++
Sbjct: 236 TYSAVIDAYGHAGNSEAALRLYDRARAEKWQLDPVICSTVIKVHSTSGNFDGALNVFEEM 295
Query: 71 KQSGLTPDAVTYNTV 85
K G+ P+ V YNT+
Sbjct: 296 KAIGVRPNLVVYNTM 310
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 36/78 (46%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
M H K SYSS + N L A I N + + K N+F+ ++ C + G+
Sbjct: 404 MGAHSKPDSWSYSSMVTLYSSTANVLSAEGILNEMVEAGFKPNIFVLTSLIRCYGKVGRT 463
Query: 61 ESSLKLFDKIKQSGLTPD 78
+ ++ F ++ G+ PD
Sbjct: 464 DDVVRSFGMLQDLGIIPD 481
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ IK L K G K L ++ + + + CN+++S L R GK +LK +
Sbjct: 554 TYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDM 613
Query: 71 KQSGLTPDAVTYNTV 85
GLTPD VTYN++
Sbjct: 614 IHRGLTPDIVTYNSL 628
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 45/77 (58%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I L K+GN +AL+++ ++ + K +++ N +++ L +N K E +L L+ +
Sbjct: 450 YNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMF 509
Query: 72 QSGLTPDAVTYNTVYQS 88
G+ + VTYNT+ +
Sbjct: 510 LEGVIANTVTYNTLVHA 526
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 42/78 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+ I K G +A EI NS++ + +N N ++ L ++G E +L+LF
Sbjct: 411 NVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLF 470
Query: 68 DKIKQSGLTPDAVTYNTV 85
++ G PD T+N++
Sbjct: 471 GEMSGKGCKPDIYTFNSL 488
Score = 34.7 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y+S I L K G+ +A ++N + E + + N ++S G F + L
Sbjct: 622 IVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLY 681
Query: 69 KIKQSGLTPDAVTYNTV--YQSDHITW 93
K SG P+ VT++ + Y I W
Sbjct: 682 KGVDSGFIPNEVTWSILINYIVKKIPW 708
>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
Length = 1153
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 42/68 (61%)
Query: 15 YIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSG 74
+I + GK+G SLKA++ Y + + +V N +LS L R+G+ + ++F ++K G
Sbjct: 429 FINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMG 488
Query: 75 LTPDAVTY 82
++PD +TY
Sbjct: 489 VSPDTITY 496
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 14 SYIKFL---GKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YI L G +G+S +EI+N++ + N+ ++ L + G+ + +L +FD++
Sbjct: 320 TYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEM 379
Query: 71 KQSGLTPDAVTYNTV 85
K+ G++P+ +YN++
Sbjct: 380 KEKGISPEQYSYNSL 394
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + LG+ G + + + +T N+ N +L CL +NG+ ++ + +
Sbjct: 565 TYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSM 624
Query: 71 KQSGLTPDAVTYNTV 85
+ G TPD +YNTV
Sbjct: 625 TEKGCTPDLSSYNTV 639
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G K ++ SY+ I+ LG+ +A +I + D K +V +++ L G+
Sbjct: 239 MEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGR 298
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +F K+K S PD VTY T+
Sbjct: 299 LSDAKDVFWKMKASDQKPDRVTYITL 324
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 39/80 (48%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +YS + GK + L + N + K NV+ + + L + +F+ + ++
Sbjct: 212 SVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQIL 271
Query: 68 DKIKQSGLTPDAVTYNTVYQ 87
K++ SG PD VT+ V Q
Sbjct: 272 GKMEDSGCKPDVVTHTVVIQ 291
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 45/85 (52%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
++Q I SY+ I L G L + + + + ++ I NL++ L ++ +
Sbjct: 940 VEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERI 999
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
E ++ LF+++K+ G+ P+ TYN++
Sbjct: 1000 EEAVCLFNEMKKKGIVPNLYTYNSL 1024
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ IK K + +A+ ++ + + +V N ++ L + GK + KLF ++
Sbjct: 495 TYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQL 554
Query: 71 KQSGLTPDAVTYNTV 85
K+ + P TYNT+
Sbjct: 555 KEMKIEPTNGTYNTL 569
Score = 34.7 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 40/77 (51%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ + +S I L K G +A ++++ + + + N +LS L R GK + + L +
Sbjct: 528 VLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLE 587
Query: 69 KIKQSGLTPDAVTYNTV 85
++ S P+ +TYNTV
Sbjct: 588 EMTHSIHPPNLITYNTV 604
Score = 34.3 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y + L K G + A ++N + + K N I N++L+ G E+ ++F+K+
Sbjct: 880 TYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKM 939
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ PD +Y +
Sbjct: 940 VEQGINPDIKSYTVL 954
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 43/78 (55%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SYS+ I LGK GN+ +ALE+ N + + N I + I S L G+ +++F+ I
Sbjct: 499 SYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENI 558
Query: 71 KQSGLTPDAVTYNTVYQS 88
+ + + DAV YN V S
Sbjct: 559 QDTTVRSDAVLYNAVISS 576
>gi|255661098|gb|ACU25718.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
Length = 431
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 49/79 (62%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I++Y+ I+ LGK G + A + + E +++ + N +++ L + G+ + + KLF+
Sbjct: 336 IATYNVIIQGLGKMGRADLANVVLEKLMKEGGYLDIVMYNTLINALGKAGRIDEANKLFE 395
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++K SG+ PD VTYNT+ +
Sbjct: 396 QMKASGINPDVVTYNTLIE 414
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 45/83 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SYS+ I LGK G + +ALE+ N + ++ N I + + S L R G+ + +++FD I
Sbjct: 470 SYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSI 529
Query: 71 KQSGLTPDAVTYNTVYQSDHITW 93
+ + + DA YN V S W
Sbjct: 530 QDATVRSDAALYNAVISSLCKRW 552
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 24 NSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYN 83
++++AL++ ++ D N CNL++S + G + ++L K+ G PD V+YN
Sbjct: 161 SAVRALQVLHAKGCTLDSGN---CNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYN 217
Query: 84 TVYQ 87
V +
Sbjct: 218 AVLK 221
Score = 34.7 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
++++ I F+ K G + +A+E+ + ++ + ++ L + GK E +L+L + +
Sbjct: 435 TFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 494
Query: 71 KQSGLTPDAVTYNTV 85
G+TP+ + Y+++
Sbjct: 495 INKGITPNTIIYSSM 509
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 45/83 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SYS+ I LGK G + +ALE+ N + ++ N I + + S L R G+ + +++FD I
Sbjct: 495 SYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSI 554
Query: 71 KQSGLTPDAVTYNTVYQSDHITW 93
+ + + DA YN V S W
Sbjct: 555 QDATVRSDAALYNAVISSLCKRW 577
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 24 NSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYN 83
++++AL++ ++ D N CNL++S + G + ++L K+ G PD V+YN
Sbjct: 161 SAVRALQVLHAKGCTLDSGN---CNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYN 217
Query: 84 TVYQ 87
V +
Sbjct: 218 AVLK 221
>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 45/77 (58%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I LG+ G K EI++ + +VF +++ RNG+++SSL+L D++K
Sbjct: 149 YTIMIGVLGREGLLEKCQEIFDEMPSHGVAPSVFSFTALINAYGRNGQYKSSLELLDRMK 208
Query: 72 QSGLTPDAVTYNTVYQS 88
+ ++P +TYNTV S
Sbjct: 209 KERVSPSILTYNTVINS 225
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNG- 58
M HG S+ S+++ I G+NG +LE+ + + E ++ N +++ R G
Sbjct: 172 MPSHGVAPSVFSFTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVINSCARGGL 231
Query: 59 KFESSLKLFDKIKQSGLTPDAVTYNTV 85
+E L LF +++ G+ D VTYNT+
Sbjct: 232 DWEELLGLFAQMRHEGIQADIVTYNTL 258
Score = 34.3 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I+SY+ ++ ++G+ +A+ ++ + N +++L+ R+G+++ LF
Sbjct: 322 ITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFL 381
Query: 69 KIKQSGLTPDAVTYNTV 85
++K S P+A TYN +
Sbjct: 382 EMKVSNTEPNAATYNIL 398
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
SI +Y+S I ++G +A+E+ N + ++ K +VF +LS R GK ES++ +F
Sbjct: 348 SIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIF 407
Query: 68 DKIKQSGLTPDAVTYN 83
++++ +G P+ T+N
Sbjct: 408 EEMRNAGCKPNICTFN 423
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G T S+++Y+S + ++ + K+ EI I + K ++ N ++ RN +
Sbjct: 655 MKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTR 714
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNT 84
+ ++F +++ SG+ PD +TYNT
Sbjct: 715 MRDASRIFSEMRDSGIVPDVITYNT 739
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M + G K + +Y++ + + G A+ I+ + + K N+ N + GK
Sbjct: 375 MAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGK 434
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
F +K+FD+I GL+PD VT+NT+
Sbjct: 435 FVDMMKIFDEINVCGLSPDIVTWNTL 460
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 38/70 (54%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGL 75
I LGK G A ++N + ++ ++V+ ++S +G++ ++ +F K+++ G
Sbjct: 180 ISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGC 239
Query: 76 TPDAVTYNTV 85
P +TYN +
Sbjct: 240 KPTLITYNVI 249
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
+Q+ G + SY+S I +G +A+ ++ + +E K + N+IL+ + G
Sbjct: 199 LQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGT 258
Query: 60 -FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ L +K+K G+ PDA TYNT+
Sbjct: 259 PWNKITSLVEKMKSDGIAPDAYTYNTL 285
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 43/80 (53%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K +I +++++IK G G + ++I++ I ++ N +L+ +NG
Sbjct: 416 KPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSG 475
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F ++K++G P+ T+NT+
Sbjct: 476 VFKEMKRAGFVPERETFNTL 495
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 39/77 (50%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I ++++ + G+NG + ++ + N ++S R G FE ++ ++
Sbjct: 454 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYR 513
Query: 69 KIKQSGLTPDAVTYNTV 85
++ +G+TPD TYNTV
Sbjct: 514 RMLDAGVTPDLSTYNTV 530
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + GK+ +A+++ N + ++ N ++S R+G + +++L +++
Sbjct: 316 TYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM 375
Query: 71 KQSGLTPDAVTYNTV 85
+ G PD TY T+
Sbjct: 376 AEKGTKPDVFTYTTL 390
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 17/101 (16%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKV-------NVFICNLILS 52
M++ G K ++ +Y+ + GK G +N IT +K+ + + N +++
Sbjct: 234 MEEEGCKPTLITYNVILNVFGKMGTP------WNKITSLVEKMKSDGIAPDAYTYNTLIT 287
Query: 53 CLVRNGKFESSLKLFDKIKQSGLTPDAVTYNT---VYQSDH 90
C R + + ++F+++K +G + D VTYN VY H
Sbjct: 288 CCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSH 328
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y++ + + G+ KA + +N + + S K +VF CN++L L G E +LKLF+
Sbjct: 559 TTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNT 618
Query: 70 IKQSGLTPDAVTYNTVYQS 88
G D VTYNT+ S
Sbjct: 619 WVSKGKAIDTVTYNTLITS 637
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY + I K+GN +AL++++ + ++ + N I+ L + GK E ++ +++
Sbjct: 490 SYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNEL 549
Query: 71 KQSGLTPDAVTYNTV 85
+SGL PD TYNT+
Sbjct: 550 LESGLLPDETTYNTI 564
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 34/59 (57%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
+A ++ ++++ K N N+++ + GK + + K+++SG +PD VTYNT+
Sbjct: 366 EAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTL 424
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 28/43 (65%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
+V+ N++++ L G+ E + KL D+++ L PD V+YNT+
Sbjct: 312 DVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTL 354
>gi|255548135|ref|XP_002515124.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545604|gb|EEF47108.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 898
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 50/81 (61%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
+ I++Y+ I+ LGK G + A + + + + +++ + N +++ L + G+ + KL
Sbjct: 685 SDIATYNLIIQGLGKMGRADLASSVLDKLMKQGGYLDIVMYNTLINALGKAGRIDEVRKL 744
Query: 67 FDKIKQSGLTPDAVTYNTVYQ 87
F+++K SG+ PD VTYNT+ +
Sbjct: 745 FEQMKTSGINPDVVTYNTLIE 765
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 39/77 (50%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+S I+ L +G AL +Y + + + F +I+ ++ + + K+F
Sbjct: 300 LCTYNSLIRLLCFSGKVKDALVVYEELKISGHEPDAFTYRIIIEGCSKSYRMNDATKIFS 359
Query: 69 KIKQSGLTPDAVTYNTV 85
+++ +G PD YN++
Sbjct: 360 EMQYNGFVPDTTVYNSL 376
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M Q G + S +Y+ I L KNG S ++ + + V+ ++I+ L R G+
Sbjct: 396 MVQDGVRASSWTYNILIDGLCKNGRSAAGYSLFCDLKKKGKFVDAITYSIIVLLLCREGQ 455
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQSDH 90
+ +L L +++++ G D VT ++ + H
Sbjct: 456 LKEALSLVEEMEERGFVVDLVTITSLLIAFH 486
>gi|255661070|gb|ACU25704.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 309
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 50/79 (63%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I++Y+ I+ LG+ G + A + + +E +++ + N +++ L + G+ + + KLF+
Sbjct: 214 IATYNVIIQGLGEMGRADLANAVLEKLMNEGGYLDIVMYNTLINALGKAGRIDEANKLFE 273
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++K SG+ PD VTYNT+ +
Sbjct: 274 QMKASGINPDVVTYNTLIE 292
>gi|255661076|gb|ACU25707.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 429
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 50/79 (63%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I++Y+ I+ LG+ G + A + + +E +++ + N +++ L + G+ + + KLF+
Sbjct: 334 IATYNVIIQGLGEMGRADLANAVLEKLMNEGGYLDIVMYNTLINALGKAGRIDEANKLFE 393
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++K SG+ PD VTYNT+ +
Sbjct: 394 QMKASGINPDVVTYNTLIE 412
>gi|357502513|ref|XP_003621545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241489|gb|ABD33347.1| Pentatricopeptide repeat [Medicago truncatula]
gi|355496560|gb|AES77763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 791
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 49/81 (60%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
T I++Y+ I+ LGK G + A + + + + +++ + N +++ L + G+ + K
Sbjct: 653 TDIATYNMIIQGLGKMGRADLASAVLDGLLKQGGYLDIVMYNTLINALGKAGRIDEVNKF 712
Query: 67 FDKIKQSGLTPDAVTYNTVYQ 87
F+++K SG+ PD VTYNT+ +
Sbjct: 713 FEQMKSSGINPDVVTYNTLIE 733
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 28 ALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
AL I+N + D + V + N +L L + K ++F+K+ Q G+ TYN +
Sbjct: 329 ALRIFNEMKDNGFRPGVLVYNCVLDGLFKAAKVNEGCQMFEKMAQEGVKASCSTYNIL 386
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFIC--NLILSCLVRNGKFESSLKLFDK 69
Y+ I G G+ + +++++N + ++ + +C N +LS L + GK +L ++D+
Sbjct: 241 YNICIHAFGSWGDLVTSMKLFNEMKEDKNLFGPDMCTYNSVLSVLCKVGKINDALIVWDE 300
Query: 70 IKQSGLTPDAVTYNTVYQ 87
+K G PD TY + +
Sbjct: 301 LKGCGYEPDEFTYTILVR 318
>gi|255661112|gb|ACU25725.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 424
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I++Y+ I+ LGK G + A + + E +++ + N +++ L + G+ + KLF
Sbjct: 329 IATYNVIIQGLGKMGRADLANAVLEKLMKEGGYLDIVMYNTLINALGKAGRIDEVNKLFQ 388
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++K SG+ PD VTYNT+ +
Sbjct: 389 QMKASGINPDVVTYNTLIE 407
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
SI +Y+S I ++G +A+E+ N + ++ K +VF +LS R GK ES++ +F
Sbjct: 348 SIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIF 407
Query: 68 DKIKQSGLTPDAVTYN 83
++++ +G P+ T+N
Sbjct: 408 EEMRNAGCKPNICTFN 423
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M + G K + +Y++ + + G A+ I+ + + K N+ N + GK
Sbjct: 375 MAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGK 434
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
F +K+FD+I GL+PD VT+NT+
Sbjct: 435 FTEMMKIFDEINVCGLSPDIVTWNTL 460
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G T S+++Y+S + ++ + K+ EI I + K ++ N ++ RN +
Sbjct: 655 MKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTR 714
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNT 84
+ ++F +++ SG+ PD +TYNT
Sbjct: 715 MRDASRIFSEMRNSGIVPDVITYNT 739
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 38/70 (54%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGL 75
I LGK G A ++N + ++ ++V+ ++S +G++ ++ +F K+++ G
Sbjct: 180 ISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGC 239
Query: 76 TPDAVTYNTV 85
P +TYN +
Sbjct: 240 KPTLITYNVI 249
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
+Q+ G + SY+S I +G +A+ ++ + ++ K + N+IL+ + G
Sbjct: 199 LQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGT 258
Query: 60 -FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ L +K+K G+ PDA TYNT+
Sbjct: 259 PWNKITSLVEKMKSDGIAPDAYTYNTL 285
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 43/80 (53%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K +I +++++IK G G + ++I++ I ++ N +L+ +NG
Sbjct: 416 KPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSG 475
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F ++K++G P+ T+NT+
Sbjct: 476 VFKEMKRAGFVPERETFNTL 495
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 39/77 (50%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I ++++ + G+NG + ++ + N ++S R G FE ++ ++
Sbjct: 454 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYR 513
Query: 69 KIKQSGLTPDAVTYNTV 85
++ +G+TPD TYNTV
Sbjct: 514 RMLDAGVTPDLSTYNTV 530
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + GK+ +A+++ N + ++ N ++S R+G + +++L +++
Sbjct: 316 TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM 375
Query: 71 KQSGLTPDAVTYNTV 85
+ G PD TY T+
Sbjct: 376 AEKGTKPDVFTYTTL 390
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 17/101 (16%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKV-------NVFICNLILS 52
M++ G K ++ +Y+ + GK G +N IT +K+ + + N +++
Sbjct: 234 MEEDGCKPTLITYNVILNVFGKMGTP------WNKITSLVEKMKSDGIAPDAYTYNTLIT 287
Query: 53 CLVRNGKFESSLKLFDKIKQSGLTPDAVTYNT---VYQSDH 90
C R + + ++F+++K +G + D VTYN VY H
Sbjct: 288 CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSH 328
>gi|302829725|ref|XP_002946429.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
gi|300268175|gb|EFJ52356.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
Length = 961
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 46/80 (57%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K S ++Y++ I GK G KALEI+ + + NV + ++S + G++E +L+
Sbjct: 413 KPSATTYTALISAYGKKGQVEKALEIFRDMIRRGCERNVITYSSLISACEKAGRWEMALE 472
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LF K+ + P+ VT+N++
Sbjct: 473 LFSKMHKENCKPNVVTFNSL 492
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 43/75 (57%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +YSS I K G ALE+++ + E+ K NV N +++ G +E + +LF
Sbjct: 450 NVITYSSLISACEKAGRWEMALELFSKMHKENCKPNVVTFNSLIAACSHGGHWEKASELF 509
Query: 68 DKIKQSGLTPDAVTY 82
++++ G PD++TY
Sbjct: 510 EQMQTQGCKPDSITY 524
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVN-VFICNLILSCLVRNGKF 60
+++ K ++ +++S I G+ KA E++ + + K + + C LI + R G++
Sbjct: 479 KENCKPNVVTFNSLIAACSHGGHWEKASELFEQMQTQGCKPDSITYCGLI-TAYERGGQW 537
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
+LK F++++ G PDA +N++ +
Sbjct: 538 RRALKAFEQMQTQGCHPDAAVFNSLME 564
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 41/78 (52%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +YS+ + K A ++Y + +E N+ N+++ V+ ++E ++K+
Sbjct: 310 NVHTYSALMNVCIKANELDLAQDVYKQMLEEGCSPNLVTYNILIDVYVKRCQWEEAVKVL 369
Query: 68 DKIKQSGLTPDAVTYNTV 85
D +++ + + TYNTV
Sbjct: 370 DTLEKQAIQAEVRTYNTV 387
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 37/59 (62%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
+A+++ +++ ++ + V N ++S ++G+ E +LK+++K+ +G+ P A TY +
Sbjct: 364 EAVKVLDTLEKQAIQAEVRTYNTVISACNKSGQPEQALKVYEKMLAAGVKPSATTYTAL 422
Score = 34.7 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 43/84 (51%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
+Q + + +Y++ I K+G +AL++Y + K + ++S + G+ E
Sbjct: 374 KQAIQAEVRTYNTVISACNKSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVE 433
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
+L++F + + G + +TY+++
Sbjct: 434 KALEIFRDMIRRGCERNVITYSSL 457
>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y++ I + G KA + N + ++S K ++F CN++L L R G +LKLF+
Sbjct: 477 TTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNT 536
Query: 70 IKQSGLTPDAVTYNTV 85
G DAVTYNT+
Sbjct: 537 WISKGKAIDAVTYNTI 552
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I + G KA + N + ++S K ++F CN++L L G +++LKLF+
Sbjct: 266 TYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTW 325
Query: 71 KQSGLTPDAVTYNTV 85
G DAVTYNT+
Sbjct: 326 ISKGKAIDAVTYNTI 340
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 23 GNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTY 82
G KA + N + ++S K ++F CN++L L G +++LKLF+ G DAVTY
Sbjct: 384 GQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTY 443
Query: 83 NTV 85
NT+
Sbjct: 444 NTI 446
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 40/70 (57%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGL 75
++ L + G +KAL+++N+ + ++ N I+S L + G+FE + L ++K+ L
Sbjct: 518 LRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKL 577
Query: 76 TPDAVTYNTV 85
PD TYN +
Sbjct: 578 GPDCYTYNAI 587
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 28 ALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ-SGLTPDAVTYNTV 85
AL+++N+ + ++ N I+S L + G+FE + L ++++ +GL PD TYNT+
Sbjct: 424 ALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTI 482
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 28 ALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
AL+++N+ + ++ N I+S L + G+FE + L ++++ L PD TYN +
Sbjct: 318 ALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAI 375
>gi|15232517|ref|NP_188138.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273407|sp|Q9LIL5.1|PP233_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15200
gi|11994509|dbj|BAB02574.1| unnamed protein product [Arabidopsis thaliana]
gi|332642110|gb|AEE75631.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 45/82 (54%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + SY + I L K G KA+E+Y ++ D +V ICN ++ L + +L+
Sbjct: 279 RPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALE 338
Query: 66 LFDKIKQSGLTPDAVTYNTVYQ 87
+F +I + G P+ VTYN++ +
Sbjct: 339 VFREISEKGPDPNVVTYNSLLK 360
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 43/75 (57%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS+ I K G +A+E++ K +V + + ++ L +NG ESS+ L D++
Sbjct: 473 TYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEM 532
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ P+ VTYN++
Sbjct: 533 TKEGIRPNVVTYNSI 547
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
S+ I LG+ G A ++++ E V+ + ++S R+G ++K+FD +K
Sbjct: 194 SAMISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKS 253
Query: 73 SGLTPDAVTYNTV 85
+GL P+ VTYN V
Sbjct: 254 NGLMPNLVTYNAV 266
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +YS+ I K G AL ++N + ++ N +LS + G+FE +L +
Sbjct: 365 NVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVC 424
Query: 68 DKIKQSGLTPDAVTYNTV 85
+++ +G+ D VTYN +
Sbjct: 425 KEMENAGIRKDVVTYNAL 442
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 8 SISSYSSYIKFLGKNGNSLK-ALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
++ +Y++ I GK G K +EI++ + + + N +L+ R G +E++ +L
Sbjct: 259 NLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRL 318
Query: 67 FDKIKQSGLTPDAVTYNTV 85
F + G+ D TYNT+
Sbjct: 319 FSAMVDKGIDQDIFTYNTL 337
>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 51/81 (62%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+ I+ LGK+G A +Y ++ + K +V + N +++ L R+ + + +++LF
Sbjct: 300 TVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELF 359
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
++++ TP+ VTYNT+ +S
Sbjct: 360 EEMRLLNCTPNVVTYNTIIKS 380
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+++G I+S++ + L + G +A+E++ + + K + N +L CL R G
Sbjct: 538 MEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGL 597
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
FE + KL ++ G D +TY+++ ++
Sbjct: 598 FEEATKLMKEMNSKGFEYDLITYSSILEA 626
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 45/77 (58%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ I + + +A ++ ++ + ++ N+IL+ L R G + ++++F
Sbjct: 512 VYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFA 571
Query: 69 KIKQSGLTPDAVTYNTV 85
K+K S + PDAV+YNTV
Sbjct: 572 KMKSSTIKPDAVSYNTV 588
Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 43/81 (53%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
G +S+ Y+ IK GK G +A+ ++N + +V+ N +++ +VR + +
Sbjct: 473 GSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAF 532
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
LF ++++G PD ++N +
Sbjct: 533 SLFRTMEENGCNPDINSHNII 553
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKV-NVFICNLILSCLVRNGKFESSL 64
+ + +Y+S I L + G+ K E+YN + E + + ++S + + +S++
Sbjct: 192 RPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSAV 251
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
+LFD++K++GL P A Y T+
Sbjct: 252 RLFDEMKENGLQPTAKIYTTL 272
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 39/76 (51%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y S I LGK A E++ + + +V + +++ + G+F ++ LF++
Sbjct: 443 AAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNE 502
Query: 70 IKQSGLTPDAVTYNTV 85
+K+ G PD YN +
Sbjct: 503 MKKLGCIPDVYAYNAL 518
>gi|356547408|ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Glycine max]
Length = 631
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+++G T I+S++ + L + G ALE++ + + + K +V N IL CL R G
Sbjct: 531 MEENGCTPDINSHNIILNGLARTGGPKGALEMFTKMKNSTIKPDVVSFNTILGCLSRAGL 590
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
FE + KL ++ G D +TY+++ ++
Sbjct: 591 FEEAAKLMQEMSSKGFQYDLITYSSILEA 619
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 47/81 (58%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+ I+ LGK+G A Y ++ + K +V + N +++ L R+ ++KLF
Sbjct: 293 TVFTYTELIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINILGRSNHLRDAIKLF 352
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
D++K P+ VTYNT+ +S
Sbjct: 353 DEMKLLNCAPNVVTYNTIIKS 373
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 44/81 (54%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
G +S Y+ IK GK G +A+ ++N + +V+ N +++ +VR + + +
Sbjct: 466 GCSSARVYAVMIKHFGKCGRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVRAERMDEAF 525
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
LF ++++G TPD ++N +
Sbjct: 526 SLFRTMEENGCTPDINSHNII 546
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDE----SDKVNVFICNLILSCLVRNGKFE 61
+ + S+Y+S I L + G+ K E+YN + E D V + ++S + + +
Sbjct: 185 RPTASTYNSIILMLMQEGHHEKVHELYNEMCSEVHCFPDTVTY---SALISAFAKLNRDD 241
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
S+++LFD++K++GL P A Y T+
Sbjct: 242 SAIRLFDEMKENGLQPTAKIYTTL 265
Score = 39.3 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 36/59 (61%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
+A ++ ++ + ++ N+IL+ L R G + +L++F K+K S + PD V++NT+
Sbjct: 523 EAFSLFRTMEENGCTPDINSHNIILNGLARTGGPKGALEMFTKMKNSTIKPDVVSFNTI 581
>gi|297834384|ref|XP_002885074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330914|gb|EFH61333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 517
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 46/82 (56%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + SY + I L K G KA+E+Y ++ + +V ICN ++ L + +L+
Sbjct: 273 KPDVVSYGTMINALTKKGKLGKAMELYRALWETGRNPDVKICNNVIDALCFKKRIPEALE 332
Query: 66 LFDKIKQSGLTPDAVTYNTVYQ 87
+F ++ + G +P+ VTYN++ +
Sbjct: 333 VFKEMSEKGPSPNVVTYNSLLK 354
>gi|297823431|ref|XP_002879598.1| hypothetical protein ARALYDRAFT_902735 [Arabidopsis lyrata subsp.
lyrata]
gi|297325437|gb|EFH55857.1| hypothetical protein ARALYDRAFT_902735 [Arabidopsis lyrata subsp.
lyrata]
Length = 497
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 47/81 (58%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
GK ++ Y++ + K+G+ KAL Y + E K +V N +++ R+ KF+ +L
Sbjct: 189 GKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNTLINGYCRSSKFDLAL 248
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
LF ++K+ G P+ V++NT+
Sbjct: 249 DLFREMKEKGCEPNVVSFNTL 269
>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g16010-like [Cucumis sativus]
Length = 637
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 47/81 (58%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+ IK LGK G A ++ ++ + K +V + N +++ L R G+ E +LKLF
Sbjct: 299 TVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLF 358
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
K+ P+ VTYNTV ++
Sbjct: 359 GKMDSLQCAPNVVTYNTVIKA 379
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+++G T I S++ + L K G +A+E++ + + + N ILSCL R G
Sbjct: 537 MRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGM 596
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
FE + KL ++K G D++TY+++ ++
Sbjct: 597 FEMAAKLMREMKLKGFEYDSITYSSILEA 625
Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESD-KVNVFICNLILSCLVRNGKFESSLKLFDKI 70
Y++ I L G+ K E+YN I E + + + ++S + +++ + +LFD++
Sbjct: 197 YNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEM 256
Query: 71 KQSGLTPDAVTYNTV 85
K++GL P Y T+
Sbjct: 257 KENGLHPTEKIYTTI 271
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 47/81 (58%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+ IK LGK G A ++ ++ + K +V + N +++ L R G+ E +LKLF
Sbjct: 299 TVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLF 358
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
K+ P+ VTYNTV ++
Sbjct: 359 GKMDSLQCAPNVVTYNTVIKA 379
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+++G T I S++ + L K G +A+E++ + + + N ILSCL R G
Sbjct: 537 MRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGM 596
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
FE + KL ++K G D++TY+++ ++
Sbjct: 597 FEMAAKLMREMKLKGFEYDSITYSSILEA 625
Score = 37.7 bits (86), Expect = 0.93, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESD-KVNVFICNLILSCLVRNGKFESSLKLFDKI 70
Y++ I L G+ K E+YN I E + + + ++S + +++ + +LFD++
Sbjct: 197 YNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEM 256
Query: 71 KQSGLTPDAVTYNTV 85
K++GL P Y T+
Sbjct: 257 KENGLHPTEKIYTTI 271
>gi|225425456|ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
[Vitis vinifera]
Length = 792
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 50/79 (63%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I++Y+ I+ LGK G + A + + + + +++ + N +++ L + G+ + + KLF+
Sbjct: 655 IATYNVIIQGLGKMGRADLASAVLDMLMKQGGYLDIVMYNTLINALGKAGRIDEATKLFE 714
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
+++ SG+ PD VT+NT+ +
Sbjct: 715 QMRSSGINPDVVTFNTLIE 733
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+S I+ L G AL ++ + + + F +++ ++ + + ++++F+
Sbjct: 272 LCTYNSLIRVLCLVGKVKDALIVWEELKGSGHEPDAFTYRILIQGCSKSYRMDDAMRIFN 331
Query: 69 KIKQSGLTPDAVTYNTV 85
+++ +G PD + YNT+
Sbjct: 332 EMQYNGFCPDTIVYNTL 348
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 6 KTSISSYSSYIKFLGKNGNSL--KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESS 63
K S+ +YS + + + G + + +S+ D+ V L+L L+R GKF+S+
Sbjct: 80 KHSVGAYSHIFRIVCRAGAEFLDQVPLLMSSMKDDGVVVGQETFKLLLDSLIRAGKFDSA 139
Query: 64 LKLFDKIKQSGLTPDAVTYNTV 85
L++ D I++ G ++ Y++V
Sbjct: 140 LEILDHIEELGTGLNSYVYDSV 161
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 40/74 (54%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ + L K ++A +++ + ++ + + + N+++ L RNG+ + LF +K
Sbjct: 345 YNTLLDGLFKARKVMEACQVFEKMVEDGVRASCWTHNIVICGLFRNGRAAAGYTLFCDLK 404
Query: 72 QSGLTPDAVTYNTV 85
+ G D +TY+ V
Sbjct: 405 KKGKFVDGITYSIV 418
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 41/85 (48%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
M+Q G I Y++ I LGK G +A +++ + +V N ++ + G+
Sbjct: 682 MKQGGYLDIVMYNTLINALGKAGRIDEATKLFEQMRSSGINPDVVTFNTLIEIHAKAGQL 741
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+++ K + +G +P+ VT T+
Sbjct: 742 KAAYKFLKLMLDAGCSPNHVTDTTL 766
>gi|168054024|ref|XP_001779433.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669118|gb|EDQ55711.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 570
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 48/78 (61%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y + ++ G+ G A+ I+ + + + + N++++CL R G+ +LK+F+++
Sbjct: 150 TYGTMVRLFGRAGYIRAAVSIFEEMKGSGVQPDAIVYNIMIACLGRAGRMGHALKVFEEM 209
Query: 71 KQSGLTPDAVTYNTVYQS 88
++ G+ P+AVT +TV ++
Sbjct: 210 EREGVKPNAVTLSTVMET 227
Score = 41.6 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 39/75 (52%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +YS+ I GK G +A+ +Y + K + ++ R G +++ +F+
Sbjct: 113 VVTYSTMIDVYGKMGKYDEAIALYERVKQAGWKPDKVTYGTMVRLFGRAGYIRAAVSIFE 172
Query: 69 KIKQSGLTPDAVTYN 83
++K SG+ PDA+ YN
Sbjct: 173 EMKGSGVQPDAIVYN 187
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 22/28 (78%)
Query: 58 GKFESSLKLFDKIKQSGLTPDAVTYNTV 85
GK++ ++ L++++KQ+G PD VTY T+
Sbjct: 127 GKYDEAIALYERVKQAGWKPDKVTYGTM 154
>gi|356534408|ref|XP_003535747.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35130-like [Glycine max]
Length = 357
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 47/83 (56%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K++ +Y+ I GK G S AL +++ +T K N+ +++ VR G E + +
Sbjct: 38 KSTTETYTMLINLYGKAGKSFMALILFHEMTTHKCKPNICTYTALVNAFVREGLCEKAEE 97
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
+F++++++GL PD YN + ++
Sbjct: 98 VFEQMQEAGLEPDVYAYNALMET 120
>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 642
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G T ++ +Y+ +IK LGK G A ++ + + K +V + N +++ L + G+
Sbjct: 295 MKDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGKVGR 354
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
E +LKLF K++ P+ VTYNTV ++
Sbjct: 355 LEVTLKLFRKMESWQCKPNVVTYNTVIKA 383
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKV-NVFICNLILSCLVRNGKFESSL 64
K + ++Y+S I L + G+ K EIYN + ++ + + + ++S + G ++S++
Sbjct: 195 KPAATTYNSMILMLKQEGHLEKVHEIYNEMCNDGNCFPDTVTYSALISAFGKLGHYDSAI 254
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
+LFD++K++GL P A Y T+
Sbjct: 255 RLFDEMKENGLYPTAKIYTTL 275
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 44/81 (54%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
G +S Y+ IK GK G +A++++N + K +V+ N ++S +VR G + +
Sbjct: 476 GHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMIDEAQ 535
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
L + ++G +PD ++N +
Sbjct: 536 SLLRTMDENGCSPDLNSHNII 556
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M ++G ++S++ + L + G +A+E++ + K + N +L CL G
Sbjct: 541 MDENGCSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLGCLSHAGL 600
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
FE + KL ++ G + +TY ++ ++
Sbjct: 601 FEEAAKLMREMNLKGFEYNNITYTSILEA 629
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
S+Y S I L ++G+ +A+ ++N ++ K N+ +CN ++ L + G +LKL ++
Sbjct: 356 STYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNE 415
Query: 70 IKQSGLTPDAVTYNTV 85
+ ++G +PD TYN V
Sbjct: 416 MSENGCSPDIWTYNLV 431
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +++ I L + G+ ++ + N + N+F N+ + + +++L D
Sbjct: 216 IMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLD 275
Query: 69 KIKQSGLTPDAVTYNTV 85
+ + GLTPD +TYNT+
Sbjct: 276 GVGR-GLTPDVITYNTL 291
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M HG + + +Y+S + L K G + + + ++ N+ N++ + K
Sbjct: 486 MWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARK 545
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
E +L L ++++ GLTPD V + T+ +
Sbjct: 546 VEEALNLIEEMQNKGLTPDVVNFGTLMK 573
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 28 ALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
A+EI + + + +V N IL+ L + GK+E + F + + G P+ +TYN + +
Sbjct: 479 AIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTE 538
Query: 88 S 88
S
Sbjct: 539 S 539
>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SYS I L K ++A ++ ++ + + NV I ++ +NG E +++LF+++
Sbjct: 327 SYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERM 386
Query: 71 KQSGLTPDAVTYNTV 85
K G PDAVTY+ +
Sbjct: 387 KNEGFEPDAVTYSVL 401
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 39/74 (52%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ I L K+G +AL ++ + +E V+ +++ L + K E ++K +DK+
Sbjct: 468 YNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMI 527
Query: 72 QSGLTPDAVTYNTV 85
G+TP ++ +
Sbjct: 528 DKGITPTVASFRAL 541
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 37/71 (52%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+S I LGK G A ++ ++++ + + N I+ L ++GK + +L LF +++
Sbjct: 433 YASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRME 492
Query: 72 QSGLTPDAVTY 82
+ G T+
Sbjct: 493 EEGCDQTVYTF 503
Score = 34.3 bits (77), Expect = 9.1, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 39/74 (52%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
S+ +S IK G G + L ++ + + +++ N +++ LV + ES+ K+F+
Sbjct: 186 SAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEV 245
Query: 70 IKQSGLTPDAVTYN 83
+ + PD VTYN
Sbjct: 246 MDGGKIVPDTVTYN 259
>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SYS I L K ++A ++ ++ + + NV I ++ +NG E +++LF+++
Sbjct: 325 SYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERM 384
Query: 71 KQSGLTPDAVTYNTV 85
K G PDAVTY+ +
Sbjct: 385 KNEGFEPDAVTYSVL 399
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 39/74 (52%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ I L K+G +AL ++ + +E V+ +++ L + K E ++K +DK+
Sbjct: 466 YNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMI 525
Query: 72 QSGLTPDAVTYNTV 85
G+TP ++ +
Sbjct: 526 DKGITPTVASFRAL 539
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 37/71 (52%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+S I LGK G A ++ ++++ + + N I+ L ++GK + +L LF +++
Sbjct: 431 YASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRME 490
Query: 72 QSGLTPDAVTY 82
+ G T+
Sbjct: 491 EEGCDQTVYTF 501
Score = 34.3 bits (77), Expect = 9.3, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 39/74 (52%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
S+ +S IK G G + L ++ + + +++ N +++ LV + ES+ K+F+
Sbjct: 184 SAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEV 243
Query: 70 IKQSGLTPDAVTYN 83
+ + PD VTYN
Sbjct: 244 MDGGKIVPDTVTYN 257
>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Brachypodium distachyon]
Length = 571
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 42/77 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I + GN A EI + + NV N+ + CL R GK E + +L +++
Sbjct: 470 TYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEM 529
Query: 71 KQSGLTPDAVTYNTVYQ 87
+ GL P+ VTY+T+ +
Sbjct: 530 LEKGLVPNGVTYDTIKE 546
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 43/84 (51%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q++ K ++ +Y+ + + AL + +++ + + N I N +++ RNG +
Sbjct: 356 QKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWR 415
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
S L D+++ G+ D VTYN +
Sbjct: 416 SVSGLLDEMRMKGVRADIVTYNVL 439
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 34/65 (52%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
K+ N+ A+ ++ + + +V + ++ L GK E +KL D++K GL P+
Sbjct: 270 KDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLA 329
Query: 81 TYNTV 85
T N+V
Sbjct: 330 TLNSV 334
Score = 34.3 bits (77), Expect = 9.8, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 37/74 (50%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I +NG+ + + + + + ++ N+++ L G+ ++KL D++
Sbjct: 401 YNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEML 460
Query: 72 QSGLTPDAVTYNTV 85
GL P +TYNT+
Sbjct: 461 MVGLEPVHLTYNTI 474
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ IK L + GN K L ++ + + N CN++++ L R G + +L+ +
Sbjct: 584 TYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDM 643
Query: 71 KQSGLTPDAVTYNTV 85
GLTPD VTYN++
Sbjct: 644 IHRGLTPDIVTYNSL 658
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGL 75
I L + GN ALE + ++ N +++ L + G+ + +L LFDK++ G+
Sbjct: 624 INGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGI 683
Query: 76 TPDAVTYNTVYQSDHITW 93
PDA+TYNT+ I+W
Sbjct: 684 CPDAITYNTL-----ISW 696
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 40/77 (51%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I L K+ AL ++ ++ + K ++F N ++ L + KFE +L L+ +
Sbjct: 480 YNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML 539
Query: 72 QSGLTPDAVTYNTVYQS 88
G+ + +TYNT+ +
Sbjct: 540 LEGVIANTITYNTLIHA 556
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ G + ++ +Y+ I K G +A + + ++ + +N N ++S L ++ K
Sbjct: 433 MQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEK 492
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +L +F + G PD T+N++
Sbjct: 493 VQDALNMFGDMSSKGCKPDIFTFNSL 518
Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 37/74 (50%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y+S I L K G + +AL +++ + E + N ++S + G F+ + L
Sbjct: 652 IVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLS 711
Query: 69 KIKQSGLTPDAVTY 82
+ SG P+ VT+
Sbjct: 712 RGVDSGFIPNEVTW 725
>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Glycine max]
Length = 664
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 18 FLGKNGNSLKAL-EIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLT 76
LG++GN + +Y ++ E + NVF N++L L +NGK + + KL ++ + G
Sbjct: 153 LLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCV 212
Query: 77 PDAVTYNTV 85
PD V+Y TV
Sbjct: 213 PDGVSYTTV 221
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 42/79 (53%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ ++++YS+ + K G+ A E++N + + + NV + ++ L +N F+ + +
Sbjct: 385 RPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYR 444
Query: 66 LFDKIKQSGLTPDAVTYNT 84
L D + G P VT+NT
Sbjct: 445 LIDNMATDGCPPTVVTFNT 463
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ + + ++G +A E+ E V +CN ++ L R G+ L D++
Sbjct: 217 SYTTVVAAMCEDGRVEEAREVARRFGAEG---VVSVCNALICGLCREGRVGEVFGLMDEM 273
Query: 71 KQSGLTPDAVTYNTVYQSDHITWI 94
+G+ P+ V+Y++V I+W+
Sbjct: 274 VGNGVDPNVVSYSSV-----ISWL 292
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 46/81 (56%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+ S++++ I L G +A+E++N + + NV N I++ L + G ++ +F
Sbjct: 157 TASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVF 216
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
K++Q+G PD VTYNT+ S
Sbjct: 217 KKMEQNGCKPDVVTYNTIIDS 237
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 39/76 (51%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ SY++ I L K GN+ A++++ + K +V N I+ L ++ +++
Sbjct: 192 NVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFL 251
Query: 68 DKIKQSGLTPDAVTYN 83
++ G+ P+ TYN
Sbjct: 252 SEMLDRGIPPNVFTYN 267
>gi|356518400|ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Glycine max]
Length = 546
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 45/83 (54%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K +Y+S I FL +NG S +A+E+ + + + + N++L L R GKFE +L
Sbjct: 372 KPDAVTYTSLINFLCRNGKSDEAIELLEEMKENGCQADSVTFNVLLGGLCREGKFEEALD 431
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
+ +K+ Q G+ + +Y V S
Sbjct: 432 MVEKLPQQGVYLNKGSYRIVLNS 454
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 42/78 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +YS+ + L K G A + I K + +++ L RNGK + +++L
Sbjct: 339 NVYNYSALVDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKSDEAIELL 398
Query: 68 DKIKQSGLTPDAVTYNTV 85
+++K++G D+VT+N +
Sbjct: 399 EEMKENGCQADSVTFNVL 416
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 37/75 (49%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I + G +A + + NV+ + ++ L + GK E + + +I
Sbjct: 307 TYNVLINGFCRGGKPDRARNVIQFMKSNGCYPNVYNYSALVDGLCKVGKLEDAKGVLAEI 366
Query: 71 KQSGLTPDAVTYNTV 85
K SGL PDAVTY ++
Sbjct: 367 KGSGLKPDAVTYTSL 381
>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 44/78 (56%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ SY++ I LG++G +A+E++ + + N + N +L R G++E ++ LF
Sbjct: 170 NVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLF 229
Query: 68 DKIKQSGLTPDAVTYNTV 85
++ G PD TYNTV
Sbjct: 230 VGMEDEGCIPDLYTYNTV 247
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G++ S +Y+S +K + G KA+ ++ + DE +++ N ++ R G
Sbjct: 197 MKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGGL 256
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
F + +F ++++ G TPD VTYNT+
Sbjct: 257 FAEAEGVFLEMQRKGCTPDRVTYNTM 282
Score = 40.8 bits (94), Expect = 0.098, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 1 MQQHGKTSISSYS--SYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNG 58
+Q+H + + ++ + I LG+ G A EI+ ++ +V +LS + G
Sbjct: 20 LQEHLEYELKEHNCVTIISILGREGKLGLAREIFEGMSKAGVAPSVHAYTALLSGYAKQG 79
Query: 59 KFESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + LF+ +K+ G +P+ +TYNT+
Sbjct: 80 LLKEAWALFEAMKEKGCSPNVLTYNTL 106
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICN-LILSCLVRNGKFESSLKL 66
S+ +Y++ + K G +A ++ ++ ++ NV N LI +C R + + L
Sbjct: 64 SVHAYTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLINACTKRAYRLPDLVGL 123
Query: 67 FDKIKQSGLTPDAVTYN 83
F+++KQ+G+ P+ +TYN
Sbjct: 124 FEEMKQAGVQPNDITYN 140
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 33/46 (71%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
NV +++ L R+G+ + +++LF+++K+ G +P++ TYN++ ++
Sbjct: 170 NVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKA 215
>gi|255661072|gb|ACU25705.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 309
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 49/79 (62%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I++Y+ I+ LG+ G + A + + E +++ + N +++ L + G+ + + KLF+
Sbjct: 214 IATYNVIIQGLGEMGRADLANAVLEXLMKEGGYLDIVMYNTLINALGKAGRIDEANKLFE 273
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++K SG+ PD VTYNT+ +
Sbjct: 274 QMKASGINPDVVTYNTLIE 292
>gi|255661046|gb|ACU25692.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 429
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 48/81 (59%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
I++Y+ I+ LGK G + A + + +++ + N +++ L + G+ + + KL
Sbjct: 332 ADIATYNVIIQGLGKMGRADLANAVLEKLMKGGGYLDIVMYNTLINALGKAGRIDEANKL 391
Query: 67 FDKIKQSGLTPDAVTYNTVYQ 87
F+++K SG+ PD VTYNT+ +
Sbjct: 392 FEQMKASGINPDVVTYNTLIE 412
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
GK +YSS + L K G +A+ I N + K++ +CN +++ VR K E ++
Sbjct: 427 GKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAI 486
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
F +++ G +P V+YNT+
Sbjct: 487 NFFREMECKGCSPTIVSYNTL 507
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I SY++ IK L K +A + ++ K ++ C+L++ L + K E +L L+
Sbjct: 500 TIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLW 559
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ G PD YN +
Sbjct: 560 QQALDKGFKPDITMYNIL 577
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+ I L K G ++LEI+ +T + ++F + ++ L G + +++++
Sbjct: 256 NVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVY 315
Query: 68 DKIKQSGLTPDAVTYNTV 85
+I +S L DAVT+N +
Sbjct: 316 KEIVESSLVVDAVTHNAM 333
>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
Length = 789
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 47/78 (60%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+++++S I L K+GN AL +++ +T + F +++S L R+ + + + +LF
Sbjct: 195 NVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLF 254
Query: 68 DKIKQSGLTPDAVTYNTV 85
DK+K SG+ PD VT N +
Sbjct: 255 DKMKDSGVGPDFVTCNAL 272
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 40/76 (52%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
+S ++ L +G KA I + D D ++ N++++ + G F + KLF +
Sbjct: 490 ASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFRE 549
Query: 70 IKQSGLTPDAVTYNTV 85
++ GL+PD VTY T+
Sbjct: 550 MQFKGLSPDTVTYGTL 565
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ YS I+ L + +Y + +++ K +V++ +++ L GK +L+L +
Sbjct: 301 VRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLN 360
Query: 69 KIKQSGLTPDAVTYNTV 85
++ +SG+ PD V YN +
Sbjct: 361 EMTESGVVPDTVCYNVL 377
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+ + L + L AL +Y + + NV ++++ L ++G + +L LFD
Sbjct: 161 VYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFD 220
Query: 69 KIKQSGLTPDAVTYNTV 85
++ Q G+ PDA TY V
Sbjct: 221 EMTQRGILPDAFTYCVV 237
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y+ + K GN A +++ + + + +++ L+R + E + K+FD
Sbjct: 524 IYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFD 583
Query: 69 KIKQSGLTPDAVTYNTVYQSDHITWI 94
+++++G TPDA Y T+ +TW+
Sbjct: 584 QMEKNGCTPDAAVYRTM-----MTWM 604
>gi|255593595|ref|XP_002535907.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223521568|gb|EEF26477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 155
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I + G KA + N + ++S K ++F CN++L L G +++LKLF+
Sbjct: 53 TYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTW 112
Query: 71 KQSGLTPDAVTYNTV 85
G DAVTYNT+
Sbjct: 113 ISKGKAIDAVTYNTI 127
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ IK L + GN K L ++ + + N CN++++ L R G + +L+ +
Sbjct: 566 TYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDM 625
Query: 71 KQSGLTPDAVTYNTV 85
GLTPD VTYN++
Sbjct: 626 IHRGLTPDIVTYNSL 640
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGL 75
I L + GN ALE + ++ N +++ L + G+ + +L LFDK++ G+
Sbjct: 606 INGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGI 665
Query: 76 TPDAVTYNTVYQSDHITW 93
PDA+TYNT+ I+W
Sbjct: 666 CPDAITYNTL-----ISW 678
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 40/77 (51%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I L K+ AL ++ ++ + K ++F N ++ L + KFE +L L+ +
Sbjct: 462 YNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML 521
Query: 72 QSGLTPDAVTYNTVYQS 88
G+ + +TYNT+ +
Sbjct: 522 LEGVIANTITYNTLIHA 538
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ G + ++ +Y+ I K G +A + + ++ + +N N ++S L ++ K
Sbjct: 415 MQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEK 474
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +L +F + G PD T+N++
Sbjct: 475 VQDALNMFGDMSSKGCKPDIFTFNSL 500
Score = 34.7 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 37/74 (50%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y+S I L K G + +AL +++ + E + N ++S + G F+ + L
Sbjct: 634 IVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLS 693
Query: 69 KIKQSGLTPDAVTY 82
+ SG P+ VT+
Sbjct: 694 RGVDSGFIPNEVTW 707
>gi|15724390|gb|AAL06592.1| putative salt-inducible protein [Brassica nigra]
Length = 155
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNG-KFESSL 64
+ S+ SY++ I G+NG +LE+ + E ++ N +++ R G +E L
Sbjct: 41 RRSVFSYTALINAYGRNGRYETSLELLERMKREKISASILTYNTVINACARGGLDWEGLL 100
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
LF +++ G+ PD VTYNT+
Sbjct: 101 GLFAEMRHEGIQPDIVTYNTL 121
>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNG-KFESSLKL 66
++ SY++ I G+NG +LE+ N + E ++ N +++ R G +E L L
Sbjct: 168 TVYSYTAIINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGL 227
Query: 67 FDKIKQSGLTPDAVTYNTV 85
F +++ G+ PD +TYNT+
Sbjct: 228 FAEMRHEGIQPDVITYNTL 246
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 39/70 (55%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGL 75
I LG+ G K E+++ + V+ I++ RNG+F +SL+L + +KQ +
Sbjct: 141 ITLLGREGLLDKCREVFDEMPSNGVVRTVYSYTAIINAYGRNGQFHASLELLNGMKQERV 200
Query: 76 TPDAVTYNTV 85
+P +TYNTV
Sbjct: 201 SPSILTYNTV 210
Score = 34.3 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 42/79 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I+SY+ ++ + G+ +A+ ++ + N +++L+ ++G+++ LF
Sbjct: 310 ITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFL 369
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++K S PDA TYN + Q
Sbjct: 370 EMKVSNTDPDAGTYNILIQ 388
>gi|159464329|ref|XP_001690394.1| hypothetical protein CHLREDRAFT_114572 [Chlamydomonas reinhardtii]
gi|158279894|gb|EDP05653.1| predicted protein [Chlamydomonas reinhardtii]
Length = 287
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 46/80 (57%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K S ++Y++ I GK G KAL+I+ + + NV + ++S + G++E +L+
Sbjct: 137 KPSATTYTALISAYGKKGQVEKALDIFRDMIRRGCERNVITYSSLISACEKAGRWEMALE 196
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LF K+ + P+ VTYN++
Sbjct: 197 LFSKMHKENCKPNVVTYNSL 216
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 43/75 (57%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +YSS I K G ALE+++ + E+ K NV N +++ G +E + +LF
Sbjct: 174 NVITYSSLISACEKAGRWEMALELFSKMHKENCKPNVVTYNSLIAACSHGGHWEKASELF 233
Query: 68 DKIKQSGLTPDAVTY 82
++++ G PD++TY
Sbjct: 234 EQMQTQGCKPDSITY 248
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVN-VFICNLILSCLVRNGKF 60
+++ K ++ +Y+S I G+ KA E++ + + K + + C LI + R G++
Sbjct: 203 KENCKPNVVTYNSLIAACSHGGHWEKASELFEQMQTQGCKPDSITYCGLI-TAYERGGQW 261
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+LK F++++ G PDA +N++
Sbjct: 262 RRALKAFEQMQSQGCHPDAAVFNSL 286
>gi|449487793|ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 46/74 (62%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I LG+ G K EI++ + + +VF +++ RNG++E+SL+L +++K
Sbjct: 151 YTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMK 210
Query: 72 QSGLTPDAVTYNTV 85
+ ++P+ +TYNTV
Sbjct: 211 RERVSPNILTYNTV 224
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNG-KFESSLKL 66
S+ SY++ I G+NG +LE+ + E N+ N +++ R +E L L
Sbjct: 182 SVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGL 241
Query: 67 FDKIKQSGLTPDAVTYNTV 85
F +++ G+ PD VTYNT+
Sbjct: 242 FAEMRHEGVQPDLVTYNTL 260
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 44/77 (57%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
ISSY+ I+ K G+ +A++++ + N +++L+ ++G+++ +LF
Sbjct: 324 ISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFL 383
Query: 69 KIKQSGLTPDAVTYNTV 85
++K+S PDA TYN +
Sbjct: 384 QMKESSAEPDATTYNIL 400
>gi|449469490|ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 46/74 (62%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I LG+ G K EI++ + + +VF +++ RNG++E+SL+L +++K
Sbjct: 151 YTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMK 210
Query: 72 QSGLTPDAVTYNTV 85
+ ++P+ +TYNTV
Sbjct: 211 RERVSPNILTYNTV 224
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNG-KFESSLKL 66
S+ SY++ I G+NG +LE+ + E N+ N +++ R +E L L
Sbjct: 182 SVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGL 241
Query: 67 FDKIKQSGLTPDAVTYNTV 85
F +++ G+ PD VTYNT+
Sbjct: 242 FAEMRHEGVQPDLVTYNTL 260
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 44/77 (57%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
ISSY+ I+ K G+ +A++++ + N +++L+ ++G+++ +LF
Sbjct: 324 ISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFL 383
Query: 69 KIKQSGLTPDAVTYNTV 85
++K+S PDA TYN +
Sbjct: 384 QMKESSAEPDATTYNIL 400
>gi|356540373|ref|XP_003538664.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 881
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
YS + NG KA+E+ I + ++ ICN I+ + G+ + +LKLF K++
Sbjct: 227 YSKVVGIYRDNGMWKKAIEVLEEIRERGISLDTHICNSIIDTFGKYGELDEALKLFKKMQ 286
Query: 72 QSGLTPDAVTYNTV 85
+ G+ P+ VT+N++
Sbjct: 287 KEGVRPNIVTWNSL 300
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/69 (21%), Positives = 39/69 (56%)
Query: 20 GKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDA 79
+ G + + + + E + N+ + N++++ G++ ++ ++ IK+SG++PD
Sbjct: 410 AQQGLCEQVIMVLQIMEAEGIEPNIVMLNMLINAFGNAGRYMEAISVYHHIKESGVSPDV 469
Query: 80 VTYNTVYQS 88
VTY T+ ++
Sbjct: 470 VTYTTLMKA 478
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 35/72 (48%)
Query: 14 SYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQS 73
S I GK G +AL+++ + E + N+ N ++ + G F + LF +++
Sbjct: 264 SIIDTFGKYGELDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKAFHLFTDMQEQ 323
Query: 74 GLTPDAVTYNTV 85
GL PD + T+
Sbjct: 324 GLYPDPKIFVTI 335
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G + +I +++S IK+ K G+ +KA ++ + ++ + I I+SCL GK
Sbjct: 285 MQKEGVRPNIVTWNSLIKWHCKEGDFMKAFHLFTDMQEQGLYPDPKIFVTIISCLGEQGK 344
Query: 60 FESSLKLFDKIKQSG 74
++ K F+ +K G
Sbjct: 345 WDIIKKYFESMKIRG 359
>gi|357457245|ref|XP_003598903.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487951|gb|AES69154.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 767
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
M++ G I S + L + ALEI+ + ++S V+V I N+ + L +GK
Sbjct: 461 MKKLGFPVIDDLSKFFSHLVEKKGPEMALEIFTHLKEKS-YVSVEIYNIFMESLHLSGKV 519
Query: 61 ESSLKLFDKIKQSGLTPDAVTYN 83
E +L LFD+IK S L PD+ TYN
Sbjct: 520 EKALSLFDEIKGSDLEPDSSTYN 542
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDE-SDKVNVFICNLILSCLVRNG 58
M GK S + I+ G L+ +Y+ + ++ K VF+ N I+ LV+ G
Sbjct: 180 MDAQGKPPSEKQFEILIRMHSDAGRGLRVYHVYDKMRNKFGVKPRVFLYNRIMDALVKTG 239
Query: 59 KFESSLKLFDKIKQSGLTPDAVTY 82
+ +L +++ ++ GL ++VT+
Sbjct: 240 HLDLALSVYNDFREDGLVEESVTF 263
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 38/70 (54%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGL 75
IK L K G + LE+ + ++ K +VF ++ +V+ G + L+++ ++K+ +
Sbjct: 267 IKGLCKGGKIDEMLEVLGRMREKLCKPDVFAYTALVRIMVKEGNLDGCLRVWKEMKRDRV 326
Query: 76 TPDAVTYNTV 85
PD + Y T+
Sbjct: 327 DPDVMAYGTI 336
Score = 34.3 bits (77), Expect = 9.9, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 41/83 (49%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+++ S+ Y+ +++ L +G KAL +++ I + + N+ + CLV +G+
Sbjct: 495 LKEKSYVSVEIYNIFMESLHLSGKVEKALSLFDEIKGSDLEPDSSTYNIAILCLVDHGQI 554
Query: 61 ESSLKLFDKIKQSGLTPDAVTYN 83
+ + + +KI + P YN
Sbjct: 555 KEACECHNKIIEMSSIPSVAAYN 577
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ S + + L K+ AL + + +VF N+++ CL R G E++ LF+
Sbjct: 216 VRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFE 275
Query: 69 KIKQSGLTPDAVTYNTV 85
++K GL PD VTYN++
Sbjct: 276 EMKAKGLRPDIVTYNSL 292
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 41/80 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ I +Y+S I GK G A+ ++ + D + +V N +++C + + + +
Sbjct: 283 RPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFE 342
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+KQ GL P+ VTY+T+
Sbjct: 343 YLHGMKQRGLQPNVVTYSTL 362
Score = 38.1 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ G K ++ +Y I L K G +A+ ++ +T + N+ I ++ L +N
Sbjct: 557 MQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDC 616
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E + LF+++ G++PD + Y ++
Sbjct: 617 LEEAKNLFNEMLDKGISPDKLVYTSL 642
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 41/78 (52%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +Y+ I L + G+ A ++ + + + ++ N ++ + G ++ +F
Sbjct: 250 SVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVF 309
Query: 68 DKIKQSGLTPDAVTYNTV 85
+++K +G PD +TYN++
Sbjct: 310 EEMKDAGCEPDVITYNSL 327
Score = 34.3 bits (77), Expect = 9.2, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 38/74 (51%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ I K G + +A+ + + D K+ V +++ L + G + +++ FD +
Sbjct: 534 YTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMT 593
Query: 72 QSGLTPDAVTYNTV 85
++GL P+ + Y +
Sbjct: 594 RNGLQPNIMIYTAL 607
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 48/81 (59%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
SI +Y+ + L KN +AL+++ S+ + +V++ N+++ L+++G+ E ++ LF
Sbjct: 623 SIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLF 682
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
I +GL PD TY + ++
Sbjct: 683 ATISANGLVPDVTTYRLIAEN 703
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 6 KTSISSYSSYIK---FLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFES 62
+ I SY++ I+ +GK + K L+I S+ K N N +L R+G+ +
Sbjct: 516 RPDIISYNALIRGHCLVGKTDEASKLLDIMLSV---GLKPNECTYNTLLHGYCRDGRIDD 572
Query: 63 SLKLFDKIKQSGLTPDAVTYNTV 85
+ +F ++ +G+TP VTYNT+
Sbjct: 573 AYSVFQEMLSNGITPVVVTYNTI 595
Score = 34.7 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 40/75 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ + L K +A E+Y ++ + +++ N+IL+ L +N + +LK+F
Sbjct: 589 VVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQ 648
Query: 69 KIKQSGLTPDAVTYN 83
+ L D +T+N
Sbjct: 649 SLCSKDLQVDIITFN 663
>gi|428186270|gb|EKX55120.1| hypothetical protein GUITHDRAFT_53115, partial [Guillardia theta
CCMP2712]
Length = 363
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 49/83 (59%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ ++ +YS+ I K + AL + +T+E K ++ + + +++ + G +E + +
Sbjct: 165 QPNLQAYSAAISACEKAAEARPALGLLERMTNEKIKPDIIVYSAVMAACGKAGLWEPAAR 224
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
+F K+K+ GLTPD V Y+T+ Q+
Sbjct: 225 IFQKMKREGLTPDVVAYSTLIQA 247
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G T + +YS+ I+ + G +ALE++ + + NV ++ + G+
Sbjct: 229 MKREGLTPDVVAYSTLIQAYQRAGEWSRALEVFQLMEKAGVRPNVIAYTEAIAACAKAGE 288
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ SL L +++K L PDAV YN V
Sbjct: 289 WRRSLGLLERMKADKLRPDAVAYNFV 314
Score = 37.7 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 9/66 (13%)
Query: 28 ALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD---------KIKQSGLTPD 78
ALE+ SI E N +S L RNG++ +L +FD K+ L PD
Sbjct: 3 ALEVLKSIEKEGLTPTRVSYNAAMSALTRNGRWREALSMFDSVFSQTERNKVAARSLRPD 62
Query: 79 AVTYNT 84
VT++T
Sbjct: 63 TVTFST 68
>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
Length = 844
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 41/70 (58%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGL 75
I+ LG+ AL++ + I + ++V C IL RNGK++ ++ +F+++K GL
Sbjct: 204 IRILGRESKYSIALKLLDKIPIDKYSLDVRACTTILHAYSRNGKYKQAIAMFERMKDCGL 263
Query: 76 TPDAVTYNTV 85
+P VTYN +
Sbjct: 264 SPSLVTYNVM 273
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 8 SISSYSSYIKFLGKNGNSL-KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
S+ +Y+ + GK G S K L++ + + +E + + F C+ ++S R G + +
Sbjct: 266 SLVTYNVMLDVYGKMGRSWDKILDLLDEMRNEGLQFDEFTCSTVISACGREGLINEAKEF 325
Query: 67 FDKIKQSGLTPDAVTYNTVYQ 87
F ++K SG P VTYN + Q
Sbjct: 326 FVELKSSGYEPGTVTYNALLQ 346
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I G+ G +KAL+++N + NV N IL+ L + + E +K+ +
Sbjct: 410 TYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDM 469
Query: 71 KQSGLTPDAVTYNTV 85
+ +G P+ +T+NT+
Sbjct: 470 RINGCPPNRITWNTL 484
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ ++ GK G +AL I + D + ++ N +++ VR G +E + D +
Sbjct: 340 TYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTM 399
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ P+AVTY TV
Sbjct: 400 TRKGVMPNAVTYTTV 414
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 41 KVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
K ++ I N +LS +N +E + K+ D I++SGL PD VTYN++
Sbjct: 650 KPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSL 694
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 34/74 (45%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S + + G KA EI + + ++ N I+ R G + ++++ ++
Sbjct: 690 TYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEM 749
Query: 71 KQSGLTPDAVTYNT 84
G+ P TYNT
Sbjct: 750 TTRGICPCIFTYNT 763
>gi|356547448|ref|XP_003542124.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Glycine max]
Length = 445
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 47/77 (61%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ SYS Y+ L K G KA++++ I + K++V + N+++ + + + S+++F
Sbjct: 214 LHSYSIYMDILCKGGKPWKAVKLFKEIKKKGFKLDVVVYNIVIRAIGLSHGVDFSIRVFR 273
Query: 69 KIKQSGLTPDAVTYNTV 85
++K+ G+ P VTYNT+
Sbjct: 274 EMKELGIKPTVVTYNTL 290
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 47/83 (56%)
Query: 3 QHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFES 62
+H ++ +YS+ I K G +A++++ K +V + + ++ L +NG ES
Sbjct: 352 RHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVES 411
Query: 63 SLKLFDKIKQSGLTPDAVTYNTV 85
++ L D++ + G+ P+ VTYN++
Sbjct: 412 AVSLLDEMTKEGIRPNVVTYNSI 434
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNG-KFESSLKL 66
++ ++S+ I G++G +A++I+ S+ D K N+ N ++ + G +F+ L++
Sbjct: 111 TVYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEI 170
Query: 67 FDKIKQSGLTPDAVTYNTV 85
FD++ ++G+ PD +T+N++
Sbjct: 171 FDEMLRNGMQPDRITFNSL 189
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 37/73 (50%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
S+ I LG+ G A ++ + E V+ + I+S R+G ++K+F +K
Sbjct: 81 SAMISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKD 140
Query: 73 SGLTPDAVTYNTV 85
GL P+ VTYN V
Sbjct: 141 YGLKPNLVTYNAV 153
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ IK L + GN K L ++ + + N CN++++ L R G + +L+ +
Sbjct: 191 TYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDM 250
Query: 71 KQSGLTPDAVTYNTV 85
GLTPD VTYN++
Sbjct: 251 IHRGLTPDIVTYNSL 265
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGL 75
I L + GN ALE + ++ N +++ L + G+ + +L LFDK++ G+
Sbjct: 231 INGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGI 290
Query: 76 TPDAVTYNTVYQSDHITW 93
PDA+TYNT+ I+W
Sbjct: 291 CPDAITYNTL-----ISW 303
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 40/77 (51%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I L K+ AL ++ ++ + K ++F N ++ L + KFE +L L+ +
Sbjct: 87 YNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML 146
Query: 72 QSGLTPDAVTYNTVYQS 88
G+ + +TYNT+ +
Sbjct: 147 LEGVIANTITYNTLIHA 163
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ G + ++ +Y+ I K G +A + + ++ + +N N ++S L ++ K
Sbjct: 40 MQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEK 99
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +L +F + G PD T+N++
Sbjct: 100 VQDALNMFGDMSSKGCKPDIFTFNSL 125
Score = 34.3 bits (77), Expect = 9.8, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 37/74 (50%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y+S I L K G + +AL +++ + E + N ++S + G F+ + L
Sbjct: 259 IVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLS 318
Query: 69 KIKQSGLTPDAVTY 82
+ SG P+ VT+
Sbjct: 319 RGVDSGFIPNEVTW 332
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 44/79 (55%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
T + SYS I L K G +A+EI+ + ++ + F N++++ L ++ + E + L
Sbjct: 89 TDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSL 148
Query: 67 FDKIKQSGLTPDAVTYNTV 85
D+++ G +P VTY T+
Sbjct: 149 MDEMQARGFSPTVVTYTTL 167
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ SY + I K GN KA I++ + NV I N++L R+G+ E + +L D
Sbjct: 630 VFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLD 689
Query: 69 KIKQSGLTPDAVTYNTV 85
++ G P+AVTY T+
Sbjct: 690 EMSGKGFPPNAVTYCTI 706
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ + L KNG A EI++ + + +VF ++ + G + + +FD++
Sbjct: 597 TYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEM 656
Query: 71 KQSGLTPDAVTYNTV 85
Q+GLT + + YN +
Sbjct: 657 VQAGLTSNVIIYNML 671
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 36/65 (55%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
K G ++A + S+ ++ + ++++ LV+NGK + ++F +++ G+ PD
Sbjct: 572 KKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVF 631
Query: 81 TYNTV 85
+Y T+
Sbjct: 632 SYGTL 636
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 41/83 (49%)
Query: 3 QHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFES 62
+ GK + +Y+ I +L K GN A E+++ + + V +L+ + G+
Sbjct: 802 KFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSE 861
Query: 63 SLKLFDKIKQSGLTPDAVTYNTV 85
+FD++ +G+ PD + Y+ +
Sbjct: 862 MFSVFDEVIAAGIEPDNIMYSVI 884
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 44/75 (58%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y + + G NG+S +EI+N++ + NV ++ L + G+ +L++FD++
Sbjct: 427 TYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEM 486
Query: 71 KQSGLTPDAVTYNTV 85
KQ G+ P+ +YN++
Sbjct: 487 KQKGIVPEQYSYNSL 501
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M HG K + ++ +I + GK+G S+KA++ Y + + +V N +L L ++G+
Sbjct: 521 MDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGR 580
Query: 60 FESSLKLFDKIKQSGLTPDAVTY 82
+ ++F ++K G++PD +TY
Sbjct: 581 LGMAKRVFHELKAMGVSPDTITY 603
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 36/75 (48%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + LG+ G + + + + + N+ N IL CL +NG +L + +
Sbjct: 672 TYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSM 731
Query: 71 KQSGLTPDAVTYNTV 85
G PD +YNTV
Sbjct: 732 TTKGCIPDLSSYNTV 746
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ HG K ++ SY+ I+ LG+ +A I + +E K +V +++ L G+
Sbjct: 346 MEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGR 405
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +F K+K+S PD VTY T+
Sbjct: 406 ISDAKDVFWKMKKSDQKPDRVTYITL 431
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I SY+ I L K G L + + + + ++ NL++ L ++ + E ++ LF+
Sbjct: 1055 IKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFN 1114
Query: 69 KIKQSGLTPDAVTYNTV 85
++++ G+ P+ TYN++
Sbjct: 1115 EMQKKGIVPNLYTYNSL 1131
Score = 37.4 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 31/61 (50%)
Query: 23 GNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTY 82
GN+ K ++ + D+ ++ +I+ L + G+ L F ++ + GL PD +TY
Sbjct: 1034 GNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITY 1093
Query: 83 N 83
N
Sbjct: 1094 N 1094
Score = 34.7 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I LGK+ +A+ ++N + + N++ N ++ L + GK + K+++++
Sbjct: 1092 TYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEEL 1151
Query: 71 KQSGLTPDAVTYNTV 85
G P+ TYN +
Sbjct: 1152 LTKGWKPNVFTYNAL 1166
>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
Length = 973
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 44/75 (58%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y + + G NG+S +EI+N++ + NV ++ L + G+ +L++FD++
Sbjct: 337 TYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEM 396
Query: 71 KQSGLTPDAVTYNTV 85
KQ G+ P+ +YN++
Sbjct: 397 KQKGIVPEQYSYNSL 411
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M HG K + ++ +I + GK+G S+KA++ Y + + +V N +L L ++G+
Sbjct: 431 MDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGR 490
Query: 60 FESSLKLFDKIKQSGLTPDAVTY 82
+ ++F ++K G++PD +TY
Sbjct: 491 LGMAKRVFHELKAMGVSPDTITY 513
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 36/75 (48%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + LG+ G + + + + + N+ N IL CL +NG +L + +
Sbjct: 582 TYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSM 641
Query: 71 KQSGLTPDAVTYNTV 85
G PD +YNTV
Sbjct: 642 TTKGCIPDLSSYNTV 656
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ HG K ++ SY+ I+ LG+ +A I + +E K +V +++ L G+
Sbjct: 256 MEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGR 315
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +F K+K+S PD VTY T+
Sbjct: 316 ISDAKDVFWKMKKSDQKPDRVTYITL 341
>gi|297849786|ref|XP_002892774.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338616|gb|EFH69033.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 883
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++HG + YS+ I+ K N KA +I+N + ++ ++N I + IL C + G
Sbjct: 317 MEEHGIDPDVYVYSAIIEGHRKTMNIPKAFDIFNKMVEKGKRINCVIGSSILQCCCQMGN 376
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
F + LF++ ++ + D V YN + +
Sbjct: 377 FSGAYDLFEEFRELNIPLDRVCYNVAFDA 405
>gi|116789832|gb|ABK25404.1| unknown [Picea sitchensis]
Length = 278
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +Y++ I GK A++I+NS+ V+ + ++SC + G F+ + KLF
Sbjct: 9 SLQTYNTMISVYGKARELQNAVQIFNSLQKSGLSVDEKTYSNMISCYGKAGFFQDAAKLF 68
Query: 68 DKIKQSGLTPDAVTYNTV 85
+++Q G+ P VTYNT+
Sbjct: 69 SRMQQEGIKPGKVTYNTM 86
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS+ I GK G A ++++ + E K N +L R+G + ++F+ +
Sbjct: 47 TYSNMISCYGKAGFFQDAAKLFSRMQQEGIKPGKVTYNTMLDAYARSGLHTRAEEVFNDM 106
Query: 71 KQSGLTPDAVTY 82
+ G +PD+ TY
Sbjct: 107 QDEGYSPDSYTY 118
>gi|356495758|ref|XP_003516740.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 554
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
YS + NG KA+E+ I + ++ ICN I+ + G+ + +LKLF K++
Sbjct: 224 YSKVVGIYRDNGMWKKAIEVLEEIRERGISLDTHICNSIIDTFGKYGELDEALKLFKKMQ 283
Query: 72 QSGLTPDAVTYNTV 85
+ G+ P+ VT+N++
Sbjct: 284 KEGVRPNIVTWNSL 297
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 33/51 (64%)
Query: 38 ESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
E + N+ + N++++ G++ ++ ++ IK+SG++PD VTY T+ ++
Sbjct: 425 EGIEPNIVMLNMLINAFGNAGRYMEAMSVYHHIKESGVSPDVVTYTTLMKA 475
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
+S I GK G +AL+++ + E + N+ N ++ + G F S LF +++
Sbjct: 260 NSIIDTFGKYGELDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKSFHLFTDMQE 319
Query: 73 SGLTPDAVTYNTV 85
GL PD + T+
Sbjct: 320 QGLYPDPKIFVTI 332
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 45/75 (60%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++++ L +N + AL++ + + E +VF N++++CL +NG+ E + + +++
Sbjct: 288 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347
Query: 71 KQSGLTPDAVTYNTV 85
G PD T+NT+
Sbjct: 348 VDRGCLPDITTFNTL 362
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 47/77 (61%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I+++++ I L +AL++ +T + +V+ N++++ L + G +L+LF+
Sbjct: 356 ITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFE 415
Query: 69 KIKQSGLTPDAVTYNTV 85
++K SG TPD VTYNT+
Sbjct: 416 EMKNSGCTPDEVTYNTL 432
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S + K G+ KA +I ++T +V+V +++ L + G+ + +LK+ +
Sbjct: 533 TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592
Query: 71 KQSGLTPDAVTYNTVYQS 88
+ G+ P YN V QS
Sbjct: 593 RIKGMRPTPKAYNPVLQS 610
Score = 37.4 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 41/85 (48%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+Q+ + +Y+ + L KNG +A I N + D ++ N +++ L +
Sbjct: 313 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 372
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
E +L L ++ G++PD T+N +
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNIL 397
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 39/82 (47%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + +Y + I L K G + AL++ + + + N +L L R +L
Sbjct: 563 EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALS 622
Query: 66 LFDKIKQSGLTPDAVTYNTVYQ 87
LF ++ + G PDA+TY V++
Sbjct: 623 LFREMAEVGEPPDALTYKIVFR 644
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 45/75 (60%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++++ L +N + AL++ + + E +VF N++++CL +NG+ E + + +++
Sbjct: 288 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347
Query: 71 KQSGLTPDAVTYNTV 85
G PD T+NT+
Sbjct: 348 VDRGCLPDITTFNTL 362
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 47/77 (61%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I+++++ I L +AL++ +T + +V+ N++++ L + G +L+LF+
Sbjct: 356 ITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFE 415
Query: 69 KIKQSGLTPDAVTYNTV 85
++K SG TPD VTYNT+
Sbjct: 416 EMKNSGCTPDEVTYNTL 432
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S + K G+ KA +I ++T +V+V +++ L + G+ + +LK+ +
Sbjct: 533 TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592
Query: 71 KQSGLTPDAVTYNTVYQS 88
+ G+ P YN V QS
Sbjct: 593 RIKGMRPTPKAYNPVLQS 610
Score = 37.4 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 41/85 (48%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+Q+ + +Y+ + L KNG +A I N + D ++ N +++ L +
Sbjct: 313 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 372
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
E +L L ++ G++PD T+N +
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNIL 397
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 39/82 (47%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + +Y + I L K G + AL++ + + + N +L L R +L
Sbjct: 563 EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALS 622
Query: 66 LFDKIKQSGLTPDAVTYNTVYQ 87
LF ++ + G PDA+TY V++
Sbjct: 623 LFREMAEVGEPPDALTYKIVFR 644
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 45/75 (60%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++++ L +N + AL++ + + E +VF N++++CL +NG+ E + + +++
Sbjct: 288 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347
Query: 71 KQSGLTPDAVTYNTV 85
G PD T+NT+
Sbjct: 348 VDRGCLPDITTFNTL 362
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 47/77 (61%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I+++++ I L +AL++ +T + +V+ N++++ L + G +L+LF+
Sbjct: 356 ITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFE 415
Query: 69 KIKQSGLTPDAVTYNTV 85
++K SG TPD VTYNT+
Sbjct: 416 EMKNSGCTPDEVTYNTL 432
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S + K G+ KA +I ++T +V+V +++ L + G+ + +LK+ +
Sbjct: 533 TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592
Query: 71 KQSGLTPDAVTYNTVYQS 88
+ G+ P YN V QS
Sbjct: 593 RIKGMRPTPKAYNPVLQS 610
Score = 37.4 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 41/85 (48%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+Q+ + +Y+ + L KNG +A I N + D ++ N +++ L +
Sbjct: 313 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 372
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
E +L L ++ G++PD T+N +
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNIL 397
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 39/82 (47%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + +Y + I L K G + AL++ + + + N +L L R +L
Sbjct: 563 EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALS 622
Query: 66 LFDKIKQSGLTPDAVTYNTVYQ 87
LF ++ + G PDA+TY V++
Sbjct: 623 LFREMAEVGEPPDALTYKIVFR 644
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1080
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 44/75 (58%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y + + G NG+S +EI+N++ + NV ++ L + G+ +L++FD++
Sbjct: 302 TYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEM 361
Query: 71 KQSGLTPDAVTYNTV 85
KQ G+ P+ +YN++
Sbjct: 362 KQKGIVPEQYSYNSL 376
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M HG K + ++ +I + GK+G S+KA++ Y + + +V N +L L ++G+
Sbjct: 396 MDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGR 455
Query: 60 FESSLKLFDKIKQSGLTPDAVTY 82
+ ++F ++K G++PD +TY
Sbjct: 456 LGMAKRVFHELKAMGVSPDTITY 478
Score = 42.4 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 36/75 (48%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + LG+ G + + + + + N+ N IL CL +NG +L + +
Sbjct: 547 TYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSM 606
Query: 71 KQSGLTPDAVTYNTV 85
G PD +YNTV
Sbjct: 607 TTKGCIPDLSSYNTV 621
Score = 41.2 bits (95), Expect = 0.069, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ HG K ++ SY+ I+ LG+ +A I + +E K +V +++ L G+
Sbjct: 221 MEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGR 280
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +F K+K+S PD VTY T+
Sbjct: 281 ISDAKDVFWKMKKSDQKPDRVTYITL 306
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I SY+ I L K G L + + + + ++ NL++ L ++ + E ++ LF+
Sbjct: 930 IKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFN 989
Query: 69 KIKQSGLTPDAVTYNTV 85
++++ G+ P+ TYN++
Sbjct: 990 EMQKKGIVPNLYTYNSL 1006
Score = 37.7 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G ++ +Y+S I LGK G + +A ++Y + + K NVF N ++ +G
Sbjct: 991 MQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGS 1050
Query: 60 FESSLKLFDKIKQSGLTPDAVTY 82
+S+ + ++ G P++ TY
Sbjct: 1051 TDSAYAAYGRMIVGGCLPNSSTY 1073
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 31/61 (50%)
Query: 23 GNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTY 82
GN+ K ++ + D+ ++ +I+ L + G+ L F ++ + GL PD +TY
Sbjct: 909 GNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITY 968
Query: 83 N 83
N
Sbjct: 969 N 969
Score = 34.3 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I LGK+ +A+ ++N + + N++ N ++ L + GK + K+++++
Sbjct: 967 TYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEEL 1026
Query: 71 KQSGLTPDAVTYNTV 85
G P+ TYN +
Sbjct: 1027 LTKGWKPNVFTYNAL 1041
>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 585
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 43/70 (61%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
S ++ L KNG +A+E++N + + K+++ N ++ L + K E++ +LF+K+ Q
Sbjct: 416 SVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQ 475
Query: 73 SGLTPDAVTY 82
GL PD VTY
Sbjct: 476 EGLQPDVVTY 485
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
Query: 1 MQQHGK-TSISSYSSYIKFLGKNGNSLKALEIYNSITDESD------KVNVFICNLILSC 53
MQ+ G ++ +Y + IK L + GN AL+++ + + + K N+F N+I+
Sbjct: 187 MQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDE 246
Query: 54 LVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
L + GK++ + +LF+++ G+ PD VT++ +
Sbjct: 247 LCKIGKWKEAKRLFNEMVDQGVRPDVVTFSAL 278
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 44/80 (55%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K I S++ I L K A E++ ++ E + +V ++++ +NG+ +++
Sbjct: 444 KLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANI 503
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LF ++++G TP+ +TY+ +
Sbjct: 504 LFQMMEENGCTPNLLTYSAL 523
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y++ I + G KA + +N + +S K ++F CN++L L G + +LKLF+
Sbjct: 563 TTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNT 622
Query: 70 IKQSGLTPDAVTYNTV 85
G DAVTYNT+
Sbjct: 623 WISKGKAIDAVTYNTI 638
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 45/75 (60%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY + I K+G S++A+++++ + ++ ++ N ++ L +GK + S+ +++
Sbjct: 494 SYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNEL 553
Query: 71 KQSGLTPDAVTYNTV 85
+SGL PD TYNT+
Sbjct: 554 LESGLVPDETTYNTI 568
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ I +SLK E+ + + + K N N+++ V+ GK +++
Sbjct: 352 VVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELR 411
Query: 69 KIKQSGLTPDAVTYNTV 85
K+++SG +PD VT+NT+
Sbjct: 412 KMEESGFSPDCVTFNTL 428
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 34/62 (54%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVY 86
KAL+++N+ + ++ N I+S L + +FE + L ++++ L PD TYN +
Sbjct: 615 KALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAIL 674
Query: 87 QS 88
+
Sbjct: 675 SA 676
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 29/43 (67%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
+V+ N+++ L ++GK + + +L D+++ L PD VTYNT+
Sbjct: 316 DVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTL 358
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 1 MQQHG--KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNG 58
MQ+H K + Y+ I +G+ G KA E++ + + NV+ +++ RNG
Sbjct: 64 MQRHQWCKPNEHVYTIMIGIMGREGMLDKASELFEDMPLNDVEWNVYSFTALINAYGRNG 123
Query: 59 KFESSLKLFDKIKQSGLTPDAVTYNTV 85
+ E+SL L ++K+ +TP+ +TYNTV
Sbjct: 124 QHEASLHLLARMKREKVTPNLITYNTV 150
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 43/78 (55%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + G+ E+ + + +V N+++ R GK+ ++ K+F ++
Sbjct: 217 TYNALVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQM 276
Query: 71 KQSGLTPDAVTYNTVYQS 88
+++G TPD VT++T+ ++
Sbjct: 277 QEAGCTPDVVTFSTLLEA 294
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+Q G + +Y+ I+ G+ G A +++ + + +V + +L ++G
Sbjct: 241 MEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGC 300
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
++ LF +K+ G PD TYNT+ Q
Sbjct: 301 YDEVRLLFTDMKERGTEPDVNTYNTLIQ 328
>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 933
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 15 YIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSG 74
+ KF G++ ALE+Y+ + E KVN FI + +++ L +NGK E ++ LF SG
Sbjct: 459 FFKFQGQDA----ALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSG 514
Query: 75 LTPDAVTYNTV 85
L+ D V Y T+
Sbjct: 515 LSLDHVNYTTL 525
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 40/78 (51%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I L K G+ A + + D + + + N+ ++CL GKF+ + ++
Sbjct: 521 NYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEM 580
Query: 71 KQSGLTPDAVTYNTVYQS 88
+ GL PD TYNT+ S
Sbjct: 581 RNMGLKPDQSTYNTMIVS 598
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 44/81 (54%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++++Y+ +I + + +A ++Y + ++V + +++ L R+G+F + LF
Sbjct: 238 NVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALF 297
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
++ + G P+ VTY T+ S
Sbjct: 298 REMDKVGAAPNHVTYCTLIDS 318
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 44/83 (53%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K S+Y++ I + G + KAL++ + + S K N+ N +++ L G E +
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
L +++ +G +P ++T+ V Q+
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQA 668
>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
Length = 933
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 15 YIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSG 74
+ KF G++ ALE+Y+ + E KVN FI + +++ L +NGK E ++ LF SG
Sbjct: 459 FFKFQGQDA----ALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSG 514
Query: 75 LTPDAVTYNTV 85
L+ D V Y T+
Sbjct: 515 LSLDHVNYTTL 525
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 40/78 (51%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I L K G+ A + + D + + + N+ ++CL GKF+ + ++
Sbjct: 521 NYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEM 580
Query: 71 KQSGLTPDAVTYNTVYQS 88
+ GL PD TYNT+ S
Sbjct: 581 RNMGLKPDQSTYNTMIVS 598
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 44/81 (54%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++++Y+ +I + + +A ++Y + ++V + +++ L R+G+F + LF
Sbjct: 238 NVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALF 297
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
++ + G P+ VTY T+ S
Sbjct: 298 REMDKVGAAPNHVTYCTLIDS 318
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 44/83 (53%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K S+Y++ I + G + KAL++ + + S K N+ N +++ L G E +
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
L +++ +G +P ++T+ V Q+
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQA 668
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 45/75 (60%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++++ L +N + AL++ + + E +VF N++++CL +NG+ E + + +++
Sbjct: 196 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 255
Query: 71 KQSGLTPDAVTYNTV 85
G PD T+NT+
Sbjct: 256 VDRGCLPDITTFNTL 270
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 47/77 (61%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I+++++ I L +AL++ +T + +V+ N++++ L + G +L+LF+
Sbjct: 264 ITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFE 323
Query: 69 KIKQSGLTPDAVTYNTV 85
++K SG TPD VTYNT+
Sbjct: 324 EMKNSGCTPDEVTYNTL 340
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S + K G+ KA +I ++T +V+V +++ L + G+ + +LK+ +
Sbjct: 441 TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 500
Query: 71 KQSGLTPDAVTYNTVYQS 88
+ G+ P YN V QS
Sbjct: 501 RIKGMRPTPKAYNPVLQS 518
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 41/85 (48%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+Q+ + +Y+ + L KNG +A I N + D ++ N +++ L +
Sbjct: 221 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 280
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
E +L L ++ G++PD T+N +
Sbjct: 281 EEALDLARQVTVKGVSPDVYTFNIL 305
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 39/82 (47%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + +Y + I L K G + AL++ + + + N +L L R +L
Sbjct: 471 EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALS 530
Query: 66 LFDKIKQSGLTPDAVTYNTVYQ 87
LF ++ + G PDA+TY V++
Sbjct: 531 LFREMAEVGEPPDALTYKIVFR 552
>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
Length = 1013
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 15 YIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSG 74
+ KF G++ ALE+Y+ + E KVN FI + +++ L +NGK E ++ LF SG
Sbjct: 459 FFKFQGQDA----ALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSG 514
Query: 75 LTPDAVTYNTV 85
L+ D V Y T+
Sbjct: 515 LSLDHVNYTTL 525
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 40/78 (51%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I L K G+ A + + D + + + N+ ++CL GKF+ + ++
Sbjct: 521 NYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEM 580
Query: 71 KQSGLTPDAVTYNTVYQS 88
+ GL PD TYNT+ S
Sbjct: 581 RNMGLKPDQSTYNTMIVS 598
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 44/81 (54%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++++Y+ +I + + +A ++Y + ++V + +++ L R+G+F + LF
Sbjct: 238 NVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALF 297
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
++ + G P+ VTY T+ S
Sbjct: 298 REMDKVGAAPNHVTYCTLIDS 318
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 44/83 (53%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K S+Y++ I + G + KAL++ + + S K N+ N +++ L G E +
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
L +++ +G +P ++T+ V Q+
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQA 668
>gi|15220863|ref|NP_178203.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200729|sp|Q9SAH2.1|PP137_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80880, mitochondrial; Flags: Precursor
gi|6503300|gb|AAF14676.1|AC011713_24 Contains PF|01535 Domain of unknown function [Arabidopsis thaliana]
gi|91806121|gb|ABE65789.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332198342|gb|AEE36463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 540
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SYS I K GN +L +Y+ + + + N ++ L R F+ ++KL K+
Sbjct: 296 SYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKL 355
Query: 71 KQSGLTPDAVTYNTV 85
+ GL PD+VTYN++
Sbjct: 356 NEEGLKPDSVTYNSM 370
>gi|356541205|ref|XP_003539071.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g01570-like [Glycine max]
Length = 768
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
T I++Y+ I+ LGK G + A + + + + +++ + N +++ L + + + K
Sbjct: 629 PTDIATYNMIIQGLGKMGRADLASAVLDRLLRQGGYLDIVMYNTLINALGKASRIDEVNK 688
Query: 66 LFDKIKQSGLTPDAVTYNTVYQ 87
LF++++ SG+ PD VTYNT+ +
Sbjct: 689 LFEQMRSSGINPDVVTYNTLIE 710
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ +G + +Y+S + K ++A +++ + E + + + N+++ L RNG+
Sbjct: 311 MQSNGFRPDTLAYNSLLDGHFKATKVMEACQLFEKMVQEGVRPSCWTYNILIHGLFRNGR 370
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E++ +F +K+ G D +TY+ V
Sbjct: 371 AEAAYTMFCDLKKKGQFVDGITYSIV 396
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFI-CNLILSCLVRNGKFESSLKLF 67
+ +Y+S I L + G A+ +Y + + + + F NLI +C + + E ++++F
Sbjct: 250 LCTYNSLITALCRLGKVDDAITVYEELNGSAHQPDRFTYTNLIQAC-SKTYRMEDAIRIF 308
Query: 68 DKIKQSGLTPDAVTYNTV 85
++++ +G PD + YN++
Sbjct: 309 NQMQSNGFRPDTLAYNSL 326
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 41/81 (50%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+ ++Y +K K GN KAL+I + N I +I+ R G F ++ K++
Sbjct: 305 TAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVW 364
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
+ + +GL PD VTYN + +
Sbjct: 365 EDMVSAGLKPDIVTYNILVHA 385
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 43/80 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I +Y+S + K G+ KALE+++ I + V N +LS L + + E++ +
Sbjct: 410 TIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLML 469
Query: 68 DKIKQSGLTPDAVTYNTVYQ 87
D++ +G+ P+ +Y + +
Sbjct: 470 DEMLANGVVPNERSYTALTE 489
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 45/75 (60%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++++ L +NG+ AL++ + + E +VF N +++CL +NG+ + + + +++
Sbjct: 302 TYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQM 361
Query: 71 KQSGLTPDAVTYNTV 85
G PD T+NT+
Sbjct: 362 VDRGCLPDTTTFNTL 376
Score = 41.6 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
+++++ I L +AL++ +T + +V+ N++++ L + G ++LF++
Sbjct: 371 TTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEE 430
Query: 70 IKQSGLTPDAVTYNTVYQSDHI 91
+K SG PD VTYN + DH+
Sbjct: 431 MKSSGCAPDEVTYNILI--DHL 450
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 40/85 (47%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+Q+ + +Y++ I L KNG +A I N + D + N ++ L +
Sbjct: 327 LQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRL 386
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
E +L L ++ GL+PD T+N +
Sbjct: 387 EEALDLARELTVKGLSPDVYTFNIL 411
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S + K G+ KA +I ++T +++V +++ L + G+ + +LKL +
Sbjct: 547 TYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGM 606
Query: 71 KQSGLTPDAVTYNTVYQS 88
+ G+ P YN V QS
Sbjct: 607 RIKGIRPTPKAYNPVIQS 624
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 23 GNSLKALE-IYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVT 81
G+ +K LE +YN +TD + +V N ++ L R + +++ + +++ + PD T
Sbjct: 173 GSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETT 232
Query: 82 YNTVYQ 87
+ T+ Q
Sbjct: 233 FTTLMQ 238
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 38/79 (48%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y + I L K G + AL++ + + + N ++ L R +L LF
Sbjct: 580 VVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFR 639
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++ + G PDA+TY V++
Sbjct: 640 EMTEVGEPPDALTYKIVFR 658
Score = 34.3 bits (77), Expect = 9.1, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 37/75 (49%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I L G + AL++ + + N I+ L + + E + ++FD++
Sbjct: 442 TYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQM 501
Query: 71 KQSGLTPDAVTYNTV 85
G++ AVT+NT+
Sbjct: 502 DAHGISRSAVTFNTL 516
>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 42/70 (60%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGL 75
+K LG+ A ++++ I E ++V C +L R GK++ ++++F+K+K++GL
Sbjct: 209 VKMLGRESQYSIASKLFDIIPVEEYSLDVKACTTVLHAYARTGKYKRAIEIFEKMKETGL 268
Query: 76 TPDAVTYNTV 85
P VTYN +
Sbjct: 269 DPTLVTYNVM 278
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++Y+S ++ GK G +AL I + D + + + N +++ VR G +
Sbjct: 340 KPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAA 399
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+ D + G+ P+A+TY TV
Sbjct: 400 VIDTMASKGVMPNAITYTTV 419
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I GK G++ KALE++ + + NV N +L L + + E +K+ +
Sbjct: 415 TYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDM 474
Query: 71 KQSGLTPDAVTYNTV 85
K +G PD +T+NT+
Sbjct: 475 KLNGCPPDRITWNTM 489
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 26 LKALE-IYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNT 84
LK +E ++ + + K+++ + N +LS VRN K E + ++ D I SGL P+ VTYN+
Sbjct: 639 LKGMERAFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNS 698
Query: 85 V 85
+
Sbjct: 699 L 699
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKA-LEIYNSITDESDKVNVFICNLILSCLVRNG 58
M++ G ++ +Y+ + GK G + LE+ + + + + + F C ++S R G
Sbjct: 263 MKETGLDPTLVTYNVMLDVYGKMGRAWSMILELLDEMRSKGLEFDEFTCTTVISACGREG 322
Query: 59 KFESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
+ + + FD +K +G P TYN++ Q
Sbjct: 323 ILDEARRFFDDLKLNGYKPGTATYNSMLQ 351
>gi|302820365|ref|XP_002991850.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
gi|300140388|gb|EFJ07112.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
Length = 425
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G T + +Y+ I+ K GN KA E++ + NV NL++ LV+ G+
Sbjct: 285 MRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGR 344
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
++ + ++ +K+ G+ PDA+T + Q
Sbjct: 345 YQDARDIYFDMKKKGILPDAITATVLQQ 372
Score = 41.6 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
+ +HG K + +Y I+ L K GN + A+E+ + + + + +CN++L L +
Sbjct: 40 LDKHGSKPNAYTYKCVIQSLVKAGNVVLAMELLDKMIKTGLEPDTLLCNVVLDGLGKANM 99
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+ + KLF +K G D TY + +S
Sbjct: 100 MDEACKLFASMKSMGCPADDYTYAILIRS 128
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+ +S I + + G + A EI+ + VN N +L C + GK + + D++
Sbjct: 191 TLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEM 250
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ P+++T+NT+
Sbjct: 251 EARGIKPNSITFNTL 265
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G T S +Y++ I K G A+ + + D++ + + N +++ + R G+
Sbjct: 145 MEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGR 204
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E + ++F+++K+SG+ + V++N +
Sbjct: 205 TELACEIFERMKKSGVAVNTVSFNAM 230
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 38/78 (48%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
S+++ + GK G A + + + K N N +++CL R + K+ ++
Sbjct: 226 SFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEM 285
Query: 71 KQSGLTPDAVTYNTVYQS 88
+ +GLTPD TY + ++
Sbjct: 286 RSAGLTPDVFTYTCMIEA 303
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 36/73 (49%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
++ I G++ K ++ + + K N + ++ LV+ G +++L DK+ +
Sbjct: 18 NAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMELLDKMIK 77
Query: 73 SGLTPDAVTYNTV 85
+GL PD + N V
Sbjct: 78 TGLEPDTLLCNVV 90
>gi|168011113|ref|XP_001758248.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690704|gb|EDQ77070.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 658
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G + S S Y + K G +A+E++ S+ + ++N+ + NL+++ GK
Sbjct: 490 MKSQGLQPSTSVYCALANSYAKRGLCEQAMEVFKSMEKDGVELNLSMLNLLINAFGVAGK 549
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+ + +FD I + G++PD VTY T+ ++
Sbjct: 550 YVEAFSVFDYILEVGMSPDVVTYTTLMKA 578
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 48 NLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
N I+ R + E++L+L ++++ SG PD V Y V+Q+
Sbjct: 117 NAIVGTCAREDRLETALELMNQMRGSGFQPDNVNYTLVFQA 157
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 29/48 (60%)
Query: 41 KVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
K N FI N+++ + G+ +++ F ++ + G PD VT+N++ ++
Sbjct: 356 KPNQFIFNILIDTYGKFGRLPQAMRTFAQMDKEGFKPDVVTWNSLIEA 403
>gi|7268200|emb|CAB77727.1| hypothetical protein [Arabidopsis thaliana]
Length = 454
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 49/79 (62%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I++Y+ I+ LGK G + A + + +T + +++ + N +++ L + + + + +LFD
Sbjct: 211 IATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFD 270
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
+K +G+ PD V+YNT+ +
Sbjct: 271 HMKSNGINPDVVSYNTMIE 289
>gi|42566234|ref|NP_192066.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75161629|sp|Q8VZE4.1|PP299_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g01570
gi|18086402|gb|AAL57659.1| AT4g01570/T15B16_21 [Arabidopsis thaliana]
gi|24797024|gb|AAN64524.1| At4g01570/T15B16_21 [Arabidopsis thaliana]
gi|332656643|gb|AEE82043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 805
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 49/81 (60%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
I++Y+ I+ LGK G + A + + +T + +++ + N +++ L + + + + +L
Sbjct: 663 ADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQL 722
Query: 67 FDKIKQSGLTPDAVTYNTVYQ 87
FD +K +G+ PD V+YNT+ +
Sbjct: 723 FDHMKSNGINPDVVSYNTMIE 743
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 34/59 (57%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
+A +++ + E + + + N+++ L RNG+ E+ LF +K+ G DA+T++ V
Sbjct: 377 EACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIV 435
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 45/80 (56%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K S ++YS + + + G + ++ S+ ++ ++ + ++L L+R+GKFES+L
Sbjct: 89 KHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALG 148
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+ D +++ G + Y++V
Sbjct: 149 VLDYMEELGDCLNPSVYDSV 168
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M Q G + S +Y+ I L +NG + ++ + + V+ +++ L R GK
Sbjct: 385 MVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGK 444
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQSDH 90
E ++KL ++++ G + D VT +++ H
Sbjct: 445 LEGAVKLVEEMETRGFSVDLVTISSLLIGFH 475
>gi|297814175|ref|XP_002874971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320808|gb|EFH51230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 802
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 50/79 (63%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I++Y+ I+ LGK G + A + + +T + +++ + N +++ + + + +++ +LFD
Sbjct: 663 IATYNVIIQGLGKMGRADLAGAVLDRLTKQGGYLDIVMYNTLINAIGKANRLDAATQLFD 722
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
+K +G+ PD V+YNT+ +
Sbjct: 723 HMKSNGINPDVVSYNTMIE 741
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 46/80 (57%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K S+S+YS + + + G + ++ S+ ++ ++ + ++L L+R+GKFES+L
Sbjct: 89 KHSVSAYSQIFRTVCRTGLLGEVPDLLCSMKEDGVNLDQTMAKILLDSLIRSGKFESALG 148
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+ D +++ G + Y++V
Sbjct: 149 VLDYMEELGDCLNPSLYDSV 168
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M Q G + S +Y+ I L +NG + ++ + + V+ ++++ L R GK
Sbjct: 383 MVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVVLQLCREGK 442
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E ++KL ++++ G T D VT +++
Sbjct: 443 LEEAVKLVEEMETRGFTVDLVTISSL 468
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 34/59 (57%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
+A +++ + E + + + N+++ L RNG+ E+ LF +K+ G DA+T++ V
Sbjct: 375 EACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIV 433
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 45/78 (57%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +YSS + L KNG SL+A+E+ + + K N+ + +++ L + GK +++
Sbjct: 260 NVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETL 319
Query: 68 DKIKQSGLTPDAVTYNTV 85
D++K GL PDA Y +
Sbjct: 320 DRMKLQGLKPDAGLYGKI 337
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y + I L K G + +A E++ + + +V + ++ L + G + ++ LFDK+
Sbjct: 193 TYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKM 252
Query: 71 KQSGLTPDAVTYNTV 85
K+ + P+ TY+++
Sbjct: 253 KKKAIEPNVFTYSSL 267
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 45/78 (57%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +YS + L + GN +A+ +++ + ++ + NVF + ++ L +NG +++L
Sbjct: 225 SVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELL 284
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ + + P+ VTY+T+
Sbjct: 285 EMMVRKRHKPNMVTYSTL 302
>gi|159480198|ref|XP_001698171.1| protein with PPR repeats [Chlamydomonas reinhardtii]
gi|158273669|gb|EDO99456.1| protein with PPR repeats [Chlamydomonas reinhardtii]
Length = 160
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
+Q+ G + ++ ++++ I GK G +AL++ + +E V + ++S RNG+
Sbjct: 36 LQEAGCRPNVVTFNTLIDVYGKTGQWAEALKVLARMKEEVRHRTVITYSALISACERNGQ 95
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+E +L++F ++ + G P+ +TYN++
Sbjct: 96 WELALQMFGQMLREGCNPNIITYNSL 121
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +YS+ I +NG AL+++ + E N+ N +++ L ++E + +F
Sbjct: 79 TVITYSALISACERNGQWELALQMFGQMLREGCNPNIITYNSLITALAAGAQWERAADVF 138
Query: 68 DKIKQSGLTPDAVTYNTV 85
K+++ G PD VTY +
Sbjct: 139 AKLQRQGCEPDVVTYTAL 156
>gi|357113402|ref|XP_003558492.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Brachypodium distachyon]
Length = 688
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 43/75 (57%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS+ I G+ G++ AL +Y+ E +++ IC ++ +G F +L +F+++
Sbjct: 233 TYSAVIDAYGRAGDADMALRLYDRARAEKCQLDPVICATVIKVHSTSGNFAGALNVFEEM 292
Query: 71 KQSGLTPDAVTYNTV 85
K G+ P+ V YNTV
Sbjct: 293 KAVGVKPNLVVYNTV 307
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
+++HG + ++ +Y+ I L K G A +++ + + VN + N++++ L + G
Sbjct: 429 IKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGL 488
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
F+ + L K++ +G+ PDAVTY T+ Q+
Sbjct: 489 FDEAEVLLSKMEDNGIIPDAVTYETIIQA 517
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 37/75 (49%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I L K G A E+ + + + ++ N ++ +N + ++ L KI
Sbjct: 370 TYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKI 429
Query: 71 KQSGLTPDAVTYNTV 85
K+ G+ P+ TYN +
Sbjct: 430 KEHGIQPNMCTYNIL 444
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 47/78 (60%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
SI +Y+S I ++G +A+E+ N + + ++VF +LS VR GK ES++++F
Sbjct: 173 SIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVF 232
Query: 68 DKIKQSGLTPDAVTYNTV 85
+++ +G P+ T+N +
Sbjct: 233 AEMRAAGCKPNICTFNAL 250
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M + G T S+++Y+S + ++ N ++ E+ I + K + N ++ RNG+
Sbjct: 480 MNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGR 539
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+ + ++F ++++SGL PD +TYNT S
Sbjct: 540 MKEASRIFSEMRESGLVPDVITYNTFVAS 568
Score = 41.6 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 37/70 (52%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGL 75
I LGK G A + N + + ++V+ +++ V NG++ ++ +F K+++ G
Sbjct: 5 ISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEEGC 64
Query: 76 TPDAVTYNTV 85
P +TYN +
Sbjct: 65 KPTLITYNVI 74
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 39/77 (50%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ + + G A+ ++ + K N+ N ++ GKF +K+F+
Sbjct: 209 VFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFE 268
Query: 69 KIKQSGLTPDAVTYNTV 85
+IK S PD VT+NT+
Sbjct: 269 EIKNSCCVPDIVTWNTL 285
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK-LF 67
+ +Y+S I NG +A+ ++ + +E K + N+IL+ + G + +K LF
Sbjct: 33 VYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKIKGLF 92
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ +K +G+ PD TYNT+
Sbjct: 93 EGMKNAGVLPDEYTYNTL 110
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 42/80 (52%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K +I ++++ IK G G + ++++ I + ++ N +L+ +NG
Sbjct: 241 KPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSG 300
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F ++K++G P+ TYNT+
Sbjct: 301 VFKEMKRAGFVPERDTYNTL 320
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 39/72 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I + G+ +A++IY + + ++ N +L+ L R G +E S K+F ++
Sbjct: 316 TYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEM 375
Query: 71 KQSGLTPDAVTY 82
K P+ +TY
Sbjct: 376 KDGRCKPNELTY 387
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 39/77 (50%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I ++++ + G+NG + ++ + N ++S R G F+ ++ ++
Sbjct: 279 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYK 338
Query: 69 KIKQSGLTPDAVTYNTV 85
++ ++G+TPD TYN V
Sbjct: 339 RMLEAGITPDLSTYNAV 355
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNG---NSLKALEIYNSITDESDKVNVFICNLILSCLVR 56
M++ G K ++ +Y+ + GK G N +K L + + + + + N +++C R
Sbjct: 59 MEEEGCKPTLITYNVILNVYGKMGMPWNKIKGL--FEGMKNAGVLPDEYTYNTLITCCRR 116
Query: 57 NGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
E + +F +K G PD VTYN +
Sbjct: 117 GSLHEEAAAVFKDMKSMGFVPDKVTYNAL 145
>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
Length = 953
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + L K GN AL++ + + + + + N+ ++CL R GKF + ++
Sbjct: 541 NYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEM 600
Query: 71 KQSGLTPDAVTYNTV 85
+ +GL PD TYNT+
Sbjct: 601 RNTGLEPDQATYNTM 615
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 42/79 (53%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y++ I + GN+ KAL++ N + S K N+ ++ L+ G E + L ++
Sbjct: 610 ATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNE 669
Query: 70 IKQSGLTPDAVTYNTVYQS 88
+ +G TP +TY V Q+
Sbjct: 670 MASAGFTPTPLTYRRVLQA 688
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y + I K AL++Y + E + N FI + +++ L +NG E + LF
Sbjct: 468 NVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALF 527
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ + GL D V Y T+
Sbjct: 528 KDMGERGLLLDHVNYATL 545
>gi|307103654|gb|EFN51912.1| hypothetical protein CHLNCDRAFT_59068 [Chlorella variabilis]
Length = 1025
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 47/81 (58%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
+ + ++Y++ I GKNG +AL+I+ + + NV + ++S + G++E +L
Sbjct: 331 AQPTATTYTALISAYGKNGQLDRALQIFQDMVRRGCERNVITYSSLISACEKAGRWELAL 390
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
+LF ++ G P+ VTYN++
Sbjct: 391 ELFREMHTEGCRPNVVTYNSL 411
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 42/75 (56%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +YSS I K G ALE++ + E + NV N +++ + ++E + ++F
Sbjct: 369 NVITYSSLISACEKAGRWELALELFREMHTEGCRPNVVTYNSLIAACAQGAQWEKAQEMF 428
Query: 68 DKIKQSGLTPDAVTY 82
++++ G PDAVT+
Sbjct: 429 EQMQHRGCKPDAVTF 443
Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLK-ALEIYNSITDESDKVNVFICNLILSCLVRNG 58
M+ G + ++ +YS+ + K GN L AL++Y + E N+ N ++ + G
Sbjct: 221 MRSRGIQCNVHTYSALMNVCIK-GNELDLALDVYRQMLAEGCTPNLVTYNTLIDVYGKTG 279
Query: 59 KFESSLKLFDKIKQSGLTPDAVTYNTV 85
+E ++++ D +++ G+ P+ TYNTV
Sbjct: 280 AWEEAIRVLDALERQGIDPEIRTYNTV 306
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I G +ALE+ + + NV + +++ ++ + + +L ++ ++
Sbjct: 197 TYTTMISQCGTQQQLRRALELVAEMRSRGIQCNVHTYSALMNVCIKGNELDLALDVYRQM 256
Query: 71 KQSGLTPDAVTYNTV 85
G TP+ VTYNT+
Sbjct: 257 LAEGCTPNLVTYNTL 271
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 38/80 (47%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ ++ +Y+S I + KA E++ + K + +++ R G + +L
Sbjct: 402 RPNVVTYNSLIAACAQGAQWEKAQEMFEQMQHRGCKPDAVTFGGLIAAYDRAGHWRRALT 461
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
F+++K PD+V YNT+
Sbjct: 462 AFEQMKAHNCRPDSVVYNTI 481
>gi|414868449|tpg|DAA47006.1| TPA: hypothetical protein ZEAMMB73_127498 [Zea mays]
Length = 870
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +YS+ I K G A +Y + K +V + + + L +NG E +L L
Sbjct: 489 SVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGLVECALSLL 548
Query: 68 DKIKQSGLTPDAVTYNTV 85
D++ + G+ P+ VTYNT+
Sbjct: 549 DEMMKMGIKPNVVTYNTI 566
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y++++ + K GN AL++ + + K NV + ++ + K++ +LKL +
Sbjct: 350 IYTYNTFVDAICKCGNMGLALQVVLDMEANNAKPNVVTYSTLMDGFSKLEKYDEALKLRE 409
Query: 69 KIKQSGLTPDAVTYNTV 85
K+K + D V YNT+
Sbjct: 410 KMKSLRIQLDRVCYNTL 426
>gi|242039913|ref|XP_002467351.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
gi|241921205|gb|EER94349.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
Length = 846
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I L + GN +AL++ ++ +++ N+++ L R GK E L +
Sbjct: 567 TYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLDM 626
Query: 71 KQSGLTPDAVTYNTV 85
+GLTPD VTYNT+
Sbjct: 627 CSNGLTPDTVTYNTI 641
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
++S+YI L + +A + + +T N F N I+S L R G +LKL +
Sbjct: 532 AFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNM 591
Query: 71 KQSGLTPDAVTYNTV 85
+Q+GL PD T N +
Sbjct: 592 RQNGLVPDIYTSNIL 606
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M + G + ++ +Y+ + L G +A +++ + + N N+++ + G+
Sbjct: 280 MHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVLIDGYAKTGR 339
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + + ++K GL PD+ T+N +
Sbjct: 340 MDQACAAYREMKARGLVPDSCTFNII 365
Score = 34.7 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 39/78 (50%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ SY+ IK G S A +++ + + V N+++ L G+ + +LF
Sbjct: 253 NVCSYNILIKGHCVFGWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLF 312
Query: 68 DKIKQSGLTPDAVTYNTV 85
D++ Q G+ + +T+N +
Sbjct: 313 DEMAQVGIQANTITFNVL 330
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ ++ SY++ I L KNGN++ A+ ++ + K NV N I+ L ++ +++
Sbjct: 198 EPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVE 257
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
++ G+ PD VTYNT+
Sbjct: 258 FLSEMVDRGIPPDVVTYNTI 277
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 44/78 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
++++ I L G +A+ ++N + + NV N +++ L +NG ++++F K+
Sbjct: 168 TFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKM 227
Query: 71 KQSGLTPDAVTYNTVYQS 88
+Q+ P+ VTYNT+ S
Sbjct: 228 EQNRGKPNVVTYNTIIDS 245
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +YS + K+G+ +AL++ + + K N+ + +++ + GK E + +LF
Sbjct: 446 LMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFS 505
Query: 69 KIKQSGLTPDAVTYNTV 85
K+ G+ PD TYN +
Sbjct: 506 KLSADGIRPDIWTYNVM 522
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q GK ++ +Y++ I L K+ +A+E + + D +V N IL G+
Sbjct: 229 QNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLN 288
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
+ +LF ++ + PD VT+N +
Sbjct: 289 EATRLFKEMVGRNVMPDTVTFNIL 312
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/82 (21%), Positives = 45/82 (54%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K +I Y+ I+ + G A E+++ ++ + + +++ N+++ L++ G + + +
Sbjct: 478 KPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYE 537
Query: 66 LFDKIKQSGLTPDAVTYNTVYQ 87
F K++ G PD+ +YN + Q
Sbjct: 538 FFRKMEDDGFLPDSCSYNVIIQ 559
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 45/85 (52%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
++ + + S+ + ++ + K A+ + N + NV+ N++++CL R
Sbjct: 88 VRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHV 147
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++ + K+ + G+ PDA+T+NT+
Sbjct: 148 DFAVSVMGKMFKLGIQPDAITFNTL 172
>gi|222637475|gb|EEE67607.1| hypothetical protein OsJ_25160 [Oryza sativa Japonica Group]
Length = 225
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M + G + + Y+ I L K G + KA + + + + NV N++++C+ + G
Sbjct: 90 MSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGS 149
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNT-------VYQSDHITWI 94
+ ++ + K+ + G+ PD VTYNT V + D W+
Sbjct: 150 VKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWL 191
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G + + +Y + I+ L KA+E+ + + + NV + + +L ++G+
Sbjct: 20 MRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGR 79
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+E K+F ++ + G+ PD V Y + S
Sbjct: 80 WEDVGKVFVEMSEKGIEPDVVMYTGLIDS 108
>gi|307104938|gb|EFN53189.1| hypothetical protein CHLNCDRAFT_25863, partial [Chlorella
variabilis]
Length = 166
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G + ++ +Y+ I + G KA E+++S+ + + +++++ R G+
Sbjct: 28 MRREGCRPNVVTYNGLIGACAQAGMWAKAAEVFDSMIGGGVRPDAVTFSVLVAAYERGGQ 87
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ L+ F++++Q G PDA YN V
Sbjct: 88 WRRCLQAFEQMQQQGFRPDACVYNVV 113
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
++SS I ++G AL +++ + E + NV N ++ + G + + ++FD +
Sbjct: 4 TFSSLISACERSGRCDLALRLFDEMRREGCRPNVVTYNGLIGACAQAGMWAKAAEVFDSM 63
Query: 71 KQSGLTPDAVTYNTV 85
G+ PDAVT++ +
Sbjct: 64 IGGGVRPDAVTFSVL 78
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 45/75 (60%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++++ L +NG+ AL++ + + E +VF N +++CL +NG+ + + + +++
Sbjct: 304 TYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQM 363
Query: 71 KQSGLTPDAVTYNTV 85
G PD T+NT+
Sbjct: 364 VDRGCLPDTTTFNTL 378
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
+++++ I L +AL++ +T + +V+ N++++ L + G ++LF++
Sbjct: 373 TTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEE 432
Query: 70 IKQSGLTPDAVTYNTVYQSDHI 91
+K SG TPD VTYN + DH+
Sbjct: 433 MKSSGCTPDEVTYNILI--DHL 452
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 41/78 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S + K GN KA +I ++T +++V +++ L + G+ + +LKL +
Sbjct: 549 TYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGM 608
Query: 71 KQSGLTPDAVTYNTVYQS 88
+ G+ P YN V QS
Sbjct: 609 RIKGIRPTPKAYNPVIQS 626
Score = 38.9 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 40/85 (47%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+Q+ + +Y++ I L KNG +A I N + D + N ++ L +
Sbjct: 329 LQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRL 388
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
E +L L ++ GL+PD T+N +
Sbjct: 389 EEALDLARELTVKGLSPDVYTFNIL 413
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 39/80 (48%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y + I L K G + AL++ + + + N ++ L R +L LF
Sbjct: 582 VVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFR 641
Query: 69 KIKQSGLTPDAVTYNTVYQS 88
++ + G PDA+TY V++S
Sbjct: 642 EMTEVGEPPDALTYKIVFRS 661
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 19 LGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPD 78
+GK GN AL++ N + + N I+ L + + E + ++FD++ G++
Sbjct: 455 MGKLGN---ALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRS 511
Query: 79 AVTYNTV 85
AVT+NT+
Sbjct: 512 AVTFNTL 518
>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 754
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 44/77 (57%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I LG+ G K+ EI+ + +VF +++ R+G++E SL+L +++K
Sbjct: 145 YTIIISLLGREGLLEKSTEIFEEMPTHGVPRSVFSYTALINSYGRHGQYEVSLELLERMK 204
Query: 72 QSGLTPDAVTYNTVYQS 88
+ +TP +TYNTV S
Sbjct: 205 KEKVTPSILTYNTVINS 221
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNG- 58
M HG S+ SY++ I G++G +LE+ + E ++ N +++ R G
Sbjct: 168 MPTHGVPRSVFSYTALINSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVINSCARGGL 227
Query: 59 KFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+E L LF +++ G+ PD +TYNT+ +
Sbjct: 228 NWEGLLSLFAEMRHEGIQPDIITYNTLLNA 257
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 42/80 (52%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S +Y+ I+ G+ + +AL ++N++ + K V N +++ R G ++ S +
Sbjct: 457 STKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYKESEAIM 516
Query: 68 DKIKQSGLTPDAVTYNTVYQ 87
K+ +SG+ D ++N V +
Sbjct: 517 WKMGESGVARDRDSFNGVIE 536
>gi|384249299|gb|EIE22781.1| hypothetical protein COCSUDRAFT_47692 [Coccomyxa subellipsoidea
C-169]
Length = 1226
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 47/85 (55%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+QQ + S+ +YSS I K+G AL ++ ++ + NV N +++ + ++
Sbjct: 303 VQQGCERSVITYSSLISACEKSGEWQLALRFFDECLKDNCRPNVITFNSLITACAQGAQW 362
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
E + +LF+ ++Q G TPD VTY +
Sbjct: 363 EKARELFELMQQQGCTPDVVTYTAL 387
Score = 37.7 bits (86), Expect = 0.96, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 43/85 (50%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
++ + + ++ +++S I + KA E++ + + +V ++S R GK+
Sbjct: 338 LKDNCRPNVITFNSLITACAQGAQWEKARELFELMQQQGCTPDVVTYTALISAYERGGKW 397
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +L+ F ++ G PD++ YN +
Sbjct: 398 QLALQAFQAMQAKGCKPDSIVYNAI 422
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 43/76 (56%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
+SY++ I K G+ + L+ Y + + + +V + ++S ++G+++ +L+ FD+
Sbjct: 277 TSYNALISAHSKAGDLPQVLDTYRQMVQQGCERSVITYSSLISACEKSGEWQLALRFFDE 336
Query: 70 IKQSGLTPDAVTYNTV 85
+ P+ +T+N++
Sbjct: 337 CLKDNCRPNVITFNSL 352
>gi|297839849|ref|XP_002887806.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333647|gb|EFH64065.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 541
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SYS I K GN +L +Y+ + + + N +L L R F ++KL +K+
Sbjct: 290 SYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIVVYNSLLYVLTRENCFHEAMKLLEKM 349
Query: 71 KQSGLTPDAVTYNTV 85
+ GL P +VTYN++
Sbjct: 350 DEEGLKPGSVTYNSM 364
>gi|302822703|ref|XP_002993008.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
gi|300139208|gb|EFJ05954.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
Length = 431
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G T + +Y+ I+ K GN KA E++ + NV NL++ LV+ G+
Sbjct: 285 MRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGR 344
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
++ + ++ +K+ G+ PDA+T + Q
Sbjct: 345 YQDARDIYFDMKKKGILPDAITATVLQQ 372
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+ +S I + + G + A EI+ + VN N +L C + GK + + D++
Sbjct: 191 TLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEM 250
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ P+++T+NT+
Sbjct: 251 EARGIKPNSITFNTL 265
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G T S +Y++ I K G A+ + + D++ + + N +++ + R G+
Sbjct: 145 MEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGR 204
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E + ++F+++K+SG+ + V++N +
Sbjct: 205 TELACEIFERMKKSGVAVNTVSFNAM 230
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 35/73 (47%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
++ I G++ K ++ + + K N + ++ LV+ G ++ DK+ +
Sbjct: 18 NAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMDFLDKMIK 77
Query: 73 SGLTPDAVTYNTV 85
+GL PD + YN V
Sbjct: 78 TGLEPDTLLYNVV 90
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 38/78 (48%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
S+++ + GK G A + + + K N N +++CL R + K+ ++
Sbjct: 226 SFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEM 285
Query: 71 KQSGLTPDAVTYNTVYQS 88
+ +GLTPD TY + ++
Sbjct: 286 RSAGLTPDVFTYTCMIEA 303
Score = 34.7 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
+ +HG K + +Y I+ L K GN + A++ + + + + + N++L L +
Sbjct: 40 LDKHGSKPNAYTYKCVIQSLVKAGNVVLAMDFLDKMIKTGLEPDTLLYNVVLDGLGKANM 99
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+ + KLF +K G D TY + +S
Sbjct: 100 IDEACKLFASMKSMGCPADDYTYAILIRS 128
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
K + + ALE Y I D NV+ N++++ L + GK + + +FD+I+++GL P AV
Sbjct: 209 KMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAV 268
Query: 81 TYNTV 85
++NT+
Sbjct: 269 SFNTL 273
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
++++ I KNG ALEIY + + K ++ + N ++ L + G F + K ++
Sbjct: 339 TFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEM 398
Query: 71 KQSGLTPDAVTYNTV 85
+ GL PD TY T+
Sbjct: 399 TKRGLIPDKFTYTTL 413
>gi|302806226|ref|XP_002984863.1| hypothetical protein SELMODRAFT_121207 [Selaginella moellendorffii]
gi|300147449|gb|EFJ14113.1| hypothetical protein SELMODRAFT_121207 [Selaginella moellendorffii]
Length = 564
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ G + +YS I LGK G A +++ +TD ++ N+I+ + GK
Sbjct: 163 MQHAGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGK 222
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
F+ +LKL+ +++ G PD VTY + +
Sbjct: 223 FDMALKLYSDLQEVGYAPDRVTYGIIME 250
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDK----VNVFICNLILSCLVRNGKFE 61
K + +Y++ + LG+ K+ ++ N++ DE + NV N ++ C R +
Sbjct: 64 KHDVHTYTTILGILGR----AKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLD 119
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
SSLKLF+ ++ G PD VTY T+
Sbjct: 120 SSLKLFNVMQMVGCEPDRVTYCTL 143
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y + I K G A+++Y + + + F ++I+ CL + GK ++ KLF ++
Sbjct: 139 TYCTLIDLQAKAGFHDAAMDLYRQMQHAGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEM 198
Query: 71 KQSGLTPDAVTYNTV 85
G P VTYN +
Sbjct: 199 TDRGYAPSLVTYNII 213
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 39/73 (53%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGL 75
+ GK GN+ KA + +N + D + NV CN +LS +R+ ++++ + + + GL
Sbjct: 284 VDMWGKTGNAEKAAQWFNRMLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGGMAKWGL 343
Query: 76 TPDAVTYNTVYQS 88
P TY ++ S
Sbjct: 344 YPTLQTYTSLLSS 356
>gi|302808451|ref|XP_002985920.1| hypothetical protein SELMODRAFT_123132 [Selaginella moellendorffii]
gi|300146427|gb|EFJ13097.1| hypothetical protein SELMODRAFT_123132 [Selaginella moellendorffii]
Length = 574
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ G + +YS I LGK G A +++ +TD ++ N+I+ + GK
Sbjct: 163 MQHAGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGK 222
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
F+ +LKL+ +++ G PD VTY + +
Sbjct: 223 FDMALKLYSDLQEVGYAPDRVTYGIIME 250
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y + I K G A+E+Y + + + F ++I+ CL + GK ++ KLF ++
Sbjct: 139 TYCTLIDLQAKAGFHDAAMELYRQMQHAGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEM 198
Query: 71 KQSGLTPDAVTYNTV 85
G P VTYN +
Sbjct: 199 TDRGYAPSLVTYNII 213
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDK----VNVFICNLILSCLVRNGKFE 61
K + +Y++ + LG+ K+ ++ N++ DE + NV N ++ C R +
Sbjct: 64 KHDVHTYTTILGILGR----AKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLD 119
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
SSLKLF+ ++ G PD VTY T+
Sbjct: 120 SSLKLFNVMQMVGCEPDRVTYCTL 143
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 39/73 (53%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGL 75
+ GK GN+ KA + +N + D + NV CN +LS +R+ ++++ + + + GL
Sbjct: 284 VDMWGKTGNAEKAAQWFNRMLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGGMAKWGL 343
Query: 76 TPDAVTYNTVYQS 88
P TY ++ S
Sbjct: 344 YPTLQTYTSLLSS 356
>gi|413939497|gb|AFW74048.1| hypothetical protein ZEAMMB73_972326 [Zea mays]
Length = 576
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 1 MQQHGKTSISSY--SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNG 58
M Q+G S ++ +S++ K+G A++++ ITDE V +F N ++ L +G
Sbjct: 361 MNQNGLVSRNARVATSFVHIYAKHGCIQTAMDVFRGITDEFKTVELF--NAMIHGLAHHG 418
Query: 59 KFESSLKLFDKIKQSGLTPDAVTY 82
E ++ LFDK++ GL PD +T+
Sbjct: 419 YGEKAISLFDKMESLGLQPDDITF 442
>gi|242062936|ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
gi|241932588|gb|EES05733.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
Length = 502
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M + G T SI++Y++ I+ K GN A+ +++ + + NV +++ L GK
Sbjct: 311 MSREGCTPSIATYNALIQVTCKKGNVEDAVAVFDDMIRKGYIPNVVTYTVLIRGLCHAGK 370
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++KL DK+K+ G P+ TYN +
Sbjct: 371 IDRAMKLLDKMKREGCEPNVQTYNVL 396
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 41/80 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + SY++ + LG G KA ++++ ++ E ++ N ++ + G E ++
Sbjct: 282 KPDVVSYTTVLHGLGVAGQLDKARKVFDEMSREGCTPSIATYNALIQVTCKKGNVEDAVA 341
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+FD + + G P+ VTY +
Sbjct: 342 VFDDMIRKGYIPNVVTYTVL 361
Score = 34.3 bits (77), Expect = 8.7, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 37 DESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
DE+ K +V +L L G+ + + K+FD++ + G TP TYN + Q
Sbjct: 278 DENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSREGCTPSIATYNALIQ 328
>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
Length = 719
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 45/75 (60%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + K+G+ +A E+YN + ++ CN I+S L GK + + ++F K+
Sbjct: 370 TYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKM 429
Query: 71 KQSGLTPDAVTYNTV 85
++G+ DA+TYN++
Sbjct: 430 SETGIQADAITYNSL 444
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 37/65 (56%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
K+G+ E+YN ++ CN I+S L GK + + ++F K+ ++G+ DA+
Sbjct: 520 KSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAI 579
Query: 81 TYNTV 85
TYN++
Sbjct: 580 TYNSL 584
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I +Y I L KN L+A ++N + D + + ++ L G F + KL+
Sbjct: 297 TIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLW 356
Query: 68 DKIKQSGLTPDAVTYNTV 85
++ G+ P+A TYNT+
Sbjct: 357 FEMMDKGMQPNAYTYNTM 374
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I+ K G + + + N + + + +V + L++ ++G FE++ +L +
Sbjct: 440 TYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDM 499
Query: 71 KQSGLTPDAVTYNTV 85
GL P+A TY+T+
Sbjct: 500 SSKGLHPNAYTYDTM 514
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 39/72 (54%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
+S Y+K L G +A+E+Y + + ++++ CN ILS ++ GK E + + +
Sbjct: 157 ASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQE 216
Query: 70 IKQSGLTPDAVT 81
+ ++G DA T
Sbjct: 217 MIKAGTASDANT 228
Score = 34.3 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 39/79 (49%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
T+ ++ + I L G S +A E++ +++ K + N ++ + GK S+ L
Sbjct: 541 TTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNL 600
Query: 67 FDKIKQSGLTPDAVTYNTV 85
+++ GL P A +Y ++
Sbjct: 601 LNELVAQGLQPSASSYASL 619
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I LG+ G K E+++ + V++ +++ RNG+F +SL+L + +K
Sbjct: 139 YTIMITLLGREGLLDKCREVFDEMPSNGVARTVYVYTAVINAYGRNGQFHASLELLNGMK 198
Query: 72 QSGLTPDAVTYNTV 85
Q ++P +TYNTV
Sbjct: 199 QERVSPSILTYNTV 212
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNG-KFESSLKL 66
++ Y++ I G+NG +LE+ N + E ++ N +++ R G +E L L
Sbjct: 170 TVYVYTAVINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGL 229
Query: 67 FDKIKQSGLTPDAVTYNTV 85
F +++ G+ PD +TYNT+
Sbjct: 230 FAEMRHEGIQPDVITYNTL 248
Score = 34.7 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 43/79 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I+SY+ ++ + G+ +A++++ + N +++L+ ++G+++ +F
Sbjct: 312 ITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFL 371
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++K S PDA TYN + Q
Sbjct: 372 EMKVSNTDPDAGTYNILIQ 390
>gi|326513138|dbj|BAK06809.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G + +YS I+ GK+ A ++ + E NV N++L CL R+GK
Sbjct: 524 MQEKGYGPDVFTYSILIECFGKSNKVDMACNLFLDMIAEGCIPNVVTYNILLDCLERHGK 583
Query: 60 FESSLKLFDKIKQSGLTPDAVT 81
+ K ++ +KQ GLTPD++T
Sbjct: 584 TAEAHKHYETMKQQGLTPDSIT 605
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 44/80 (55%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y+S I LGKNG+ +A ++ + ++ +VF ++++ C ++ K + +
Sbjct: 495 KPDVITYNSLINCLGKNGDLDEAHMLFKEMQEKGYGPDVFTYSILIECFGKSNKVDMACN 554
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LF + G P+ VTYN +
Sbjct: 555 LFLDMIAEGCIPNVVTYNIL 574
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
++ S ++ L +G +L+A+++ + + ++ +V + N++ S L + + LFDK+
Sbjct: 395 AFVSMLEVLCNSGKTLEAIDLLHMMPEKGVATDVGMYNMVFSALGKLKQVSFITSLFDKM 454
Query: 71 KQSGLTPDAVTYNTVYQS 88
K +G+ PD TYN + S
Sbjct: 455 KANGIAPDLFTYNIMISS 472
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 41/77 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I G+ G KA ++ + S K +V N +++CL +NG + + LF ++
Sbjct: 465 TYNIMISSYGRVGLVDKASGLFEDMNASSCKPDVITYNSLINCLGKNGDLDEAHMLFKEM 524
Query: 71 KQSGLTPDAVTYNTVYQ 87
++ G PD TY+ + +
Sbjct: 525 QEKGYGPDVFTYSILIE 541
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 32/56 (57%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTY 82
K E+Y + + +++F N++L L ++G + + ++F+ +KQ PDA TY
Sbjct: 204 KGFEVYEEMRRKGYMLDIFGYNMLLDALAKSGMVDQAYQVFEDMKQKYCEPDAYTY 259
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESD-KVNVFICNLILSCLVRNGKFESSLKL 66
++++Y + I NGN +A+EI+ + S N I N++++ L +N K +S++ L
Sbjct: 628 TVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSL 687
Query: 67 FDKIKQSGLTPDAVTYNTVYQ 87
+ +K G+TP+ TYN +++
Sbjct: 688 MEDMKIWGVTPNTTTYNAIFK 708
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 37/75 (49%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I K G K E+++ + E NV N ++ + R G+ S++ F +
Sbjct: 421 TYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEA 480
Query: 71 KQSGLTPDAVTYNTV 85
++ G+ DAVTY +
Sbjct: 481 QRRGMKGDAVTYTAL 495
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS+ I K G +A+E++ K +V + + ++ L +NG ES++ D++
Sbjct: 468 TYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEM 527
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ P+ VTYN++
Sbjct: 528 TKEGIRPNVVTYNSI 542
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 47/84 (55%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
++H ++ +YS+ I K G +AL ++N + S ++ N +LS + G+FE
Sbjct: 354 RKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFE 413
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
+L + +++ SG+ DAVTYN +
Sbjct: 414 EALNVCKEMESSGIKKDAVTYNAL 437
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
S+ I LG+ G A ++ + +E V+ + ++S R+G + ++K+F+ +K
Sbjct: 189 SAMISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKS 248
Query: 73 SGLTPDAVTYNTV 85
SGL P+ VTYN V
Sbjct: 249 SGLKPNLVTYNAV 261
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSL-KALEIYNSITDESDKVNVFICNLILSCLVRNG 58
M+ G K ++ +Y++ I GK G +A EI++ + + + N +L+ R G
Sbjct: 246 MKSSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGG 305
Query: 59 KFESSLKLFDKIKQSGLTPDAVTYNTV 85
+E++ LF ++ G+ D TYNT+
Sbjct: 306 LWEAARNLFSEMLYRGIEQDIFTYNTL 332
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ + K G +AL + + K + N +L + GK+E ++F+++
Sbjct: 398 SYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEM 457
Query: 71 KQSGLTPDAVTYNTV 85
K + P+ +TY+T+
Sbjct: 458 KAERIFPNLLTYSTL 472
>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 632
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 47/83 (56%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + +Y+ I+ LGK G +A Y+ + E K + + N +++ L + G+ + LK
Sbjct: 297 RPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLK 356
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
LF+++ S P+ VTYNT+ ++
Sbjct: 357 LFEEMGVSHCIPNVVTYNTIIKA 379
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+HG I+SY+ + L K G +A+E+ ++ + + K + N +LS L G
Sbjct: 537 MQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGM 596
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
FE + +L ++ G D +TY+++ ++
Sbjct: 597 FEEAAELMKEMNALGFEYDLITYSSILEA 625
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 41/81 (50%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
G +S Y+ IK LGK G A+ +++ ++ NV+ N ++S L R + +L
Sbjct: 472 GSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEAL 531
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
K+++ G PD +YN +
Sbjct: 532 TTMRKMQEHGCLPDINSYNII 552
Score = 37.7 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 39/76 (51%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y S I LGK A E++ + + + + +++ L + G+ + ++ LFD+
Sbjct: 442 AAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDE 501
Query: 70 IKQSGLTPDAVTYNTV 85
+ + G TP+ YN +
Sbjct: 502 MSKLGCTPNVYAYNAL 517
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESD-KVNVFICNLILSCLVRNGKFESSL 64
+ + +Y+S I L G K E+YN +++E + + ++S + G+ +S++
Sbjct: 191 QPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVTYSALISAFCKLGRQDSAI 250
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
+L +++K++G+ P A Y +
Sbjct: 251 RLLNEMKENGMQPTAKIYTMI 271
>gi|255543335|ref|XP_002512730.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547741|gb|EEF49233.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 552
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 41/76 (53%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
+SY+ I K GN +L +Y+ + + + N ++ L R F+ +L+ DK
Sbjct: 295 TSYTHMISCFSKVGNLFDSLRLYDEMKKRGWLPGMEVYNSLIYVLTRENCFKEALRFLDK 354
Query: 70 IKQSGLTPDAVTYNTV 85
+K+ GL PD+ TYN++
Sbjct: 355 MKEVGLQPDSTTYNSM 370
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 47/83 (56%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + +Y+ I+ LGK G +A Y+ + E K + + N +++ L + G+ + LK
Sbjct: 297 RPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLK 356
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
LF+++ S P+ VTYNT+ ++
Sbjct: 357 LFEEMGVSHCIPNVVTYNTIIKA 379
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+HG I+SY+ + L K G +A+E+ ++ + + K + N +LS L G
Sbjct: 537 MQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGM 596
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
FE + +L ++ G D +TY+++ ++
Sbjct: 597 FEEAAELMKEMNALGFEYDLITYSSILEA 625
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 41/81 (50%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
G +S Y+ IK LGK G A+ +++ ++ NV+ N ++S L R + +L
Sbjct: 472 GSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEAL 531
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
K+++ G PD +YN +
Sbjct: 532 TTMRKMQEHGCLPDINSYNII 552
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESD-KVNVFICNLILSCLVRNGKFESSL 64
+ + +Y+S I L G K E+YN +++E + + + ++S + G+ +S++
Sbjct: 191 QPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAI 250
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
+L +++K++G+ P A Y +
Sbjct: 251 RLLNEMKENGMQPTAKIYTMI 271
Score = 37.7 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 39/76 (51%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y S I LGK A E++ + + + + +++ L + G+ + ++ LFD+
Sbjct: 442 AAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDE 501
Query: 70 IKQSGLTPDAVTYNTV 85
+ + G TP+ YN +
Sbjct: 502 MSKLGCTPNVYAYNAL 517
>gi|297743996|emb|CBI36966.3| unnamed protein product [Vitis vinifera]
Length = 730
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS+ I K G +A+E++ K +V + + ++ L +NG ES++ D++
Sbjct: 354 TYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEM 413
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ P+ VTYN++
Sbjct: 414 TKEGIRPNVVTYNSI 428
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 47/84 (55%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
++H ++ +YS+ I K G +AL ++N + S ++ N +LS + G+FE
Sbjct: 240 RKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFE 299
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
+L + +++ SG+ DAVTYN +
Sbjct: 300 EALNVCKEMESSGIKKDAVTYNAL 323
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ + K G +AL + + K + N +L + GK+E ++F+++
Sbjct: 284 SYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEM 343
Query: 71 KQSGLTPDAVTYNTV 85
K + P+ +TY+T+
Sbjct: 344 KAERIFPNLLTYSTL 358
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 46/75 (61%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y++ I L KNG++ ALE++N + ++ N+ + ++ L + GK E + LF
Sbjct: 599 NVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLF 658
Query: 68 DKIKQSGLTPDAVTY 82
++++ GL PD +TY
Sbjct: 659 AELERHGLIPDEITY 673
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
+ Q G + + +YS+ + L + G + ++ Y+ + E + N+ I N +++ L ++G
Sbjct: 171 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGN 230
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + K+ +S ++PD TY ++
Sbjct: 231 VADAETIMKKVFESEMSPDTFTYTSM 256
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTS-ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M Q G ++ + +Y++ IK +GN+ AL I + + D K + + ++ + K
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
ES+ LF+++ GL P+ VTY +
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTAL 536
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G + ++ +Y+ I L K N A E+ + +E NV ++ L +NG
Sbjct: 556 MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGS 615
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+L++F+K+ + G P+ +TY+++ ++
Sbjct: 616 TSLALEMFNKMIEQGCLPNLLTYSSLIRA 644
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 46/75 (61%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y++ I L KNG++ ALE++N + ++ N+ + ++ L + GK E + LF
Sbjct: 599 NVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLF 658
Query: 68 DKIKQSGLTPDAVTY 82
++++ GL PD +TY
Sbjct: 659 AELERHGLIPDEITY 673
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
+ Q G + + +YS+ + L + G + ++ Y+ + E + N+ I N +++ L ++G
Sbjct: 171 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGN 230
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + K+ +S ++PD TY ++
Sbjct: 231 VADAETIMKKVFESEMSPDTFTYTSM 256
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTS-ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M Q G ++ + +Y++ IK +GN+ AL I + + D K + + ++ + K
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
ES+ LF+++ GL P+ VTY +
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTAL 536
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G + ++ +Y+ I L K N A E+ + +E NV ++ L +NG
Sbjct: 556 MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGS 615
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+L++F+K+ + G P+ +TY+++ ++
Sbjct: 616 TSLALEMFNKMIEQGCLPNLLTYSSLIRA 644
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 46/75 (61%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y++ I L KNG++ ALE++N + ++ N+ + ++ L + GK E + LF
Sbjct: 599 NVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLF 658
Query: 68 DKIKQSGLTPDAVTY 82
++++ GL PD +TY
Sbjct: 659 AELERHGLIPDEITY 673
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
+ Q G + + +YS+ + L + G + ++ Y+ + E + N+ I N +++ L ++G
Sbjct: 171 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGN 230
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + K+ +S ++PD TY ++
Sbjct: 231 VADAETIMKKVFESEMSPDTFTYTSM 256
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTS-ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M Q G ++ + +Y++ IK +GN+ AL I + + D K + + ++ + K
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
ES+ LF+++ GL P+ VTY +
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTAL 536
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G + ++ +Y+ I L K N A E+ + +E NV ++ L +NG
Sbjct: 556 MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGS 615
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+L++F+K+ + G P+ +TY+++ ++
Sbjct: 616 TSLALEMFNKMIEQGCLPNLLTYSSLIRA 644
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 46/75 (61%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y++ I L KNG++ ALE++N + ++ N+ + ++ L + GK E + LF
Sbjct: 769 NVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLF 828
Query: 68 DKIKQSGLTPDAVTY 82
++++ GL PD +TY
Sbjct: 829 AELERHGLIPDEITY 843
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
+ Q G + + +YS+ + L + G + ++ Y+ + E + N+ I N +++ L ++G
Sbjct: 341 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGN 400
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + K+ +S ++PD TY ++
Sbjct: 401 VADAETIMKKVFESEMSPDTFTYTSM 426
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTS-ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M Q G ++ + +Y++ IK +GN+ AL I + + D K + + ++ + K
Sbjct: 621 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 680
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
ES+ LF+++ GL P+ VTY +
Sbjct: 681 MESAFGLFNEMVDDGLCPNEVTYTAL 706
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G + ++ +Y+ I L K N A E+ + +E NV ++ L +NG
Sbjct: 726 MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGS 785
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+L++F+K+ + G P+ +TY+++ ++
Sbjct: 786 TSLALEMFNKMIEQGCLPNLLTYSSLIRA 814
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ I L K G + +ALE+ N + + + ++ + I S L R G+ E ++K F K+
Sbjct: 399 SYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKV 458
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ P+ V YN +
Sbjct: 459 QDMGIRPNTVLYNAI 473
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 43/77 (55%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I SY++ + L + G A+E+ + + D+ + N ++ L + GK E +L+L +
Sbjct: 362 IVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLN 421
Query: 69 KIKQSGLTPDAVTYNTV 85
++ GL PD +TY+T+
Sbjct: 422 EMVTKGLQPDIITYSTI 438
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 30/46 (65%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
NV N+++S L R G E ++++ D+I + G TP++++YN + +
Sbjct: 291 NVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHA 336
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I+ L G + AL + + + +V ++L + ++ ++KL D++
Sbjct: 154 TYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEM 213
Query: 71 KQSGLTPDAVTYNTV 85
+ G PD VTYN V
Sbjct: 214 RDKGCAPDIVTYNVV 228
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M + G+ ++ +++ I FL + G A+EI + I N N IL + K
Sbjct: 283 MSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKK 342
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++ + + SG PD V+YNT+
Sbjct: 343 MDRAMAFVELMVSSGCYPDIVSYNTL 368
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 42/77 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
++ I+F + G +A+++ +T+ N +CN++++ + + G+ + + KL + +
Sbjct: 285 TFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDM 344
Query: 71 KQSGLTPDAVTYNTVYQ 87
G PD ++Y TV +
Sbjct: 345 GSYGCNPDTISYTTVLK 361
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I+ L G AL + + + + NV ++L + RN FE ++ + D++
Sbjct: 145 TYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEM 204
Query: 71 KQSGLTPDAVTYNTV 85
+ G TP+ VTYN +
Sbjct: 205 RAKGCTPNIVTYNVI 219
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M +HG T ++ +Y++ + + K+ +S ALE+ + + + +V + I+ L + +
Sbjct: 516 MMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDR 575
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E +++LF ++ G+ P AV YN +
Sbjct: 576 IEEAVQLFHVVQDIGMRPKAVVYNKI 601
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 45/82 (54%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ ++ +Y+ ++ + +N +A+ + + + + N+ N+I++ + R G+ + + +
Sbjct: 175 QPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARE 234
Query: 66 LFDKIKQSGLTPDAVTYNTVYQ 87
L +++ G PD V+Y T+ +
Sbjct: 235 LLNRLPSYGFQPDTVSYTTLLK 256
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 28/43 (65%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
NV N+++S + G E +++L +++ + G TP+ +TYNT+
Sbjct: 489 NVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTL 531
Score = 34.3 bits (77), Expect = 9.1, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 41/78 (52%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +++ + F + G +A+E+ + + N+ N +L + ++ E +L+L
Sbjct: 489 NVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELL 548
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ G++PD +T++++
Sbjct: 549 HGLVSKGVSPDVITFSSI 566
>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
Length = 866
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNG- 58
M HG + S+ SY++ I G+NG +LE+ + E ++ N +++ R G
Sbjct: 169 MGAHGVSRSVFSYTALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTVINSCARGGL 228
Query: 59 KFESSLKLFDKIKQSGLTPDAVTYNTV 85
+E L LF +++ G+ PD VTYNT+
Sbjct: 229 DWEGLLGLFAEMRHEGIQPDIVTYNTL 255
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 43/77 (55%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I LG+ G K +I+ + +VF +++ RNGK+E SL+L +++K
Sbjct: 146 YTIMISLLGREGLLEKCSDIFEEMGAHGVSRSVFSYTALINSYGRNGKYEVSLELLERMK 205
Query: 72 QSGLTPDAVTYNTVYQS 88
+ ++P +TYNTV S
Sbjct: 206 KERVSPSILTYNTVINS 222
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
ISSY+ ++ + GN A ++ + + N +++L ++G+++ +LF
Sbjct: 319 ISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFL 378
Query: 69 KIKQSGLTPDAVTYNTV 85
++K S PDA TYNT+
Sbjct: 379 EMKVSNTEPDAATYNTL 395
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 45/78 (57%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
SI++ +S + L K G A EIY + +VNV+ N++++ L +N K E++
Sbjct: 61 SINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFL 120
Query: 68 DKIKQSGLTPDAVTYNTV 85
+++ G+ PD VTYNT+
Sbjct: 121 SDMEEKGVFPDVVTYNTL 138
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
S+S+ I L KNG +AL+ + + + + I +++ RNG +LK+ D++
Sbjct: 239 SFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEM 298
Query: 71 KQSGLTPDAVTYNTV 85
+ G D VTYNT+
Sbjct: 299 LEQGCVLDVVTYNTI 313
Score = 41.6 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 44/77 (57%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ I + G +A E+ +S++ + K VF N I++ L + GK+ + + D
Sbjct: 132 VVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLD 191
Query: 69 KIKQSGLTPDAVTYNTV 85
++ + G++PD TYN +
Sbjct: 192 EMLKIGMSPDTATYNIL 208
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 44/80 (55%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ +I + ++ +K + GN++KA E +++ + + N +++ ++ + +
Sbjct: 444 EATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFA 503
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L +K++ SGL PD +TYN +
Sbjct: 504 LVNKMENSGLLPDVITYNVI 523
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 43/85 (50%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
++Q + +Y++ + L K +A E++ +T+ + + +++ ++G
Sbjct: 299 LEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNM 358
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
++ LF+ + Q L PD VTYNT+
Sbjct: 359 NKAVTLFEMMIQRNLKPDVVTYNTL 383
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 34/65 (52%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
+N N + A I++ + + ++ + ++ L +NG + +LK F +K +GL PD V
Sbjct: 214 RNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNV 273
Query: 81 TYNTV 85
Y +
Sbjct: 274 IYTIL 278
>gi|159465707|ref|XP_001691064.1| predicted mitochondrial protein [Chlamydomonas reinhardtii]
gi|158279750|gb|EDP05510.1| predicted mitochondrial protein [Chlamydomonas reinhardtii]
Length = 630
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 47/85 (55%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
++Q+ + S+ +YSS I K G AL I+N + ++ N N +++ + G++
Sbjct: 235 LRQNMERSVITYSSLISACEKAGQWETALRIFNEMQQDNCVPNTVTYNSLVTACAQGGQW 294
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
E + ++F+++ G TPD VTY +
Sbjct: 295 EKATEVFEQMTAHGCTPDVVTYTAL 319
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 48/76 (63%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y++ I GK KALE+Y + ++ + +V + ++S + G++E++L++F++
Sbjct: 209 TTYNALISAYGKTMQLGKALEVYQEMLRQNMERSVITYSSLISACEKAGQWETALRIFNE 268
Query: 70 IKQSGLTPDAVTYNTV 85
++Q P+ VTYN++
Sbjct: 269 MQQDNCVPNTVTYNSL 284
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S + + G KA E++ +T +V ++S R G+++ +L+ F K+
Sbjct: 280 TYNSLVTACAQGGQWEKATEVFEQMTAHGCTPDVVTYTALISAYERGGQWQKALQAFGKM 339
Query: 71 KQSGLTPDAVTYNTV 85
G PDA+ YN +
Sbjct: 340 CMQGCKPDAIVYNAI 354
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 47/84 (55%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q++ + ++ ++++ + K G ALEIYN++ + NV N ++ + G++E
Sbjct: 96 QRNIERNVHTFTALMNVCIKCGKLPLALEIYNNMRAANCMPNVVTYNTLVDVYGKLGRWE 155
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
++ + D +KQ G+ P TYNT+
Sbjct: 156 RAIHVLDLMKQEGVEPVLRTYNTL 179
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 43/77 (55%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ SY++ I + + +A+E+ N + + + NV +++ ++ GK +L++++
Sbjct: 68 VYSYTATISLCIYSQDVDRAMELMNEMRQRNIERNVHTFTALMNVCIKCGKLPLALEIYN 127
Query: 69 KIKQSGLTPDAVTYNTV 85
++ + P+ VTYNT+
Sbjct: 128 NMRAANCMPNVVTYNTL 144
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ ++S+ I L + G KALE++ S+ + K N + ++S L R K + +LF
Sbjct: 254 NVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELF 313
Query: 68 DKIKQSGLTPDAVTYNTV 85
+K+ Q+ + PDAV YN++
Sbjct: 314 EKMTQACIPPDAVAYNSL 331
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 19 LGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPD 78
L + G A E + + + NV + N++L L +G+ E + LF ++K +PD
Sbjct: 160 LCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPD 219
Query: 79 AVTYNTV 85
VTYNT+
Sbjct: 220 VVTYNTL 226
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 37 DESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
D++ NVF + I+ LV+ K E S K+ +++ +G PD +N V Q
Sbjct: 3 DKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQ 53
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M +HG + ++ Y+ + L +G +A ++ + S +V N +L + + +
Sbjct: 176 MPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARR 235
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E KLF+ ++ +G P+ +T++T+
Sbjct: 236 VEEGCKLFEAMRAAGYVPNVITFSTL 261
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 39/78 (50%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +YSS IK L K ++ ++ + +VF N ++ R+ E + +++
Sbjct: 9 NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVY 68
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ +SG PD V+Y+ +
Sbjct: 69 QHMVESGYKPDNVSYHIL 86
Score = 34.3 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 42/80 (52%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +++ ++ ++ N KA E+Y + + K + ++++ L + GK + SLK+
Sbjct: 45 VFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILS 104
Query: 69 KIKQSGLTPDAVTYNTVYQS 88
++ G TP Y+++ ++
Sbjct: 105 EMVMRGQTPSMQAYSSLVRA 124
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 43/65 (66%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
K G +++ALE ++ + S +V+I N+++ L ++G + ++KLF+ ++ S + P+ V
Sbjct: 74 KAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIV 133
Query: 81 TYNTV 85
TYNTV
Sbjct: 134 TYNTV 138
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 40/80 (50%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+T + YSS + + GN KA EI + + +F N++L L+++G ++
Sbjct: 373 RTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVS 432
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L + G PD VTYNT+
Sbjct: 433 LISDLVARGYVPDVVTYNTL 452
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 31/46 (67%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+V CN+++S + ++G E +L++ D +K +G PD +TYN++ +
Sbjct: 203 DVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHA 248
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKV--NVFICNLILSCLVRNGKFESS 63
K I +Y++ I L K+GN KA E+ + + K ++ N +++ R + +
Sbjct: 129 KPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREA 188
Query: 64 LKLFDKIKQSGLTPDAVTYNTV 85
+K+K +G+ PD +T N +
Sbjct: 189 CAFREKMKAAGINPDVLTCNIL 210
>gi|413934354|gb|AFW68905.1| hypothetical protein ZEAMMB73_510949 [Zea mays]
Length = 845
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I L K GN +AL++ ++ +++ N+++ L R GK + L +
Sbjct: 566 TYNSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDNLLLDM 625
Query: 71 KQSGLTPDAVTYNTV 85
+GLTPD VTYNT+
Sbjct: 626 CSNGLTPDTVTYNTI 640
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 39/80 (48%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+T ++S+YI L + +A + + +T N N I+S L + G +LK
Sbjct: 526 QTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRGIVPNNITYNSIISALCKAGNMTEALK 585
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L ++QSGL PD T N +
Sbjct: 586 LVQNMRQSGLVPDIYTSNIL 605
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M + G + ++ +Y+ + L G +A +++ + +VN N+++ ++G+
Sbjct: 279 MHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQVNTITFNVLIDGYAKSGQ 338
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQSDH 90
+ + + +++ GL PD+ T+N + H
Sbjct: 339 MDQASAAYREMQARGLVPDSCTFNIIAARAH 369
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G + +I +Y+S I LGK+G+ KA ++ +T E + N ++ L R+G+
Sbjct: 185 MKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGR 244
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+++ KLF ++ GL PD VT+ ++
Sbjct: 245 ADAAAKLFREMLSKGLQPDHVTFTSL 270
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 43/75 (57%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+++S + LG G + +A I+ D ++V + N+++ L ++ + + + ++F ++
Sbjct: 266 TFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGEL 325
Query: 71 KQSGLTPDAVTYNTV 85
++ GL PD T+N +
Sbjct: 326 EEDGLVPDVYTFNAL 340
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 43/78 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+ S+Y+S I K G + KAL +Y + + + + N++++ + + +S KLF
Sbjct: 88 TASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLF 147
Query: 68 DKIKQSGLTPDAVTYNTV 85
++++ +P+ +TY+ +
Sbjct: 148 EEMQNQNCSPNVITYSIL 165
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
++ Y+ I L K+ +A EI+ + ++ +V+ N ++ L ++G+ + L
Sbjct: 299 VNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLG 358
Query: 69 KIKQSGLTPDAVTYNTV 85
+K++G TPD YNT+
Sbjct: 359 DMKRAGCTPDVTVYNTL 375
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 42/83 (50%)
Query: 3 QHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFES 62
Q+ ++ +YS I + K G KAL+++ + + N+F ++ L ++G +
Sbjct: 153 QNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDK 212
Query: 63 SLKLFDKIKQSGLTPDAVTYNTV 85
+ LF+++ GL V YN++
Sbjct: 213 AFFLFEEMTSEGLVATRVVYNSL 235
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ G + + +Y++ I K G AL ++ I+ + N N IL+ L G+
Sbjct: 395 MQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKG-FANTVTYNTILNGLCMAGR 453
Query: 60 FESSLKLFDKIKQSG----LTPDAVTYNTV 85
+ + KLF+ +KQ + PD VTY T+
Sbjct: 454 VDEAYKLFNGMKQETVDGVIDPDFVTYTTL 483
>gi|357455405|ref|XP_003597983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487031|gb|AES68234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 520
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 46/77 (59%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ SYS Y+ L K G KA++++ + + +++V + N+++ + + + S+++F
Sbjct: 264 LHSYSIYMDILSKGGKPWKAVKLFKEMKRKGIQLDVVVYNIVIRAIGVSQGVDFSIRMFC 323
Query: 69 KIKQSGLTPDAVTYNTV 85
++K GL P VTYNT+
Sbjct: 324 EMKDLGLNPTVVTYNTI 340
>gi|242083798|ref|XP_002442324.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
gi|241943017|gb|EES16162.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
Length = 647
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +YS+ I K G A +Y + K +V + + + L +NG E +L L
Sbjct: 268 SVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGLVECALSLL 327
Query: 68 DKIKQSGLTPDAVTYNTV 85
D++ + G+ P+ VTYNT+
Sbjct: 328 DEMIKMGIKPNVVTYNTI 345
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y++++ + K GN A ++ + + K NV + ++ + K++ +LKL +
Sbjct: 129 IYTYNTFVDAICKCGNMELATQVVLDMEANNIKPNVVTYSTLMDGFSKLEKYDEALKLRE 188
Query: 69 KIKQSGLTPDAVTYNTV 85
K+K G+ D V YNT+
Sbjct: 189 KMKSLGIQLDRVCYNTL 205
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQQ G K+ + S+ S +K KNG +A+ I + + + N + N I+ + +G
Sbjct: 465 MQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGD 524
Query: 60 FESSLKLFDKIKQSGLTPDAVTYN 83
E +L L +K+K SG++ VTYN
Sbjct: 525 TEQALLLVEKMKNSGVSASIVTYN 548
Score = 41.6 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS L + G S L ++ + + + C+++L+ L ++GK + ++F+ +
Sbjct: 301 TYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEML 360
Query: 71 KQSGLTPDAVTYNTV 85
+GL P V YNT+
Sbjct: 361 VHTGLVPTTVIYNTL 375
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 30/43 (69%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
+ F N++++ L R+GK +LK+FD++ G+ P+ +TYNT+
Sbjct: 193 DAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTM 235
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 38/76 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I K G+ + + + + K NV N++LS L R G+ + + L D++
Sbjct: 231 TYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEM 290
Query: 71 KQSGLTPDAVTYNTVY 86
+ PD TY+ ++
Sbjct: 291 ASHSMLPDGFTYSILF 306
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 40/81 (49%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
G +YSS I L + G + + + +T K N ++CN +++ VR K E +L
Sbjct: 400 GDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDAL 459
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
+ F + G P VTYNT+
Sbjct: 460 RFFGNMVSKGCFPTVVTYNTL 480
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+ IK + KA E+ N + + +VF +++ L +NG +LKLF
Sbjct: 123 NLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLF 182
Query: 68 DKIKQSGLTPDAVTYNTV 85
D++ + G+TPD YN +
Sbjct: 183 DEMPERGVTPDVACYNIL 200
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 49/87 (56%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+Q+ K ++ +YS + L + AL ++ ++ K +V + N+I+ L +GK
Sbjct: 501 LQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKV 560
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
E +L+L+ ++KQ P+ VT+NT+ +
Sbjct: 561 EDALQLYSEMKQRNCVPNLVTHNTLME 587
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 44/78 (56%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I SY+ I L K G ++ EI++ + +++ + ++ L +G + + +++
Sbjct: 229 NIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVY 288
Query: 68 DKIKQSGLTPDAVTYNTV 85
++ ++G++PD V YNT+
Sbjct: 289 KEMAENGVSPDVVVYNTM 306
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + ++ I L +G AL++Y+ + + N+ N ++ + FE + K
Sbjct: 541 KPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASK 600
Query: 66 LFDKIKQSGLTPDAVTYN 83
++D I Q GL PD ++YN
Sbjct: 601 IWDHILQYGLQPDIISYN 618
>gi|147862833|emb|CAN78364.1| hypothetical protein VITISV_028668 [Vitis vinifera]
Length = 488
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 45/81 (55%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
GK S++ Y+ I K K + +Y + + K +VF N ++S RN +F +L
Sbjct: 81 GKPSVAMYNILINGYVKCREHEKVMTVYEKMIKDRVKPDVFTFNSLISSCCRNSQFGLAL 140
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
++F ++K G +P+ V++NT+
Sbjct: 141 EMFKEMKDKGCSPNVVSFNTL 161
>gi|357495179|ref|XP_003617878.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519213|gb|AET00837.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 203
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSL-KALEIYNSITDESDKVNVFICNLILSCLVRNG 58
MQ+ G T ++ +Y+S + GK G + I+ S+ +++I N +++C +
Sbjct: 46 MQRDGYTPTLVTYNSILNVYGKMGMPWSRVTAIFYSMKTNGVVPDLYIYNTLITCCRQGS 105
Query: 59 KFESSLKLFDKIKQSGLTPDAVTYNTV 85
+E ++ +FD+IK +G PD VTYN +
Sbjct: 106 LYEEAVNVFDRIKSAGFVPDRVTYNAL 132
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 44/78 (56%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++SSY++ I L G+ +AL + ++ + + N ++SCL R+G E ++ L
Sbjct: 416 NVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLL 475
Query: 68 DKIKQSGLTPDAVTYNTV 85
D ++QSG P ++YN V
Sbjct: 476 DDMEQSGFRPTVISYNIV 493
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y++ + L KNGN+ +ALEI+N + NV N ++S L G +L +
Sbjct: 382 IVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVP 441
Query: 69 KIKQSGLTPDAVTYNTV 85
+ G+ PD +TYN++
Sbjct: 442 AMISKGVDPDEITYNSL 458
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 42/78 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I+ + K G +A E+ S+T + K +V N++L + GK++ KL ++
Sbjct: 244 TYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEM 303
Query: 71 KQSGLTPDAVTYNTVYQS 88
G P+ VTY+ + S
Sbjct: 304 FSRGCEPNKVTYSILISS 321
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY I L K G A+ I + + ++ N IL+ L +NG +L++F+K+
Sbjct: 349 SYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKL 408
Query: 71 KQSGLTPDAVTYNTV 85
+ G P+ +YNT+
Sbjct: 409 RGMGCPPNVSSYNTM 423
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVY 86
+ +EI S T+ +VF N ++S + + E++ ++ +++K G PD VTYN +
Sbjct: 124 RVMEILESHTEP----DVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMI 179
Query: 87 QS 88
S
Sbjct: 180 GS 181
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ YSS I GK G +ALE++ + N+ N +LS L + G+ + KL
Sbjct: 842 NVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLL 901
Query: 68 DKIKQSGLTPDAVTYNTV 85
+++++ G PD VTYN +
Sbjct: 902 EEMEKVGCVPDLVTYNIL 919
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I LGK G + A ++ + D N+ N+++S L + G+ + +LF +
Sbjct: 394 AYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDL 453
Query: 71 KQSGLTPDAVTYNTV 85
K+ G PD TYNT+
Sbjct: 454 KEQGAVPDVFTYNTL 468
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 46/75 (61%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+S+YS I L K+ + +AL+++ + +E + + +LS LV++ K + +L++F+
Sbjct: 633 VSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFN 692
Query: 69 KIKQSGLTPDAVTYN 83
++++S L PD YN
Sbjct: 693 ELQESSLVPDTFVYN 707
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 45/77 (58%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +++ I L K+GN +A + +N + + NV +++ L + G+ E + ++F
Sbjct: 322 VHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFV 381
Query: 69 KIKQSGLTPDAVTYNTV 85
++K++ +PDA+ YNT+
Sbjct: 382 EMKENNCSPDAIAYNTL 398
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 42/78 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S + LGK+G +A ++ +T+E + +V ++ L + GK +L +F +
Sbjct: 740 TYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAM 799
Query: 71 KQSGLTPDAVTYNTVYQS 88
+ PD VTY+++ S
Sbjct: 800 AKKRCVPDVVTYSSLIDS 817
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G + + +Y + + L K+ AL+I+N + + S + F+ N++++ LV++ +
Sbjct: 659 MKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNR 718
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + KL D +K + PD TY ++
Sbjct: 719 VDEACKLVDSMKNQNILPDLFTYTSL 744
Score = 41.6 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 41/83 (49%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ S+ +S ++ G N ALEI+N + + + N +L LV+ G + S++
Sbjct: 214 RISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVI 273
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
+F K+ Q + PDA T+ S
Sbjct: 274 VFGKLGQFRIQPDAQTFRIFVHS 296
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G + S+ +YSS + K ++L +++ + + +V +L+++CL ++
Sbjct: 589 MEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDD 648
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+ +L +F ++K+ G+ P Y T+ S
Sbjct: 649 VDQALDVFGRMKEEGMEPLLGNYKTLLSS 677
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +YSS I LGK G +A + + + NV + + ++ + G + +L+LF+
Sbjct: 808 VVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFE 867
Query: 69 KIKQSGLTPDAVTYNTV 85
++++ P+ VTYN +
Sbjct: 868 EMQRRQCPPNIVTYNNL 884
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 40/76 (52%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y++ + L K G +A E++ + + + + N ++ L + G+ + + LF
Sbjct: 356 NVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLF 415
Query: 68 DKIKQSGLTPDAVTYN 83
++K GL P+ TYN
Sbjct: 416 KEMKDRGLVPNLRTYN 431
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 41/78 (52%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y++ + LGK G +A+ + + + + +V + +++ + + E SL LF
Sbjct: 562 TVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLF 621
Query: 68 DKIKQSGLTPDAVTYNTV 85
D++ + G D TY+ V
Sbjct: 622 DEMVRKGCVADVSTYSLV 639
Score = 34.7 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 40/74 (54%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ + L K+ +A ++ +S+ +++ ++F +L L ++G+ E + +F K+
Sbjct: 706 YNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMT 765
Query: 72 QSGLTPDAVTYNTV 85
+ G PD V Y ++
Sbjct: 766 EEGHEPDVVAYTSL 779
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M + G + + +Y+S + LGK G AL I+ ++ + +V + ++ L + G+
Sbjct: 764 MTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGR 823
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
E + F+ G TP+ Y+++ S
Sbjct: 824 VEEAYYFFENSISKGCTPNVGVYSSLIDS 852
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 44/77 (57%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+++Y+S + ++ N K+ EI + ++ K + N ++ RNG+ + + ++F
Sbjct: 648 SLTTYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIF 707
Query: 68 DKIKQSGLTPDAVTYNT 84
++K S L PD VTYNT
Sbjct: 708 SEMKDSALVPDVVTYNT 724
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALE-IYNSITDESDKVNVFICNLILSCLVRNG 58
MQQ G ++ +Y+ + GK G + + ++ +++ N ++SC R
Sbjct: 219 MQQDGCNPTLITYNVVLNVYGKMGMPWSNVTALVEAMRSRGVAPDLYTYNTLISCCRRGS 278
Query: 59 KFESSLKLFDKIKQSGLTPDAVTYNTV 85
+E ++ LF ++K G TPD VTYN +
Sbjct: 279 LYEEAVHLFQQMKLEGFTPDKVTYNAL 305
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 42/78 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S S+ IK LGK G A + ++ ++ ++V+ +++ +G++ ++ LF
Sbjct: 157 SSSAIPVIIKILGKAGRVSSAASLLLALQNDGVHIDVYAYTCLINAYSSSGRYRDAVNLF 216
Query: 68 DKIKQSGLTPDAVTYNTV 85
+K++Q G P +TYN V
Sbjct: 217 NKMQQDGCNPTLITYNVV 234
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 40/80 (50%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y++ + K G A++++ + K N+ N ++ GKF +K
Sbjct: 366 KPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMK 425
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+FD IK +PD VT+NT+
Sbjct: 426 VFDDIKLCNCSPDIVTWNTL 445
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ +G + S +Y+S I K G +AL++ + + K +VF +LS + GK
Sbjct: 325 MEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGK 384
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++++F +++ G P+ T+N +
Sbjct: 385 DDFAIQVFLEMRAVGCKPNICTFNAL 410
Score = 34.7 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 37/77 (48%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I ++++ + G+NG + I+ + N ++S R G F+ ++ ++
Sbjct: 439 IVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYK 498
Query: 69 KIKQSGLTPDAVTYNTV 85
+ ++G+ PD TYN V
Sbjct: 499 SMLEAGVVPDLSTYNAV 515
Score = 34.3 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 40/77 (51%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I++ ++ + G+ KA EI N + + ++ N ++ R+ F+ S ++
Sbjct: 614 ITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILR 673
Query: 69 KIKQSGLTPDAVTYNTV 85
++ + G+ PD ++YNTV
Sbjct: 674 EVLEKGMKPDRISYNTV 690
>gi|449445529|ref|XP_004140525.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g01570-like [Cucumis sativus]
gi|449523383|ref|XP_004168703.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g01570-like [Cucumis sativus]
Length = 803
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 48/79 (60%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I++Y+ I+ LGK G + A + + ++ +++ + N +++ L + G+ + KLF
Sbjct: 668 IATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMDDVNKLFG 727
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
+++ SG+ PD VT+NT+ +
Sbjct: 728 QMRNSGINPDVVTFNTLIE 746
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 41/74 (55%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+S + L K +A ++++ + E + + + N+++ L RNG+ E+ LF +K
Sbjct: 358 YNSLLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLK 417
Query: 72 QSGLTPDAVTYNTV 85
+ G DAVTY+ +
Sbjct: 418 KKGQIVDAVTYSII 431
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 43/78 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S S+YS L ++G + + +S+ + V+ ++L +R+GK++++L++
Sbjct: 89 SPSTYSQIFHILCRSGYLHEVPPLLDSMKRDGVSVDSHTFKVLLDAFIRSGKYDAALEIL 148
Query: 68 DKIKQSGLTPDAVTYNTV 85
D ++ G + + TYN+V
Sbjct: 149 DHMEDLGTSLELNTYNSV 166
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/77 (20%), Positives = 40/77 (51%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+S I L G AL ++ + + + F +I+ ++ + + + +F+
Sbjct: 285 LCTYNSIIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDATMIFN 344
Query: 69 KIKQSGLTPDAVTYNTV 85
+++ +GL PD + YN++
Sbjct: 345 EMEYNGLIPDTIVYNSL 361
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTS-ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M Q G T I +Y + I L K+G A E+ + + + ++NV I N +++ + + G
Sbjct: 459 MVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGN 518
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E ++KL +++ +G+ PDA+TY TV
Sbjct: 519 IEQAIKLMKEMEVAGIDPDAITYTTV 544
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 40/81 (49%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I + G+ KA ++ + D + V N++++ G E +L +
Sbjct: 540 TYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWM 599
Query: 71 KQSGLTPDAVTYNTVYQSDHI 91
+ G+ PDA+TYNT+ + I
Sbjct: 600 LEKGIVPDAITYNTLMKQHCI 620
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTS-ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M Q G T I +Y + I L K+G A E+ + + + ++NV I N +++ + + G
Sbjct: 459 MVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGN 518
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E ++KL +++ +G+ PDA+TY TV
Sbjct: 519 IEQAIKLMKEMEVAGIDPDAITYTTV 544
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 40/81 (49%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I + G+ KA ++ + D + V N++++ G E +L +
Sbjct: 540 TYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWM 599
Query: 71 KQSGLTPDAVTYNTVYQSDHI 91
+ G+ PDA+TYNT+ + I
Sbjct: 600 LEKGIVPDAITYNTLMKQHCI 620
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I+ LG G ++Y + D K ++ N +L CL + G+ E++ +LF +
Sbjct: 274 TYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDM 333
Query: 71 KQSGLTPDAVTYNTV 85
K GL D VTYN +
Sbjct: 334 KFKGLNADTVTYNIL 348
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+ I+ LG G ++++ S+T + + N+F + ++ G+ + + +F
Sbjct: 135 VYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQ 194
Query: 69 KIKQSGLTPDAVTYNTV 85
++ Q GL PDAVTYN +
Sbjct: 195 QMVQKGLQPDAVTYNIL 211
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G ++ SYSS I+ GK G + A+ ++ + E N NL++ CL+R G+
Sbjct: 403 MKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGR 462
Query: 60 FESSLKLFDKIKQSGLTPDAVT 81
F ++++ +++ +G VT
Sbjct: 463 FGAAMEYLREMRDAGCQMGKVT 484
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 44/83 (53%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K I + ++ + L K G A E++ + + + N++++ L R GK +++
Sbjct: 304 KYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGA 363
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
L +++++G P+ +TYNT+ S
Sbjct: 364 LLLEMEENGCAPNIITYNTLISS 386
>gi|414876286|tpg|DAA53417.1| TPA: hypothetical protein ZEAMMB73_373649 [Zea mays]
Length = 561
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 45/80 (56%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S +SYS I L + G+ A+E++ +T + NV+ ++S ++G + + +LF
Sbjct: 155 SPASYSPLIAGLCRKGDLASAMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLF 214
Query: 68 DKIKQSGLTPDAVTYNTVYQ 87
K+ +S L P+ VT+N + +
Sbjct: 215 HKMMESSLVPNEVTFNVMIE 234
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 42/78 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ ++++ I K+GN +A +++ + + S N N+++ R G + +L+
Sbjct: 190 NVYTFTALISGFCKDGNMDEATRLFHKMMESSLVPNEVTFNVMIEGYCRVGNIRKAFQLY 249
Query: 68 DKIKQSGLTPDAVTYNTV 85
D++ GLTPD TY ++
Sbjct: 250 DQMLDRGLTPDNYTYRSL 267
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 39/73 (53%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
+++I LGK+G +A +++ + D N +++ L + G E +L +FD++++
Sbjct: 55 NAWIDRLGKDGRYREAEKLFRGMADRGLDPNEVTYAILIHSLCKRGMMEDALCMFDRMRE 114
Query: 73 SGLTPDAVTYNTV 85
G+ YN++
Sbjct: 115 KGIRMTVYPYNSL 127
>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Glycine max]
Length = 576
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 45/83 (54%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y+ I GK G S AL++++ + K N+ +++ R G E + +
Sbjct: 257 KPTTETYTMLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEE 316
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
+F++++++GL PD YN + ++
Sbjct: 317 VFEQMQEAGLEPDVYAYNALMEA 339
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ +G +S Y++YI L K GNS KA EI+ + ++ K ++++ + GK
Sbjct: 216 MRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKPTTETYTMLINLYGKAGK 275
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+LKLF ++ P+ TY +
Sbjct: 276 SFMALKLFHEMMSHDCKPNICTYTAL 301
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 40/85 (47%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
M K +I +Y++ + + G KA E++ + + + +V+ N ++ R G
Sbjct: 287 MSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYP 346
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++F ++ G PD +YN +
Sbjct: 347 YGAAEIFSLMQHMGCEPDRASYNIL 371
>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13630-like [Cucumis sativus]
Length = 830
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ I + GN +AL++ K+NV N++LSCL + G+ E +L LFD
Sbjct: 376 LVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFD 435
Query: 69 KIKQSGLTPDAVTYNTV 85
+++ L PD + Y+ +
Sbjct: 436 EMETLRLEPDFIVYSIL 452
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 54 LVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
L R K SL+L + + GL PD+VTYNT+ Q
Sbjct: 631 LCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQ 664
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 38/67 (56%)
Query: 19 LGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPD 78
L KNGN +A +++ T +V + N+++ VR +++L+ K+ + G+TP
Sbjct: 491 LFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPS 550
Query: 79 AVTYNTV 85
VT+NT+
Sbjct: 551 VVTFNTL 557
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ IK L K G + K L + + E ++ CN++++ R GK +L+ +
Sbjct: 549 TYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDM 608
Query: 71 KQSGLTPDAVTYNTV 85
Q GLTPD VTYN++
Sbjct: 609 IQRGLTPDIVTYNSL 623
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
SI+S + I + G AL+ + ++ N +++ L + G+F+ +L LF
Sbjct: 581 SINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLF 640
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ ++ G+ PDAVTYNT+
Sbjct: 641 NGLQAKGIHPDAVTYNTL 658
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
Y+ I L K+G AL++Y ++ + K +++ N ++ L +N K E +L L+ +
Sbjct: 444 GYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDM 503
Query: 71 KQSGLTPDAVTYNTVYQS 88
G+ + VTYNT+ +
Sbjct: 504 LLEGVIANTVTYNTLIHA 521
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 45/80 (56%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ ++ +Y+ I K G+ +A ++ NS++ + +N N ++ L ++GK + +L+
Sbjct: 404 EPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQ 463
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
++ ++ G PD T+N++
Sbjct: 464 MYGEMSSKGCKPDIYTFNSL 483
>gi|449462001|ref|XP_004148730.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Cucumis sativus]
gi|449521148|ref|XP_004167592.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Cucumis sativus]
Length = 710
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 43/76 (56%)
Query: 3 QHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFES 62
+H + SY++ + G GN +++E++ + + ++NV C ++ CL ++G+ +
Sbjct: 425 KHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKSGRIDD 484
Query: 63 SLKLFDKIKQSGLTPD 78
+++F+ Q G+ PD
Sbjct: 485 LVRVFNVSVQKGIKPD 500
Score = 34.7 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 26/36 (72%)
Query: 50 ILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
I++C + +F+ +++ F+++ ++GL PD VTY+ +
Sbjct: 226 IITCAKKCSRFDKAMEWFERMYKTGLMPDEVTYSAI 261
>gi|302769874|ref|XP_002968356.1| hypothetical protein SELMODRAFT_67614 [Selaginella moellendorffii]
gi|300164000|gb|EFJ30610.1| hypothetical protein SELMODRAFT_67614 [Selaginella moellendorffii]
Length = 161
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K S+ Y +K L +NG ++ +I E + ++ + ++ V +G+F +LK
Sbjct: 81 KPSVPLYRDMLKSLARNGRVEGVYSLFETIKQEKAEPHIAMFTEVIDIFVGSGRFRDALK 140
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F+ +K+S P+ TY T+
Sbjct: 141 VFEMMKESEAPPNVRTYRTI 160
>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Cucumis
sativus]
Length = 830
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ I + GN +AL++ K+NV N++LSCL + G+ E +L LFD
Sbjct: 376 LVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFD 435
Query: 69 KIKQSGLTPDAVTYNTV 85
+++ L PD + Y+ +
Sbjct: 436 EMETLRLEPDFIVYSIL 452
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 54 LVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
L R K SL+L + + GL PD+VTYNT+ Q
Sbjct: 631 LCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQ 664
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 38/67 (56%)
Query: 19 LGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPD 78
L KNGN +A +++ T +V + N+++ VR +++L+ K+ + G+TP
Sbjct: 491 LFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPS 550
Query: 79 AVTYNTV 85
VT+NT+
Sbjct: 551 VVTFNTL 557
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 44/78 (56%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++SSY++ I L G+ +AL + ++ + + N ++SCL R+G E ++ L
Sbjct: 426 NVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLL 485
Query: 68 DKIKQSGLTPDAVTYNTV 85
D ++QSG P ++YN V
Sbjct: 486 DDMEQSGFRPTVISYNIV 503
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y++ + L KNGN+ +ALEI+N + NV N ++S L G +L +
Sbjct: 392 IVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVP 451
Query: 69 KIKQSGLTPDAVTYNTV 85
+ G+ PD +TYN++
Sbjct: 452 AMISKGIDPDEITYNSL 468
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 42/78 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I+ + K G +A E+ S+T + + +V N++L + GK++ KL ++
Sbjct: 254 TYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEM 313
Query: 71 KQSGLTPDAVTYNTVYQS 88
G P+ VTY+ + S
Sbjct: 314 FSRGCEPNKVTYSILISS 331
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY I L K G A+ I + + ++ N IL+ L +NG +L++F+K+
Sbjct: 359 SYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKL 418
Query: 71 KQSGLTPDAVTYNTV 85
+ G P+ +YNT+
Sbjct: 419 RGMGCPPNVSSYNTM 433
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVY 86
+ +EI S T+ +VF N ++S + + E++ ++ +++K G PD VTYN +
Sbjct: 134 RVMEILESHTEP----DVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMI 189
Query: 87 QS 88
S
Sbjct: 190 GS 191
>gi|428179078|gb|EKX47950.1| hypothetical protein GUITHDRAFT_136922 [Guillardia theta CCMP2712]
Length = 714
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 3 QHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICN-LILSCLVRNGKFE 61
QH T + +YS+ I K A+E+Y + + NV N LI +CL R F
Sbjct: 300 QHVITDVITYSTLISTFAKTRKYSLAIEMYEKMMERQVMPNVITYNSLIFACL-RANNFS 358
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+ FD ++ G++P+ VTY+T+ S
Sbjct: 359 QAFAFFDDMQAQGISPNVVTYSTMIAS 385
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 40/74 (54%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +Y+S I K+ N KA ++Y + + N+ NLI+S L K LK+
Sbjct: 629 SVQAYNSLISACVKSSNYQKAFDVYKGMKTSGVRANIVTYNLIISILSGQRKLSEVLKVI 688
Query: 68 DKIKQSGLTPDAVT 81
+++KQ +TPD+ T
Sbjct: 689 NEMKQEEVTPDSET 702
>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
Length = 702
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 32 YNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV---YQS 88
+ + + K ++ I N +L+ +NG + + ++FD IKQSGL+PD +TYN++ Y
Sbjct: 498 FQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAK 557
Query: 89 DHITW 93
+ +W
Sbjct: 558 SNESW 562
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 38/77 (49%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ ++ GK GN +AL + + D + + N + R G FE + K D
Sbjct: 195 VVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLD 254
Query: 69 KIKQSGLTPDAVTYNTV 85
+ GL P+ TYNTV
Sbjct: 255 TMTSKGLLPNTFTYNTV 271
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 42/83 (50%)
Query: 3 QHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFES 62
Q K + ++S + KNG KA E+++SI ++ N ++ ++ +
Sbjct: 504 QGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWE 563
Query: 63 SLKLFDKIKQSGLTPDAVTYNTV 85
+ K+ ++K S + PD V+YNTV
Sbjct: 564 AEKILKQLKSSQVKPDVVSYNTV 586
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + G +AL +++ + NV NLI L + +F + L++ +++
Sbjct: 267 TYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEM 326
Query: 71 KQSGLTPDAVTYNTV 85
+SG TP+ VT+NT+
Sbjct: 327 SRSGCTPNRVTWNTM 341
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDE-----SDKVNVFICNLILSCLVRNGK 59
G ++ ++ LG+ G ++ + DE +++V +L L R G+
Sbjct: 49 GAADAAALEMVVRALGREGQH----DVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGR 104
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+E +L+LF ++++ G+ P VTYN V
Sbjct: 105 YERALQLFAELRRQGVVPTIVTYNVV 130
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 35/71 (49%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
S+ I G++G +A+ + + V N +L + G + +L++ +++
Sbjct: 164 STVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMED 223
Query: 73 SGLTPDAVTYN 83
SG PDAVTYN
Sbjct: 224 SGCQPDAVTYN 234
>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
Length = 793
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 32 YNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV---YQS 88
+ + + K ++ I N +L+ +NG + + ++FD IKQSGL+PD +TYN++ Y
Sbjct: 589 FQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAK 648
Query: 89 DHITW 93
+ +W
Sbjct: 649 SNESW 653
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 38/77 (49%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ ++ GK GN +AL + + D + + N + R G FE + K D
Sbjct: 286 VVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLD 345
Query: 69 KIKQSGLTPDAVTYNTV 85
+ GL P+ TYNTV
Sbjct: 346 TMTSKGLLPNTFTYNTV 362
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 42/83 (50%)
Query: 3 QHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFES 62
Q K + ++S + KNG KA E+++SI ++ N ++ ++ +
Sbjct: 595 QGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWE 654
Query: 63 SLKLFDKIKQSGLTPDAVTYNTV 85
+ K+ ++K S + PD V+YNTV
Sbjct: 655 AEKILKQLKSSQVKPDVVSYNTV 677
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + G +AL +++ + NV NLI L + +F + L++ +++
Sbjct: 358 TYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEM 417
Query: 71 KQSGLTPDAVTYNTV 85
+SG TP+ VT+NT+
Sbjct: 418 SRSGCTPNRVTWNTM 432
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDE-----SDKVNVFICNLILSCLVRNGK 59
G ++ ++ LG+ G ++ + DE +++V +L L R G+
Sbjct: 140 GAADAAALEMVVRALGREGQH----DVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGR 195
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+E +L+LF ++++ G+ P VTYN V
Sbjct: 196 YERALQLFAELRRQGVVPTIVTYNVV 221
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 35/71 (49%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
S+ I G++G +A+ + + V N +L + G + +L++ +++
Sbjct: 255 STVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMED 314
Query: 73 SGLTPDAVTYN 83
SG PDAVTYN
Sbjct: 315 SGCQPDAVTYN 325
>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
[Oryza sativa Japonica Group]
gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 793
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 32 YNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV---YQS 88
+ + + K ++ I N +L+ +NG + + ++FD IKQSGL+PD +TYN++ Y
Sbjct: 589 FQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAK 648
Query: 89 DHITW 93
+ +W
Sbjct: 649 SNESW 653
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 38/77 (49%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ ++ GK GN +AL + + D + + N + R G FE + K D
Sbjct: 286 VVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLD 345
Query: 69 KIKQSGLTPDAVTYNTV 85
+ GL P+ TYNTV
Sbjct: 346 TMTSKGLLPNTFTYNTV 362
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 42/83 (50%)
Query: 3 QHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFES 62
Q K + ++S + KNG KA E+++SI ++ N ++ ++ +
Sbjct: 595 QGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWE 654
Query: 63 SLKLFDKIKQSGLTPDAVTYNTV 85
+ K+ ++K S + PD V+YNTV
Sbjct: 655 AEKILKQLKSSQVKPDVVSYNTV 677
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + G +AL +++ + NV NLI L + +F + L++ +++
Sbjct: 358 TYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEM 417
Query: 71 KQSGLTPDAVTYNTV 85
+SG TP+ VT+NT+
Sbjct: 418 SRSGCTPNRVTWNTM 432
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDE-----SDKVNVFICNLILSCLVRNGK 59
G ++ ++ LG+ G ++ + DE +++V +L L R G+
Sbjct: 140 GAADAAALEMVVRALGREGQH----DVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGR 195
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+E +L+LF ++++ G+ P VTYN V
Sbjct: 196 YERALQLFAELRRQGVVPTIVTYNVV 221
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 35/71 (49%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
S+ I G++G +A+ + + V N +L + G + +L++ +++
Sbjct: 255 STVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMED 314
Query: 73 SGLTPDAVTYN 83
SG PDAVTYN
Sbjct: 315 SGCQPDAVTYN 325
>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Brachypodium distachyon]
Length = 1102
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M HG T +Y +I + GK+G SLKA++ Y + + +V N +L L ++G+
Sbjct: 417 MNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGR 476
Query: 60 FESSLKLFDKIKQSGLTPDAVTY 82
+ ++F ++K G+ PD +TY
Sbjct: 477 LGMAKRVFHELKSIGVCPDNITY 499
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ HG K ++ SY+ I+ LG+ G +A +I + DE K +V +++ L G+
Sbjct: 242 MEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGR 301
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +F K+K S PD VTY T+
Sbjct: 302 VSDAKDVFWKMKASDQKPDRVTYITL 327
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 14 SYIKFL---GKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YI L G NG+S +EI+N++ + NV ++ L + G+ + + +FD++
Sbjct: 323 TYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQM 382
Query: 71 KQSGLTPDAVTYNTV 85
KQ G+ P +YN++
Sbjct: 383 KQKGIEPQQYSYNSL 397
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 44/77 (57%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I SY+ I L G +L + +T+ + ++ NL++ L R+G+ E ++ LF+
Sbjct: 951 IKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFN 1010
Query: 69 KIKQSGLTPDAVTYNTV 85
+++SG+ P+ TYN++
Sbjct: 1011 DMEKSGIAPNLYTYNSL 1027
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 36/74 (48%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + LG+ G + + + + S N+ N +L CL +NG+ +L + +
Sbjct: 568 TYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNM 627
Query: 71 KQSGLTPDAVTYNT 84
G PD +YNT
Sbjct: 628 TMKGCMPDLSSYNT 641
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ IK K N+ +A+++++ + + +V N ++ L + G+ + K+F ++
Sbjct: 498 TYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHEL 557
Query: 71 KQSGLTPDAVTYNTV 85
K+ L P TYNT+
Sbjct: 558 KEMNLDPTDCTYNTL 572
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 33/61 (54%)
Query: 23 GNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTY 82
GN+ K E++ ++ D+ ++ +++ L G+ SL F ++ + GL PD +TY
Sbjct: 930 GNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITY 989
Query: 83 N 83
N
Sbjct: 990 N 990
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I LG++G +A+ ++N + N++ N ++ L + GK + K+++++
Sbjct: 988 TYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEEL 1047
Query: 71 KQSGLTPDAVTYNTV 85
++G P+ TYN +
Sbjct: 1048 LKNGWKPNVFTYNAL 1062
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G ++ +Y+S I +LGK G + +A ++Y + K NVF N ++ +G
Sbjct: 1012 MEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGS 1071
Query: 60 FESSLKLFDKIKQSGLTPDAVTY 82
+++ + ++ G P++ TY
Sbjct: 1072 TDNAFASYGQMIVGGCPPNSSTY 1094
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +YS + GK + + + + D K NV+ + + L + G+FE + K+
Sbjct: 216 SVRTYSVLMLAFGKR-DVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKIL 274
Query: 68 DKIKQSGLTPDAVTYNTV 85
K++ G PD VT NTV
Sbjct: 275 QKMEDEGCKPDVVT-NTV 291
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G +Y+S I +GN +ALE++N + NV +I+S L ++G+
Sbjct: 494 MQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGR 553
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQSDH 90
+ + KL+D++ + G+ PD Y+++ S H
Sbjct: 554 ADEAFKLYDEMNKEGIVPDDGIYSSLIASLH 584
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G ++ S+S I K N +A ++ + + +V N + + GK
Sbjct: 424 MEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGK 483
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E + KL +++++ GL PD TY ++
Sbjct: 484 MEEAYKLINEMQERGLMPDTYTYTSL 509
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 37/65 (56%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
K G +AL + N + + +++ F CN+I S R+ + E + +L +++ G+ P+ V
Sbjct: 375 KKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVV 434
Query: 81 TYNTV 85
+++ +
Sbjct: 435 SFSIL 439
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ GK S+ +Y+++I+ K G +A ++ N + + + + ++ +G
Sbjct: 459 MEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGN 518
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +L+LF+++ Q GL + VTY +
Sbjct: 519 VDRALELFNEMPQLGLNRNVVTYTVI 544
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G +Y+S I +GN +ALE++N + NV +I+S L ++G+
Sbjct: 498 MQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGR 557
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQSDH 90
+ + KL+D++ + G+ PD Y+++ S H
Sbjct: 558 ADEAFKLYDEMNKEGIVPDDGIYSSLIASLH 588
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G ++ S+S I K N +A ++ + + +V N + + GK
Sbjct: 428 MEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGK 487
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E + KL +++++ GL PD TY ++
Sbjct: 488 MEEAYKLINEMQERGLMPDTYTYTSL 513
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 37/65 (56%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
K G +AL + N + + +++ F CN+I S R+ + E + +L +++ G+ P+ V
Sbjct: 379 KKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVV 438
Query: 81 TYNTV 85
+++ +
Sbjct: 439 SFSIL 443
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ GK S+ +Y+++I+ K G +A ++ N + + + + ++ +G
Sbjct: 463 MEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGN 522
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +L+LF+++ Q GL + VTY +
Sbjct: 523 VDRALELFNEMPQLGLNRNVVTYTVI 548
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%)
Query: 4 HGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESS 63
G +YSS I L + G + + + +T K N +CN +++ VR K E +
Sbjct: 424 RGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDA 483
Query: 64 LKLFDKIKQSGLTPDAVTYNTV 85
L+ F + G P VTYNT+
Sbjct: 484 LRFFGNMVSKGCFPTVVTYNTL 505
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
++ +Y+ IK + KA E+ N + ++ +VF +++ L +NG +LKL
Sbjct: 147 PNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKL 206
Query: 67 FDKIKQSGLTPDAVTYNTV 85
FD++ + G+TPD YN +
Sbjct: 207 FDEMPERGVTPDVACYNIL 225
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ +YS + L + AL ++ ++ K +V + N+I+ L +GK E +L+
Sbjct: 531 KPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQ 590
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
L+ ++KQ P+ VT+NT+ +
Sbjct: 591 LYSEMKQRKCVPNLVTHNTLMEG 613
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 44/79 (55%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
+I SY+ I L K G ++ EI++ + +++ + ++ L +G + + ++
Sbjct: 253 PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRV 312
Query: 67 FDKIKQSGLTPDAVTYNTV 85
+ ++ ++G++PD V YNT+
Sbjct: 313 YKEMAENGVSPDVVVYNTM 331
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+++ K + ++ I L +G AL++Y+ + N+ N ++ + F
Sbjct: 561 LEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDF 620
Query: 61 ESSLKLFDKIKQSGLTPDAVTYN 83
E + K++D I Q G PD ++YN
Sbjct: 621 ERASKIWDHILQYGPQPDIISYN 643
>gi|356516744|ref|XP_003527053.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 882
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G + + +YS I LGK+GN A ++ + D+ N+ N++++ +
Sbjct: 482 MQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARN 541
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
++++LKL+ ++ +G PD VTY+ V +
Sbjct: 542 YQTALKLYRDMQNAGFKPDKVTYSIVME 569
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 31/71 (43%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y I GK GN KA E Y+++ NV CN +LS +R + + L +
Sbjct: 599 YGLLIDLWGKAGNVEKAWEWYHAMLRAGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQNMV 658
Query: 72 QSGLTPDAVTY 82
GL P TY
Sbjct: 659 TLGLNPSLQTY 669
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G + +Y + I K G A+ +Y + + + F +++++CL ++G
Sbjct: 447 MQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGN 506
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
++ +LF ++ G P+ VTYN +
Sbjct: 507 LSAAHRLFCEMVDQGCVPNIVTYNIL 532
>gi|224068256|ref|XP_002302689.1| predicted protein [Populus trichocarpa]
gi|222844415|gb|EEE81962.1| predicted protein [Populus trichocarpa]
Length = 640
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 47/79 (59%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I++Y+ I+ LGK G + A + + + + +++ + N ++ L + G+ + + LF+
Sbjct: 504 IATYNLVIQGLGKMGRADLASSVLDKLMKQGGYLDIVMYNTLIDALGKAGRIDEANNLFE 563
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++K SGL PD VTYN + +
Sbjct: 564 QMKISGLNPDVVTYNIMIE 582
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 41/74 (55%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+S + + K ++A +++ + + + + + N+++ L +NG+ E+ LF +K
Sbjct: 193 YNSLLDGMFKARKVMEACQLFEKMVQDGVRASCWTYNILIDGLCKNGRAEAGYNLFCGLK 252
Query: 72 QSGLTPDAVTYNTV 85
+ G DAVTY+ V
Sbjct: 253 KKGQFVDAVTYSIV 266
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 39/77 (50%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+S I L G A+ +Y + + + F +++ ++ + E + K+F
Sbjct: 120 LCTYNSLIHVLCLAGKVKDAVIVYEELKVSGHEPDAFTYRILIQGCCKSYQMEDATKIFS 179
Query: 69 KIKQSGLTPDAVTYNTV 85
+++ +G PD V YN++
Sbjct: 180 EMQYNGFLPDTVVYNSL 196
Score = 34.7 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 18 FLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTP 77
FL K SL A +++ TD + N I+S V+ G F + +F+++ + P
Sbjct: 444 FLAKGKLSL-ACKLFEIFTDMGVDPVSYTYNSIMSSFVKKGYFNRAWDVFNEMGEKVCPP 502
Query: 78 DAVTYNTVYQ 87
D TYN V Q
Sbjct: 503 DIATYNLVIQ 512
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%)
Query: 4 HGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESS 63
G +YSS I L + G + + + +T K N +CN +++ VR K E +
Sbjct: 424 RGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDA 483
Query: 64 LKLFDKIKQSGLTPDAVTYNTV 85
L+ F + G P VTYNT+
Sbjct: 484 LRFFGNMVSKGCFPTVVTYNTL 505
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
++ +Y+ IK + KA E+ N + ++ +VF +++ L +NG +LKL
Sbjct: 147 PNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKL 206
Query: 67 FDKIKQSGLTPDAVTYNTV 85
FD++ + G+TPD YN +
Sbjct: 207 FDEMPERGVTPDVACYNIL 225
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ +YS + L + AL ++ ++ K +V + N+I+ L +GK E +L+
Sbjct: 531 KPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQ 590
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
L+ ++KQ P+ VT+NT+ +
Sbjct: 591 LYSEMKQRKCVPNLVTHNTLMEG 613
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 44/79 (55%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
+I SY+ I L K G ++ EI++ + +++ + ++ L +G + + ++
Sbjct: 253 PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRV 312
Query: 67 FDKIKQSGLTPDAVTYNTV 85
+ ++ ++G++PD V YNT+
Sbjct: 313 YKEMAENGVSPDVVVYNTM 331
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
YSS I G++G KA+EI+ ++ K N+ + N ++ + G + ++L++F ++
Sbjct: 159 YSSLICAYGRSGKLAKAVEIFEAMKVVC-KPNLVVYNAVIDACSKGGDYPTALRIFREML 217
Query: 72 QSGLTPDAVTYNTV 85
+ G++PD +T+NT+
Sbjct: 218 EQGMSPDRITFNTL 231
Score = 41.6 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G I +Y++ + GK G +A+ + + N+ + ++ ++G
Sbjct: 357 MEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGF 416
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
++ LF +K++GL PD V Y+T+
Sbjct: 417 HRDAMALFQDVKKAGLQPDVVLYSTL 442
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+Q G + +I +YS+ I K+G A+ ++ + + +V + + ++ +NG
Sbjct: 392 MKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGS 451
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +L L +++ +G+ P+ +TYN++
Sbjct: 452 PDEALALLEEMADNGIRPNVITYNSL 477
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 42/80 (52%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ Y++ I K G+ AL I+ + ++ + N ++S R ++E +
Sbjct: 187 KPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDR 246
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F ++++ G+ D VTYNT+
Sbjct: 247 IFAEMEERGIARDDVTYNTL 266
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 39/74 (52%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ + + GN +A I ++ + ++ N +L + GKF ++ L +++K
Sbjct: 334 YNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMK 393
Query: 72 QSGLTPDAVTYNTV 85
Q G +P+ +TY+ +
Sbjct: 394 QRGASPNILTYSAL 407
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
YSS I G++G KA+EI+ ++ K N+ + N ++ + G + ++L++F ++
Sbjct: 158 YSSLICAYGRSGKLAKAVEIFEAMKVVC-KPNLVVYNAVIDACSKGGDYPTALRIFREML 216
Query: 72 QSGLTPDAVTYNTV 85
+ G++PD +T+NT+
Sbjct: 217 EQGMSPDRITFNTL 230
Score = 41.6 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G I +Y++ + GK G +A+ + + N+ + ++ ++G
Sbjct: 356 MEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGF 415
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
++ LF +K++GL PD V Y+T+
Sbjct: 416 HRDAMALFQDVKKAGLQPDVVLYSTL 441
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+Q G + +I +YS+ I K+G A+ ++ + + +V + + ++ +NG
Sbjct: 391 MKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGS 450
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +L L +++ +G+ P+ +TYN++
Sbjct: 451 PDEALALLEEMADNGIRPNVITYNSL 476
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 42/80 (52%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ Y++ I K G+ AL I+ + ++ + N ++S R ++E +
Sbjct: 186 KPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDR 245
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F ++++ G+ D VTYNT+
Sbjct: 246 IFAEMEERGIARDDVTYNTL 265
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 39/74 (52%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ + + GN +A I ++ + ++ N +L + GKF ++ L +++K
Sbjct: 333 YNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMK 392
Query: 72 QSGLTPDAVTYNTV 85
Q G +P+ +TY+ +
Sbjct: 393 QRGASPNILTYSAL 406
>gi|224091084|ref|XP_002309173.1| predicted protein [Populus trichocarpa]
gi|222855149|gb|EEE92696.1| predicted protein [Populus trichocarpa]
Length = 506
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
YS+ I+FL K L AL + N + + K ++F ++L ++ + + + +LFD++
Sbjct: 259 YSNVIRFLVKGKRGLDALHVLNHMKSDRIKPDIFCYTMVLHGVIEDKDYLKADELFDELL 318
Query: 72 QSGLTPDAVTYNT 84
GL PDA TYN
Sbjct: 319 VFGLVPDAYTYNV 331
>gi|449468059|ref|XP_004151739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 225
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y ++ L KNG +A+E +N + + K+++ N ++ L + GK E++ +LF+K+
Sbjct: 54 YRIFLDGLCKNGCLYEAMEHFNQLKSYNIKLDIESYNCLIDGLCKAGKLETAWELFEKLY 113
Query: 72 QSGLTPDAVTYNTV 85
Q GL D VTYN +
Sbjct: 114 QEGLQSDVVTYNIM 127
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 45/80 (56%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K I SY+ I L K G A E++ + E + +V N+++ + G+ + +
Sbjct: 83 KLDIESYNCLIDGLCKAGKLETAWELFEKLYQEGLQSDVVTYNIMIHGFCKVGQVDKANI 142
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LF+K++++G TPD +TYNT+
Sbjct: 143 LFEKMEENGCTPDIITYNTL 162
>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
Length = 933
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 15 YIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSG 74
+ KF G++ ALE+Y+ + E +VN FI + +++ L +NGK E ++ LF SG
Sbjct: 459 FFKFQGQDA----ALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSG 514
Query: 75 LTPDAVTYNTV 85
L+ D V Y T+
Sbjct: 515 LSLDHVNYTTL 525
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 41/78 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I L K G+ A + + D + + + N+ ++CL GKF+ + + ++
Sbjct: 521 NYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEM 580
Query: 71 KQSGLTPDAVTYNTVYQS 88
+ GL PD TYNT+ S
Sbjct: 581 RNMGLKPDQSTYNTMIVS 598
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 44/81 (54%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++++Y+ +I + + +A ++Y + ++V + +++ L R+G+F + LF
Sbjct: 238 NVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALF 297
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
++ + G P+ VTY T+ S
Sbjct: 298 REMDKVGAVPNHVTYCTLIDS 318
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 44/83 (53%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K S+Y++ I + G + KAL++ + + S K N+ N +++ L G E +
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
L +++ +G +P ++T+ V Q+
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQA 668
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 14 SYIKFLGK---NGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YI L K NG S +EI+N++ + NV ++ L + G+ +L++FD++
Sbjct: 381 TYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEM 440
Query: 71 KQSGLTPDAVTYNTV 85
KQ G+ P+ +YN++
Sbjct: 441 KQKGIVPEQYSYNSL 455
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M HG K + ++ +I + GK+G S+KA++ Y + + +V N +L L ++G+
Sbjct: 475 MDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGR 534
Query: 60 FESSLKLFDKIKQSGLTPDAVTY 82
+ ++F ++K G++PD +TY
Sbjct: 535 LGMAKRVFHELKAMGVSPDTITY 557
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 36/75 (48%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + LG+ G + + + + + N+ N IL CL +NG +L + +
Sbjct: 626 TYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSM 685
Query: 71 KQSGLTPDAVTYNTV 85
G PD +YNTV
Sbjct: 686 TTKGCIPDLSSYNTV 700
Score = 41.2 bits (95), Expect = 0.070, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ HG K ++ SY+ I+ LG+ +A I + +E K +V +++ L G+
Sbjct: 300 MEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGR 359
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +F K+K+S PD VTY T+
Sbjct: 360 ISDAKDVFWKMKKSDQKPDRVTYITL 385
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I SY+ I L K G L + + + + ++ NL++ L ++ + E ++ LF+
Sbjct: 1009 IKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFN 1068
Query: 69 KIKQSGLTPDAVTYNTV 85
++++ G+ P+ TYN++
Sbjct: 1069 EMQKKGIVPNLYTYNSL 1085
Score = 37.4 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 31/61 (50%)
Query: 23 GNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTY 82
GN+ K ++ + D+ ++ +I+ L + G+ L F ++ + GL PD +TY
Sbjct: 988 GNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITY 1047
Query: 83 N 83
N
Sbjct: 1048 N 1048
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G ++ +Y+S I LGK G + +A ++Y + + K NVF N ++ +G
Sbjct: 1070 MQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGS 1129
Query: 60 FESSLKLFDKIKQSGLTPDAVT 81
+S+ + ++ G P++ T
Sbjct: 1130 TDSAYAAYGRMIVGGCLPNSST 1151
Score = 34.7 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I LGK+ +A+ ++N + + N++ N ++ L + GK + K+++++
Sbjct: 1046 TYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEEL 1105
Query: 71 KQSGLTPDAVTYNTV 85
G P+ TYN +
Sbjct: 1106 LTKGWKPNVFTYNAL 1120
Score = 34.3 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 38/73 (52%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
+S I L K G +A +I+ + + + + N +L+ L R GK + + L +++
Sbjct: 593 NSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYH 652
Query: 73 SGLTPDAVTYNTV 85
S P+ +TYNT+
Sbjct: 653 SNYPPNLITYNTI 665
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 45/75 (60%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SYSS I L K+G A+++Y I+ +S K N I N +++ + KF +++++ ++
Sbjct: 442 SYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQM 501
Query: 71 KQSGLTPDAVTYNTV 85
++ +P +TYNT+
Sbjct: 502 AENDCSPTTITYNTL 516
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+++Y S I+ L ++ AL ++N I D+ + +V + N+++ L GK + + +L
Sbjct: 545 VNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLS 604
Query: 69 KIKQ-SGLTPDAVTYNTV 85
++K+ + P+ VTYNT+
Sbjct: 605 EMKEKNNCCPNVVTYNTL 622
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
++S+ I L + G + K+L+I +++ F + ++S L ++G+ + ++KL++KI
Sbjct: 407 TFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKI 466
Query: 71 KQSGLTPDAVTYNTV 85
P++ YN +
Sbjct: 467 SMDSFKPNSHIYNAL 481
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
N+ N++L L G + ++ LFD ++ GL PD +TY+T+
Sbjct: 158 NLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTL 200
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 43/78 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+ ++ L G+ +A+ +++S+ + + ++S V+N + +++L L
Sbjct: 158 NLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLL 217
Query: 68 DKIKQSGLTPDAVTYNTV 85
D++ + PDAV YN +
Sbjct: 218 DEMPSYEVQPDAVCYNAL 235
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK- 69
+YS+ + KN AL + + + + + N +L RNG+FE +++++++
Sbjct: 196 TYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQL 255
Query: 70 IKQSGLTPDAVTYNTV 85
++ G +P+ TYN +
Sbjct: 256 VRDPGASPNLATYNVM 271
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G K +I +Y+S I L NG +A+ +++ + K N+ N +++ +
Sbjct: 299 MQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKM 358
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + KLFD I + L P+A+T+NT+
Sbjct: 359 IKEARKLFDDIAEQDLVPNAITFNTM 384
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 23 GNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTY 82
GN AL++ + E + NV N+++ + GK E + +L +++ + GL P+ TY
Sbjct: 497 GNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTY 556
Query: 83 NTV 85
+ V
Sbjct: 557 DVV 559
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
++++ I K+ N L A + + + K N+ N +++ L NGK + ++ L+DK+
Sbjct: 275 TFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKM 334
Query: 71 KQSGLTPDAVTYNTV 85
GL P+ VT+N +
Sbjct: 335 VGLGLKPNIVTFNAL 349
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 43/78 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++S+Y+ I L +N N A ++ N + + K +V N+++ ++G+ + KL
Sbjct: 412 NVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLL 471
Query: 68 DKIKQSGLTPDAVTYNTV 85
++ G+ P+ VTYNT+
Sbjct: 472 GEMLNVGVKPNHVTYNTL 489
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
++++ I K G + ++NS+ DE NV N +++ L RN ++ KL +++
Sbjct: 380 TFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEM 439
Query: 71 KQSGLTPDAVTYNTV 85
+ L D VTYN +
Sbjct: 440 ENYELKADVVTYNIL 454
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
+Q +G K S++S + + L K + + +Y + + N+ N+ ++ L + GK
Sbjct: 156 VQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGK 215
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + + IK G +P+ VTYNT+
Sbjct: 216 LNKAEDVIEDIKAWGFSPNIVTYNTL 241
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 44/75 (58%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YSS +K K G+S KA+ ++ + + + NV C+++L+ L +G+ +L ++ +
Sbjct: 421 TYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHM 480
Query: 71 KQSGLTPDAVTYNTV 85
GL PD V Y+++
Sbjct: 481 LGEGLKPDVVAYSSM 495
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 39/72 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y + I L K + + I S+ + K N +I + ++S L + GK E++++L+ ++
Sbjct: 316 TYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEM 375
Query: 71 KQSGLTPDAVTY 82
+ G P+ V Y
Sbjct: 376 AEKGCKPNVVVY 387
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G K + YSS I L K G S A+ ++ + ++ K NV + + L R+ K
Sbjct: 340 MEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEK 399
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
+ + + ++ G P+A TY+++ +
Sbjct: 400 PDEAEDILQEMLSKGFLPNAFTYSSLMK 427
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +YS+ + L K +A+ + + + E N N+++ L +NG + KL D
Sbjct: 209 VFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVD 268
Query: 69 KIKQSGLTPDAVTYNTV 85
+ G P+ VTYNT+
Sbjct: 269 NMFLKGCVPNEVTYNTL 285
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+++ I L KNG+ +A ++ +++ + N N ++ L GK + +L L +K+
Sbjct: 246 TFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKM 305
Query: 71 KQSGLTPDAVTYNTV 85
S P+ VTY T+
Sbjct: 306 VSSKCVPNQVTYGTI 320
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 44/75 (58%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YSS +K K G+S KA+ ++ + + + NV C+++L+ L +G+ +L ++ +
Sbjct: 445 TYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHM 504
Query: 71 KQSGLTPDAVTYNTV 85
GL PD V Y+++
Sbjct: 505 LGEGLKPDVVAYSSM 519
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 39/72 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y + I L K + + I S+ + K N +I + ++S L + GK E++++L+ ++
Sbjct: 340 TYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEM 399
Query: 71 KQSGLTPDAVTY 82
+ G P+ V Y
Sbjct: 400 AEKGCKPNVVVY 411
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G K + YSS I L K G S A+ ++ + ++ K NV + + L R+ K
Sbjct: 364 MEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEK 423
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
+ + + ++ G P+A TY+++ +
Sbjct: 424 PDEAEDILQEMLSKGFLPNAFTYSSLMK 451
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +YS+ + L K +A+ + + + E N N+++ L +NG + KL D
Sbjct: 233 VFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVD 292
Query: 69 KIKQSGLTPDAVTYNTV 85
+ G P+ VTYNT+
Sbjct: 293 NMFLKGCVPNEVTYNTL 309
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+++ I L KNG+ +A ++ +++ + N N ++ L GK + +L L +K+
Sbjct: 270 TFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKM 329
Query: 71 KQSGLTPDAVTYNTV 85
S P+ VTY T+
Sbjct: 330 VSSKCVPNQVTYGTI 344
>gi|357115308|ref|XP_003559432.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Brachypodium distachyon]
Length = 570
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++HG S+ +Y+S I+ + I N + + + NV +++ L + G+
Sbjct: 290 MEEHGFSPSVITYTSLIEAYCMEKDFQTVYAILNEMCSKGCRPNVITYTIVMHALGKAGR 349
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +L +FDK+K+ G PDA YN++
Sbjct: 350 TQEALDVFDKVKRDGCVPDASFYNSI 375
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ ++ +Y+ + LGK G + +AL++++ + + + N I+ L R G+ E +
Sbjct: 331 RPNVITYTIVMHALGKAGRTQEALDVFDKVKRDGCVPDASFYNSIIYILGRAGRLEDANS 390
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS--DH 90
+FD++ ++G+ P +NT+ + DH
Sbjct: 391 VFDEMCRTGIPPTVAIFNTMISAACDH 417
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKV----NVFICNLILSCLVRNGKFESSLK 65
S Y+S I LG+ G LE NS+ DE + V I N ++S + + E++LK
Sbjct: 370 SFYNSIIYILGRAGR----LEDANSVFDEMCRTGIPPTVAIFNTMISAACDHSQAENALK 425
Query: 66 LFDKIKQSGLTPDAVTY 82
+ K+++ PD TY
Sbjct: 426 ILVKMEEQSCKPDIKTY 442
>gi|168062855|ref|XP_001783392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665090|gb|EDQ51786.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 540
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+Q G + ++ +YS+ I GK G +A +++++ + K N+ + N +L + G+
Sbjct: 330 MRQLGFRRNVVAYSTLIDMYGKVGKLQEATRLFSTMKQQGCKGNLIVYNTMLDMYGKAGR 389
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +L ++K S L PD VTY T+
Sbjct: 390 INDAERLMAELKDSKLVPDTVTYTTL 415
>gi|147779268|emb|CAN70089.1| hypothetical protein VITISV_038171 [Vitis vinifera]
Length = 838
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 46/83 (55%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ S ++Y+ I GK S AL++++ + + K N+ +++ R G E + +
Sbjct: 200 QPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEE 259
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
+F++++++GL PD YN + ++
Sbjct: 260 IFEQLQEAGLEPDVYAYNALMEA 282
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 39/81 (48%)
Query: 3 QHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFES 62
Q K +I ++++ + + G KA EI+ + + + +V+ N ++ R G
Sbjct: 232 QKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYG 291
Query: 63 SLKLFDKIKQSGLTPDAVTYN 83
+ ++F ++ G PD +YN
Sbjct: 292 AAEIFSLMQHMGCEPDRASYN 312
>gi|255580313|ref|XP_002530985.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529437|gb|EEF31397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 753
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 44/78 (56%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
SI SY + K + + G + A ++N + ++ + N++L + + E++++ +
Sbjct: 211 SIKSYDALFKVILRRGRYMMAKRVFNKMLNDGIQPTRHTYNIMLWGFFLSLRLETAMRFY 270
Query: 68 DKIKQSGLTPDAVTYNTV 85
D +K G++PD VTYNT+
Sbjct: 271 DDMKNRGISPDVVTYNTM 288
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 48/84 (57%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
++H ++ +YS+ I K G +A+EI+ + +V + + ++ L +NG
Sbjct: 507 REHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVG 566
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
S++ L D++ + G++P+ VTYN++
Sbjct: 567 SAVSLIDEMTKEGISPNVVTYNSI 590
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNG-KFESSLKL 66
++ ++S+ I G++G +A+ ++NS+ + + N+ N ++ + G +F+ K
Sbjct: 267 TVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKF 326
Query: 67 FDKIKQSGLTPDAVTYNTV 85
FD+++++G+ PD +T+N++
Sbjct: 327 FDEMQRNGVQPDRITFNSL 345
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ + K G S +AL+I + K +V N +L + GK++ K+F ++
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM 505
Query: 71 KQSGLTPDAVTYNTV 85
K+ + P+ +TY+T+
Sbjct: 506 KREHVLPNLLTYSTL 520
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 38/73 (52%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
S+ I LG+ G A I+ + V+ + ++S R+G E ++ +F+ +K+
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 73 SGLTPDAVTYNTV 85
GL P+ VTYN V
Sbjct: 297 YGLRPNLVTYNAV 309
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 40/77 (51%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ SY++ + + K G A EI + + NV + ++ + G+F+ +L LF
Sbjct: 374 VFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFG 433
Query: 69 KIKQSGLTPDAVTYNTV 85
+++ G+ D V+YNT+
Sbjct: 434 EMRYLGIALDRVSYNTL 450
Score = 34.3 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKAL-EIYNSITDESDKVNVFICNLILSCLVRNG 58
M+++G + ++ +Y++ I GK G K + + ++ + + + N +L+ R G
Sbjct: 294 MKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG 353
Query: 59 KFESSLKLFDKIKQSGLTPDAVTYNTV 85
+E++ LFD++ + D +YNT+
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTL 380
>gi|302833221|ref|XP_002948174.1| hypothetical protein VOLCADRAFT_116752 [Volvox carteri f.
nagariensis]
gi|300266394|gb|EFJ50581.1| hypothetical protein VOLCADRAFT_116752 [Volvox carteri f.
nagariensis]
Length = 1001
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 45/85 (52%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
++Q+ S+ +YSS I K G AL I+N + + N N +++ + G++
Sbjct: 311 LRQNMDRSVITYSSLISACEKAGQWETALRIFNEMQQDKCVPNTVTYNSLVTACAQGGQW 370
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
E + ++F+++ G TPD VTY +
Sbjct: 371 EKAAEVFEQMNAHGCTPDVVTYTAL 395
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 47/76 (61%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y++ I GK KALE+Y + ++ +V + ++S + G++E++L++F++
Sbjct: 285 TTYNALISAYGKTTQLGKALEVYQEMLRQNMDRSVITYSSLISACEKAGQWETALRIFNE 344
Query: 70 IKQSGLTPDAVTYNTV 85
++Q P+ VTYN++
Sbjct: 345 MQQDKCVPNTVTYNSL 360
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 37/75 (49%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S + + G KA E++ + +V ++S R G+++ +L+ F K+
Sbjct: 356 TYNSLVTACAQGGQWEKAAEVFEQMNAHGCTPDVVTYTALISAYERGGQWQKALQAFHKM 415
Query: 71 KQSGLTPDAVTYNTV 85
G PDA+ YN +
Sbjct: 416 CVQGCKPDAIVYNAI 430
Score = 39.3 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 42/78 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y++ + K G AL+IYNS+ + NV N ++ + G++E ++ +
Sbjct: 178 NVHTYTALMNVCIKCGKLPLALDIYNSMRAVNCMPNVVTYNTLVDVYGKLGQWERAIHVL 237
Query: 68 DKIKQSGLTPDAVTYNTV 85
D +K G+ P TYNT+
Sbjct: 238 DVMKHEGVEPVLRTYNTL 255
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 39/77 (50%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ SY++ I + +ALE+ + + + NV +++ ++ GK +L +++
Sbjct: 144 VYSYTATISLCIHGQDVDRALELMQEMRSRNIERNVHTYTALMNVCIKCGKLPLALDIYN 203
Query: 69 KIKQSGLTPDAVTYNTV 85
++ P+ VTYNT+
Sbjct: 204 SMRAVNCMPNVVTYNTL 220
>gi|125532120|gb|EAY78685.1| hypothetical protein OsI_33787 [Oryza sativa Indica Group]
Length = 493
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
+++HG +I +S + K G ++ALE+++++ ES +V I N ++ L +G
Sbjct: 226 LEEHGFPLNIRLATSLVDMYAKCGAIVEALEVFHAVPVES--TDVLIWNAVIGGLAVHGM 283
Query: 60 FESSLKLFDKIKQSGLTPDAVTY 82
SL++F K++ +G+ PD +TY
Sbjct: 284 SRESLQMFQKMEHAGVVPDEITY 306
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I + G KA + +N + +++ K +V CN +L L + G E +LKLF+
Sbjct: 549 TYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTW 608
Query: 71 KQSGLTPDAVTYNTVYQS 88
G DAV+YNT+ S
Sbjct: 609 ISKGKDVDAVSYNTIILS 626
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ I ++G+S + ++ + K N N+++ V+ GK + K
Sbjct: 337 VVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVR 396
Query: 69 KIKQSGLTPDAVTYNTVYQSDHITW 93
K+++SG PD VTYNT+ I+W
Sbjct: 397 KMEESGCLPDIVTYNTL-----ISW 416
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 43/75 (57%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY + I K+ + +AL +++ + ++ ++ N +++ L + GK ++ D++
Sbjct: 479 SYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDEL 538
Query: 71 KQSGLTPDAVTYNTV 85
+SGL PD +TYNT+
Sbjct: 539 LESGLVPDEITYNTI 553
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 45/85 (52%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
++++ K + + ++ + L K G KAL+++N+ + V+ N I+ L + +F
Sbjct: 574 VEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRF 633
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+ L +++++ L PD TYN +
Sbjct: 634 GEAFDLLEEMEEKKLGPDCYTYNAI 658
>gi|302768647|ref|XP_002967743.1| hypothetical protein SELMODRAFT_409004 [Selaginella moellendorffii]
gi|300164481|gb|EFJ31090.1| hypothetical protein SELMODRAFT_409004 [Selaginella moellendorffii]
Length = 704
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 44/73 (60%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I+ G+ + KALE+Y S+T N F +L+L CL G+ + +L+++++
Sbjct: 236 TYNTLIQAAGEAKATEKALELYQSLTKVGLSANSFTFDLLLKCLGSGGRLKVALQVYNEA 295
Query: 71 KQSGLTPDAVTYN 83
+ +G+T TYN
Sbjct: 296 RAAGITLYTSTYN 308
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 44/76 (57%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y+S + K G +AL IY ++ + +++ N ++SC + + + + ++ +
Sbjct: 113 ATYASLMLACRKLGQGERALTIYEAMKQTKEPISIRTYNTLISCCQQALRMDDAFRVKKE 172
Query: 70 IKQSGLTPDAVTYNTV 85
++++G+ PD VTY ++
Sbjct: 173 LEEAGVKPDVVTYTSL 188
>gi|302821405|ref|XP_002992365.1| hypothetical protein SELMODRAFT_430583 [Selaginella moellendorffii]
gi|300139781|gb|EFJ06515.1| hypothetical protein SELMODRAFT_430583 [Selaginella moellendorffii]
Length = 704
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 44/73 (60%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I+ G+ + KALE+Y S+T N F +L+L CL G+ + +L+++++
Sbjct: 236 TYNTLIQAAGEAKATEKALELYQSLTKVGLSANSFTFDLLLKCLGSGGRLKVALQVYNEA 295
Query: 71 KQSGLTPDAVTYN 83
+ +G+T TYN
Sbjct: 296 RAAGITLYTSTYN 308
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 44/76 (57%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y+S + K G +AL IY ++ + +++ N ++SC + + + + ++ +
Sbjct: 113 ATYASLMLACRKLGQGERALTIYEAMKQTKEPISIRTYNTLISCCQQALRMDDAFRVKKE 172
Query: 70 IKQSGLTPDAVTYNTV 85
++++G+ PD VTY ++
Sbjct: 173 LEEAGVKPDVVTYTSL 188
>gi|242058297|ref|XP_002458294.1| hypothetical protein SORBIDRAFT_03g030760 [Sorghum bicolor]
gi|241930269|gb|EES03414.1| hypothetical protein SORBIDRAFT_03g030760 [Sorghum bicolor]
Length = 534
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 46/80 (57%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + SY++ I L + G ALE+++ + + V ++ L R G F+ +LK
Sbjct: 193 KPDVCSYNTIIDGLCRRGRLAAALEMFSEMVGKCIAPTVVTYTTLIHWLAREGCFDDALK 252
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+FD++ + G++P+ VTY+++
Sbjct: 253 IFDEMGRRGVSPNLVTYSSL 272
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 36/72 (50%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +YSS I L K G + ALE+ + + E N + ++ L + ++++
Sbjct: 265 NLVTYSSLIDGLCKGGRAASALELMDRMIKEKKLPNTITYSSVIDGLCKEHMLSEAMEVL 324
Query: 68 DKIKQSGLTPDA 79
D+++ G PDA
Sbjct: 325 DRMRLQGRKPDA 336
>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Vitis vinifera]
Length = 587
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 46/83 (55%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ S ++Y+ I GK S AL++++ + + K N+ +++ R G E + +
Sbjct: 270 QPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEE 329
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
+F++++++GL PD YN + ++
Sbjct: 330 IFEQLQEAGLEPDVYAYNALMEA 352
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 39/81 (48%)
Query: 3 QHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFES 62
Q K +I ++++ + + G KA EI+ + + + +V+ N ++ R G
Sbjct: 302 QKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYG 361
Query: 63 SLKLFDKIKQSGLTPDAVTYN 83
+ ++F ++ G PD +YN
Sbjct: 362 AAEIFSLMQHMGCEPDRASYN 382
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 47/80 (58%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K I +Y+S I+ L ++ AL I++ I D +V+V + N+++ L GK + +
Sbjct: 541 KPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFC 600
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
++ ++K+ +P+ VTYNT+
Sbjct: 601 IYLEMKEKNCSPNLVTYNTL 620
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ SYSS I K+G + A E+Y ++ + K N + N +++ R K ++K++
Sbjct: 439 VFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYI 498
Query: 69 KIKQSGLTPDAVTYNTV 85
++ +G P +TYNT+
Sbjct: 499 EMTSNGCCPTIITYNTL 515
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK- 69
+YS+ + L K+ AL++ + + + + + N +LS R G FE ++K++++
Sbjct: 195 TYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQL 254
Query: 70 IKQSGLTPDAVTYNTV 85
++ G +P+ TY +
Sbjct: 255 VRDPGASPNLATYKVM 270
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
N+ N+IL L G + ++ LF +++ G+ PD VTY+T+
Sbjct: 157 NLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTL 199
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 41/77 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
++ I+F + G +A+++ +T+ N +CN++++ + + G+ + + K + +
Sbjct: 284 TFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNM 343
Query: 71 KQSGLTPDAVTYNTVYQ 87
G PD ++Y TV +
Sbjct: 344 GSYGCNPDTISYTTVLK 360
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I+ L G AL + + + + NV ++L + +N FE ++ + D++
Sbjct: 144 TYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEM 203
Query: 71 KQSGLTPDAVTYNTV 85
+ G TP+ VTYN +
Sbjct: 204 RAKGCTPNIVTYNVI 218
Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 44/82 (53%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ ++ +Y+ ++ + KN +A+ + + + + N+ N+I++ + R G+ + +
Sbjct: 174 QPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARD 233
Query: 66 LFDKIKQSGLTPDAVTYNTVYQ 87
L +++ G PD V+Y T+ +
Sbjct: 234 LLNRLFSYGCQPDTVSYTTLLK 255
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 56/125 (44%), Gaps = 35/125 (28%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKV----------------- 42
MQ+HG T + +Y++ + G+ ALE++ S+ + + +
Sbjct: 413 MQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERLDA 472
Query: 43 ---------------NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
NV N++++ + G + +++L +++ + G TP+ +TYNT++
Sbjct: 473 AAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLF- 531
Query: 88 SDHIT 92
D IT
Sbjct: 532 -DGIT 535
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 47.8 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILS--CLVRNGKFESS 63
+ I +SS I L K+G + A +I++ TD ++ V N ++ CLV GK + +
Sbjct: 543 RPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLV--GKMDKA 600
Query: 64 LKLFDKIKQSGLTPDAVTYNTV 85
K+ D ++ G+ PD VTYNT+
Sbjct: 601 FKILDAMEVVGVEPDIVTYNTL 622
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 40/80 (50%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K I SY + + G + ++NS+ N + +++ + G + ++
Sbjct: 402 KPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAML 461
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F +++Q G++PD VTY+TV
Sbjct: 462 IFTEMQQQGVSPDVVTYSTV 481
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 2 QQHGKTS--ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
+Q G S + +YS+ I G + KA +++ +T + K +V NLI+ L +
Sbjct: 256 KQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARA 315
Query: 60 FESSLKLFDKIKQSGLTPDAVTYN 83
+ + + ++ G PD VTY+
Sbjct: 316 MDKAELVLRQMTTDGAQPDTVTYS 339
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 35/75 (46%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS I G +A +++ + N+ CN L+ L ++G+ + + + FD +
Sbjct: 337 TYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSM 396
Query: 71 KQSGLTPDAVTYNTV 85
G PD +Y T+
Sbjct: 397 TAKGHKPDIFSYCTL 411
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 18 FLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTP 77
+GK + K L+ + E D V N +L +NG+ L LF ++++ G+ P
Sbjct: 593 LVGKMDKAFKILDAMEVVGVEPDIVTY---NTLLDGYFKNGRINDGLTLFREMQRKGVKP 649
Query: 78 DAVTY 82
+ VTY
Sbjct: 650 NTVTY 654
>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
Length = 625
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 46/83 (55%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ S ++Y+ I GK S AL++++ + + K N+ +++ R G E + +
Sbjct: 308 QPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEE 367
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
+F++++++GL PD YN + ++
Sbjct: 368 IFEQLQEAGLEPDVYAYNALMEA 390
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 39/81 (48%)
Query: 3 QHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFES 62
Q K +I ++++ + + G KA EI+ + + + +V+ N ++ R G
Sbjct: 340 QKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYG 399
Query: 63 SLKLFDKIKQSGLTPDAVTYN 83
+ ++F ++ G PD +YN
Sbjct: 400 AAEIFSLMQHMGCEPDRASYN 420
>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
+AL++++ + E+ NVFICN ILS L + GK + + +L K++ G+ P+ V+YN V
Sbjct: 426 EALKLFDE-SFETGLANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNV 483
Score = 40.8 bits (94), Expect = 0.093, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 46/80 (57%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + +Y++ I L K GN + A ++Y + + + +I++ L + G+F +K
Sbjct: 720 RCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVK 779
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F+++K++ +TP+ + YN V
Sbjct: 780 MFEEMKKNNVTPNVLIYNAV 799
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 38/74 (51%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ + L K G +K ++++ + + NV I N +++ R G + + +L D++
Sbjct: 761 YTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEML 820
Query: 72 QSGLTPDAVTYNTV 85
G+ PD T++ +
Sbjct: 821 DKGILPDGATFDIL 834
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G + S ++S I+ KNG KALE Y + +VF + I+ ++ K
Sbjct: 364 MENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQK 423
Query: 60 FESSLKLFDKIKQSGL 75
E +LKLFD+ ++GL
Sbjct: 424 HEEALKLFDESFETGL 439
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 36/67 (53%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
KN + AL+++ + +E N ++++ +NG+ E +L+ + K++ GLTP
Sbjct: 350 KNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVF 409
Query: 81 TYNTVYQ 87
+T+ Q
Sbjct: 410 HVHTIIQ 416
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 41/78 (52%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+S + L KN +ALE+ + + ++ K+++ ++ + ES+ LF
Sbjct: 617 NVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALF 676
Query: 68 DKIKQSGLTPDAVTYNTV 85
++ + GL P YN++
Sbjct: 677 SELLEEGLNPSQPVYNSL 694
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 41/80 (51%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S +Y+S I K GN A+ + + + +NV +++ +N S+L LF
Sbjct: 302 SQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLF 361
Query: 68 DKIKQSGLTPDAVTYNTVYQ 87
K++ G +P++VT++ + +
Sbjct: 362 YKMENEGPSPNSVTFSVLIE 381
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 19 LGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPD 78
L K+GN + +N + +VF N+++ L + G E+S +LF ++++ GL+PD
Sbjct: 205 LSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPD 264
Query: 79 AVTYNTV 85
VTYN++
Sbjct: 265 VVTYNSL 271
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+S I GK G+ + ++N + D ++ N +++C + K + + F
Sbjct: 265 VVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFS 324
Query: 69 KIKQSGLTPDAVTYNTV 85
++K +GL P+ VTY+T+
Sbjct: 325 EMKNNGLKPNVVTYSTL 341
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 37/76 (48%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +Y+ I +L K G+ + ++ + + +V N ++ + G E LF
Sbjct: 229 SVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLF 288
Query: 68 DKIKQSGLTPDAVTYN 83
+++K G PD +TYN
Sbjct: 289 NEMKDVGCVPDIITYN 304
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 40/81 (49%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y+ I K +A E ++ + + K NV + ++ + G + ++KL
Sbjct: 300 IITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLX 359
Query: 69 KIKQSGLTPDAVTYNTVYQSD 89
++++GL P+ TY ++ ++
Sbjct: 360 DMRRTGLLPNEFTYTSLIDAN 380
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 23 GNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTY 82
G KA + +N + + S K ++F CN++L L R G E L LF+ G D VTY
Sbjct: 575 GAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTY 634
Query: 83 NTVYQS 88
N + S
Sbjct: 635 NIIISS 640
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
+A E+ +T + +V+ N ++ L GK + +++L DK++ L PD VTYNT+
Sbjct: 299 EAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTL 357
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M +H K I + + ++ L + G K L ++N+ + ++ N+I+S + +
Sbjct: 587 MVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERR 646
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E + L +++ L PD TYN +
Sbjct: 647 LEDAFDLMTEMEGKNLEPDRYTYNAI 672
>gi|296088922|emb|CBI38482.3| unnamed protein product [Vitis vinifera]
Length = 368
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGL 75
I L + GN ALE + ++ N +++ L + G+ + +L LFDK++ G+
Sbjct: 252 INGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGI 311
Query: 76 TPDAVTYNTVYQSDHITW 93
PDA+TYNT+ I+W
Sbjct: 312 CPDAITYNTL-----ISW 324
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 23 GNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTY 82
GN K L ++ + + N CN++++ L R G + +L+ + GLTPD VTY
Sbjct: 224 GNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTY 283
Query: 83 NTV 85
N++
Sbjct: 284 NSL 286
Score = 34.3 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 37/74 (50%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y+S I L K G + +AL +++ + E + N ++S + G F+ + L
Sbjct: 280 IVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLS 339
Query: 69 KIKQSGLTPDAVTY 82
+ SG P+ VT+
Sbjct: 340 RGVDSGFIPNEVTW 353
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+HG I+SY+ + L K G +A+E+ +++ + + +V N +L L G
Sbjct: 537 MQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGM 596
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
FE + KL +++ G D +TY+++ ++
Sbjct: 597 FEEAAKLMEEMNTLGFEYDLITYSSILEA 625
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 41/81 (50%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
G +S Y+ IK LGK G A+ +++ + +V+ N ++S L R G + +L
Sbjct: 472 GSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEAL 531
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
++++ G PD +YN +
Sbjct: 532 STMRRMQEHGCIPDINSYNII 552
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 46/87 (52%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ + + +Y+ I+ LGK G +A + + E + + + N +++ L + G+ +
Sbjct: 293 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLD 352
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTVYQS 88
++KLF ++ P VTYNT+ ++
Sbjct: 353 DAMKLFQEMGTLRCIPSVVTYNTIIKA 379
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ + L + G +AL + + ++ N+IL+ L + G ++++
Sbjct: 511 VYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLS 570
Query: 69 KIKQSGLTPDAVTYNTV 85
+KQS + PD V+YNTV
Sbjct: 571 NMKQSTVRPDVVSYNTV 587
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 38/76 (50%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y S I LGK A E++ + + + + +++ L + G+ + ++ +FD+
Sbjct: 442 AAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDE 501
Query: 70 IKQSGLTPDAVTYNTV 85
+ + G PD YN +
Sbjct: 502 MNKLGCAPDVYAYNAL 517
>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Glycine max]
Length = 1012
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +YSS + K GN AL + +T++ + +V N + L+R GK+E +F
Sbjct: 516 VFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEPK-SVFS 574
Query: 69 KIKQSGLTPDAVTYNTV 85
++ + GLTPD VTYN+V
Sbjct: 575 RMIELGLTPDCVTYNSV 591
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ I L K+G ++A + + +++ +C ++ L + GK + + ++F I
Sbjct: 308 SYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTI 367
Query: 71 KQSGLTPDAVTYNTV 85
+ L P+ VTY +
Sbjct: 368 LKLNLVPNCVTYTAL 382
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 42/82 (51%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
++H ++ ++SS I K G KA+E+ + + NVF+ ++L R G+ E
Sbjct: 404 KEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHE 463
Query: 62 SSLKLFDKIKQSGLTPDAVTYN 83
++ + ++K GL + + ++
Sbjct: 464 AAAGFYKEMKSWGLEENNIIFD 485
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 36/75 (48%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y++ I+ + KA Y+ + N+ N +L L NG + KL
Sbjct: 725 IVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVS 784
Query: 69 KIKQSGLTPDAVTYN 83
++++ GL P+A TYN
Sbjct: 785 EMRERGLVPNATTYN 799
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G + ++ +++ I+ + G AL + + + S ++ + N+ + C + GK
Sbjct: 221 MQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGK 280
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ S K F ++K GL PD VTY ++
Sbjct: 281 VDMSWKFFHEMKSHGLMPDDVTYTSM 306
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 43/85 (50%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
M++ ++ +Y+ I L + G ALEI + + NV N+++ L + K
Sbjct: 396 MKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKL 455
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
E + +F+ + TP+AVT++++
Sbjct: 456 EEACSIFEGMDDKVCTPNAVTFSSL 480
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 34/74 (45%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+S I+ K G +IY + ++ + N + C+ + G+ E LF +I
Sbjct: 512 YTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREIN 571
Query: 72 QSGLTPDAVTYNTV 85
G PDA +Y+ +
Sbjct: 572 AHGFIPDARSYSIL 585
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 40/78 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + S+Y+ I L + L +++ + + +VNV + ++ R G+ +++L
Sbjct: 192 RPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALS 251
Query: 66 LFDKIKQSGLTPDAVTYN 83
L D++K + L D V YN
Sbjct: 252 LLDEMKSNSLDADIVLYN 269
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 37/80 (46%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ YSS I GK G +A I + + NV+ N +L LV+ + +L
Sbjct: 681 KLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALI 740
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
F +K P+ +TY+ +
Sbjct: 741 CFQSMKDLKCPPNQITYSIL 760
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SYS I L K G + + E++ ++ ++ ++ N ++ ++GK + +L +++
Sbjct: 581 SYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEM 640
Query: 71 KQSGLTPDAVTYNTV 85
K G P VTY +V
Sbjct: 641 KVKGHPPTVVTYGSV 655
>gi|224117122|ref|XP_002317482.1| predicted protein [Populus trichocarpa]
gi|222860547|gb|EEE98094.1| predicted protein [Populus trichocarpa]
Length = 433
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 43/80 (53%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y ++IK L G A+++Y ++ K +V ICN ++ L + +L
Sbjct: 173 KPDVFTYGTFIKALTNKGKLGTAMKLYEAMWKMQCKPDVVICNCVIDALCFKKRVPEALA 232
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F+ +K+ G P+ TYN++
Sbjct: 233 VFEGMKERGCIPNVATYNSL 252
>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g54980, mitochondrial; Flags: Precursor
gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 851
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 35/120 (29%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSIT----------------------- 36
M++ G + S ++S I++ KNG KALE Y +
Sbjct: 365 MEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQK 424
Query: 37 --------DESDKV---NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
DES + NVF+CN ILS L + GK + + +L K++ G+ P+ V+YN V
Sbjct: 425 HEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNV 484
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 47/80 (58%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + +Y++ I L K+GN + A E+Y + + I +I++ L + G+F +K
Sbjct: 721 RCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVK 780
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F+++K++ +TP+ + YN V
Sbjct: 781 MFEEMKKNNVTPNVLIYNAV 800
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 38/74 (51%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ + L K G +K ++++ + + NV I N +++ R G + + +L D++
Sbjct: 762 YTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEML 821
Query: 72 QSGLTPDAVTYNTV 85
G+ PD T++ +
Sbjct: 822 DKGILPDGATFDIL 835
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 44/80 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S +Y+S I K GN A+ + + + + +NV +++ +N S+L LF
Sbjct: 303 SQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLF 362
Query: 68 DKIKQSGLTPDAVTYNTVYQ 87
DK+++ G +P++VT++ + +
Sbjct: 363 DKMEKEGPSPNSVTFSVLIE 382
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 36/67 (53%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
KN + + AL +++ + E N ++++ +NG+ E +L+ + K++ GLTP
Sbjct: 351 KNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVF 410
Query: 81 TYNTVYQ 87
+T+ Q
Sbjct: 411 HVHTIIQ 417
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 41/78 (52%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+S + L KN +ALE+ + + ++ K+++ ++ + ES+ LF
Sbjct: 618 NVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALF 677
Query: 68 DKIKQSGLTPDAVTYNTV 85
++ + GL P YN++
Sbjct: 678 SELLEEGLNPSQPIYNSL 695
>gi|326493764|dbj|BAJ85344.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 730
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 46/77 (59%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
S++ ++ LG+ G + LE+ + DE + +VF+ ++ +VR G E +++++++
Sbjct: 270 SFAIIVRALGQEGKPERILEMIGRMRDEVCRPDVFVYTTLVKTMVRRGHMEGCIRVWEEM 329
Query: 71 KQSGLTPDAVTYNTVYQ 87
+ G+ PD++ Y T+ +
Sbjct: 330 GRDGVEPDSMAYATMVE 346
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 28/45 (62%)
Query: 44 VFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
V +CN +L L G E +LKLFD++ +SG+ P V++ + ++
Sbjct: 233 VHVCNRVLGALTAAGYVEDALKLFDEMAESGIRPMPVSFAIIVRA 277
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 46/78 (58%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ ++S+ I L + G KALE++ S+ + K N + +++ L R K + +LF
Sbjct: 222 NVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELF 281
Query: 68 DKIKQSGLTPDAVTYNTV 85
+K+ Q+ + PDAV YN++
Sbjct: 282 EKMTQACIPPDAVAYNSL 299
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I L +GN+ A ++ + + D++ NVF + I+ LV+ K E S K+ +++
Sbjct: 83 TYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEM 142
Query: 71 KQSGLTPDAVTYNTVYQ 87
+G PD +N V Q
Sbjct: 143 MAAGCNPDVFAFNGVMQ 159
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y ++ L K G +ALE++ ++ ES ++ N++++ G+F +L LF +
Sbjct: 12 AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71
Query: 71 K-QSGLTPDAVTYNTV 85
K + + PD TYNT+
Sbjct: 72 KREKRVEPDRWTYNTL 87
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 39/78 (50%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +YSS IK L K ++ ++ + +VF N ++ R+ E + +++
Sbjct: 115 NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVY 174
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ +SG PD V+Y+ +
Sbjct: 175 QHMVESGYKPDNVSYHIL 192
Score = 34.7 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +++ ++ ++ N KA E+Y + + K + ++++ L + GK + SLK+
Sbjct: 151 VFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILS 210
Query: 69 K--IKQSGLTPDAVTYNTV 85
+ ++ +G P+ +T++T+
Sbjct: 211 EMAMRAAGYVPNVITFSTL 229
>gi|224142151|ref|XP_002324422.1| predicted protein [Populus trichocarpa]
gi|222865856|gb|EEF02987.1| predicted protein [Populus trichocarpa]
Length = 453
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ S + + L G +A I+NS+ DE K + +++ L R F+S L+L
Sbjct: 13 VRSRTKLMNVLIGKGKPREAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLIS 72
Query: 69 KIKQSGLTPDAVTYNTV 85
K++++G+ PD++ +N++
Sbjct: 73 KVEENGMKPDSILFNSI 89
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G K + S++++ IK G G + +AL++ + D K N N+++
Sbjct: 109 MKESGCKPTTSTFNTLIKGYGNAGKTEEALKLLEFLQDGGVKPNQRTYNILVRAWCNKEN 168
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
E + + K+ SG+ PDAVTYNT+ ++
Sbjct: 169 MEEAWNMVYKMVASGMQPDAVTYNTLARA 197
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 40/77 (51%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I ++S K + G KA I S+ NV IC ++S GK E ++K+++
Sbjct: 328 IHAFSILAKGYVRAGEPEKAESILTSMRKYGVHPNVVICTTVISGWCSAGKMEHAMKVYE 387
Query: 69 KIKQSGLTPDAVTYNTV 85
K+ + G++P+ TY T+
Sbjct: 388 KMCEIGVSPNLKTYETL 404
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 44/85 (51%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
M + K ++ +Y++ + L + L + + + + K + + N I++ +G
Sbjct: 40 MDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEENGMKPDSILFNSIINAFSESGNM 99
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++KLF K+K+SG P T+NT+
Sbjct: 100 KEAMKLFRKMKESGCKPTTSTFNTL 124
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 40/77 (51%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
++S I ++GN +A++++ + + K N ++ GK E +LKL + ++
Sbjct: 86 FNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEALKLLEFLQ 145
Query: 72 QSGLTPDAVTYNTVYQS 88
G+ P+ TYN + ++
Sbjct: 146 DGGVKPNQRTYNILVRA 162
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G + +S+Y++ + L KNG A IY + + +N+ + ++++ L + G
Sbjct: 430 MKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGF 489
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
F+ +L L +++ +G PDAVTY T+
Sbjct: 490 FDEALSLLSQMEDNGCMPDAVTYETL 515
Score = 41.2 bits (95), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YSS I L K+G ++ + I + N+ N +L+ L +N + + ++ L K+
Sbjct: 371 TYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKM 430
Query: 71 KQSGLTPDAVTYNTV 85
K G+ PD TY T+
Sbjct: 431 KDEGIQPDMSTYTTL 445
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Query: 1 MQQHGKTSISSYSSYIK--FLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNG 58
++Q + ++ +Y+S + FL K N KA ++N+I+ NV +++++ L +N
Sbjct: 291 IKQGVEPNVVTYTSLMDGYFLVKEVN--KAKHVFNTISLRGVTPNVHSYSVMINGLCKNK 348
Query: 59 KFESSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++KLF ++ +TP+ VTY+++
Sbjct: 349 MVDEAVKLFKEMHLKNMTPNTVTYSSL 375
>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M HG T ++ +I + GK+G SLKAL+ Y + + +V N +L L + G+
Sbjct: 407 MNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGR 466
Query: 60 FESSLKLFDKIKQSGLTPDAVTY 82
+ ++F ++K G++PD +TY
Sbjct: 467 LGMAKRVFHELKAMGISPDNITY 489
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + LG+ G + +++ + S N+ N +L CL +NG+ +L + +
Sbjct: 558 TYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSM 617
Query: 71 KQSGLTPDAVTYNTV 85
+G PD +YNTV
Sbjct: 618 TMNGCMPDLSSYNTV 632
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 46/85 (54%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
++Q I SY+ I L +G L + +TD + ++ NL++ L ++G+
Sbjct: 933 VEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRL 992
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
E +L L++ +++ G+ P+ TYN++
Sbjct: 993 EEALSLYNDMEKKGIAPNLYTYNSL 1017
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 14 SYIKFL---GKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YI L G +G+S EI+N++ + NV + L + G+ + +L +FD++
Sbjct: 313 TYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEM 372
Query: 71 KQSGLTPDAVTYNTV 85
KQ G+ P +YN++
Sbjct: 373 KQKGIIPQQYSYNSL 387
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I LGK+G +AL +YN + + N++ N ++ L + GK + K+++++
Sbjct: 978 TYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEEL 1037
Query: 71 KQSGLTPDAVTYNTV 85
G P+ TYN +
Sbjct: 1038 LAKGWKPNVFTYNAL 1052
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G + ++ SY+ I+ LG+ G +A I + +E K +V +++ L G+
Sbjct: 232 MEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGR 291
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +F K+K S PD VTY T+
Sbjct: 292 LADAKDVFWKMKASDQKPDRVTYITL 317
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ IK K N+ +A++I+ + + +V N ++ L + G+ + K+F ++
Sbjct: 488 TYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYEL 547
Query: 71 KQSGLTPDAVTYNTV 85
K+ L P TYNT+
Sbjct: 548 KEMNLEPTDCTYNTL 562
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G ++ +Y+S I +LGK G + +A ++Y + + K NVF N ++ +G
Sbjct: 1002 MEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGS 1061
Query: 60 FESSLKLFDKIKQSGLTPDAVTY 82
E++ + ++ G P++ TY
Sbjct: 1062 PENAFAAYGRMIVGGCRPNSSTY 1084
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 32/61 (52%)
Query: 23 GNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTY 82
G++ K E++ S+ ++ ++ +++ L +G+ L F ++ GL PD +TY
Sbjct: 920 GDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITY 979
Query: 83 N 83
N
Sbjct: 980 N 980
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 40/77 (51%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ + +S I L K G +A +I+ + + + + N +L+ L R GK + ++L +
Sbjct: 521 VLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLE 580
Query: 69 KIKQSGLTPDAVTYNTV 85
+ + P+ +TYNTV
Sbjct: 581 GMNSNSFPPNIITYNTV 597
>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M HG T ++ +I + GK+G SLKAL+ Y + + +V N +L L + G+
Sbjct: 407 MNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGR 466
Query: 60 FESSLKLFDKIKQSGLTPDAVTY 82
+ ++F ++K G++PD +TY
Sbjct: 467 LGMAKRVFHELKAMGISPDNITY 489
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + LG+ G + +++ + S N+ N +L CL +NG+ +L + +
Sbjct: 558 TYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSM 617
Query: 71 KQSGLTPDAVTYNTV 85
+G PD +YNTV
Sbjct: 618 TMNGCMPDLSSYNTV 632
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 46/85 (54%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
++Q I SY+ I L +G L + +TD + ++ NL++ L ++G+
Sbjct: 933 VEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRL 992
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
E +L L++ +++ G+ P+ TYN++
Sbjct: 993 EEALSLYNDMEKKGIAPNLYTYNSL 1017
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 14 SYIKFL---GKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YI L G +G+S EI+N++ + NV + L + G+ + +L +FD++
Sbjct: 313 TYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEM 372
Query: 71 KQSGLTPDAVTYNTV 85
KQ G+ P +YN++
Sbjct: 373 KQKGIIPQQYSYNSL 387
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I LGK+G +AL +YN + + N++ N ++ L + GK + K+++++
Sbjct: 978 TYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEEL 1037
Query: 71 KQSGLTPDAVTYNTV 85
G P+ TYN +
Sbjct: 1038 LAKGWKPNVFTYNAL 1052
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G + ++ SY+ I+ LG+ G +A I + +E K +V +++ L G+
Sbjct: 232 MEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGR 291
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +F K+K S PD VTY T+
Sbjct: 292 LADAKDVFWKMKASDQKPDRVTYITL 317
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ IK K N+ +A++I+ + + +V N ++ L + G+ + K+F ++
Sbjct: 488 TYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYEL 547
Query: 71 KQSGLTPDAVTYNTV 85
K+ L P TYNT+
Sbjct: 548 KEMNLEPTDCTYNTL 562
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G ++ +Y+S I +LGK G + +A ++Y + + K NVF N ++ +G
Sbjct: 1002 MEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGS 1061
Query: 60 FESSLKLFDKIKQSGLTPDAVTY 82
E++ + ++ G P++ TY
Sbjct: 1062 PENAFAAYGRMIVGGCRPNSSTY 1084
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 32/61 (52%)
Query: 23 GNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTY 82
G++ K E++ S+ ++ ++ +++ L +G+ L F ++ GL PD +TY
Sbjct: 920 GDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITY 979
Query: 83 N 83
N
Sbjct: 980 N 980
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 40/77 (51%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ + +S I L K G +A +I+ + + + + N +L+ L R GK + ++L +
Sbjct: 521 VLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLE 580
Query: 69 KIKQSGLTPDAVTYNTV 85
+ + P+ +TYNTV
Sbjct: 581 GMNSNSFPPNIITYNTV 597
>gi|384500528|gb|EIE91019.1| hypothetical protein RO3G_15730 [Rhizopus delemar RA 99-880]
Length = 947
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 41/64 (64%)
Query: 22 NGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVT 81
N + +AL IY+ +VF N+I+S L + + + LK+F++++Q G++P++VT
Sbjct: 804 NEDCTEALAIYDEAKKNKVAPSVFFYNVIISKLAKARRLDDVLKMFEEMRQVGISPNSVT 863
Query: 82 YNTV 85
Y+TV
Sbjct: 864 YSTV 867
>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
Length = 480
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YSS ++ K GN KA++++ + + + ++ N++LS L R K + +LF +
Sbjct: 135 AYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSM 194
Query: 71 KQSGLTPDAVTYNTV 85
G PD VTYNT+
Sbjct: 195 NSRGCKPDVVTYNTM 209
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVY 86
+A E++ S+ K +V N +++ L + K + ++ L +++KQ ++P VTY T+
Sbjct: 186 EARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLI 245
Query: 87 QSDHI 91
DH+
Sbjct: 246 --DHL 248
>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
Length = 695
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YSS ++ K GN KA++++ + + + ++ N++LS L R K + +LF +
Sbjct: 81 AYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSM 140
Query: 71 KQSGLTPDAVTYNTV 85
G PD VTYNT+
Sbjct: 141 NSRGCKPDVVTYNTM 155
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVY 86
+A E++ S+ K +V N +++ L + K + ++ L +++KQ ++P VTY T+
Sbjct: 132 EARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLI 191
Query: 87 QSDHI 91
DH+
Sbjct: 192 --DHL 194
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 19 LGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPD 78
L K+GN + +N + +VF N+++ L + G E+S +LF ++++ GL+PD
Sbjct: 264 LSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPD 323
Query: 79 AVTYNTV 85
VTYN++
Sbjct: 324 VVTYNSL 330
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+S I GK G+ + ++N + D ++ N +++C + K + + F
Sbjct: 324 VVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFS 383
Query: 69 KIKQSGLTPDAVTYNTV 85
++K +GL P+ VTY+T+
Sbjct: 384 EMKNNGLKPNVVTYSTL 400
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 41/81 (50%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y+ I K +A E ++ + + K NV + ++ + G + ++KLF
Sbjct: 359 IITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFV 418
Query: 69 KIKQSGLTPDAVTYNTVYQSD 89
++++GL P+ TY ++ ++
Sbjct: 419 DMRRTGLLPNEFTYTSLIDAN 439
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 37/76 (48%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +Y+ I +L K G+ + ++ + + +V N ++ + G E LF
Sbjct: 288 SVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLF 347
Query: 68 DKIKQSGLTPDAVTYN 83
+++K G PD +TYN
Sbjct: 348 NEMKDVGCVPDIITYN 363
Score = 34.7 bits (78), Expect = 7.1, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ G + +I +Y I L K G A++ + + + NV + ++ L +N
Sbjct: 595 MQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNC 654
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
ES+ KLFD+++ G+TPD + +
Sbjct: 655 IESAKKLFDEMQCRGMTPDITAFTAL 680
>gi|356574119|ref|XP_003555199.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Glycine max]
Length = 942
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 44/77 (57%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
+S+S I L KN AL ++N + D+ +V I N +++ L + + E S +L +
Sbjct: 433 ASFSIVINGLLKNDQLDLALSLFNDMKQFVDRPSVLIYNNLINSLCDSNRLEESRELLRE 492
Query: 70 IKQSGLTPDAVTYNTVY 86
+K+SG+ P TYN++Y
Sbjct: 493 MKESGVEPTHFTYNSIY 509
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 42/88 (47%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+QQ I SYS+ I L + +AL++++ + +V N+++ L + +
Sbjct: 564 VQQGFLPDIVSYSAAIGGLIQIQELNRALQLFSDLYSRGHCPDVVASNILMRGLCKAYRV 623
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+ KL D+I G P VTYN + S
Sbjct: 624 REAEKLLDEIVVKGFFPSVVTYNLLIDS 651
>gi|255660960|gb|ACU25649.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 376
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ G +YS+ I L K N +AL + N + K NV + N +++ LV KFE
Sbjct: 122 QKGGVLDAFAYSAMINGLCKEANLDRALSVLNDMIKSGCKPNVHVYNTLINGLVGASKFE 181
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
++++F ++ +P +TYNT+
Sbjct: 182 DAIRVFREMGTMHCSPTIITYNTL 205
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 44/81 (54%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+ +YS +K L + +AL+++N +T + K +V + N+++ L GK + +L L+
Sbjct: 233 GVITYSMLMKGLCLDHRVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLY 292
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
+ P+ V++NT+ +
Sbjct: 293 FDMNHWKCAPNLVSHNTLMEG 313
>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
Length = 599
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 40/81 (49%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+ ++Y +K K GN KAL+I + N I +I+ R G F ++ K++
Sbjct: 191 TAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVW 250
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
+ + +GL PD V YN + +
Sbjct: 251 EDMVSAGLKPDIVIYNILVHA 271
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 43/80 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I +Y+S + K GN KALE+++ I + V N +LS L + + E++ +
Sbjct: 296 TIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLML 355
Query: 68 DKIKQSGLTPDAVTYNTVYQ 87
+++ +G+ P+ +Y + +
Sbjct: 356 NEMLANGVVPNERSYTALTE 375
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 47/75 (62%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y + L K+GNS AL+++ + + + K +V ++++ L ++G F+ +L LF+++
Sbjct: 241 TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 300
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ D VTY+++
Sbjct: 301 EMKGIKADVVTYSSL 315
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +Y + L NG KALEI+ + + + I N+I+ + K + + LF
Sbjct: 483 SVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLF 542
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ G+ PD VTYN +
Sbjct: 543 CSLSDKGVKPDVVTYNVM 560
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%)
Query: 28 ALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
A ++ S++D+ K +V N+++ L + G + LF K+K+ G TPD TYN + +
Sbjct: 538 AWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIR 597
Query: 88 S 88
+
Sbjct: 598 A 598
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 45/84 (53%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
+++ K S+ YS I L K+G+ AL ++N + + K +V + ++ L +GK++
Sbjct: 267 ERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWD 326
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
K+ ++ + PD VT++ +
Sbjct: 327 DGAKMLREMIGRNIIPDVVTFSAL 350
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G K + +YSS I L +G ++ + + +V + ++ V+ GK
Sbjct: 300 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 359
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +L++++ G+ PD +TYN++
Sbjct: 360 LLEAKELYNEMITRGIAPDTITYNSL 385
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 36/80 (45%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ ++S+ I K G L+A E+YN + + N ++ + + ++FD
Sbjct: 344 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 403
Query: 69 KIKQSGLTPDAVTYNTVYQS 88
+ G PD VTY+ + S
Sbjct: 404 LMVSKGCEPDIVTYSILINS 423
>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 524
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ +I++Y+ I L K G A I+ + + KV V+ N++++ L G F+ ++
Sbjct: 412 QPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMT 471
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
L +K++ +G TPD VTY T+ ++
Sbjct: 472 LLEKMEDNGCTPDVVTYETIIRA 494
>gi|255080744|ref|XP_002503945.1| predicted protein [Micromonas sp. RCC299]
gi|226519212|gb|ACO65203.1| predicted protein [Micromonas sp. RCC299]
Length = 412
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G +T+ Y++ + K G+ +ALE++ ++ E + N+ +S +R G
Sbjct: 89 MRDQGVETNTIVYNATMSACSKGGDWERALELFETMPREGHDRSTITYNVAMSACMRGGD 148
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNT 84
+E +L+LFD++ + GL D V+ NT
Sbjct: 149 WERALELFDQMAEEGLERDHVSINT 173
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
K G+ K +EI++++ D+ + N + N +S + G +E +L+LF+ + + G +
Sbjct: 75 KKGDWSKCVEIFDAMRDQGVETNTIVYNATMSACSKGGDWERALELFETMPREGHDRSTI 134
Query: 81 TYN 83
TYN
Sbjct: 135 TYN 137
>gi|168028441|ref|XP_001766736.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681945|gb|EDQ68367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 560
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G +Y + + K G A+++Y + + + F ++I+ CL + GK
Sbjct: 128 MQEEGCSPDRVTYCTLVDLHSKAGFHDNAMDMYQKMQQAGFQPDTFTYSVIIHCLGKAGK 187
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+LKLF+++ + G P VTYN +
Sbjct: 188 VSEALKLFEEMVERGFAPSLVTYNII 213
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQQ G + +YS I LGK G +AL+++ + + ++ N+I+ ++G
Sbjct: 163 MQQAGFQPDTFTYSVIIHCLGKAGKVSEALKLFEEMVERGFAPSLVTYNIIIDLQAKSGN 222
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
+ ++KL++ ++ +G PD VTY+ + +
Sbjct: 223 YVMAMKLYNDMQDAGFHPDRVTYSIMME 250
Score = 40.8 bits (94), Expect = 0.090, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 43/78 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +Y+ I K+GN + A+++YN + D + ++++ L + G + + +F
Sbjct: 206 SLVTYNIIIDLQAKSGNYVMAMKLYNDMQDAGFHPDRVTYSIMMEVLGQIGHLQEAELMF 265
Query: 68 DKIKQSGLTPDAVTYNTV 85
++++Q+G PDA Y +
Sbjct: 266 NEMEQAGWVPDAPIYGVM 283
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 44/77 (57%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I SY++ + L +NG A+E+ + + D+ + N ++ L + GK + +L+L D
Sbjct: 376 IVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLD 435
Query: 69 KIKQSGLTPDAVTYNTV 85
++ GL PD +TY+T+
Sbjct: 436 EMTSKGLQPDIITYSTI 452
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ I L K G + +ALE+ + +T + + ++ + I S L R + E +++ F K+
Sbjct: 413 SYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKV 472
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ P A YN +
Sbjct: 473 QDMGIRPTAALYNAI 487
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M Q+G T S SY+ + K KA+E + ++ N +L+ L RNG+
Sbjct: 332 MPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGE 391
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +++L ++K G +P ++YNTV
Sbjct: 392 VDVAIELLHQLKDKGCSPVLISYNTV 417
Score = 37.7 bits (86), Expect = 0.76, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 36/75 (48%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I+ L G + AL + + +V ++L + ++ ++KL D++
Sbjct: 168 TYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEM 227
Query: 71 KQSGLTPDAVTYNTV 85
G PD VTYN V
Sbjct: 228 HDKGCAPDIVTYNVV 242
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 30/46 (65%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
NV N+++S L R G E ++++ +++ Q G TP++++YN + +
Sbjct: 305 NVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHA 350
>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
Length = 601
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
++ +I L K G KA+++ + + + NV N++++CL + G +L L +++
Sbjct: 223 FTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMD 282
Query: 72 QSGLTPDAVTYNTV 85
G+ PD VTYNT+
Sbjct: 283 DKGVAPDVVTYNTL 296
>gi|357138821|ref|XP_003570985.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Brachypodium distachyon]
Length = 613
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 47/87 (54%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
++ +T+ +Y+ I GK+ + A++I+N + K N+ +++ R G E
Sbjct: 285 KERCRTNTETYTLMINVYGKSKQPMSAMKIFNEMQSIGCKANICTYTALVNAFAREGLCE 344
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+ ++F++++Q+G PD YN + ++
Sbjct: 345 KAEEVFEQMQQAGHEPDVYAYNALMEA 371
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+HG S + Y++Y+ L K ++KA+E+Y + E + N L+++ ++ +
Sbjct: 248 MQEHGIPPSATVYNAYLDGLLKARCTVKAVEVYQRMKKERCRTNTETYTLMINVYGKSKQ 307
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
S++K+F++++ G + TY +
Sbjct: 308 PMSAMKIFNEMQSIGCKANICTYTAL 333
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ G K +I +Y++ + + G KA E++ + + +V+ N ++ R G
Sbjct: 318 MQSIGCKANICTYTALVNAFAREGLCEKAEEVFEQMQQAGHEPDVYAYNALMEAYSRAGF 377
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + ++F ++ G PD +YN +
Sbjct: 378 PQGASEIFSLMQHMGCEPDRASYNIL 403
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 43/73 (58%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I S ++++ L +NG ALE++N D+ ++NV I++ +NGK +L+LF
Sbjct: 306 IGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFR 365
Query: 69 KIKQSGLTPDAVT 81
++ G+ P+AVT
Sbjct: 366 DMQAYGVEPNAVT 378
>gi|224088126|ref|XP_002308333.1| predicted protein [Populus trichocarpa]
gi|222854309|gb|EEE91856.1| predicted protein [Populus trichocarpa]
Length = 1048
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+Q G + +I +YS+ I+ N ++A +++S+ + + ++ LSCL R GK
Sbjct: 933 MKQEGCEPTIVTYSALIRGYMDTENVIEAWNVFHSLKTKGPAPDFKTYSMFLSCLCRAGK 992
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVY 86
E +L+L + +G+ P V + TV+
Sbjct: 993 SEEALQLLSDMVDNGIVPSNVNFRTVF 1019
Score = 41.2 bits (95), Expect = 0.070, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 43/81 (53%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
G T +SYS YI+ L + G +AL + + ++ E ++ + ++ L++ G+ E +L
Sbjct: 833 GFTVPASYSLYIRALCRAGMLEEALSLVDQVSTEKTTLDRYTHASLVHGLLQKGRLEEAL 892
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
D +KQ G+ P Y ++
Sbjct: 893 AKVDSMKQVGINPTVHVYTSL 913
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 40/65 (61%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
K G + +ALE ++ + S +V+I N ++ L ++G + ++KLF+ ++ S + PD
Sbjct: 74 KAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIF 133
Query: 81 TYNTV 85
TYNTV
Sbjct: 134 TYNTV 138
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVN---VFICNLILSCLVRNGKFESSLK 65
I +Y++ I L K+GN KA E+ + K V LI + + ++G E +L+
Sbjct: 132 IFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALE 191
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
+ D +K +G PD +TYN++ +
Sbjct: 192 ILDGMKLAGPAPDVITYNSIIHA 214
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 9 ISSYSSYIKFLGKNG---------NSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
+ +Y+S + L K+G + A EI + + +F N++L L+++G
Sbjct: 307 VIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGS 366
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
++ L + G PD VTYNT+
Sbjct: 367 ISKAVSLISDLVARGYVPDVVTYNTL 392
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 48/84 (57%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
++H ++ +YS+ I K G +A+E++ + +V + + ++ L +NG
Sbjct: 507 REHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVG 566
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
S++ L D++ + G++P+ VTYN++
Sbjct: 567 SAVSLIDEMTKEGISPNVVTYNSI 590
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 38/73 (52%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
S+ I LG+ G A I+ + V+ + ++S R+G E ++ +F+ +K+
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 73 SGLTPDAVTYNTV 85
GL P+ VTYN V
Sbjct: 297 YGLRPNLVTYNAV 309
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ + K G S +AL+I + K +V N +L + GK++ K+F ++
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEM 505
Query: 71 KQSGLTPDAVTYNTV 85
K+ + P+ +TY+T+
Sbjct: 506 KREHVLPNLLTYSTL 520
Score = 34.7 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 39/77 (50%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ SY++ + + K G A EI + + NV + ++ + G+F+ +L LF
Sbjct: 374 VFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFG 433
Query: 69 KIKQSGLTPDAVTYNTV 85
+++ + D V+YNT+
Sbjct: 434 EMRYLNIALDRVSYNTL 450
Score = 34.3 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKAL-EIYNSITDESDKVNVFICNLILSCLVRNG 58
M+++G + ++ +Y++ I GK G K + + ++ + + + N +L+ R G
Sbjct: 294 MKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGG 353
Query: 59 KFESSLKLFDKIKQSGLTPDAVTYNTV 85
+E++ LFD++ + D +YNT+
Sbjct: 354 LWEAARNLFDEMSNRRIEQDVFSYNTL 380
>gi|357436523|ref|XP_003588537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477585|gb|AES58788.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 653
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 54/89 (60%), Gaps = 6/89 (6%)
Query: 1 MQQHG-KTSISSYSSYIK---FLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVR 56
M++ G + S +YS+ IK +GK+G ++K L++ +TD + K ++ N+++ L +
Sbjct: 170 MKESGFRPSTGTYSNLIKGYGIVGKSGEAMKLLDLM--LTDGNSKPDLQTYNMLIKALCQ 227
Query: 57 NGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
+G + + K+ SG+ PD+VT+NT+
Sbjct: 228 SGNMSEAWNIVCKMPASGMLPDSVTFNTM 256
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M Q G K + +YS +K ++ + KA E+ + + + NV ++S +G+
Sbjct: 398 MLQSGVKPDVHAYSILVKGYVRSMETEKAEELLGDMIESGVRPNVVTFTNVISGWGSSGR 457
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
++++K+FDK+ + G++P+ T+ +
Sbjct: 458 MDNAIKIFDKMCELGVSPNLRTFEAL 483
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 43/76 (56%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++YS + + GN + LE+Y +T++ +V +CN ++ L + K + + K+ ++
Sbjct: 258 ATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEE 317
Query: 70 IKQSGLTPDAVTYNTV 85
+ + G PD VTYN +
Sbjct: 318 MSKIGAVPDVVTYNIL 333
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +YS+ I L K G +ALE+ +T++ +V +I+ L R GK + + +LF
Sbjct: 10 VVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFH 69
Query: 69 KIKQSGLTPDAVTYNTV 85
K+ + G + + V YN +
Sbjct: 70 KMIERGCSANTVAYNAL 86
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 37/73 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I L K+ N +A ++ + + + + N ILS L R GK + + FD +
Sbjct: 82 AYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSM 141
Query: 71 KQSGLTPDAVTYN 83
G +PD V YN
Sbjct: 142 PSRGYSPDVVAYN 154
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+++Y+ + L + G +A E+++ + + N N +++ L ++ E + KL +
Sbjct: 45 VATYTIIVDRLCRAGKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLE 104
Query: 69 KIKQSGLTPDAVTYNTV 85
++ G PD +TYNT+
Sbjct: 105 EMASKGYEPDNITYNTI 121
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+ + L K KA E+++++ D ++ +++L+ L + K + LFD
Sbjct: 327 VVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFD 386
Query: 69 KIKQSGLTPDAVTYNTV 85
++ + L PD VT+N +
Sbjct: 387 RMIERKLVPDVVTFNIL 403
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKV--NVFICNLILSCLVRNGKFESSLKL 66
+ +Y+ + L K G +A ++ ++ KV ++ N ++ R K + ++KL
Sbjct: 150 VVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKL 209
Query: 67 FDKIKQSGLTPDAVTYNTV 85
F + G PD VTYN++
Sbjct: 210 FKDVIAKGYMPDTVTYNSI 228
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+S+++ + L K G ++ + N + + N+F N+ + L R G ++ + D
Sbjct: 216 VSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLD 275
Query: 69 KIKQSGLTPDAVTYNTV 85
+ + GLTPD VTYNT+
Sbjct: 276 SVIREGLTPDVVTYNTL 292
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTS-ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M HG T + +Y+S + L K + +E + ++ ++ N N++ L + GK
Sbjct: 487 MWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGK 546
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+L L D+I G+TPD V++ T+
Sbjct: 547 VNEALDLVDEILNKGITPDTVSFATI 572
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ Y+ IK L + G L+AL++ N +++ +++ NL+++ L + G +
Sbjct: 388 KPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANN 447
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L + G PD T+NT+
Sbjct: 448 LMNDAIAKGYVPDVFTFNTL 467
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 40/71 (56%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y +K G+ G +A++++ + + + +V N I++ LV +G F+ + K+F ++K
Sbjct: 79 YIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMK 138
Query: 72 QSGLTPDAVTY 82
G+ PD T+
Sbjct: 139 NVGIVPDVYTF 149
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTS-ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M ++G +S I +Y+ I L K G A + N + +VF N ++ + K
Sbjct: 417 MSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLK 476
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E+++++ +K+ G+TPD +TYN+V
Sbjct: 477 METTIQILNKMWSHGVTPDVITYNSV 502
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 40/79 (50%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
+++ +++ +I+ L + G A+ + +S+ E +V N ++ L +N + K
Sbjct: 249 SNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKY 308
Query: 67 FDKIKQSGLTPDAVTYNTV 85
K+ GL PD TYNT+
Sbjct: 309 LHKLVNGGLEPDGFTYNTL 327
>gi|224107773|ref|XP_002333469.1| predicted protein [Populus trichocarpa]
gi|222836989|gb|EEE75382.1| predicted protein [Populus trichocarpa]
Length = 1048
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+Q G + +I +YS+ I+ N ++A +++S+ + + ++ LSCL R GK
Sbjct: 933 MKQEGCEPTIVTYSALIRGYMDTENVIEAWNVFHSLKTKGPAPDFKTYSMFLSCLCRAGK 992
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVY 86
E +L+L + +G+ P V + TV+
Sbjct: 993 SEEALQLLSDMVDNGIVPSNVNFRTVF 1019
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 43/81 (53%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
G T +SYS YI+ L + G +AL + + ++ E ++ + ++ L++ G+ E +L
Sbjct: 833 GFTVPASYSLYIRALCRAGMLEEALSLVDQVSTEKTTLDRYTHASLVHGLLQKGRLEEAL 892
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
D +KQ G+ P Y ++
Sbjct: 893 AKVDSMKQVGINPTVHVYTSL 913
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 41/70 (58%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGL 75
++ LG+ AL + + I+ E ++V IL R GK+E ++ +F+K++++GL
Sbjct: 181 VRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGL 240
Query: 76 TPDAVTYNTV 85
+P VTYN +
Sbjct: 241 SPTLVTYNVM 250
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I GK G KAL + + + NV N IL L + + E + + +
Sbjct: 387 TYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDM 446
Query: 71 KQSGLTPDAVTYNTV 85
+ +G P++VT+NT+
Sbjct: 447 RSNGCAPNSVTWNTM 461
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S ++ GK G +AL I + + ++ N +++ VR G E D +
Sbjct: 317 TYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTM 376
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ P+A+TY TV
Sbjct: 377 IRKGIMPNAITYTTV 391
Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 34/74 (45%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S + + G K EI I K ++ N ++ R G + +++ ++
Sbjct: 667 TYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEM 726
Query: 71 KQSGLTPDAVTYNT 84
SG+ P VTYNT
Sbjct: 727 TISGIRPCIVTYNT 740
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 8 SISSYSSYIKFLGKNGNSL-KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
++ +Y+ + GK G S K L + + + + + F C+ ++S R G + + K
Sbjct: 243 TLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKF 302
Query: 67 FDKIKQSGLTPDAVTYNTVYQ 87
F ++K G TYN++ Q
Sbjct: 303 FARLKSEGYVAGTFTYNSLLQ 323
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 29/45 (64%)
Query: 41 KVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
K ++ + N +LS +N ++ + ++ I++SGL PD VTYN++
Sbjct: 627 KPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSL 671
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 3 QHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
+HG K + ++S + KN +A E+ I + + ++ N ++ R G+
Sbjct: 623 KHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECW 682
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
++ I++SG PD V+YNTV
Sbjct: 683 KGEEILKGIQKSGGKPDLVSYNTV 706
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 41/70 (58%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGL 75
++ LG+ AL + + I+ E ++V IL R GK+E ++ +F+K++++GL
Sbjct: 181 VRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGL 240
Query: 76 TPDAVTYNTV 85
+P VTYN +
Sbjct: 241 SPTLVTYNVM 250
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I GK G KAL + + + NV N IL L + + E + + +
Sbjct: 387 TYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDM 446
Query: 71 KQSGLTPDAVTYNTV 85
+ +G P++VT+NT+
Sbjct: 447 RSNGCAPNSVTWNTM 461
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S ++ GK G +AL I + + ++ N +++ VR G E D +
Sbjct: 317 TYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTM 376
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ P+A+TY TV
Sbjct: 377 IRKGIMPNAITYTTV 391
Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 34/74 (45%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S + + G K EI I K ++ N ++ R G + +++ ++
Sbjct: 667 TYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEM 726
Query: 71 KQSGLTPDAVTYNT 84
SG+ P VTYNT
Sbjct: 727 TISGIRPCIVTYNT 740
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 8 SISSYSSYIKFLGKNGNSL-KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
++ +Y+ + GK G S K L + + + + + F C+ ++S R G + + K
Sbjct: 243 TLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKF 302
Query: 67 FDKIKQSGLTPDAVTYNTVYQ 87
F ++K G TYN++ Q
Sbjct: 303 FARLKSEGYVAGTFTYNSLLQ 323
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 29/45 (64%)
Query: 41 KVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
K ++ + N +LS +N ++ + ++ I++SGL PD VTYN++
Sbjct: 627 KPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSL 671
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 3 QHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
+HG K + ++S + KN +A E+ I + + ++ N ++ R G+
Sbjct: 623 KHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECW 682
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
++ I++SG PD V+YNTV
Sbjct: 683 KGEEILKGIQKSGGKPDLVSYNTV 706
>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 50/85 (58%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
M+ S+ SY+ ++ L ++G L+A I N + +++ K N++ N+++ L + G F
Sbjct: 323 MKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMF 382
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + +++SG+ PD VTY+T+
Sbjct: 383 SDARSILGLMRESGVAPDTVTYSTL 407
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G S+ +Y+S I+ LG + + + + + NV+ N I+SCL GK
Sbjct: 590 MEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGK 649
Query: 60 FESSLKLFDKIKQSGLTPDAVTY 82
+ + L D++ Q G++P+ T+
Sbjct: 650 LKDATCLLDEMLQKGISPNIYTF 672
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 41/83 (49%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K +++ I L + G A E+++ ++++ K N F +++ R G +
Sbjct: 150 KPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGID 209
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
L D+++ SG P+ V YNTV S
Sbjct: 210 LLDEMRSSGALPNRVAYNTVISS 232
>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 766
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVY 86
KALE++ + ++N+F CN++ R G F +LKL ++++ G+ P++ TYN V
Sbjct: 481 KALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIV- 539
Query: 87 QSDHITWI 94
I W+
Sbjct: 540 ----IKWL 543
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%)
Query: 4 HGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESS 63
H SI + IK +N + A +++ ++N+ CN +L+C + E
Sbjct: 173 HMGGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFI 232
Query: 64 LKLFDKIKQSGLTPDAVTY 82
LF+++K SG +P+ TY
Sbjct: 233 RSLFEELKDSGPSPNVFTY 251
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ HG + + SYS I L K G KAL++ + + K ++ + + L ++G
Sbjct: 349 MRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGL 408
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E SL +F + G D ++YNT+
Sbjct: 409 TEISLSMFHNLGAEGYKHDVISYNTL 434
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 47/85 (55%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+Q + K S+ +YSS L K+G + +L +++++ E K +V N +++ V
Sbjct: 385 VQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDM 444
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
S+ KL +++ +G P++ T+N +
Sbjct: 445 GSACKLVHEMRMNGSVPNSFTFNRL 469
>gi|255586345|ref|XP_002533822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526239|gb|EEF28557.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 373
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
I YS I FL + G ++AL + N + + K ++ +L+ ++ NG + + +LF
Sbjct: 127 GIKDYSKVINFLVRRGMGMEALNVLNQMKLDGIKPDIVCYTTVLNGVIANGVYSKADELF 186
Query: 68 DKIKQSGLTPDAVTYNT 84
D++ GL PD TYN
Sbjct: 187 DELLVFGLVPDVYTYNV 203
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 47/75 (62%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y + L K+GNS AL+++ + + + K +V ++++ L ++G F+ +L LF+++
Sbjct: 212 TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 271
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ D VTY+++
Sbjct: 272 EMKGIKADVVTYSSL 286
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +Y + L NG KALEI+ + + + I N+I+ + K + + LF
Sbjct: 454 SVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLF 513
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ G+ PD VTYN +
Sbjct: 514 CSLSDKGVKPDVVTYNVM 531
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%)
Query: 28 ALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
A ++ S++D+ K +V N+++ L + G + LF K+K+ G TPD TYN + +
Sbjct: 509 AWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIR 568
Query: 88 S 88
+
Sbjct: 569 A 569
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 45/84 (53%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
+++ K S+ YS I L K+G+ AL ++N + + K +V + ++ L +GK++
Sbjct: 238 ERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWD 297
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
K+ ++ + PD VT++ +
Sbjct: 298 DGAKMLREMIGRNIIPDVVTFSAL 321
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G K + +YSS I L +G ++ + + +V + ++ V+ GK
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 330
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +L++++ G+ PD +TYN++
Sbjct: 331 LLEAKELYNEMITRGIAPDTITYNSL 356
Score = 34.3 bits (77), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 36/80 (45%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ ++S+ I K G L+A E+YN + + N ++ + + ++FD
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 374
Query: 69 KIKQSGLTPDAVTYNTVYQS 88
+ G PD VTY+ + S
Sbjct: 375 LMVSKGCEPDIVTYSILINS 394
>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 50/85 (58%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
M+ S+ SY+ ++ L ++G L+A I N + +++ K N++ N+++ L + G F
Sbjct: 323 MKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMF 382
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + +++SG+ PD VTY+T+
Sbjct: 383 SDARSILGLMRESGVAPDTVTYSTL 407
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G S+ +Y+S I+ LG + + + + + NV+ N I+SCL GK
Sbjct: 590 MEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGK 649
Query: 60 FESSLKLFDKIKQSGLTPDAVTY 82
+ + L D++ Q G++P+ T+
Sbjct: 650 LKDATCLLDEMLQKGISPNIYTF 672
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 41/83 (49%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K +++ I L + G A E+++ ++++ K N F +++ R G +
Sbjct: 150 KPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGID 209
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
L D+++ SG P+ V YNTV S
Sbjct: 210 LLDEMRSSGALPNRVAYNTVISS 232
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
SI++ +S + L K G A EIY + +VNV+ N++++ L +N K E++
Sbjct: 322 SINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFL 381
Query: 68 DKIKQSGLTPDAVTYNTV 85
+++ G+ PD VTYNT+
Sbjct: 382 SDMEEKGVFPDVVTYNTL 399
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ S+S+ I L KNG +AL+ + + + + I +++ RNG +LK+ D
Sbjct: 498 LVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRD 557
Query: 69 KIKQSGLTPDAVTYNTV 85
++ + G D VTYNT+
Sbjct: 558 EMLEQGCXLDVVTYNTI 574
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 1 MQQHGK-TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G + +Y++ I + G +A E+ +S++ + K VF N I++ L + GK
Sbjct: 384 MEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGK 443
Query: 60 FESSLKLFDKIKQSGLTPDAVTYN 83
+ + + D++ + G++PD TYN
Sbjct: 444 YLRAKGVLDEMLKIGMSPDTATYN 467
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 33/62 (53%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
+N N + A I++ + + ++ + ++ L +NG + +LK F +K +GL PD V
Sbjct: 475 RNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNV 534
Query: 81 TY 82
Y
Sbjct: 535 IY 536
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 44/80 (55%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ +I + ++ +K + GN++KA E +++ + + N +++ ++ + +
Sbjct: 705 EATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFA 764
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L +K++ SGL PD +TYN +
Sbjct: 765 LVNKMENSGLLPDVITYNVI 784
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 43/85 (50%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
++Q + +Y++ + L K +A E++ +T+ + + +++ ++G
Sbjct: 560 LEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNM 619
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
++ LF+ + Q L PD VTYNT+
Sbjct: 620 NKAVTLFEMMIQRNLKPDVVTYNTL 644
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQQ G K+ + S+ S +K KNG +A+ I + + + N + N I+ + +G
Sbjct: 465 MQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGD 524
Query: 60 FESSLKLFDKIKQSGLTPDAVTYN 83
E + L +K+K SG++ VTYN
Sbjct: 525 TEQAFLLVEKMKNSGVSASIVTYN 548
Score = 38.9 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 30/43 (69%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
+ F N++++ L R+GK +LK+FD++ G+ P+ +TYNT+
Sbjct: 193 DAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTM 235
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS L + G S L ++ + + + C+++L+ L ++GK + ++ + +
Sbjct: 301 TYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEML 360
Query: 71 KQSGLTPDAVTYNTV 85
+GL P V YNT+
Sbjct: 361 VHTGLVPTTVIYNTL 375
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 38/76 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I K G+ + + + + K N+ N++LS L R G+ + + L D++
Sbjct: 231 TYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEM 290
Query: 71 KQSGLTPDAVTYNTVY 86
+ PD TY+ ++
Sbjct: 291 ASHSMFPDGFTYSILF 306
>gi|302765018|ref|XP_002965930.1| hypothetical protein SELMODRAFT_67616 [Selaginella moellendorffii]
gi|300166744|gb|EFJ33350.1| hypothetical protein SELMODRAFT_67616 [Selaginella moellendorffii]
Length = 161
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K S+ Y +K L +NG ++ +I E + ++ + ++ V +G+F +LK
Sbjct: 81 KPSVPLYRDMLKSLARNGRVEGVYSLFETIKQEKAEPHIAMFTEVIDIFVGSGRFRDALK 140
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F+ +K S P+ TY T+
Sbjct: 141 VFEMMKDSEAPPNVRTYRTI 160
>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 755
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ SY++ I GKNG +A+E+ + + NV N ++ R G++E +L L
Sbjct: 565 VISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLK 624
Query: 69 KIKQSGLTPDAVTYN 83
++K++ + PD ++YN
Sbjct: 625 ELKETAVAPDLMSYN 639
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 46/81 (56%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+S IK G+ G KAL++ + + + ++ NL +S + G++E +L L
Sbjct: 599 NVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLL 658
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
++ GLTPD ++Y + ++
Sbjct: 659 REMPAEGLTPDVISYTSAIRA 679
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY+S I+ GK G ALE+ + + NV N+ + G+++ L+L ++
Sbjct: 427 SYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQM 486
Query: 71 KQSGLTPDAVTYNTVYQS 88
GLTP+ +TYN+ ++
Sbjct: 487 PAQGLTPNVITYNSAIKT 504
Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 37/69 (53%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGL 75
I+ G+ G + LE+ + + NV N + + G++E +L L K+K+ +
Sbjct: 467 IRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAM 526
Query: 76 TPDAVTYNT 84
TPD++TYN+
Sbjct: 527 TPDSITYNS 535
Score = 38.9 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M G T ++ +Y+S IK GK G KAL++ + + + + N ++ + G+
Sbjct: 486 MPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGR 545
Query: 60 FESSLKLFDKIKQSGLTPDAVTY 82
++ ++ L ++ GLTPD ++Y
Sbjct: 546 WKEAVALLREMPGQGLTPDVISY 568
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITD-ESDKVNVFICNLILSCLVRNGK 59
M++ G SY++ I G+ G KALE+ I + E NVF N + +
Sbjct: 136 MKEGGVVCAHSYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFCYNSAIEACGSGDQ 195
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+E ++ L ++ + PD ++YN+ ++
Sbjct: 196 WEIAVSLLREMADREVVPDEISYNSAIKA 224
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 41/78 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I K G +A+ + + + +V + +NG++E +++L ++
Sbjct: 532 TYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQM 591
Query: 71 KQSGLTPDAVTYNTVYQS 88
GLTP+ +TYN+V ++
Sbjct: 592 PTKGLTPNVITYNSVIKA 609
Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 42/78 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I GK G +AL + ++ + N+ + R+G+++ ++++ ++
Sbjct: 252 TYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQM 311
Query: 71 KQSGLTPDAVTYNTVYQS 88
+ G+TPD ++Y+ ++
Sbjct: 312 ESQGVTPDVISYDAAIKA 329
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 41/77 (53%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
++S I GK G KA+E+ +T + N ++ ++G+++ +L+L ++
Sbjct: 358 FNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMP 417
Query: 72 QSGLTPDAVTYNTVYQS 88
L PDA++YN+ ++
Sbjct: 418 AKRLKPDAISYNSAIEA 434
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G T + SY + IK G G ++++ + + N N + + G+
Sbjct: 311 MESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQ 370
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNT 84
+E +++L ++ GLTPDA ++N+
Sbjct: 371 WEKAVELLREVTALGLTPDATSFNS 395
Score = 34.7 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 37/73 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY+S IK G+ G + + + + + N +++ + G+++ +L + ++
Sbjct: 217 SYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEM 276
Query: 71 KQSGLTPDAVTYN 83
GLTP+ ++YN
Sbjct: 277 SAKGLTPETISYN 289
>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
Length = 532
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 47/85 (55%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+ +H + ++Y+S I +G +A+ I ++ + + NV N+++ CL ++G
Sbjct: 183 IDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFH 242
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++F+ + QSG PDA TY ++
Sbjct: 243 AEAREIFNSMIQSGPKPDATTYGSL 267
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 41/78 (52%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I ++++ I G KA E++ + D +V I ++ L + GK + KLF
Sbjct: 365 NIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLF 424
Query: 68 DKIKQSGLTPDAVTYNTV 85
D + ++G P+ V+YNT+
Sbjct: 425 DLMPRAGAKPNVVSYNTM 442
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 39/77 (50%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
++ +++ I L K G +A ++++ + K NV N ++ G+ +KL D
Sbjct: 401 VTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLD 460
Query: 69 KIKQSGLTPDAVTYNTV 85
+ GL P AVT+NT+
Sbjct: 461 DMLLIGLKPTAVTFNTL 477
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ G++ S+ +Y+ + L KNG +A++++ S+ K ++ I ++++ + + +
Sbjct: 315 MQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARR 374
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ES++++FD+I GL P+ VTYN +
Sbjct: 375 WESAMEIFDEIPTVGLVPNIVTYNIM 400
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y I L K+G ++K L+++ + + NV + + +++ L R GK ++ LFD++
Sbjct: 81 TYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEM 140
Query: 71 KQSGLTPDAVTYNTVYQS 88
G+ + +TYN++ +
Sbjct: 141 VSQGIKANVITYNSLIHA 158
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
YSS I L + G +A+ +++ + + K NV N ++ R G ++ + + F ++
Sbjct: 117 YSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMV 176
Query: 72 QSGLTPDAVTYNTVYQSDHIT 92
G+ PD VT+ T+ DH++
Sbjct: 177 GEGILPDVVTFTTLI--DHLS 195
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 44/77 (57%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ ++++ I L K G +A +I+ + + + N+ N +L+ L + + + +++LF+
Sbjct: 184 VVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFE 243
Query: 69 KIKQSGLTPDAVTYNTV 85
+ + G+ D ++YNT+
Sbjct: 244 VMVERGIKIDVISYNTL 260
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 43/83 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K SI YS I + + A+EI++ I N+ N++++ L + GK + +
Sbjct: 356 KPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAER 415
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
LF ++++SG D +++N + +
Sbjct: 416 LFVQMEESGCEQDEISFNFIIRG 438
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 37/74 (50%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y I L K + +A+E++ + E N F L++ L ++G LK+F ++
Sbjct: 47 YGYLINALRKTRQARRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMI 106
Query: 72 QSGLTPDAVTYNTV 85
G+ P+ + Y+++
Sbjct: 107 NMGICPNVIVYSSL 120
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
++Q +I +Y+S + L + A+ ++ + + K++V N +++ +GK
Sbjct: 211 IKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKT 270
Query: 61 ESSLKLFDKIKQSGLTPDAVTYN----TVYQSDHI 91
E ++ LF K++ LTP TY +YQ+ I
Sbjct: 271 EEAMTLFRKMQYEELTPSITTYTILLKALYQNGRI 305
>gi|357123295|ref|XP_003563347.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Brachypodium distachyon]
Length = 800
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 40/77 (51%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ ++ GK GN ++AL + + + K + N + R G +E + K D
Sbjct: 293 VVTYNALLQVFGKAGNYMEALRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCLD 352
Query: 69 KIKQSGLTPDAVTYNTV 85
+ G+ P+A TYNT+
Sbjct: 353 TMVSKGILPNAFTYNTI 369
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 32 YNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNT---VYQS 88
+ + K ++ I N +LS +NG + + ++FD IKQ GL+PD +TYN+ +Y
Sbjct: 596 FQEVMARGHKPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAK 655
Query: 89 DHITW 93
+ +W
Sbjct: 656 SNESW 660
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 43/85 (50%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
M + K + ++S + KNG KA E+++SI ++ N ++ ++ +
Sbjct: 600 MARGHKPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNES 659
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+ K+ ++K S L PD V+YNTV
Sbjct: 660 WEAEKILKRLKTSQLKPDVVSYNTV 684
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 41/77 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
++++ I G+ G+ A ++Y+ +T + N +LS L R G + ++ + +K+
Sbjct: 470 TFNTLISAYGRCGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKM 529
Query: 71 KQSGLTPDAVTYNTVYQ 87
K G P+ ++Y+ + Q
Sbjct: 530 KNEGFKPNDMSYSLLLQ 546
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + G G +AL +++ + V NLIL L + +F L++ ++
Sbjct: 365 TYNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEM 424
Query: 71 KQSGLTPDAVTYNTV 85
+SG TP+ VT+NT+
Sbjct: 425 SRSGCTPNRVTWNTM 439
Score = 37.7 bits (86), Expect = 0.98, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 38/76 (50%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
S+ I G++G +A+ + + V N +L + G + +L++ ++++
Sbjct: 262 STVIAACGRDGLVDEAVAFFEDLKSRGHVPCVVTYNALLQVFGKAGNYMEALRVLKEMEE 321
Query: 73 SGLTPDAVTYNTVYQS 88
SG PDAVTYN + S
Sbjct: 322 SGCKPDAVTYNELAGS 337
>gi|225430854|ref|XP_002269078.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g01390-like [Vitis vinifera]
Length = 519
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 47/80 (58%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ SY++Y+K L N +A ++Y + N + +++ L +GK++++L++F
Sbjct: 135 TVVSYTAYMKILFDNKRVKEAADVYKEMLQSGCAPNCYTYTVLMEHLTGSGKYKAALEIF 194
Query: 68 DKIKQSGLTPDAVTYNTVYQ 87
+++++G+ PD T N + +
Sbjct: 195 SRMQEAGVQPDKATCNILIE 214
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/93 (21%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G KT +Y+S + + +G+ +A+ ++ + + + V + L N +
Sbjct: 92 MQEKGIKTDAVTYTSLMHWFSNDGDIERAVRVWKEMKAKGCCLTVVSYTAYMKILFDNKR 151
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQSDHIT 92
+ + ++ ++ QSG P+ TY + +H+T
Sbjct: 152 VKEAADVYKEMLQSGCAPNCYTYTVLM--EHLT 182
>gi|440577332|emb|CCI55338.1| PH01B019A14.7 [Phyllostachys edulis]
Length = 359
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 44/81 (54%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++++YS+ + FL ++G +A E++ + E + + N+++S L R G+ + LF
Sbjct: 211 NVNTYSTLMHFLCQHGQVDEAFELFERMWKEDIAADTVVYNILISGLCREGRVTKAFDLF 270
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
+ G P++ TY ++ S
Sbjct: 271 KSMASEGCYPNSGTYQLIFTS 291
>gi|343412512|emb|CCD21653.1| hypothetical protein, conserved [Trypanosoma vivax Y486]
Length = 345
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 47/78 (60%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++++Y+ + L + + L +++ +T+ K V N I S +++G +E + +LF
Sbjct: 201 NVNTYNCLMNVLKEKEPYEETLRVFHRMTECGIKPTVRTYNTISSAALKHGDYELAFQLF 260
Query: 68 DKIKQSGLTPDAVTYNTV 85
+++K+ G+ PD VTYNT+
Sbjct: 261 EEMKKKGVLPDVVTYNTL 278
>gi|224115776|ref|XP_002332054.1| predicted protein [Populus trichocarpa]
gi|222831940|gb|EEE70417.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 42/76 (55%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y+ I K GN +L +Y+ + + + N ++ L R F+ +LK+ DK
Sbjct: 196 TTYTHMISCFSKVGNLFDSLRLYDGMKKRGWVPGIEVYNSLVYILTRENCFKEALKILDK 255
Query: 70 IKQSGLTPDAVTYNTV 85
+K++GL D+ TYN++
Sbjct: 256 MKETGLQRDSATYNSM 271
>gi|449477323|ref|XP_004154991.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g18900-like [Cucumis sativus]
Length = 874
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ G T + +YS I LGK G+ A ++ + DE N+ N++++ +
Sbjct: 475 MQDAGLTPDTFTYSVMINCLGKAGHLNAAHRLFCRMVDEGCVPNLVTYNIMIALQAKARN 534
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
+E +LKL+ ++QSG PD VTY V +
Sbjct: 535 YEIALKLYRDMQQSGFEPDKVTYCIVME 562
Score = 41.2 bits (95), Expect = 0.089, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 34/71 (47%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y + GK+GN KA E Y+++ K NV CN +LS +R + + +L +
Sbjct: 592 YGLLVDLWGKSGNVQKAWEWYHAMLKAGLKPNVPTCNSLLSAFLRVHQLSDAYQLLQSML 651
Query: 72 QSGLTPDAVTY 82
GL P TY
Sbjct: 652 TFGLKPSLQTY 662
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G + +Y + I K+G A+ +Y + D + F +++++CL + G
Sbjct: 440 MQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGH 499
Query: 60 FESSLKLFDKIKQSGLTPDAVTYN 83
++ +LF ++ G P+ VTYN
Sbjct: 500 LNAAHRLFCRMVDEGCVPNLVTYN 523
>gi|449440748|ref|XP_004138146.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Cucumis sativus]
Length = 874
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ G T + +YS I LGK G+ A ++ + DE N+ N++++ +
Sbjct: 475 MQDAGLTPDTFTYSVMINCLGKAGHLNAAHRLFCRMVDEGCVPNLVTYNIMIALQAKARN 534
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
+E +LKL+ ++QSG PD VTY V +
Sbjct: 535 YEIALKLYRDMQQSGFEPDKVTYCIVME 562
Score = 41.2 bits (95), Expect = 0.089, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 34/71 (47%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y + GK+GN KA E Y+++ K NV CN +LS +R + + +L +
Sbjct: 592 YGLLVDLWGKSGNVQKAWEWYHAMLKAGLKPNVPTCNSLLSAFLRVHQLSDAYQLLQSML 651
Query: 72 QSGLTPDAVTY 82
GL P TY
Sbjct: 652 TFGLKPSLQTY 662
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G + +Y + I K+G A+ +Y + D + F +++++CL + G
Sbjct: 440 MQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGH 499
Query: 60 FESSLKLFDKIKQSGLTPDAVTYN 83
++ +LF ++ G P+ VTYN
Sbjct: 500 LNAAHRLFCRMVDEGCVPNLVTYN 523
>gi|255557995|ref|XP_002520026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540790|gb|EEF42350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1040
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
+++ G T S+S Y+ + L K + +E++ + D++ N F +++S LV+ G
Sbjct: 248 IRERGITLSVSVYNFMLSSLQKKSLHGRVIELWRQMVDKAVAPNTFTYTVVISSLVKEGL 307
Query: 60 FESSLKLFDKIKQSGLTPDAVTYN 83
E + K+F+++K +G P+ VTY+
Sbjct: 308 HEEAFKVFNEMKNTGHVPEEVTYS 331
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 39/78 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y + + + GK G +A ++ + +E K N+++ G + + +LF +
Sbjct: 794 AYMNMVSYYGKAGKRNEASLLFTKMQEEGIKPGKVSYNIMIKVFAIAGLYHEAKELFHAM 853
Query: 71 KQSGLTPDAVTYNTVYQS 88
++ G PD+ TY ++ Q+
Sbjct: 854 QRDGWPPDSFTYLSLVQA 871
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +++ I L K GN ++ ++++ + N+F N+ + L R G + + +L +
Sbjct: 216 ILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLE 275
Query: 69 KIKQSGLTPDAVTYNTV 85
I GLTPD ++YNT+
Sbjct: 276 SIVSEGLTPDVISYNTL 292
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 44/85 (51%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
M++ K SI Y++ +K L K G L+AL++ + + +++ NL+++ L + G
Sbjct: 383 MEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCL 442
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + + G PD T+NT+
Sbjct: 443 SDANGILNDAIAKGCIPDIFTFNTL 467
Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M HG T + +Y++ + L K ++ + ++ ++ N+ N+++ ++ K
Sbjct: 487 MLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRK 546
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+++LF ++K GLTPD VT T+
Sbjct: 547 VSEAMELFKEMKTRGLTPDIVTLCTL 572
Score = 37.7 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YSS I L +G+ +A+ ++ ++ K ++ + N ++ L + G +L+L +
Sbjct: 358 TYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDM 417
Query: 71 KQSGLTPDAVTYNTV 85
+ G +PD TYN V
Sbjct: 418 MEHGCSPDIWTYNLV 432
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 42/80 (52%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I ++++ I K N KA+EI +++ +V N +L+ L + K ++ + F
Sbjct: 461 IFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFK 520
Query: 69 KIKQSGLTPDAVTYNTVYQS 88
+ + G TP+ +TYN + +S
Sbjct: 521 AMLEKGCTPNIITYNILIES 540
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 37/77 (48%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY + I K ++A +++ + + ++ N ++ L + G + S KLF K+
Sbjct: 183 SYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKV 242
Query: 71 KQSGLTPDAVTYNTVYQ 87
+ G+ P+ T+N Q
Sbjct: 243 MKRGVCPNLFTFNIFIQ 259
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M +HG I +Y+ + L K G A I N + ++F N ++ +
Sbjct: 417 MMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRN 476
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++++ D + G+TPD +TYNT+
Sbjct: 477 MDKAIEILDTMLSHGITPDVITYNTL 502
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +++ I L K GN ++ ++++ + N+F N+ + L R G + + +L +
Sbjct: 216 ILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLE 275
Query: 69 KIKQSGLTPDAVTYNTV 85
I GLTPD ++YNT+
Sbjct: 276 SIVSEGLTPDVISYNTL 292
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 44/85 (51%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
M++ K SI Y++ +K L K G L+AL++ + + +++ NL+++ L + G
Sbjct: 383 MEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCL 442
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + + G PD T+NT+
Sbjct: 443 SDANGILNDAIAKGCIPDIFTFNTL 467
Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M HG T + +Y++ + L K ++ + ++ ++ N+ N+++ ++ K
Sbjct: 487 MLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRK 546
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+++LF ++K GLTPD VT T+
Sbjct: 547 VSEAMELFKEMKTRGLTPDIVTLCTL 572
Score = 37.7 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YSS I L +G+ +A+ ++ ++ K ++ + N ++ L + G +L+L +
Sbjct: 358 TYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDM 417
Query: 71 KQSGLTPDAVTYNTV 85
+ G +PD TYN V
Sbjct: 418 MEHGCSPDIWTYNLV 432
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 42/80 (52%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I ++++ I K N KA+EI +++ +V N +L+ L + K ++ + F
Sbjct: 461 IFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFK 520
Query: 69 KIKQSGLTPDAVTYNTVYQS 88
+ + G TP+ +TYN + +S
Sbjct: 521 AMLEKGCTPNIITYNILIES 540
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 37/77 (48%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY + I K ++A +++ + + ++ N ++ L + G + S KLF K+
Sbjct: 183 SYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKV 242
Query: 71 KQSGLTPDAVTYNTVYQ 87
+ G+ P+ T+N Q
Sbjct: 243 MKRGVCPNLFTFNIFIQ 259
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M +HG I +Y+ + L K G A I N + ++F N ++ +
Sbjct: 417 MMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRN 476
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++++ D + G+TPD +TYNT+
Sbjct: 477 MDKAIEILDTMLSHGITPDVITYNTL 502
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 45/75 (60%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
++S+++ L +NG+ AL++ + E + +V+ + +++CL NG+ E + + +++
Sbjct: 303 TFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQM 362
Query: 71 KQSGLTPDAVTYNTV 85
SG PD T+NT+
Sbjct: 363 VDSGCLPDTTTFNTL 377
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 45/76 (59%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
+++++ I L +AL++ +T + NV+ N++++ L + G +++LF++
Sbjct: 372 TTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEE 431
Query: 70 IKQSGLTPDAVTYNTV 85
+K SG TPD VTYN +
Sbjct: 432 MKSSGCTPDEVTYNIL 447
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 41/78 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S + K GN KA +I ++T +V+V +++ L + + +++LKL +
Sbjct: 548 TYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGM 607
Query: 71 KQSGLTPDAVTYNTVYQS 88
+ G+ P YN V QS
Sbjct: 608 RMKGMKPTPKAYNPVIQS 625
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 40/85 (47%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+Q+ + + +YS+ I L NG +A I N + D + N ++ L +
Sbjct: 328 LQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQL 387
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
E +L L ++ GL+P+ T+N +
Sbjct: 388 EEALDLARELTVKGLSPNVYTFNIL 412
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 46/77 (59%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y++ + L K+G A+EI N ++ + + N ++ L + GK E ++KL D
Sbjct: 369 IVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLD 428
Query: 69 KIKQSGLTPDAVTYNTV 85
++++ GL PD +TY+++
Sbjct: 429 EMRRKGLKPDIITYSSL 445
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 46/75 (61%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I L K G + +A+++ + + + K ++ + ++S L R GK + ++K F +
Sbjct: 406 TYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL 465
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ P+A+TYN++
Sbjct: 466 EGLGIRPNAITYNSI 480
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M HG T S SY+ + K +A+E + + ++ N +L+ L ++GK
Sbjct: 325 MPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGK 384
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++++ +++ G +P +TYNTV
Sbjct: 385 VDVAVEILNQLSSKGCSPVLITYNTV 410
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G K + +Y+ I + K G +A++ N++ + NV N+IL + G+
Sbjct: 220 MRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGR 279
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + KL + + G +P VT+N +
Sbjct: 280 WMDAEKLLSDMLRKGCSPSVVTFNIL 305
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 36/72 (50%)
Query: 14 SYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQS 73
++++ L +NG + S+ D ++ C ++ R GK + + + + ++QS
Sbjct: 62 NHLRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQS 121
Query: 74 GLTPDAVTYNTV 85
G PD +TYN +
Sbjct: 122 GAVPDVITYNVL 133
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 39/77 (50%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ ++ L +G +A+E+ + + +V +++ + ++KL D
Sbjct: 159 VVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLD 218
Query: 69 KIKQSGLTPDAVTYNTV 85
+++ G PD VTYN +
Sbjct: 219 EMRNKGSKPDVVTYNVL 235
Score = 34.7 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
+S I+ + G + KA + + +V N+++S ++G+ +++L++ D++
Sbjct: 96 TSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMN- 154
Query: 73 SGLTPDAVTYNTVYQS 88
+ PD VTYNT+ ++
Sbjct: 155 --VAPDVVTYNTILRT 168
>gi|356514535|ref|XP_003525961.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Glycine max]
Length = 317
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K I +Y+++IK L K G AL+++ + + K +V ICN I+ L + +L+
Sbjct: 86 KPHIFTYATFIKALTKKGKLGTALKLFRGMWGKGGKPDVVICNCIIDALCFKKRIPDALE 145
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F + + G P+ TY ++
Sbjct: 146 IFCDMSERGCEPNVATYKSL 165
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 2 QQHGKTSISS-YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
QQ G S Y+ ++ L K+G +A+E+ ++ D + K +V N +++ L + G+
Sbjct: 46 QQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRL 105
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + ++ D++++SG + VTYNT+
Sbjct: 106 DEAQQVLDEMERSGFAANLVTYNTL 130
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M +HG + +YS+ I L + G+ K + + K +V ++++ L + GK
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGK 313
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVY 86
+ +L ++ + G TP+AVTY+ V+
Sbjct: 314 MVEACRLVKRMLEDGCTPNAVTYSLVF 340
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 2 QQHGKTSISS-YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
QQ G S Y+ ++ L K+G +A+E+ ++ D + K +V N +++ L + G+
Sbjct: 46 QQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRL 105
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + ++ D++++SG + VTYNT+
Sbjct: 106 DEAQQVLDEMERSGFAANLVTYNTL 130
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M +HG + +YS+ I L + G+ K + + K +V ++++ L + GK
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGK 313
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVY 86
+ +L ++ + G TP+AVTY+ V+
Sbjct: 314 MVEACRLVKRMLEDGCTPNAVTYSLVF 340
>gi|224120112|ref|XP_002331139.1| predicted protein [Populus trichocarpa]
gi|222872867|gb|EEF09998.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 28 ALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
A+E++N + + +NV I+S L + G+ E + KL+D++ ++GLTPD Y ++
Sbjct: 265 AVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEAFKLYDEMTEAGLTPDDRVYTSLVS 324
Query: 88 SDH 90
S H
Sbjct: 325 SLH 327
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 44/84 (52%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ SY++ I K GN ++A +++ + + N N+++ + G+ + + +L
Sbjct: 175 NVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELR 234
Query: 68 DKIKQSGLTPDAVTYNTVYQSDHI 91
D+++ G+ PD TY ++ + I
Sbjct: 235 DEMRAKGIFPDIYTYTSLLHGECI 258
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I L K G + KA + + + + NV N++++C+ + G + ++ + K+
Sbjct: 223 YTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMS 282
Query: 72 QSGLTPDAVTYNT-------VYQSDHITWI 94
+ G+ PD VTYNT V + D W+
Sbjct: 283 EKGVAPDVVTYNTLIKGLSDVLEMDEAMWL 312
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 46/88 (52%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ +++S I+ L G +A ++ + + VN+ NL++ L+R K +++
Sbjct: 324 KPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAME 383
Query: 66 LFDKIKQSGLTPDAVTYNTVYQSDHITW 93
L D++ GL PD+ TY+ + + W
Sbjct: 384 LMDEMTSLGLEPDSFTYSILIKGFCKMW 411
Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 42/83 (50%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + +Y + I+ L KA+E+ + + + NV + + +L ++G++E K
Sbjct: 147 RADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGK 206
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
+F ++ + G+ PD V Y + S
Sbjct: 207 VFVEMSEKGIEPDVVMYTGLIDS 229
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 42/87 (48%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
M + + +YS+ I K G+ A E+ SI DE + +++++ ++G
Sbjct: 458 MDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDM 517
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
E++ + ++ SG PD ++++ Q
Sbjct: 518 EAANGVLKQMTASGFLPDVAVFDSLIQ 544
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I L K G + KA + + + + NV N++++C+ + G + ++ + K+
Sbjct: 223 YTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMS 282
Query: 72 QSGLTPDAVTYNT-------VYQSDHITWI 94
+ G+ PD VTYNT V + D W+
Sbjct: 283 EKGVAPDVVTYNTLIKGLSDVLEMDEAMWL 312
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 46/88 (52%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ +++S I+ L G +A ++ + + VN+ NL++ L+R K +++
Sbjct: 324 KPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAME 383
Query: 66 LFDKIKQSGLTPDAVTYNTVYQSDHITW 93
L D++ GL PD+ TY+ + + W
Sbjct: 384 LMDEMTSLGLEPDSFTYSILIKGFCKMW 411
Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 42/83 (50%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + +Y + I+ L KA+E+ + + + NV + + +L ++G++E K
Sbjct: 147 RADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGK 206
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
+F ++ + G+ PD V Y + S
Sbjct: 207 VFVEMSEKGIEPDVVMYTGLIDS 229
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 42/87 (48%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
M + + +YS+ I K G+ A E+ SI DE + +++++ ++G
Sbjct: 458 MDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDM 517
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
E++ + ++ SG PD ++++ Q
Sbjct: 518 EAANGVLKQMTASGFLPDVAVFDSLIQ 544
>gi|218200036|gb|EEC82463.1| hypothetical protein OsI_26904 [Oryza sativa Indica Group]
Length = 346
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I L K G + KA + + + + NV N++++C+ + G + ++ + K+
Sbjct: 223 YTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMS 282
Query: 72 QSGLTPDAVTYNT-------VYQSDHITWI 94
+ G+ PD VTYNT V + D W+
Sbjct: 283 EKGVAPDVVTYNTLIKGLSDVLEMDEAMWL 312
Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 42/83 (50%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + +Y + I+ L KA+E+ + + + NV + + +L ++G++E K
Sbjct: 147 RADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGK 206
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
+F ++ + G+ PD V Y + S
Sbjct: 207 VFVEMSEKGIEPDVVMYTGLIDS 229
>gi|255660954|gb|ACU25646.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 375
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ G +YS+ I L K N +AL + N + K NV + N +++ LV KFE
Sbjct: 122 QKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNTLINGLVGASKFE 181
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
++++F ++ +P +TYNT+
Sbjct: 182 DAIRVFREMGTMHCSPTIITYNTL 205
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 45/81 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+ +YS +K L + +AL+++N +T + K +V + N+++ L GK + +L L+
Sbjct: 233 GVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLY 292
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
+ + P+ V++NT+ +
Sbjct: 293 FDMNRWKYAPNLVSHNTLMEG 313
>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 412
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K SYS I L K G A E + ++ E + NV CN+++ R + + +
Sbjct: 304 KLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANI 363
Query: 66 LF---DKIKQSGLTPDAVTYNTVYQS 88
LF +K++++G TPD +TYNT+ +
Sbjct: 364 LFEKMEKMEENGCTPDIITYNTLLRG 389
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 41/74 (55%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y ++ L KNG +A+E++N + + K++ + ++ L + GK E + + F ++
Sbjct: 275 YVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLS 334
Query: 72 QSGLTPDAVTYNTV 85
Q GL P+ VT N +
Sbjct: 335 QEGLQPNVVTCNIM 348
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHGK-TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G ++ SYSS + G ++ ++N + D+ + N+ N+++ L + GK
Sbjct: 88 MKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGK 147
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ KL + Q G+ D VTYN++
Sbjct: 148 VIEAKKLLEVTIQRGIILDLVTYNSL 173
>gi|224081867|ref|XP_002306508.1| predicted protein [Populus trichocarpa]
gi|222855957|gb|EEE93504.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G K + +Y++ I +G + L +Y + + + NV CN ++ L NG+
Sbjct: 249 MKSKGIKLDVVAYNTVINAIGLSEGVDFVLRVYREMRELGCQPNVVTCNTVIKLLCENGR 308
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
+ + K+ D++ QS + PD TY+ ++
Sbjct: 309 IKEAYKMLDEMPQSYIAPDVFTYHCFFR 336
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 45/77 (58%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ SYS Y+ L K+G KA+++Y + + K++V N +++ + + + L+++
Sbjct: 223 LHSYSIYMDILCKSGKPWKAVKLYKEMKSKGIKLDVVAYNTVINAIGLSEGVDFVLRVYR 282
Query: 69 KIKQSGLTPDAVTYNTV 85
++++ G P+ VT NTV
Sbjct: 283 EMRELGCQPNVVTCNTV 299
>gi|255086920|ref|XP_002505383.1| predicted protein [Micromonas sp. RCC299]
gi|226520653|gb|ACO66641.1| predicted protein [Micromonas sp. RCC299]
Length = 175
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 43/73 (58%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
S+ I GK+ KAL+++ + + + N+F + ++S + + + +L++F + +
Sbjct: 37 SALINACGKSKQWEKALDVFREMKADGVEANIFTYSALISACAKGRQLDKALEVFRECQV 96
Query: 73 SGLTPDAVTYNTV 85
SG+ PDA+TY TV
Sbjct: 97 SGVEPDAITYGTV 109
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 42/74 (56%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
+++ IK G++G KALE+Y ++ N C+ +++ ++ ++E +L +F ++K
Sbjct: 1 FTTLIKTCGRSGGWDKALELYQAMKSRGVAANTITCSALINACGKSKQWEKALDVFREMK 60
Query: 72 QSGLTPDAVTYNTV 85
G+ + TY+ +
Sbjct: 61 ADGVEANIFTYSAL 74
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 36/68 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y + I K +AL+I+ + ++ NV N +LS R G+ + +L +F ++
Sbjct: 105 TYGTVIAACEKGKRCDEALDIFRQMRAKNVDANVITYNSVLSACDRAGRADDALDIFAQM 164
Query: 71 KQSGLTPD 78
++ G+ PD
Sbjct: 165 RKEGVKPD 172
>gi|255660956|gb|ACU25647.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 376
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ G +YS+ I L K N +AL + N + K NV + N +++ LV KFE
Sbjct: 122 QKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNTLINGLVGASKFE 181
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
++++F ++ +P +TYNT+
Sbjct: 182 DAIRVFREMGTMHCSPTIITYNTL 205
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 45/81 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+ +YS +K L + +AL+++N +T + K +V + N+++ L GK + +L L+
Sbjct: 233 GVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLY 292
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
+ + P+ V++NT+ +
Sbjct: 293 FDMNRWKCAPNLVSHNTLMEG 313
>gi|356508608|ref|XP_003523047.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 879
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G + + +YS I LGK+GN A ++ + D+ N+ N++++ +
Sbjct: 479 MQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARN 538
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
++++L+L+ ++ +G PD VTY+ V +
Sbjct: 539 YQTALELYRDMQNAGFKPDKVTYSIVME 566
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 33/81 (40%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q H Y + GK GN KA E Y+++ NV CN +LS +R +
Sbjct: 586 QNHWVPDEPVYGLLVDLWGKAGNVEKAWEWYHTMLRAGLLPNVPTCNSLLSAFLRVHRLP 645
Query: 62 SSLKLFDKIKQSGLTPDAVTY 82
+ L + GL P TY
Sbjct: 646 DAYNLLQNMVTLGLNPSLQTY 666
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G + +Y + I K G A+ +Y + + + F +++++CL ++G
Sbjct: 444 MQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGN 503
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
++ +LF ++ G P+ VTYN +
Sbjct: 504 LSAAHRLFCEMVDQGCVPNIVTYNIL 529
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%)
Query: 3 QHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFES 62
Q + ++ +Y++ I L K+G A I+ I E + V+ N++++ L + G F+
Sbjct: 351 QGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDE 410
Query: 63 SLKLFDKIKQSGLTPDAVTYNTV 85
+L L +++ + PDAV+Y T+
Sbjct: 411 ALALLSRMEDNACIPDAVSYETI 433
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
KAL I+N + E + NV+ N+I++ L + + + ++ LF ++ + PD VTYN +
Sbjct: 235 KALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNIL 293
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M Q G + ++ Y+ I L K +A+ ++ + + +V N+++ L + GK
Sbjct: 243 MVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGK 302
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+SL+L D+++ G T D +TYN++ +
Sbjct: 303 ISTSLELVDEMRSIGKTVDIITYNSLLHA 331
>gi|298204661|emb|CBI25159.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 44/81 (54%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
GK S++ Y+ I K + +Y + + K +VF N ++S RN +F +L
Sbjct: 251 GKPSVAMYNILINGYVNCREHEKVMTVYEKMIKDRVKPDVFTFNSLISSCCRNSQFGLAL 310
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
++F ++K G +P+ V++NT+
Sbjct: 311 EMFKEMKDKGCSPNVVSFNTL 331
>gi|225466900|ref|XP_002264269.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Vitis vinifera]
Length = 588
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 44/81 (54%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
GK S++ Y+ I K + +Y + + K +VF N ++S RN +F +L
Sbjct: 284 GKPSVAMYNILINGYVNCREHEKVMTVYEKMIKDRVKPDVFTFNSLISSCCRNSQFGLAL 343
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
++F ++K G +P+ V++NT+
Sbjct: 344 EMFKEMKDKGCSPNVVSFNTL 364
>gi|384247929|gb|EIE21414.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 448
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 45/78 (57%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+ I GK GN +A+++ +++ D+ K V N ILS R+G+ E +L+++
Sbjct: 142 NLVTYNILIDIHGKMGNWQEAVQVLDALEDQGTKPEVRTYNTILSACNRSGQPEHALRVY 201
Query: 68 DKIKQSGLTPDAVTYNTV 85
+++ G P A TY +
Sbjct: 202 ERMLADGAQPTATTYTAL 219
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +YSS I K G ALE+ + + ++ K N N +LS + G+++++ +F
Sbjct: 247 NVITYSSLISACEKAGRWQLALELLDEMHRDNCKPNTVTFNALLSACAQGGQWKAAQDVF 306
Query: 68 DKIKQSGLTPDAVTY 82
+++ G PDAV+Y
Sbjct: 307 EQMPSCGCKPDAVSY 321
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ HG ++ +YS+ + K AL++Y + E N+ N+++ + G
Sbjct: 99 MRGHGVVCNVHTYSALMNVCIKANELELALDVYGQLLREGCTPNLVTYNILIDIHGKMGN 158
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
++ ++++ D ++ G P+ TYNT+
Sbjct: 159 WQEAVQVLDALEDQGTKPEVRTYNTI 184
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 40/77 (51%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ I G + KALE+ + NV + +++ ++ + E +L ++
Sbjct: 73 VYTYTTIISQCGSHQQLRKALELVAEMRGHGVVCNVHTYSALMNVCIKANELELALDVYG 132
Query: 69 KIKQSGLTPDAVTYNTV 85
++ + G TP+ VTYN +
Sbjct: 133 QLLREGCTPNLVTYNIL 149
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 40/83 (48%)
Query: 3 QHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFES 62
Q K + +Y++ + ++G AL +Y + + + ++S + GK E
Sbjct: 172 QGTKPEVRTYNTILSACNRSGQPEHALRVYERMLADGAQPTATTYTALISAYGKTGKIEE 231
Query: 63 SLKLFDKIKQSGLTPDAVTYNTV 85
+L++F + + G + +TY+++
Sbjct: 232 ALRIFQDMVRRGCERNVITYSSL 254
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
SI++ +S + L K G A EIY + +VNV+ N++++ L +N K E++
Sbjct: 218 SINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFL 277
Query: 68 DKIKQSGLTPDAVTYNTV 85
+++ G+ PD VTYNT+
Sbjct: 278 SDMEEKGVFPDVVTYNTL 295
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ S+S+ I L KNG +AL+ + + + + I +++ RNG +LK+ D
Sbjct: 394 LVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRD 453
Query: 69 KIKQSGLTPDAVTYNTV 85
++ + G D VTYNT+
Sbjct: 454 EMLEQGCVLDVVTYNTI 470
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 1 MQQHGK-TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G + +Y++ I + G +A E+ +S++ + K VF N I++ L + GK
Sbjct: 280 MEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGK 339
Query: 60 FESSLKLFDKIKQSGLTPDAVTYN 83
+ + + D++ + G++PD TYN
Sbjct: 340 YLRAKGVLDEMLKIGMSPDTATYN 363
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 33/62 (53%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
+N N + A I++ + + ++ + ++ L +NG + +LK F +K +GL PD V
Sbjct: 371 RNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNV 430
Query: 81 TY 82
Y
Sbjct: 431 IY 432
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 44/80 (55%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ +I + ++ +K + GN++KA E +++ + + N +++ ++ + +
Sbjct: 601 EATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFA 660
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L +K++ SGL PD +TYN +
Sbjct: 661 LVNKMENSGLLPDVITYNVI 680
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 43/85 (50%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
++Q + +Y++ + L K +A E++ +T+ + + +++ ++G
Sbjct: 456 LEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNM 515
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
++ LF+ + Q L PD VTYNT+
Sbjct: 516 NKAVTLFEMMIQRNLKPDVVTYNTL 540
>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 43/75 (57%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I K G +AL++ + ++F N+I+ L + G+ S++ +F +
Sbjct: 408 AYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDM 467
Query: 71 KQSGLTPDAVTYNTV 85
Q+GL+PD +TYNT+
Sbjct: 468 HQTGLSPDIITYNTL 482
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 40/82 (48%)
Query: 4 HGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESS 63
H + + +Y+ I G + AL +N + + V N +++ + G +
Sbjct: 86 HCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEA 145
Query: 64 LKLFDKIKQSGLTPDAVTYNTV 85
KLFD +K+ G +P+A+ YNT+
Sbjct: 146 RKLFDGLKEMGFSPNAIMYNTL 167
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 46/78 (58%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ ++++ I K GN ++A ++++ + + N + N +++ V+ + + + L+
Sbjct: 125 TVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLY 184
Query: 68 DKIKQSGLTPDAVTYNTV 85
+++++ G+ PD +T+N +
Sbjct: 185 EEMRKKGIAPDGITFNIL 202
Score = 34.7 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ ++S++I L K G +A ++ + + N F N ++ + GK +LKL
Sbjct: 371 VVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEK 430
Query: 69 KIKQSGLTPDAVTYNTV 85
++ GL PD T N +
Sbjct: 431 VMRHRGLLPDIFTTNMI 447
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 50/80 (62%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + ++++ I+ L K G KA+EIY+++ + N+F C++++ +++G + +++
Sbjct: 254 EPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAME 313
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L+ ++ + GL P + TY+ +
Sbjct: 314 LWKRVHKLGLVPSSTTYSVM 333
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 1 MQQHGK-TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M + G+ S +Y+ I L K G A +I+ ++ ++ ++ V N ++ L NGK
Sbjct: 176 MTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGK 235
Query: 60 FESSLKLFDKIKQSG--LTPDAVTYNTVYQS 88
+ ++KLF + + G + PD +T+NTV Q
Sbjct: 236 LDEAMKLFSSLLEDGNYVEPDVITFNTVIQG 266
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M + G + + +Y+ I L K+G + KAL++++ +T++ ++ + N++++ L + G
Sbjct: 141 MTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGC 200
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ K+F+ + + G + V+YNT+
Sbjct: 201 IGDAFKIFETMLEKGKRLEVVSYNTL 226
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
YS I K G +A + +++T+ + +V+ ++ L ++G+ +L LFD +
Sbjct: 118 YSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMT 177
Query: 72 QSGLTPDAVTYNTV 85
+ G P VTYN +
Sbjct: 178 EKGEEPSTVTYNVL 191
>gi|383132380|gb|AFG47043.1| Pinus taeda anonymous locus 0_8271_02 genomic sequence
gi|383132394|gb|AFG47050.1| Pinus taeda anonymous locus 0_8271_02 genomic sequence
Length = 112
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+ I LGK G L+A I+ + + +V + N ++ + G + +LKLF
Sbjct: 11 NVFTYTEVINGLGKAGRVLEAYRIFQDMQKDGCSPDVVMFNKLIDIMGDAGLLDDALKLF 70
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
+++ G P VTYN+V ++
Sbjct: 71 GQMETVGCNPTVVTYNSVMEA 91
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 42/74 (56%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
YS+ I ++GN +A+++Y + + F CN+++S L R+GK + K +
Sbjct: 516 YSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMS 575
Query: 72 QSGLTPDAVTYNTV 85
+ GL P+++TY+ +
Sbjct: 576 RIGLVPNSITYDCI 589
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S +Y S +K L K GN ++A + N + V+ + N +L+ ++G ++ LF
Sbjct: 617 SFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALF 676
Query: 68 DKIKQSGLTPDAVTYNTV 85
DK+ Q+ + PD+ TY+++
Sbjct: 677 DKMVQNNVLPDSYTYSSL 694
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 41/80 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + +Y+ +I L N S KA + + E N N +++ V+ GK + +
Sbjct: 300 EADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQ 359
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F+++ + L+P+ VTYN +
Sbjct: 360 VFNEMSKFDLSPNCVTYNAL 379
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 39/76 (51%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
S + I+ K G A+E + + K +V+ CN+IL+ +V++ + E LF +
Sbjct: 164 SVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFRE 223
Query: 70 IKQSGLTPDAVTYNTV 85
+ G+ P+ T+N +
Sbjct: 224 MSDKGICPNVGTFNIL 239
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+++G +I +Y++ + + K G A+E+ + + + + +V N+ + L N +
Sbjct: 259 MEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHR 318
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ L K+++ ++P+ VTYNT+
Sbjct: 319 SAKAYLLLKKMRKEMISPNEVTYNTL 344
Score = 35.0 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 37/75 (49%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I K G A +++N ++ N N ++ G FE +L+L D +
Sbjct: 340 TYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHM 399
Query: 71 KQSGLTPDAVTYNTV 85
+ +GL + VTY T+
Sbjct: 400 EAAGLRLNEVTYGTL 414
>gi|308803771|ref|XP_003079198.1| pentatricopeptide (ISS) [Ostreococcus tauri]
gi|116057653|emb|CAL53856.1| pentatricopeptide (ISS), partial [Ostreococcus tauri]
Length = 699
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 3 QHGKTSISSYSSYIKFLGKNGNSLKALEIY-NSITDESDKVNVFICNLILSCLVRNGKFE 61
Q S+ Y+S I GK G KA E++ N I++ +++ + N LS V +G+++
Sbjct: 144 QSWTPSVRVYTSLISAYGKGGQFEKASELFENIISNTQVQLDTGVYNAFLSAAVNSGRYK 203
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+ +F++++ G+ + TYN + QS
Sbjct: 204 DAAAIFERMQADGVRRNVTTYNGMLQS 230
>gi|388516039|gb|AFK46081.1| unknown [Lotus japonicus]
Length = 327
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G T + SY I K A+E S+ + ++ N ILS L +NGK
Sbjct: 156 MKEQGLTPDAYSYDPLIAAFCKESRVDLAIEFLESMISDGCLPDIVNYNTILSTLCKNGK 215
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+ +LK+F+K+ + G P+ +YNT++ +
Sbjct: 216 ADEALKIFEKLGEVGCPPNVSSYNTLFSA 244
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
NV ++++S L R+GK E ++ L +K+ GLTPDA +Y+ + +
Sbjct: 129 NVVTYSILISSLCRDGKVEEAVSLLKVMKEQGLTPDAYSYDPLIAA 174
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 43/80 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S +SYS I L + G+ A+E++ + NV+ ++S ++G + + +LF
Sbjct: 439 SAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLF 498
Query: 68 DKIKQSGLTPDAVTYNTVYQ 87
DK+ S + P+ VT+N + +
Sbjct: 499 DKMIDSSVVPNEVTFNVMIE 518
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 42/78 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ ++++ I K+GN +A +++ + D S N N+++ R G + +L+
Sbjct: 474 NVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLY 533
Query: 68 DKIKQSGLTPDAVTYNTV 85
D++ GLTPD TY ++
Sbjct: 534 DQMVDRGLTPDNYTYRSL 551
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 42/85 (49%)
Query: 4 HGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESS 63
H S++S S + L K G+ KA + + + N+F CN ++ L ++ +F +
Sbjct: 295 HFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREA 354
Query: 64 LKLFDKIKQSGLTPDAVTYNTVYQS 88
+LF + GL P+ VTY + S
Sbjct: 355 ERLFRGMANRGLEPNEVTYAILIHS 379
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ ++ FL G KA ++ +I E N N ++ + G+ + ++ L
Sbjct: 722 TYNCFLDFLANEGELEKAKVLHATIL-EGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNN 780
Query: 71 KQSGLTPDAVTYNTV 85
+SG PD ++Y+T+
Sbjct: 781 TESGFFPDCISYSTI 795
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M HG + SY+ IK + K+GN ++L + + ++ K N N+++S L + +
Sbjct: 512 MILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERR 571
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+L+L ++ GL PD VTYNT+
Sbjct: 572 VRDALELSKQMLNQGLAPDIVTYNTL 597
Score = 37.7 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 44/80 (55%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I SY++ I L N +A ++ ++ +E N N I+ L+R+G+++ +++L
Sbjct: 451 ICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAK 510
Query: 69 KIKQSGLTPDAVTYNTVYQS 88
++ G + D V+YN + ++
Sbjct: 511 EMILHGCSLDVVSYNGLIKA 530
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY+ I L K ALE+ + ++ ++ N +++ L + G ++L L +K+
Sbjct: 558 SYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKL 617
Query: 71 KQSGLTPDAVTYNTVYQSDHITW 93
+ PD +TYN + I+W
Sbjct: 618 HNENVHPDIITYNIL-----ISW 635
>gi|225447824|ref|XP_002268032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Vitis vinifera]
Length = 480
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 45/81 (55%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
GK S++ ++ I K K + +Y + + K +VF N ++S RN +F +L
Sbjct: 176 GKPSVAMHNILINGYVKCREHEKVMTVYEKMIKDRVKPDVFTFNSLISSCCRNSQFGLAL 235
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
++F ++K G +P+ V++NT+
Sbjct: 236 EMFKEMKDKGCSPNVVSFNTL 256
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M HG + SY+ IK + K+GN ++L + + ++ K N N+++S L + +
Sbjct: 496 MILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERR 555
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+L+L ++ GL PD VTYNT+
Sbjct: 556 VRDALELSKQMLNQGLAPDIVTYNTL 581
Score = 37.7 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 44/80 (55%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I SY++ I L N +A ++ ++ +E N N I+ L+R+G+++ +++L
Sbjct: 435 ICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAK 494
Query: 69 KIKQSGLTPDAVTYNTVYQS 88
++ G + D V+YN + ++
Sbjct: 495 EMILHGCSLDVVSYNGLIKA 514
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY+ I L K ALE+ + ++ ++ N +++ L + G ++L L +K+
Sbjct: 542 SYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKL 601
Query: 71 KQSGLTPDAVTYNTVYQSDHITW 93
+ PD +TYN + I+W
Sbjct: 602 HNENVHPDIITYNIL-----ISW 619
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M HG + SY+ IK + K+GN ++L + + ++ K N N+++S L + +
Sbjct: 512 MILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERR 571
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+L+L ++ GL PD VTYNT+
Sbjct: 572 VRDALELSKQMLNQGLAPDIVTYNTL 597
Score = 37.7 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 44/80 (55%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I SY++ I L N +A ++ ++ +E N N I+ L+R+G+++ +++L
Sbjct: 451 ICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAK 510
Query: 69 KIKQSGLTPDAVTYNTVYQS 88
++ G + D V+YN + ++
Sbjct: 511 EMILHGCSLDVVSYNGLIKA 530
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY+ I L K ALE+ + ++ ++ N +++ L + G ++L L +K+
Sbjct: 558 SYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKL 617
Query: 71 KQSGLTPDAVTYNTVYQSDHITW 93
+ PD +TYN + I+W
Sbjct: 618 HNENVHPDIITYNIL-----ISW 635
>gi|242056929|ref|XP_002457610.1| hypothetical protein SORBIDRAFT_03g010260 [Sorghum bicolor]
gi|241929585|gb|EES02730.1| hypothetical protein SORBIDRAFT_03g010260 [Sorghum bicolor]
Length = 1089
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 41/81 (50%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
+Q G ++ YS + L K G KAL++ S+ E N+ I N +LS L G
Sbjct: 714 EQSGLVDLAMYSIVVDGLCKGGYLEKALDLCESMKKEGFHPNIIIHNSVLSGLCHQGCLT 773
Query: 62 SSLKLFDKIKQSGLTPDAVTY 82
+ +LFD ++ S + P +TY
Sbjct: 774 EAFRLFDYLENSNMLPTIITY 794
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
++ HG S S+Y + L +G AL ++ +T +V +C+ I+S R GK
Sbjct: 124 IEDHGMVLSPSTYRVMVVLLCAHGEVDCALRVFEVMTRRGCQVEDRVCSSIISGFSRTGK 183
Query: 60 FESSLKLFDKIKQ--SGLTPDAVTYNTVYQS 88
+ L ++K+K+ SG P VT +V +
Sbjct: 184 AGAGLDFYEKVKRQFSGFDPGLVTLTSVVHA 214
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 31/116 (26%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDES-------------------- 39
M+ G K SI +Y++ I L K G++ KALEI + ++
Sbjct: 371 MENKGIKASIITYNAIINGLCKAGHTEKALEISEGVAADNFTYSTLLHGYINRGDITGVM 430
Query: 40 ---DK-------VNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
D+ ++V CN+++ K + LF K+ + GL P+ +TY+T+
Sbjct: 431 AIKDRLEGSGISIDVVTCNVLIKASFMINKVNDAWSLFHKMPEMGLRPNTITYHTI 486
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 2 QQHGKTSISSYSS-YIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
Q H ++ S +S I LG+ G AL+++N NV+ + ++S R+G+
Sbjct: 191 QGHLRSEWSKLASIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRC 250
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+LK+F +K++G P+ +TYNT+
Sbjct: 251 REALKVFQAMKKAGCKPNLITYNTI 275
Score = 42.4 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G + I +Y++ I + K G A I +S+ ++ NV + ++ + G
Sbjct: 331 MQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGC 390
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
FE ++ L+ +K+SG+ PD V+YNT+
Sbjct: 391 FEEAIGLYHDMKESGVRPDRVSYNTL 416
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLK-ALEIYNSITDESDKVNVFICNLILSCLVRNG 58
M++ G K ++ +Y++ I GK G LK AL+I+ + E + + N +++ R
Sbjct: 260 MKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGS 319
Query: 59 KFESSLKLFDKIKQSGLTPDAVTYNTV 85
+E S ++F ++++ G+ D TYNT+
Sbjct: 320 LWEDSQRVFAEMQRRGIEQDIFTYNTL 346
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 37/75 (49%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ I K G AL + K +V N ++ + GK++ + LFDK+
Sbjct: 412 SYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKM 471
Query: 71 KQSGLTPDAVTYNTV 85
K GL P+ +TY+ +
Sbjct: 472 KAEGLVPNVLTYSAL 486
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 41/83 (49%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y++ I GK G A +++ + E NV + ++ + G + +
Sbjct: 442 KADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATS 501
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
+F + K++GL PD V Y+++ S
Sbjct: 502 IFVEFKRAGLKPDVVLYSSLIDS 524
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 41/78 (52%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +YS+ I GK G +A+ +Y+ + + + + N ++ + G+F+ +L
Sbjct: 374 NVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTAC 433
Query: 68 DKIKQSGLTPDAVTYNTV 85
+++ GL D VTYN +
Sbjct: 434 KDMERVGLKADVVTYNAL 451
Score = 34.7 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 39/78 (50%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +YS+ I K G A I+ K +V + + ++ + G E ++ L
Sbjct: 479 NVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLL 538
Query: 68 DKIKQSGLTPDAVTYNTV 85
++ Q+G+ P+ VTYN++
Sbjct: 539 QEMTQAGIQPNIVTYNSL 556
>gi|326531326|dbj|BAK05014.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 537
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y ++I L K G A++++ S+ ++ +V ICN I+ L K +LK
Sbjct: 284 KPDLFTYGTFINALTKAGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKKIPEALK 343
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F ++ G D TYNT+
Sbjct: 344 IFGEMNDRGCQADVATYNTL 363
Score = 34.7 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 23 GNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTY 82
G+ A ++N I K ++F ++ L + GK +++KLF + + G+ PD
Sbjct: 266 GSLPDAKRVWNEIIASKLKPDLFTYGTFINALTKAGKLSTAVKLFTSMWEKGINPDVAIC 325
Query: 83 NTV 85
N +
Sbjct: 326 NCI 328
>gi|357491823|ref|XP_003616199.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355517534|gb|AES99157.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 872
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 47/85 (55%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
++++ + +YS+ I K NS KA++++ +T N+ ++ +RN K
Sbjct: 630 LKRNVLPGVVNYSTLISCFAKQTNSKKAVKLFTRMTKVGITFNIKTHTALIDLCIRNCKI 689
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + LF+ +++ G+ PD +TYNT+
Sbjct: 690 DKACDLFEDMEKRGVHPDQITYNTL 714
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 3 QHGKTS-ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
+ G+T + +YS+YIK L K G+ ++ ++ E+ +N N I+ L + G+ +
Sbjct: 196 RSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELD 255
Query: 62 SSLKLFDKIKQSGLTPDAVTY 82
+ ++ +++K G+ PD Y
Sbjct: 256 EASQVLEEMKSIGILPDVYGY 276
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 4 HGKT----SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
HG+T ++ +++S I L K G +A ++ + + + N+ NL++ L+R K
Sbjct: 316 HGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHK 375
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +++L D++ SGL PD+ TY+ +
Sbjct: 376 VKKAMELMDEMASSGLEPDSFTYSIL 401
Score = 41.2 bits (95), Expect = 0.070, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 41/74 (55%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I L + G KA ++ + + + + NV N++++ + + G + ++ L + +
Sbjct: 221 YTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNML 280
Query: 72 QSGLTPDAVTYNTV 85
+ G+ DAVTYNT+
Sbjct: 281 EKGVALDAVTYNTL 294
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ G + + +Y + I+ L + KA+E+ + + + NV + + +L + G+
Sbjct: 139 MQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGR 198
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+E K+F+++ G+ PD V Y + S
Sbjct: 199 WECVSKVFEEMSGRGIEPDVVMYTGLIDS 227
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 39/77 (50%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
YS ++ K G +++ ++ + +V + ++ L R GK + + ++ DK+
Sbjct: 186 YSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMM 245
Query: 72 QSGLTPDAVTYNTVYQS 88
+ GL P+ VTYN + S
Sbjct: 246 ERGLEPNVVTYNVLINS 262
>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 889
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 43/75 (57%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I K G +AL++ + ++F N+I+ L + G+ S++ +F +
Sbjct: 618 AYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDM 677
Query: 71 KQSGLTPDAVTYNTV 85
Q+GL+PD +TYNT+
Sbjct: 678 HQTGLSPDIITYNTL 692
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 40/82 (48%)
Query: 4 HGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESS 63
H + + +Y+ I G + AL +N + + V N +++ + G +
Sbjct: 296 HCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEA 355
Query: 64 LKLFDKIKQSGLTPDAVTYNTV 85
KLFD +K+ G +P+A+ YNT+
Sbjct: 356 RKLFDGLKEMGFSPNAIMYNTL 377
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 46/78 (58%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ ++++ I K GN ++A ++++ + + N + N +++ V+ + + + L+
Sbjct: 335 TVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLY 394
Query: 68 DKIKQSGLTPDAVTYNTV 85
+++++ G+ PD +T+N +
Sbjct: 395 EEMRKKGIAPDGITFNIL 412
Score = 34.3 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ ++S++I L K G +A ++ + + N F N ++ + GK +LKL
Sbjct: 581 VVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEK 640
Query: 69 KIKQSGLTPDAVTYNTV 85
++ GL PD T N +
Sbjct: 641 VMRHRGLLPDIFTTNMI 657
>gi|449458524|ref|XP_004146997.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Cucumis sativus]
Length = 481
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K SYS I L K G A E + ++ E + NV CN+++ R + + +
Sbjct: 373 KLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANI 432
Query: 66 LF---DKIKQSGLTPDAVTYNTVYQ 87
LF +K++++G TPD +TYNT+ +
Sbjct: 433 LFEKMEKMEENGCTPDIITYNTLLR 457
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 39/85 (45%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
M+ H ISS++ + L K + + +YN + ++F N++ +CL +
Sbjct: 82 MRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSPDLFTLNILANCLCNLNRV 141
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
L I + G PD VTYNT+
Sbjct: 142 SEGLAAMTGILRRGYIPDIVTYNTL 166
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 41/74 (55%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y ++ L KNG +A+E++N + + K++ + ++ L + GK E + + F ++
Sbjct: 344 YVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLS 403
Query: 72 QSGLTPDAVTYNTV 85
Q GL P+ VT N +
Sbjct: 404 QEGLQPNVVTCNIM 417
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 39/77 (50%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ ++ GK GN +AL + + + + + N + R G +E + K D
Sbjct: 279 VVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLD 338
Query: 69 KIKQSGLTPDAVTYNTV 85
+ GL P+A TYNTV
Sbjct: 339 TMTSKGLLPNAFTYNTV 355
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
++ I N +LS +NG + ++FD IKQSGL+PD +TYN++
Sbjct: 593 DLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSL 635
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+Q G + +Y+ + G +A + +++T + N F N +++ GK
Sbjct: 305 MEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGK 364
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +L LFD++K+SG P+ TYN +
Sbjct: 365 VDEALALFDQMKKSGCVPNVNTYNFI 390
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + G G +AL +++ + NV N IL L + +F L++ ++
Sbjct: 351 TYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEM 410
Query: 71 KQSGLTPDAVTYNTV 85
+SG TP+ VT+NT+
Sbjct: 411 SRSGCTPNRVTWNTM 425
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 38/74 (51%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
++S + KNG K EI++SI ++ N ++ + + + K+ +++K
Sbjct: 597 FNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLK 656
Query: 72 QSGLTPDAVTYNTV 85
S + PD V+YNTV
Sbjct: 657 SSQVKPDVVSYNTV 670
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSIT-DESDKVNVFICNLILSCLVRNGKFESS 63
G S+ ++ LG+ G + + + +++V +L L R G++E +
Sbjct: 133 GAADASALEMVVRALGREGQHDAVCALLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERA 192
Query: 64 LKLFDKIKQSGLTPDAVTYNTV 85
++LF ++++ G+ P VTYN V
Sbjct: 193 VELFAELRRQGVAPTLVTYNVV 214
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 40/80 (50%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S +Y++ I G+ G+ A ++YN +T + N +L+ L R G + ++ +
Sbjct: 453 SRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIV 512
Query: 68 DKIKQSGLTPDAVTYNTVYQ 87
K++ G P+ +Y+ + Q
Sbjct: 513 SKMRTKGFKPNDQSYSLLLQ 532
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 43/75 (57%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y + I L K GNS A+ + S+ ++ + NV N I+ CL ++ + +L +F ++
Sbjct: 181 TYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEM 240
Query: 71 KQSGLTPDAVTYNTV 85
G++P+ TYN++
Sbjct: 241 IAKGISPNVSTYNSI 255
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 40/77 (51%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I SY+ I + + G A ++++S++ + +V+ ++++ L G + KLF
Sbjct: 459 IQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFR 518
Query: 69 KIKQSGLTPDAVTYNTV 85
++ G +PD TYN +
Sbjct: 519 EMNTDGCSPDDCTYNLI 535
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 44/75 (58%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I L K GN A ++ +T+++ + + N+ ++CL GK + + +++
Sbjct: 526 NYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEM 585
Query: 71 KQSGLTPDAVTYNTV 85
+ +GL PD VTYNT+
Sbjct: 586 QSTGLKPDQVTYNTM 600
Score = 41.6 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 36/58 (62%)
Query: 28 ALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
AL++Y+ + E +VN FI + +++ L +NGK E + LF ++ + G+ D V Y T+
Sbjct: 473 ALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTL 530
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 19 LGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPD 78
LGK+ + LE S + D+V N +++ R GK +LKL + +K+S + P+
Sbjct: 572 LGKSKEAESFLEEMQSTGLKPDQVTY---NTMIAAQSREGKTAKALKLLNGMKRSSIKPN 628
Query: 79 AVTYNTV 85
+TY+T+
Sbjct: 629 LITYSTL 635
>gi|302769928|ref|XP_002968383.1| hypothetical protein SELMODRAFT_169661 [Selaginella moellendorffii]
gi|300164027|gb|EFJ30637.1| hypothetical protein SELMODRAFT_169661 [Selaginella moellendorffii]
Length = 532
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY I G+ G++ KA I+ + +NV++CN +++ G + L+L+ ++
Sbjct: 214 SYCILIDACGRCGDTEKATAIFEGLLKAGTVLNVYVCNSMMN--AHAGNIQHVLRLYRQM 271
Query: 71 KQSGLTPDAVTYNTVYQS 88
+ SG+ D TYN V+++
Sbjct: 272 QGSGIAADVTTYNIVFKA 289
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 18/99 (18%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +++S + K K L++Y + N F N +LS V G+ + + KLF
Sbjct: 349 NVVTWTSLVGACSKGALVEKTLQVYQDMVQAGCTPNAFTYNFLLSACVDGGQSDKAHKLF 408
Query: 68 DKIKQSG------------------LTPDAVTYNTVYQS 88
+ K SG + PD+V YNT+ ++
Sbjct: 409 REWKTSGRILAGIEVQDESVIFSEWVRPDSVAYNTMMRA 447
>gi|255544732|ref|XP_002513427.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547335|gb|EEF48830.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 567
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 41/79 (51%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
+SY+ + L K GN A+++ + D N N ++ L +G SL+ D+
Sbjct: 133 ASYTFLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDR 192
Query: 70 IKQSGLTPDAVTYNTVYQS 88
+ Q GL P+A TY+++ ++
Sbjct: 193 LMQKGLVPNAFTYSSLLEA 211
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 44/78 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YSS ++ K +A+ + + I + + N+ N++L+ L + G+ E +++LF +
Sbjct: 204 TYSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEEAIRLFKNL 263
Query: 71 KQSGLTPDAVTYNTVYQS 88
G +P+ V+YN + +S
Sbjct: 264 PSKGFSPNVVSYNILLRS 281
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 43/84 (51%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
G+ ++ SY+ + L K G +A+ ++ ++ + NV N++L L G++E +
Sbjct: 233 GQPNLVSYNVLLTGLCKEGRIEEAIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEAN 292
Query: 65 KLFDKIKQSGLTPDAVTYNTVYQS 88
+L ++ +P VTYN + S
Sbjct: 293 ELLAEMNGRERSPSIVTYNILIGS 316
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M ++G T S +YSS I+ L G +A+EI+ + ++ + ++ N ++ ++ +
Sbjct: 437 MTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFKLLEEDHYRPDIDNFNALILGFCKSHR 496
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
+ SL++F+ + + G TP TY + +
Sbjct: 497 TDLSLEVFEMMIEKGYTPSETTYTILVE 524
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKV--NVFICNLILSCLVRNGKFESSLKLFD 68
SY++ +K L ++ S +AL++ +++ +S NV N ++ L R G+ + LF
Sbjct: 192 SYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFH 251
Query: 69 KIKQSGLTPDAVTYNTV 85
++ Q G+ PD VTY ++
Sbjct: 252 EMMQQGVVPDVVTYTSI 268
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 43/80 (53%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ +I ++S I L K G ++A +I++ + ++ +V N ++ GK E +
Sbjct: 505 RPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFG 564
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+ D + +G+ PD V+YNT+
Sbjct: 565 VLDAMISAGIEPDVVSYNTL 584
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 42/78 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I + +SY+ L K+G S +A E ++S+ + K N+ +++L G F L LF
Sbjct: 331 NIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLF 390
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ ++ +G+ D +N V
Sbjct: 391 NSMEGNGIVADQRVFNIV 408
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M + G T IS+ + L +N +A+ ++ + + K N+ I N ++ + + K
Sbjct: 639 MIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRK 698
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
E + +LFD I +GL P+A TY + ++
Sbjct: 699 REEAKELFDSISATGLVPNASTYGVMIKN 727
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 37/75 (49%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I +G + ++ +T + N+ CN +S L ++GK + + + FD +
Sbjct: 299 TYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSM 358
Query: 71 KQSGLTPDAVTYNTV 85
G P+ VTY+ +
Sbjct: 359 AAKGHKPNLVTYSVL 373
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 40/80 (50%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ +YS + G + L ++NS+ + + N+++ + G + ++
Sbjct: 364 KPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETML 423
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F ++++ G+ PDA TY V
Sbjct: 424 IFTQMQEQGVIPDACTYGIV 443
Score = 34.3 bits (77), Expect = 8.5, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 38/80 (47%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + +++S I G G KA + +++ + +V N ++ RNG+ + L
Sbjct: 540 RPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLI 599
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LF ++ G+ P +TY +
Sbjct: 600 LFGEMLSKGVKPTTITYGII 619
>gi|302765062|ref|XP_002965952.1| hypothetical protein SELMODRAFT_84012 [Selaginella moellendorffii]
gi|300166766|gb|EFJ33372.1| hypothetical protein SELMODRAFT_84012 [Selaginella moellendorffii]
Length = 533
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + SY I G+ G++ KA I+ + +NV++CN +++ G + L+
Sbjct: 209 RPDMYSYCILIDACGRCGDAEKATAIFEGLLKAGTVLNVYVCNSMMN--AHAGNIQHVLR 266
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
L+ +++ SG+ D TYN V+++
Sbjct: 267 LYRQMQGSGIAADVTTYNIVFKA 289
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 18/99 (18%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +++S + K K L++Y + N F N +LS V G+ + + KLF
Sbjct: 350 NVVTWTSLVGACSKGALVEKTLQVYQDMVQAGCTPNAFTYNFLLSACVDGGQSDKAHKLF 409
Query: 68 DKIKQSG------------------LTPDAVTYNTVYQS 88
+ K SG + PD+V YNT+ ++
Sbjct: 410 REWKTSGRILAGIEVQDESAIFSEWVRPDSVAYNTMMRA 448
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 2 QQHGKTSISSYSS-YIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
Q H ++ S +S I LG+ G AL+++N NV+ + ++S R+G+
Sbjct: 192 QVHLRSEWSKLASIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRC 251
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+LK+F +K++G P+ +TYNT+
Sbjct: 252 REALKVFQAMKKAGCKPNLITYNTI 276
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLK-ALEIYNSITDESDKVNVFICNLILSCLVRNG 58
M++ G K ++ +Y++ I GK G LK AL+I++ + E + + N +++ R G
Sbjct: 261 MKKAGCKPNLITYNTIIDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGG 320
Query: 59 KFESSLKLFDKIKQSGLTPDAVTYNTV 85
+E S ++F ++++ G+ D T+NT+
Sbjct: 321 LWEDSQRVFAEMQRRGIEQDIFTFNTL 347
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G + I ++++ I + K G A I ++ ++ NV + ++ + G
Sbjct: 332 MQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGC 391
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
FE ++ L+ +K+SG+ PD V+YNT+
Sbjct: 392 FEEAISLYHDMKESGVRPDRVSYNTL 417
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ I K G AL + K +V N ++ + GK++ + LFDK+
Sbjct: 413 SYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKM 472
Query: 71 KQSGLTPDAVTYNTVYQS 88
K GL P+ +TY+ + S
Sbjct: 473 KGEGLVPNVLTYSALIDS 490
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 40/83 (48%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y++ I GK G A +++ + E NV + ++ + G +
Sbjct: 443 KADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSN 502
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
+F + K++GL PD V Y+++ S
Sbjct: 503 VFTEFKRAGLKPDVVLYSSLIDS 525
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 41/78 (52%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +YS+ I GK G +A+ +Y+ + + + + N ++ + G+F+ +L
Sbjct: 375 NVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIAC 434
Query: 68 DKIKQSGLTPDAVTYNTV 85
+++ GL D VTYN +
Sbjct: 435 KDMERVGLKADVVTYNAL 452
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 42/74 (56%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
YS+ I ++GN +A+++Y + + F CN+++S L R+GK + K +
Sbjct: 1267 YSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMS 1326
Query: 72 QSGLTPDAVTYNTV 85
+ GL P+++TY+ +
Sbjct: 1327 RIGLVPNSITYDCI 1340
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 3 QHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFES 62
QH S +Y S +K L K GN ++A + N + V+ + N +L+ ++G
Sbjct: 1365 QH--PSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHE 1422
Query: 63 SLKLFDKIKQSGLTPDAVTYNTV 85
++ LFDK+ Q+ + PD+ TY+++
Sbjct: 1423 AVALFDKMVQNNVLPDSYTYSSL 1445
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
S + I+ K G A+E + + K +V+ CN+IL+ +V++ + E LF +
Sbjct: 915 SVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFRE 974
Query: 70 IKQSGLTPDAVTYNTV 85
+ G+ P+ T+N +
Sbjct: 975 MSDKGICPNVGTFNIL 990
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 41/80 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + +Y+ +I L N S KA + + E N N +++ V+ GK + +
Sbjct: 1051 EADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQ 1110
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F+++ + L+P+ VTYN +
Sbjct: 1111 VFNEMSKFDLSPNCVTYNAL 1130
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I K G A +++N ++ N N ++ G FE +L+L D +
Sbjct: 1091 TYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHM 1150
Query: 71 KQSGLTPDAVTYNTV 85
+ +GL + VTY T+
Sbjct: 1151 EAAGLRLNEVTYGTL 1165
>gi|449449679|ref|XP_004142592.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Cucumis sativus]
gi|449516715|ref|XP_004165392.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Cucumis sativus]
Length = 594
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I+ + K+ ++ ALE+ + +E ++ N +++ + GKFE + + D +
Sbjct: 279 TYTILIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSLINLTCKQGKFEDAALVIDNL 338
Query: 71 KQSGLTPDAVTYNTVYQS 88
G+ PDAVTYNT+ S
Sbjct: 339 LFHGMVPDAVTYNTLLHS 356
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVY 86
KA+++ + ++ N+++ CL + G ES+++L + + SG PD +TYN V
Sbjct: 190 KAVQVLKIMVMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVI 249
Query: 87 Q 87
+
Sbjct: 250 R 250
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y++ + L K G +A ++ + +TD + + N +L L R G + ++ L+
Sbjct: 417 IITYNTLLGALCKEGMVDEAFQLLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYS 476
Query: 69 KIKQSGLTPDAVTYNTV 85
++ ++G+ PD T+ ++
Sbjct: 477 QMMENGIIPDDTTHRSI 493
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + L + G+ + EI ++ V CN++++ L +NG +S++ +++
Sbjct: 349 TYNTLLHSLSRRGHWDEVDEILKIMSISLQPPTVVTCNVLINGLCKNGLLDSAINFLNQM 408
Query: 71 KQSGLTPDAVTYNTV 85
PD +TYNT+
Sbjct: 409 FSYNCLPDIITYNTL 423
>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Brachypodium distachyon]
Length = 673
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M HG I SY+ IK L ++GN +++ + + + ++ K N NL++S L + +
Sbjct: 509 MVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRR 568
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+L+L ++ LTPD VTYNT+
Sbjct: 569 VRDALELSKEMLNQELTPDIVTYNTL 594
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 40/73 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I L +NG+ A+ + N + +++ N ++ L R+G + S+ L ++
Sbjct: 485 TYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEM 544
Query: 71 KQSGLTPDAVTYN 83
+ G+ P+ V+YN
Sbjct: 545 AEKGIKPNNVSYN 557
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G K I +Y++ I L N +A ++ ++ E N N ++ L+RNG
Sbjct: 439 MKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGS 498
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
++ ++ L + + G + D V+YN + ++
Sbjct: 499 WQDAISLANDMVLHGCSLDIVSYNGLIKA 527
>gi|296081510|emb|CBI20033.3| unnamed protein product [Vitis vinifera]
Length = 481
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 45/81 (55%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
GK S++ ++ I K K + +Y + + K +VF N ++S RN +F +L
Sbjct: 177 GKPSVAMHNILINGYVKCREHEKVMTVYEKMIKDRVKPDVFTFNSLISSCCRNSQFGLAL 236
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
++F ++K G +P+ V++NT+
Sbjct: 237 EMFKEMKDKGCSPNVVSFNTL 257
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +YS+ I L KNG + +A+ ++ +VF+ N ++S + G E + +L+D
Sbjct: 626 IRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYD 685
Query: 69 KIKQSGLTPDAVTYNTV 85
++ +G+ P+ V YNT+
Sbjct: 686 EMLHNGINPNIVVYNTL 702
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I K GN +AL I + + K+NV N ++ + + G+ ++ LF+++
Sbjct: 348 TYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEM 407
Query: 71 KQSGLTPDAVTYN 83
+G+ PD TYN
Sbjct: 408 LMAGIEPDTWTYN 420
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 45/87 (51%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
QQ S+S+++S I K+G ++A E+++ + D+ N+ +++ + E
Sbjct: 760 QQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMME 819
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+ +LF ++ + P+ +TY ++ S
Sbjct: 820 EAEQLFLDMETRNIIPNTLTYTSLLLS 846
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 41/74 (55%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ IK GN+++AL + + ++ ++ + I+ L +NGK + ++ +F K
Sbjct: 594 YTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFL 653
Query: 72 QSGLTPDAVTYNTV 85
++G+ PD YN++
Sbjct: 654 KTGVVPDVFLYNSL 667
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+S + L K +E Y ++ ++ N+F N++L L R K + +L L +
Sbjct: 496 VYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLE 555
Query: 69 KIKQSGLTPDAVTYNTV 85
++K + PDAVT+ T+
Sbjct: 556 EMKNKSVNPDAVTFGTL 572
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ +I+ L + G A+ + + D+ K +V N ++ L +N KF+ + K+
Sbjct: 253 TYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKL 312
Query: 71 KQSGLTPDAVTYNTV 85
GL PD+ TYNT+
Sbjct: 313 VNEGLEPDSFTYNTL 327
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y +K G+ G +A+ ++ + + VF N I+S LV +G F+ + K++ +++
Sbjct: 79 YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMR 138
Query: 72 QSGLTPDAVTYNTVYQS 88
G+TPD ++ +S
Sbjct: 139 DRGITPDVYSFTIRMKS 155
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 39/75 (52%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+S+++ + L K G+ + ++ + + N+F N + L + G+ ++++++
Sbjct: 216 LSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVG 275
Query: 69 KIKQSGLTPDAVTYN 83
++ G PD VTYN
Sbjct: 276 RLIDQGPKPDVVTYN 290
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 33/61 (54%)
Query: 28 ALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
ALEI + + D +V+ N +L+ L + K+E ++ + + + G P+ T+N + +
Sbjct: 480 ALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLE 539
Query: 88 S 88
S
Sbjct: 540 S 540
>gi|303271265|ref|XP_003054994.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462968|gb|EEH60246.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 115
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
K G K +EI++++ ++ +VN + N S V+ GK+E +L+LFD + G +
Sbjct: 14 KKGEWSKCVEIFDAMREQGVEVNTIVVNATASACVKWGKWERALELFDSMPADGHERTTI 73
Query: 81 TYN 83
TYN
Sbjct: 74 TYN 76
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 36/65 (55%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
K G +ALE+++S+ + + N+ + +R G + +L+LFD++ + G+ D V
Sbjct: 49 KWGKWERALELFDSMPADGHERTTITYNVAMGACMRGGLWSRALELFDEMPRVGVPRDHV 108
Query: 81 TYNTV 85
+ NT
Sbjct: 109 SVNTA 113
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQQ G K+ + S+ S +K KNG +A+ I + + + N + N I+ + +G
Sbjct: 287 MQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGD 346
Query: 60 FESSLKLFDKIKQSGLTPDAVTYN 83
E + L +K+K SG++ VTYN
Sbjct: 347 TEQAFLLVEKMKNSGVSASIVTYN 370
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 30/43 (69%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
+ F N++++ L R+GK +LK+FD++ G+ P+ +TYNT+
Sbjct: 15 DAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTM 57
Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS L + G S L ++ + + + C+++L+ L ++GK + ++ + +
Sbjct: 123 TYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEML 182
Query: 71 KQSGLTPDAVTYNTV 85
+GL P V YNT+
Sbjct: 183 VHTGLVPTTVIYNTL 197
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 38/76 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I K G+ + + + + K N+ N++LS L R G+ + + L D++
Sbjct: 53 TYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEM 112
Query: 71 KQSGLTPDAVTYNTVY 86
+ PD TY+ ++
Sbjct: 113 ASHSMFPDGFTYSILF 128
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +YS+ I L KNG + +A+ ++ +VF+ N ++S + G E + +L+D
Sbjct: 626 IRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYD 685
Query: 69 KIKQSGLTPDAVTYNTV 85
++ +G+ P+ V YNT+
Sbjct: 686 EMLHNGINPNIVVYNTL 702
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+S I K G+ KA ++Y+ + N+ + N +++ L + G+ + +LFD+I+
Sbjct: 664 YNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIE 723
Query: 72 QSGLTPDAVTYNTV 85
+ L PD VTY+T+
Sbjct: 724 EKDLVPDVVTYSTI 737
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I K GN +AL I + + K+NV N ++ + + G+ ++ LF+++
Sbjct: 348 TYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEM 407
Query: 71 KQSGLTPDAVTYN 83
+GL PD TYN
Sbjct: 408 LMAGLEPDTWTYN 420
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I Y++ I L K G KA E+++ I ++ +V + I+ ++G + KLF
Sbjct: 695 NIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLF 754
Query: 68 DKIKQSGLTPDAVTY 82
D++ G++PD Y
Sbjct: 755 DEMISKGISPDGYIY 769
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 45/87 (51%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
QQ S+S+++S I K+G ++A E+++ + D+ N+ +++ + E
Sbjct: 793 QQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMME 852
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+ +LF ++ + P+ +TY ++ S
Sbjct: 853 EAEQLFLDMETRNIIPNTLTYTSLLLS 879
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 41/74 (55%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ IK GN+++AL + + ++ ++ + I+ L +NGK + ++ +F K
Sbjct: 594 YTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFL 653
Query: 72 QSGLTPDAVTYNTV 85
++G+ PD YN++
Sbjct: 654 KTGVVPDVFLYNSL 667
>gi|298712109|emb|CBJ32990.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 650
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
++S+ I+ K GN K +E+ + D + F N L VRNG +++L + + +
Sbjct: 95 TFSALIEACSKGGNVAKGVELLREMVDAGVARDCFSYNAALHGFVRNGDSKNALLMLEDM 154
Query: 71 KQSGLTPDAVTYNTV 85
G+ PDA+TY T+
Sbjct: 155 VADGVRPDAITYGTL 169
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 44/78 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ + +NG+S AL + + + + + +L+C +G+++ + L D++
Sbjct: 130 SYNAALHGFVRNGDSKNALLMLEDMVADGVRPDAITYGTLLACCGNSGEWKLCMSLMDRM 189
Query: 71 KQSGLTPDAVTYNTVYQS 88
+ G+TP+A +++ + ++
Sbjct: 190 RSEGITPNAYSFSPLIKA 207
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICN-LILSCLVRNG 58
M+ +G + + S++ I + G+ A + + + N N +I SC R G
Sbjct: 438 MENNGVELDVMSFNILIDACARGGSHWAAARLLTKMKSLGLRPNSLSYNPIIHSC--RGG 495
Query: 59 KFES---SLKLFDKIKQSGLTPDAVTYNTVYQS 88
E +L L D++++SGLTPD +++NT S
Sbjct: 496 TDEEWRLALDLLDEMRKSGLTPDVISFNTAITS 528
>gi|255660970|gb|ACU25654.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 350
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ G +YS+ I L K N +A+ + N + K NV + N +++ LV KFE
Sbjct: 96 QKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFE 155
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
++++F ++ +P +TYNT+
Sbjct: 156 DAIRVFREMGTMHCSPTIITYNTL 179
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 45/81 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+ +YS ++ L + +AL+++N +T + K +V + N+++ L GK + +L L+
Sbjct: 207 GVITYSMLMEGLCFDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLY 266
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
+ + P+ V++NT+ +
Sbjct: 267 FDMNRWKCAPNLVSHNTLMEG 287
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS+ + LGK+G +A +++ + D V++ N +L+ L + G + KL ++
Sbjct: 242 TYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEM 301
Query: 71 KQSGLTPDAVTYNTV 85
+ G PDA ++NT+
Sbjct: 302 SRKGFHPDAFSFNTI 316
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 41/73 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I++ G++G A+E++ + + + + + +++ L + G+ + + FD +
Sbjct: 102 AYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAM 161
Query: 71 KQSGLTPDAVTYN 83
+ GLTP+ TYN
Sbjct: 162 LERGLTPNIPTYN 174
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y + LGK G +A ++++ + N+ NL++ + G+ + +L LF ++
Sbjct: 137 TYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEM 196
Query: 71 KQSGLTPDAVTYNTV 85
K+ G P VTYN +
Sbjct: 197 KRRGFQPSVVTYNIL 211
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 42/75 (56%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +++ I L +G +A +Y + + +++ F N+++ R+G+ +S++++F
Sbjct: 64 TVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMF 123
Query: 68 DKIKQSGLTPDAVTY 82
++K G PD TY
Sbjct: 124 REMKIKGSEPDEYTY 138
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 42/78 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S + L K GN + ++ ++ + + F N I+ L + K +++ ++F ++
Sbjct: 277 NYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARM 336
Query: 71 KQSGLTPDAVTYNTVYQS 88
+SG PD ++YN + S
Sbjct: 337 VESGCKPDLISYNILIDS 354
Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M + G T +I +Y+ + K G AL ++ + + +V N++L L G+
Sbjct: 161 MLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGR 220
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
++ KLF K+ G +PD+ TY+T+
Sbjct: 221 VGAARKLFHKMTGDGCSPDSYTYSTL 246
Score = 37.7 bits (86), Expect = 0.96, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 38/72 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I +L +G +A + + + +V N ++ L + G+ + + +LF ++
Sbjct: 382 TYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQM 441
Query: 71 KQSGLTPDAVTY 82
K G+ PD ++Y
Sbjct: 442 KDKGVEPDTLSY 453
>gi|145346927|ref|XP_001417933.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578161|gb|ABO96226.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 536
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESD-KVNVFICNLILSCLVRNGKFESSLKL 66
S+ Y+S I GK G KA E++ S+ S +++ + N +LS V +G+++ + +
Sbjct: 118 SVRVYTSLISAYGKGGQFEKASELFESLFASSHVQLDTGVYNALLSAAVNSGRYKDAAAV 177
Query: 67 FDKIKQSGLTPDAVTYNTVYQS 88
F++++ G+ + TYN + QS
Sbjct: 178 FERMQTEGVRRNVTTYNGMLQS 199
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ IK K GN K LE+Y + + + CN++++ L + GK +++ +
Sbjct: 567 TYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDA 626
Query: 71 KQSGLTPDAVTYNTV 85
G PD VTYN+V
Sbjct: 627 INRGFVPDIVTYNSV 641
Score = 34.3 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 42/83 (50%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y+S I L K +A +++++ + N N ++ L+R G F+ +L
Sbjct: 492 KPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALT 551
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
L + + G T D +TYN + ++
Sbjct: 552 LVNDMLFRGCTLDKITYNGLIKA 574
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 43/77 (55%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
++ ++F + G +A+E+ + +++ N +CN++++ + + G+ + + + + +
Sbjct: 279 TFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNM 338
Query: 71 KQSGLTPDAVTYNTVYQ 87
G +PD ++Y TV +
Sbjct: 339 GSYGCSPDTISYTTVLK 355
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I+ L G AL + + + + +V ++L + ++ F ++K+ D++
Sbjct: 139 TYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEM 198
Query: 71 KQSGLTPDAVTYNTV 85
+ G TP+ VTYN +
Sbjct: 199 RAKGCTPNIVTYNVI 213
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 48/87 (55%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+++ + S+ +Y+ ++ + K+ +A+++ + + + N+ N+I++ + R +
Sbjct: 164 LRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRV 223
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
+ + ++ +++ G PD V+Y TV +
Sbjct: 224 DDARQILNRLSSYGFQPDTVSYTTVLK 250
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+HG I+SY+ + L K G +A+E+ +++ + + +V N +L L G
Sbjct: 504 MQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGM 563
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
FE + KL ++ G D +TY+++ ++
Sbjct: 564 FEEASKLMKEMNTLGFEYDLITYSSILEA 592
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 41/81 (50%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
G +S Y+ IK LGK G A+ +++ + +V+ N ++S L R G + +L
Sbjct: 439 GSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEAL 498
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
++++ G PD +YN +
Sbjct: 499 STMRRMQEHGCIPDINSYNII 519
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 46/87 (52%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ + + +Y+ I+ LGK G +A + + E + + N +++ L + G+ +
Sbjct: 260 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLD 319
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTVYQS 88
++KLF +++ P VTYNT+ ++
Sbjct: 320 DAMKLFQEMETLRCIPSVVTYNTIIKA 346
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ + L + G +AL + + ++ N+IL+ L + G ++++
Sbjct: 478 VYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLS 537
Query: 69 KIKQSGLTPDAVTYNTV 85
+KQS + PD V+YNTV
Sbjct: 538 NMKQSTVRPDVVSYNTV 554
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 38/76 (50%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y S I LGK A E++ + + + + +++ L + G+ + ++ +FD+
Sbjct: 409 AAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDE 468
Query: 70 IKQSGLTPDAVTYNTV 85
+ + G PD YN +
Sbjct: 469 MNKLGCAPDVYAYNAL 484
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+HG I+SY+ + L K G +A+E+ +++ + + +V N +L L G
Sbjct: 1527 MQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGM 1586
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
FE + KL ++ G D +TY+++ ++
Sbjct: 1587 FEEASKLMKEMNTLGFEYDLITYSSILEA 1615
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 41/81 (50%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
G +S Y+ IK LGK G A+ +++ + +V+ N ++S L R G + +L
Sbjct: 1462 GSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEAL 1521
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
++++ G PD +YN +
Sbjct: 1522 STMRRMQEHGCIPDINSYNII 1542
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 46/87 (52%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ + + +Y+ I+ LGK G +A + + E + + N +++ L + G+ +
Sbjct: 1283 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLD 1342
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTVYQS 88
++KLF +++ P VTYNT+ ++
Sbjct: 1343 DAMKLFQEMETLRCIPSVVTYNTIIKA 1369
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ + L + G +AL + + ++ N+IL+ L + G ++++
Sbjct: 1501 VYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLS 1560
Query: 69 KIKQSGLTPDAVTYNTV 85
+KQS + PD V+YNTV
Sbjct: 1561 NMKQSTVRPDVVSYNTV 1577
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 38/76 (50%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y S I LGK A E++ + + + + +++ L + G+ + ++ +FD+
Sbjct: 1432 AAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDE 1491
Query: 70 IKQSGLTPDAVTYNTV 85
+ + G PD YN +
Sbjct: 1492 MNKLGCAPDVYAYNAL 1507
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ IK K GN K LE+Y + + + CN++++ L + GK +++ +
Sbjct: 567 TYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDA 626
Query: 71 KQSGLTPDAVTYNTV 85
G PD VTYN+V
Sbjct: 627 INRGFVPDIVTYNSV 641
Score = 34.3 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 42/83 (50%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y+S I L K +A +++++ + N N ++ L+R G F+ +L
Sbjct: 492 KPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALT 551
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
L + + G T D +TYN + ++
Sbjct: 552 LVNDMLFRGCTLDKITYNGLIKA 574
>gi|384251704|gb|EIE25181.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 905
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 44/81 (54%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +YSS I K G ALE++N + E N N +++ + ++E + ++F
Sbjct: 384 SVITYSSLISACEKAGQWELALELFNEMAGEGCIPNTVTYNSLITACAQGAQWEKASEVF 443
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
+++++ G TPD VT+ + S
Sbjct: 444 EQMQKGGCTPDVVTFTALISS 464
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 45/76 (59%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y++ I GK G K +E++ + + + +V + ++S + G++E +L+LF++
Sbjct: 351 TTYNALISAYGKAGQLDKVMEVFQEMVHKGCERSVITYSSLISACEKAGQWELALELFNE 410
Query: 70 IKQSGLTPDAVTYNTV 85
+ G P+ VTYN++
Sbjct: 411 MAGEGCIPNTVTYNSL 426
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y++ + K GN AL+ YN + + NV N ++ + G +E +K+
Sbjct: 244 NVHTYTALMNVCIKCGNCPLALDTYNHMRQDGACPNVVTYNTLIDVYGKMGLWEQGIKVL 303
Query: 68 DKIKQSGLTPDAVTYNTV 85
+K G+ P TYNT+
Sbjct: 304 TLMKTEGVEPVLRTYNTL 321
>gi|359487102|ref|XP_002274044.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Vitis vinifera]
Length = 390
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 46/78 (58%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ SYS Y+ K+G +A+++Y + + +++V N ++ + + + S+++F
Sbjct: 171 SLYSYSIYMDIQCKSGKPWRAVKLYKEMKKKGIRLDVVAYNTVIRAIGLSEGVDFSIRVF 230
Query: 68 DKIKQSGLTPDAVTYNTV 85
++K+ G P+ VTYNT+
Sbjct: 231 REMKEVGCEPNVVTYNTI 248
Score = 41.2 bits (95), Expect = 0.076, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G + + +Y++ I+ +G + ++ ++ + + + NV N I+ L NG+
Sbjct: 198 MKKKGIRLDVVAYNTVIRAIGLSEGVDFSIRVFREMKEVGCEPNVVTYNTIIKLLCENGR 257
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVY 86
+ +FD++++ G P+ +TY+ +
Sbjct: 258 IREAYGVFDQMREKGYAPNVITYHCFF 284
Score = 34.3 bits (77), Expect = 9.9, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y++ IK L +NG +A +++ + ++ NV + C+ + + L+ F
Sbjct: 241 NVVTYNTIIKLLCENGRIREAYGVFDQMREKGYAPNVITYHCFFGCIEKPKQI---LRTF 297
Query: 68 DKIKQSGLTPDAVTY 82
D++ SG+ P TY
Sbjct: 298 DRMINSGVRPRMDTY 312
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 23 GNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTY 82
G+ +A E++ + K N+ I I+ LV+ G+FE ++K+ +K GL+PD Y
Sbjct: 456 GDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCY 515
Query: 83 NTV 85
NTV
Sbjct: 516 NTV 518
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 44/77 (57%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ ++S I L KNG +A+ +++ + D+ +VF ++S L + G +++ +L D
Sbjct: 617 VQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHD 676
Query: 69 KIKQSGLTPDAVTYNTV 85
+ + G+ P+ VTYN +
Sbjct: 677 DMCKKGINPNIVTYNAL 693
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+S I L K G+ A E+++ + + N+ N +++ L + G+ + +LFD
Sbjct: 652 VFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFD 711
Query: 69 KIKQSGLTPDAVTYNTV 85
I + GL ++VTY+T+
Sbjct: 712 GIPEKGLARNSVTYSTI 728
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 37/65 (56%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
K+GN+ KA + + D+ +V ++++ L +NGK + ++ +F ++ GL PD
Sbjct: 594 KDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVF 653
Query: 81 TYNTV 85
TY ++
Sbjct: 654 TYTSL 658
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K I +Y+ I+ K N KA E+ I E+ N ++C I++ L G + +
Sbjct: 404 KPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANE 463
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
LF ++ GL P+ V Y T+ +
Sbjct: 464 LFQEMISWGLKPNIVIYTTIVKG 486
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 37/79 (46%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K +I Y++ +K L K G +A++I + D+ +VF N ++ + GK E
Sbjct: 474 KPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKS 533
Query: 66 LFDKIKQSGLTPDAVTYNT 84
++ GL P+ TY
Sbjct: 534 YLVEMIAKGLKPNVYTYGA 552
>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera]
gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 43/74 (58%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
S+ ++ + G S++ALE+ + + + N I N ++S R G+ E + +L +++
Sbjct: 188 SFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERM 247
Query: 71 KQSGLTPDAVTYNT 84
++ GL PD VT+N+
Sbjct: 248 REDGLFPDVVTFNS 261
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHGK-TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+++G + SY+ ++ L +NG L+A + D+ + N++ N ++ L +NG
Sbjct: 321 MKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGL 380
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + + SG+ PD VTY+T+
Sbjct: 381 ISDARMIMGLMISSGIGPDTVTYSTL 406
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDK---VNVFICNLILSCLVR 56
M++ G S+ +Y+S I LG + EIY + D +K N+ N ++SCL
Sbjct: 589 MEKRGCNKSLQTYNSLILGLGSKN---QIFEIYGLLDDMKEKGITPNICTYNNMISCLCE 645
Query: 57 NGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
G+ + + L D++ Q G++P+ ++ + ++
Sbjct: 646 GGRIKDATSLLDEMLQKGISPNISSFRLLIKA 677
>gi|146182801|ref|XP_001025271.2| hypothetical protein TTHERM_00837970 [Tetrahymena thermophila]
gi|146143712|gb|EAS05026.2| hypothetical protein TTHERM_00837970 [Tetrahymena thermophila
SB210]
Length = 1080
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSIT-DESDKVNVFICNLILSCLVRNGKF 60
+++ + + +YS+YIK L K G+ +ALEI+ + E K++ N IL L + F
Sbjct: 557 EENKRADLITYSTYIKGLFKQGDIEEALEIFEDLRKQEQYKLDEIFYNSILDGLFKARSF 616
Query: 61 ESSLKLFDKIKQSGLTPDAVTY 82
E + L+ K++Q + P VTY
Sbjct: 617 EKTQLLYQKMRQDNIQPSNVTY 638
>gi|115482212|ref|NP_001064699.1| Os10g0442700 [Oryza sativa Japonica Group]
gi|31432332|gb|AAP53975.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113639308|dbj|BAF26613.1| Os10g0442700 [Oryza sativa Japonica Group]
gi|215694632|dbj|BAG89823.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768315|dbj|BAH00544.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 493
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
+++HG +I +S + K G ++ALE++ ++ E+ +V I N ++ L +G
Sbjct: 226 LEEHGFPLNIRLATSLVDMYAKCGAIVEALEVFQAVPVEN--TDVLIWNAVIGGLAVHGM 283
Query: 60 FESSLKLFDKIKQSGLTPDAVTY 82
SL++F K++ +G+ PD +TY
Sbjct: 284 SRESLQMFQKMEHAGVVPDEITY 306
>gi|125574942|gb|EAZ16226.1| hypothetical protein OsJ_31678 [Oryza sativa Japonica Group]
Length = 387
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
+++HG +I +S + K G ++ALE++ ++ E+ +V I N ++ L +G
Sbjct: 120 LEEHGFPLNIRLATSLVDMYAKCGAIVEALEVFQAVPVEN--TDVLIWNAVIGGLAVHGM 177
Query: 60 FESSLKLFDKIKQSGLTPDAVTY 82
SL++F K++ +G+ PD +TY
Sbjct: 178 SRESLQMFQKMEHAGVVPDEITY 200
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 45/83 (54%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + +Y + I L K GN+ A+ + S+ ++ + NVF N I+ L ++ + +
Sbjct: 163 RPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFN 222
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
LF ++ G++PD TYN++ +
Sbjct: 223 LFSEMVTKGISPDIFTYNSLIHA 245
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 39/76 (51%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y + +L KN +A+ + +I + ++ + N+ + + R G+ E++ LF
Sbjct: 410 NLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLF 469
Query: 68 DKIKQSGLTPDAVTYN 83
+ GL PD TY+
Sbjct: 470 SNLSSKGLQPDVWTYS 485
>gi|255660976|gb|ACU25657.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 376
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ G +YS+ I L K N +A+ + N + K NV + N +++ LV KFE
Sbjct: 122 QKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFE 181
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
++++F ++ +P +TYNT+
Sbjct: 182 DAIRVFREMGTMHCSPTIITYNTL 205
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 44/81 (54%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+ +YS ++ L + +AL+++N +T + K +V + N+++ L GK + +L L+
Sbjct: 233 GVITYSMLMEGLCLDHKVARALQLWNQVTSKGFKPDVQMHNILIRGLCSVGKMQLALSLY 292
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
+ P+ V++NT+ +
Sbjct: 293 FDMNLWKCAPNLVSHNTLMEG 313
>gi|357168491|ref|XP_003581673.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Brachypodium distachyon]
Length = 392
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 44/87 (50%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
+Q ++ +YS+ + FL ++G KA E++ + E + + N+++S L R GK
Sbjct: 205 KQECLPNVVTYSTLMHFLCQHGRVDKAFELFERMRKEEIDADTVVYNILISGLCREGKVT 264
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+ +F + G P++ TY + S
Sbjct: 265 IAFDMFKSMSSEGCYPNSGTYQVLLDS 291
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 20 GKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDA 79
GK N+L+ L + E ++ ICN + LV+ GK E +LK ++++ +G+ PD
Sbjct: 249 GKLRNALRVLTLMQKAGVEP---SLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDI 305
Query: 80 VTYNTV 85
VTYN++
Sbjct: 306 VTYNSL 311
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 44/77 (57%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y++ + L K+G A+EI N + + + N ++ L + GK + ++KL D
Sbjct: 422 IVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLD 481
Query: 69 KIKQSGLTPDAVTYNTV 85
++K GL PD +TY+T+
Sbjct: 482 EMKGKGLKPDIITYSTL 498
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I + +S I+ L K G + KA + + D +V N+++S + G+ S+L+L D
Sbjct: 145 IIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLD 204
Query: 69 KIKQSGLTPDAVTYNTVYQS 88
++ ++PD VTYNT+ ++
Sbjct: 205 RMS---VSPDVVTYNTILRT 221
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M QHG T S SY+ + L K+ +A+E + + ++ N +L+ L ++GK
Sbjct: 378 MPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGK 437
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++++ +++ G +P +TYNTV
Sbjct: 438 VDVAVEILNQLGSKGCSPVLITYNTV 463
Score = 42.4 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 44/75 (58%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I L K G + A+++ + + + K ++ + ++ L R GK + ++ F +
Sbjct: 459 TYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDL 518
Query: 71 KQSGLTPDAVTYNTV 85
++ G+ P+A+TYN++
Sbjct: 519 EEMGVKPNAITYNSI 533
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +++ I FL + G +A+++ + N N +L L ++ K E +++
Sbjct: 351 SVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYL 410
Query: 68 DKIKQSGLTPDAVTYNTV 85
D + G PD VTYNT+
Sbjct: 411 DIMVSRGCYPDIVTYNTL 428
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 38/77 (49%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ ++ L +G +A+E+ + +V +++ + ++KL D
Sbjct: 212 VVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLD 271
Query: 69 KIKQSGLTPDAVTYNTV 85
+++ G PD VTYN +
Sbjct: 272 EMRDKGCKPDVVTYNVL 288
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 37/73 (50%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
+++++ L +NG + + + D ++ C ++ L + GK + ++ + ++
Sbjct: 114 NNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILED 173
Query: 73 SGLTPDAVTYNTV 85
SG PD +TYN +
Sbjct: 174 SGAVPDVITYNVL 186
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 38/80 (47%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y+ I + K G +A+ N + + NV N+IL + G++ + K
Sbjct: 279 KPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEK 338
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
++ + G +P VT+N +
Sbjct: 339 FLAEMIRKGCSPSVVTFNIL 358
>gi|413951894|gb|AFW84543.1| hypothetical protein ZEAMMB73_135692 [Zea mays]
Length = 575
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I L K GN +A ++ ++ +++ N+++ L R GK + L +
Sbjct: 263 TYNSIISALCKAGNMTEAFKLEQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDNLLLDM 322
Query: 71 KQSGLTPDAVTYNTV 85
+GLTPD VTYNT+
Sbjct: 323 CSNGLTPDTVTYNTI 337
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 37/80 (46%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+T ++S+YI + +A + + +T N N I+S L + G + K
Sbjct: 223 QTDFIAFSAYINGRSRLDYVNEAYQAFAEMTSRGIVPNNITYNSIISALCKAGNMTEAFK 282
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L ++QSGL PD T N +
Sbjct: 283 LEQNMRQSGLVPDIYTSNIL 302
>gi|413926925|gb|AFW66857.1| hypothetical protein ZEAMMB73_570381 [Zea mays]
Length = 487
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I L K GN +A ++ ++ +++ N+++ L R GK + L +
Sbjct: 263 TYNSIISALCKAGNMTEAFKLEQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDNLLLDM 322
Query: 71 KQSGLTPDAVTYNTV 85
+GLTPD VTYNT+
Sbjct: 323 CSNGLTPDTVTYNTI 337
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 37/80 (46%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+T ++S+YI + +A + + +T N N I+S L + G + K
Sbjct: 223 QTDFIAFSAYINGRSRLDYVNEAYQAFAEMTSRGIVPNNITYNSIISALCKAGNMTEAFK 282
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L ++QSGL PD T N +
Sbjct: 283 LEQNMRQSGLVPDIYTSNIL 302
>gi|297793123|ref|XP_002864446.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310281|gb|EFH40705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 531
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++S ++ I K+GN KALE++ S+ + NV I++ L +G +L +F
Sbjct: 284 AVSLNNAVIDMYAKSGNITKALEVFESVNER----NVVTWTTIITGLATHGHGAEALVMF 339
Query: 68 DKIKQSGLTPDAVTYNTVYQS-DHITWI 94
D++ ++G+ P+ VT+ + + H+ W+
Sbjct: 340 DRMVKAGVKPNDVTFIAILSACSHVGWV 367
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I GK G + + + S + +V N +++C + GK L+ F ++
Sbjct: 170 TYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREM 229
Query: 71 KQSGLTPDAVTYNTV 85
KQSGL P+ V+Y+T+
Sbjct: 230 KQSGLKPNVVSYSTL 244
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 32 YNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + K VF N+++ C+ + G E++ LF+++K GL PD VTYN++
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSM 174
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 48/83 (57%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ +I +Y+ + L KNG A +Y + + ++V + N++++ L + G F+ +L
Sbjct: 446 QPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALS 505
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
L K++ +G PDAVTY T+ ++
Sbjct: 506 LVSKMEDNGCIPDAVTYETLVRA 528
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I L K G A ++ N + + +V + +L L +N + + ++ L KI
Sbjct: 381 TYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKI 440
Query: 71 KQSGLTPDAVTY 82
K G+ P+ TY
Sbjct: 441 KDQGIQPNIYTY 452
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 46/77 (59%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y++ + L K+G + A+EI N ++ + + N ++ L + GK E + +L +
Sbjct: 419 IVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLE 478
Query: 69 KIKQSGLTPDAVTYNTV 85
++++ GL PD +TY+T+
Sbjct: 479 EMRRKGLKPDIITYSTL 495
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 4 HGKTSISSYSS--YIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
+G S ++S +++ L +NG + L+ + + D +V C ++ R+GK
Sbjct: 100 NGSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTR 159
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++ + ++ SG PD +TYN +
Sbjct: 160 KATRIMEILENSGAVPDVITYNVL 183
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I L K G + A E+ + + K ++ + +L L GK + ++K+F +
Sbjct: 456 TYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDM 515
Query: 71 KQSGLTPDAVTYNTV 85
+ + P AVTYN +
Sbjct: 516 EGLSIKPSAVTYNAI 530
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 39/77 (50%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ ++ L +G +A+E+ + +V +++ + ++KL D
Sbjct: 209 VVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLD 268
Query: 69 KIKQSGLTPDAVTYNTV 85
++++ G PD VTYN +
Sbjct: 269 EMRKKGCKPDVVTYNVL 285
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M +HG S SY+ + + +A+E + ++ N +L+ L ++GK
Sbjct: 375 MPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGK 434
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
++++++ +++ G +P +TYNTV
Sbjct: 435 ADAAVEILNQLSSKGCSPVLITYNTV 460
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G K + +Y+ I + K G +A++ N++ + NV N+IL + G+
Sbjct: 270 MRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGR 329
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + +L + + G +P VT+N +
Sbjct: 330 WMDAERLLADMLRKGCSPSVVTFNIL 355
Score = 34.7 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+ I K+G KAL++ ++ D V N IL L +GK + ++++ D
Sbjct: 177 VITYNVLIGGYCKSGEIDKALQVLERMSVAPDVVTY---NTILRSLCDSGKLKEAMEVLD 233
Query: 69 KIKQSGLTPDAVTYNTVYQS 88
+ Q PD +TY + ++
Sbjct: 234 RQMQRECYPDVITYTILIEA 253
>gi|357465315|ref|XP_003602939.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491987|gb|AES73190.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K +Y+S I F +NG +A+E+ + + + + N+IL L R G+F+ +L
Sbjct: 412 KPDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQADTVTFNVILGGLCREGRFDEALD 471
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
+ +K+ Q G+ + +Y V S
Sbjct: 472 MIEKLPQQGVYLNKGSYRIVLNS 494
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I + G + +A + + + NVF + ++ L + GK + + + ++
Sbjct: 347 TYNVLINGFCREGKADRARNVIEFMKNNGCCPNVFNYSALVDGLCKAGKLQDAKGVLAEM 406
Query: 71 KQSGLTPDAVTYNTV 85
K SGL PDA+TY ++
Sbjct: 407 KSSGLKPDAITYTSL 421
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/82 (21%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDES-DKVNVFICNLILSCLVRNGKFESSL 64
K ++ ++ +K+ + G+ A E+ + + NV + ++ L RNG+ + +
Sbjct: 270 KPNVCIFNILVKYHCRRGDIDSAFEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEAF 329
Query: 65 KLFDK-IKQSGLTPDAVTYNTV 85
+LF++ + + + PD +TYN +
Sbjct: 330 ELFEEMVSKDQIVPDPLTYNVL 351
>gi|357463937|ref|XP_003602250.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491298|gb|AES72501.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 946
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
YSS I K + +KAL++Y + + K N I + IL C G+ + F ++K
Sbjct: 338 YSSLICGYCKTHDLVKALDLYEDMILKGIKTNCVIVSCILHCFAEMGEDSRVVDTFKEVK 397
Query: 72 QSGLTPDAVTYNTVYQS 88
QSG+ D V YN V+ S
Sbjct: 398 QSGVFLDGVAYNIVFDS 414
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
N+F CN +++ LV+ + + ++FD+IK GL P+ TY + ++
Sbjct: 193 NIFACNFLINRLVKCDQVNMAFEIFDRIKSLGLCPNHHTYAIIIKA 238
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 32/56 (57%)
Query: 31 IYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVY 86
I+ + D +V I +++ ++ FE +++LF+++ + GL PD VTY ++
Sbjct: 692 IWRDMKDREVSPDVVIYTVLIDGHIKVDNFEDAIRLFNEVMKRGLEPDNVTYTALF 747
>gi|449442096|ref|XP_004138818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Cucumis sativus]
gi|449490234|ref|XP_004158545.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Cucumis sativus]
Length = 823
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 42/83 (50%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K +Y+S I G KA EIY S+ ++ L++ CL ++G+ ++++K
Sbjct: 262 KVDTQTYNSLITLFLNKGLPYKAFEIYESMAGAECSLDASTFELMIPCLAKSGRLDAAMK 321
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
LF ++K+ P Y+++ S
Sbjct: 322 LFQEMKEKKYRPAQNVYSSLVDS 344
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
YSS + +GK G +++IY + + + + ++ V+ GK +++LKL+D +K
Sbjct: 338 YSSLVDSMGKAGRLDTSMKIYMEMQLLELRPSALMFVSLIESHVKAGKLDTALKLWDDMK 397
Query: 72 QSGLTPDAVTYNTVYQS 88
++G P+ Y+ V +S
Sbjct: 398 RAGFKPNFGLYSMVVES 414
>gi|326527525|dbj|BAK08037.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 460
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 43/75 (57%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I + G +++AL++++ + + + N ++ CL R+G E + ++F +
Sbjct: 82 TYNSLIAGAARRGLTMRALDLFDEMLQAGVAPDAWSYNALMHCLFRSGHPEDAYRVFADM 141
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ P A TYNT+
Sbjct: 142 AEKGVAPCATTYNTL 156
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 34/77 (44%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y++ I L K+G A + + NV ++ C + G+F+ L+ F
Sbjct: 185 IVTYNTMINGLCKSGKVGYARMVLRELGRTEHAPNVVTYTTVMKCCFKYGRFDQGLETFL 244
Query: 69 KIKQSGLTPDAVTYNTV 85
+ + G PD Y TV
Sbjct: 245 SLLEGGYIPDLFPYCTV 261
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 46/83 (55%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K I +Y+ + L +N +A +++ S+ + ++++F N+++ L++ G+ E ++
Sbjct: 584 KCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMD 643
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
LF I GL PD TY + ++
Sbjct: 644 LFATISAYGLVPDVETYRLIAEN 666
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 36/66 (54%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVY 86
KA +++ + D+ ++N N+++ L R G+ + +L D + + + PD ++YNT+
Sbjct: 430 KAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLV 489
Query: 87 QSDHIT 92
+T
Sbjct: 490 DGHCLT 495
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ++G K ++ SY S + KNG +A+ I + + + N + N I+ V +G
Sbjct: 471 MQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGP 530
Query: 60 FESSLKLFDKIKQSGLTPDAVTYN 83
+ + L +K+K +G++P VTYN
Sbjct: 531 NDQAFILVEKMKSNGISPSIVTYN 554
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY+ I + + G A+E+++ +T+ + N N ++ ++ G E+ +L D++
Sbjct: 202 SYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQM 261
Query: 71 KQSGLTPDAVTYNTV 85
GL P+A+TYN +
Sbjct: 262 VCHGLKPNAITYNVL 276
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS L +NG+S L ++ + + C+++L+ L ++GK + ++ +
Sbjct: 307 TYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSL 366
Query: 71 KQSGLTPDAVTYNTV 85
+GL P V YNT+
Sbjct: 367 VNAGLVPTRVIYNTL 381
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ +G ++ ++++ I G+ G K + + + + K NV I++ +NGK
Sbjct: 436 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 495
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
++ + D + + P+A YN +
Sbjct: 496 IPEAVAILDDMFHKDVLPNAQVYNAI 521
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+Q+G ++++Y+ + L + +AL+I I + K N+ N ILS G
Sbjct: 479 MRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGM 538
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
F+ +L++ K+ G PD++TYNTV
Sbjct: 539 FKGALQIAGKLLVGGTKPDSITYNTV 564
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 36/58 (62%)
Query: 31 IYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
IYN++ + ++NV+ N++L L +N + +++ KL ++ G PDAV+Y TV S
Sbjct: 165 IYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSS 222
Score = 41.6 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 37/75 (49%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++YS+ I K G+ + A EI+N + NV + ++ L RN F +L L +
Sbjct: 384 TTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIEN 443
Query: 70 IKQSGLTPDAVTYNT 84
+ P+ +T+NT
Sbjct: 444 MANGNCPPNTITFNT 458
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 43/78 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +++S +K G +AL+++N + E + N N ++ L GK ++ +
Sbjct: 312 NVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVS 371
Query: 68 DKIKQSGLTPDAVTYNTV 85
K++++G+ P+ TY+T+
Sbjct: 372 QKMERNGVFPNETTYSTL 389
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 37/74 (50%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ + L +N AL + ++ + + N N + L +GK E ++K+ ++++
Sbjct: 421 YTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMR 480
Query: 72 QSGLTPDAVTYNTV 85
Q G P+ TYN V
Sbjct: 481 QYGCAPNVTTYNEV 494
Score = 34.3 bits (77), Expect = 8.5, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ + + + G +A E+ I K V + N +++ R K E +LF+++
Sbjct: 215 SYTTVVSSMCRLGKVEEARELSMRI-----KSFVPVYNALINGFCREHKMEEVFELFNEM 269
Query: 71 KQSGLTPDAVTYNTVYQS 88
G+ PD +TY+TV +
Sbjct: 270 AVEGIDPDVITYSTVINT 287
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 1 MQQHGK-TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+HG ++ +Y+ + L K+G + A ++++ + + N+ N ++ L R K
Sbjct: 259 MQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++ D++K G+ P+ +TYNT+
Sbjct: 319 ANEANEVMDQMKSDGINPNLITYNTL 344
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 45/75 (60%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I L KNG + E+Y + + N+ N +++ L ++G+ + + K+FD++
Sbjct: 235 TYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEM 294
Query: 71 KQSGLTPDAVTYNTV 85
++ G++ + VTYNT+
Sbjct: 295 RERGVSCNIVTYNTL 309
>gi|413951888|gb|AFW84537.1| hypothetical protein ZEAMMB73_783984 [Zea mays]
Length = 238
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M + G K I +Y S I+ L + AL I+N I D +V+V + N+++ L GK
Sbjct: 71 MLERGFKPDIRTYGSLIRGLCRVKKIDAALCIWNEILDAGIQVDVIVHNILIHGLCSAGK 130
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++ ++K+ +P+ VTYNT+
Sbjct: 131 VNDAFCIYLEMKEKNCSPNLVTYNTL 156
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M G T + +Y++ + L K S + +EI+ ++T++ N+ N I+ L + K
Sbjct: 566 MWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKK 625
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
++ L ++K GLTPD V++ T+
Sbjct: 626 VNEAVDLLGEMKSKGLTPDVVSFGTL 651
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+++++ + L K G L++ +++ + N+F N+ + L + G + +++L
Sbjct: 295 VTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLG 354
Query: 69 KIKQSGLTPDAVTYNTV 85
+ + GL PD VTYNTV
Sbjct: 355 CVSREGLRPDVVTYNTV 371
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 42/80 (52%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ SI Y++ IK L + G L AL++ N + ++ K +++ NLI++ L + G +
Sbjct: 467 RPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANH 526
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L G PD TYNT+
Sbjct: 527 LIGDAITKGCIPDIFTYNTL 546
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 34/61 (55%)
Query: 28 ALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
A+E+ N + + +V N +L+ L + K E +++F + + G P+ +TYNT+ +
Sbjct: 559 AIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIE 618
Query: 88 S 88
S
Sbjct: 619 S 619
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 46/75 (61%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I L KNG + E+Y + + N++ N +++ L ++G+ + + K+FD++
Sbjct: 235 TYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEM 294
Query: 71 KQSGLTPDAVTYNTV 85
++ G++ + VTYNT+
Sbjct: 295 RERGVSCNIVTYNTL 309
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 MQQHGK-TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+HG ++ +Y+ + L K+G + A ++++ + + N+ N ++ L R K
Sbjct: 259 MQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ K+ D++K + P+ +TYNT+
Sbjct: 319 ANEANKVMDQMKSYVINPNLITYNTL 344
>gi|168066970|ref|XP_001785401.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662982|gb|EDQ49775.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 318
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G + ++ +YS I L + N AL++Y + + K NV ++ L R GK
Sbjct: 207 MKERGHRPNVYTYSMLIDLLSRTRNHAHALKMYKEMFKANSKPNVNTYTTLIHSLARTGK 266
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
++ +F + G+ P AVTY + Q+
Sbjct: 267 VNAANTMFMGLPSLGINPSAVTYTIMIQA 295
Score = 41.2 bits (95), Expect = 0.089, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+++I L K+ +AL ++ + D + + N+F N+++ L GK + + ++F ++
Sbjct: 82 YTTFIDALDKDTCHEEALAVFKEMRDSNWEPNIFTYNVLIHSLATAGKLDGAREMFGRLP 141
Query: 72 QSGLTPDAVTYNTVYQSDHI 91
+ P+ VTY T+ + H+
Sbjct: 142 EPHHRPNFVTY-TILVTAHV 160
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+S + L K +E Y ++ ++ N+F N++L L R K + +L L +
Sbjct: 496 VYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLE 555
Query: 69 KIKQSGLTPDAVTYNTV 85
++K + PDAVT+ T+
Sbjct: 556 EMKNKSVNPDAVTFGTL 572
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ +I+ L + G A+ + + ++ K +V N ++ L +N KF+ + K+
Sbjct: 253 TYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKM 312
Query: 71 KQSGLTPDAVTYNTV 85
GL PD+ TYNT+
Sbjct: 313 VNEGLEPDSYTYNTL 327
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y +K G+ G +A+ ++ + + VF N I+S LV +G F+ + K++ +++
Sbjct: 79 YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMR 138
Query: 72 QSGLTPDAVTYNTVYQS 88
G+TPD ++ +S
Sbjct: 139 DRGITPDVYSFTIRMKS 155
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+S+++ ++ L K G+ + ++ + + N+F NL + L + G+ + ++++
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVG 275
Query: 69 KIKQSGLTPDAVTYNTV 85
+ + G PD +TYN +
Sbjct: 276 CLIEQGPKPDVITYNNL 292
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 33/61 (54%)
Query: 28 ALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
ALEI + + D +V+ N +L+ L + KFE ++ + + + G P+ T+N + +
Sbjct: 480 ALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLE 539
Query: 88 S 88
S
Sbjct: 540 S 540
>gi|242038361|ref|XP_002466575.1| hypothetical protein SORBIDRAFT_01g010260 [Sorghum bicolor]
gi|241920429|gb|EER93573.1| hypothetical protein SORBIDRAFT_01g010260 [Sorghum bicolor]
Length = 771
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 49/77 (63%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+++Y+ I+ LG+ G + A I + ++ + +++ + N +++ L + GK E + LF+
Sbjct: 645 VATYNLIIQGLGQMGKAEVASTIIDRLSKKGVYMDIVMYNTLINQLGKVGKVEEAGCLFE 704
Query: 69 KIKQSGLTPDAVTYNTV 85
+I +SG+ PD VT+NT+
Sbjct: 705 QIIRSGMKPDVVTFNTL 721
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFIC--NLILSCLVRNGKFESSL 64
+++ Y+ I GK +L ++ ++ + V+ IC N ++ LV + +L
Sbjct: 223 SNVRLYNICIHAFGKWRQLGMSLRLFAAMKAATPPVSPDICTYNSVIRALVVGARVPDAL 282
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
+FD++K SG+ PD TY V
Sbjct: 283 VIFDEMKSSGIEPDVFTYRAV 303
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G + S+ +++ I+ + G AL + + + ++ + N+ + C + GK
Sbjct: 224 MQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGK 283
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + K F +IK GL PD VTY ++
Sbjct: 284 VDMAWKFFHEIKSHGLLPDDVTYTSM 309
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 41/78 (52%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + S+Y++ I L S L +++ + + +V+V + ++ R G+ +++L
Sbjct: 195 RPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALS 254
Query: 66 LFDKIKQSGLTPDAVTYN 83
L D++K + L D V YN
Sbjct: 255 LLDEMKSNCLHADIVLYN 272
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 41/82 (50%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
M++ ++S+Y+ I L K G A ++ +++ + NV N+++ L + K
Sbjct: 399 MKKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKL 458
Query: 61 ESSLKLFDKIKQSGLTPDAVTY 82
+ + +F+ + +PD VT+
Sbjct: 459 DEACSIFEGMNHKICSPDEVTF 480
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 39/77 (50%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ SYS I L K G + + E++ ++ ++ ++ N + ++GK + +L +
Sbjct: 582 VMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLE 641
Query: 69 KIKQSGLTPDAVTYNTV 85
++K G P VTY +V
Sbjct: 642 EMKTKGRQPTVVTYGSV 658
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 35/74 (47%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+S IK K G +I+ + ++ + N + C+ + G+ LF++IK
Sbjct: 515 YTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIK 574
Query: 72 QSGLTPDAVTYNTV 85
G PD ++Y+ +
Sbjct: 575 SRGFIPDVMSYSIL 588
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 35/74 (47%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
YSS I GK G +A I + + NV+ N +L LV+ + +L F +K
Sbjct: 690 YSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMK 749
Query: 72 QSGLTPDAVTYNTV 85
TP+ +TY+ +
Sbjct: 750 NLKGTPNHITYSIL 763
>gi|255660958|gb|ACU25648.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 348
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 45/84 (53%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ G +YS+ I L K N +AL + N + K NV + N +++ LV KFE
Sbjct: 122 QKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNTLINGLVGASKFE 181
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
++++F ++ +P +TYNT+
Sbjct: 182 DAIRVFREMGTMHCSPTIITYNTL 205
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 45/79 (56%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +YS +K L + +AL+++N +T + K +V + N+++ L GK + +L L+
Sbjct: 234 VITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYF 293
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
+ + P+ V++NT+ +
Sbjct: 294 DMNRWKCAPNLVSHNTLME 312
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 46/77 (59%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y++ + L K+G A+EI N ++ + + N ++ L + GK E ++KL D
Sbjct: 426 IVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLD 485
Query: 69 KIKQSGLTPDAVTYNTV 85
++++ GL PD +TY+++
Sbjct: 486 EMRRKGLKPDIITYSSL 502
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 46/75 (61%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I L K G + +A+++ + + + K ++ + ++S L R GK + ++K F +
Sbjct: 463 TYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL 522
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ P+A+TYN++
Sbjct: 523 EGLGIRPNAITYNSI 537
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M HG T S SY+ + K +A+E + + ++ N +L+ L ++GK
Sbjct: 382 MPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGK 441
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++++ +++ G +P +TYNTV
Sbjct: 442 VDVAVEILNQLSSKGCSPVLITYNTV 467
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G K + +Y+ I + K G +A++ N++ + NV N+IL + G+
Sbjct: 277 MRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGR 336
Query: 60 FESSLKLFDKIKQSGLTPDAVTYN 83
+ + KL + + G +P VT+N
Sbjct: 337 WMDAEKLLSDMLRKGCSPSVVTFN 360
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 36/72 (50%)
Query: 14 SYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQS 73
++++ L +NG + S+ D ++ C ++ R GK + + + + ++QS
Sbjct: 119 NHLRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQS 178
Query: 74 GLTPDAVTYNTV 85
G PD +TYN +
Sbjct: 179 GAVPDVITYNVL 190
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/77 (20%), Positives = 39/77 (50%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ ++ L +G +A+E+ + + +V +++ + ++KL D
Sbjct: 216 VVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLD 275
Query: 69 KIKQSGLTPDAVTYNTV 85
+++ G PD VTYN +
Sbjct: 276 EMRNKGSKPDVVTYNVL 292
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +YS + L NG KALE+++ + K++++I ++ + + GK + LF
Sbjct: 394 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 453
Query: 69 KIKQSGLTPDAVTYNTV 85
+ G+ P+ VTYNT+
Sbjct: 454 SLSLKGVKPNVVTYNTM 470
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G + ++ +YSS I L G A ++ + + ++ N+ N ++ V+ GK
Sbjct: 210 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 269
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
F + KL D + + + PD TYN++
Sbjct: 270 FVEAEKLHDDMIKRSIDPDIFTYNSL 295
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 43/83 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K I Y++ I+ + K G +++ S++ + K NV N ++S L + +
Sbjct: 426 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 485
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
L K+K+ G PD+ TYNT+ ++
Sbjct: 486 LLKKMKEDGPLPDSGTYNTLIRA 508
Score = 38.1 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 43/77 (55%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I+ L +G+ A +++ + + ++ +++L L NGK E +L++FD +
Sbjct: 361 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 420
Query: 71 KQSGLTPDAVTYNTVYQ 87
++S + D Y T+ +
Sbjct: 421 QKSEIKLDIYIYTTMIE 437
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 40/70 (57%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGL 75
++ LG+ ++ S+ +E ++V+ ++S L RN KF+ +L F+++K++G
Sbjct: 89 LRILGRESQLTTVSRLFKSLREEGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGP 148
Query: 76 TPDAVTYNTV 85
P VTYN +
Sbjct: 149 QPSLVTYNVI 158
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+S + + G +A+EIYN + + N F N ++ +N F + +F+
Sbjct: 293 VFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFE 352
Query: 69 KIKQSGLTPDAVTYNTV 85
++ G+ PD VT+N++
Sbjct: 353 DMQACGVEPDIVTWNSL 369
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 45/78 (57%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I +Y+ + G+ G A E+ +S+ + + +VF +LS R GK E +++++
Sbjct: 257 NIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIY 316
Query: 68 DKIKQSGLTPDAVTYNTV 85
++++ S TP++ T+N +
Sbjct: 317 NQMRTSNCTPNSFTFNAL 334
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK-FESSLKLF 67
+ +Y+S I L +N +AL + + + + ++ N+I+ + G+ +E+ L+LF
Sbjct: 117 VYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILELF 176
Query: 68 DKIKQSGLTPDAVTYNT 84
+++K G+ PD TYNT
Sbjct: 177 EEMKAQGIQPDEYTYNT 193
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ G + I +++S + GKNG + L+++ + + + N+++ R G
Sbjct: 354 MQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGS 413
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +L ++D + Q+G TPD T+NT+
Sbjct: 414 SDQALSIYDGMLQAGCTPDLATFNTL 439
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 36/75 (48%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ I K+G A I++ + + + F N + C V G F +L + +
Sbjct: 610 SYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHM 669
Query: 71 KQSGLTPDAVTYNTV 85
++G PD VTY T+
Sbjct: 670 HKTGCKPDEVTYRTL 684
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 41/78 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
++++ I GKN N + + I+ + + ++ N +L +NG + LK+F +
Sbjct: 330 TFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGM 389
Query: 71 KQSGLTPDAVTYNTVYQS 88
K++G PD T+N + ++
Sbjct: 390 KKAGFEPDKATFNILIEA 407
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLK-ALEIYNSITDESDKVNVFICNLILSCLVRNG 58
M++ G + S+ +Y+ I GK G S + LE++ + + + + + N ++
Sbjct: 143 MKEAGPQPSLVTYNVIIDLYGKKGRSWENILELFEEMKAQGIQPDEYTYNTAITACASGS 202
Query: 59 KFESSLKLFDKIKQSGLTPDAVTYNTV 85
E + +LF ++K S TPD VTYN +
Sbjct: 203 LCEEATELFTQMKSSNCTPDRVTYNAL 229
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 44/79 (55%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++++ I+ G+ G+S +AL IY+ + ++ N +L+ L R G++E + + D+
Sbjct: 399 ATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDE 458
Query: 70 IKQSGLTPDAVTYNTVYQS 88
+ +S P+ + Y ++ +
Sbjct: 459 LNRSSYKPNDIAYASMLHA 477
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTS-ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ HG S S++++ I GK G KA + + + + +V N ++ R G
Sbjct: 529 MRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGM 588
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + +G TPD V+YNTV
Sbjct: 589 YRKCEATLRECMAAGQTPDLVSYNTV 614
>gi|15222150|ref|NP_172763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200670|sp|Q9SAD9.1|PPR40_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g13040, mitochondrial; Flags: Precursor
gi|4850387|gb|AAD31057.1|AC007357_6 F3F19.6 [Arabidopsis thaliana]
gi|332190841|gb|AEE28962.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
M+ G + SYS+ I+ + N+ KA ++ + + +NV ++ +R G
Sbjct: 317 MEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNS 376
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTVYQSDHI 91
+ KL D++ + GL+PD + Y T+ DH+
Sbjct: 377 SVAKKLLDQMTELGLSPDRIFYTTIL--DHL 405
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+Q G ++ +Y+S IK + GNS A ++ + +T+ + IL L ++G
Sbjct: 351 MRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGN 410
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + +F+ + + +TPDA++YN++
Sbjct: 411 VDKAYGVFNDMIEHEITPDAISYNSL 436
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 40/74 (54%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ + L K+GN KA ++N + + + N ++S L R+G+ ++KLF+ +K
Sbjct: 398 YTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMK 457
Query: 72 QSGLTPDAVTYNTV 85
PD +T+ +
Sbjct: 458 GKECCPDELTFKFI 471
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ++G K ++ SY S + KNG +A+ I + + + N + N I+ V +G
Sbjct: 467 MQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGP 526
Query: 60 FESSLKLFDKIKQSGLTPDAVTYN 83
+ + L +K+K +G++P VTYN
Sbjct: 527 NDQAFILVEKMKSNGISPSIVTYN 550
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY+ I + + G A+E+++ +T+ + N N ++ ++ G E+ L D++
Sbjct: 198 SYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQM 257
Query: 71 KQSGLTPDAVTYNTV 85
GL P+A+TYN +
Sbjct: 258 VCHGLKPNAITYNVL 272
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS L +NG+S L ++ + + C+++L+ L ++GK + ++ +
Sbjct: 303 TYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSL 362
Query: 71 KQSGLTPDAVTYNTV 85
+GL P V YNT+
Sbjct: 363 VNAGLVPTRVIYNTL 377
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ +G ++ ++++ I G+ G K + + + + K NV I++ +NGK
Sbjct: 432 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 491
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
++ + D + + P+A YN +
Sbjct: 492 IPEAVAILDDMFHKDVLPNAQVYNAI 517
>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
Length = 794
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 41/74 (55%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y+ + L K G + AL++++ + D NV I ++LS L GK + +++L
Sbjct: 208 ATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGS 267
Query: 70 IKQSGLTPDAVTYN 83
+K G PD VTYN
Sbjct: 268 MKDKGCLPDEVTYN 281
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 38/65 (58%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
++G LKA ++ SI D +V N +++ L + + +++LF +++ G++PD +
Sbjct: 512 QSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEI 571
Query: 81 TYNTV 85
TY T+
Sbjct: 572 TYGTL 576
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ +K L +G L AL +YN + N N+++ L + G +LK+FD++
Sbjct: 175 YNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEML 234
Query: 72 QSGLTPDAVTYNTVYQS 88
G+ P+ Y + S
Sbjct: 235 DRGIMPNVKIYTVLLSS 251
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 32 YNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQ--SD 89
Y ++ + + +V + +++ G+ E +L D +K+ G PD YNTV + D
Sbjct: 335 YKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCD 394
Query: 90 H 90
H
Sbjct: 395 H 395
>gi|297842741|ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335093|gb|EFH65511.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 780
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 42/80 (52%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ YSS I L + +A E+Y ++ + K ++ + +++ L + GK E +LKL
Sbjct: 303 LRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLR 362
Query: 69 KIKQSGLTPDAVTYNTVYQS 88
+ G+TPD YN V ++
Sbjct: 363 SMPSKGITPDTYCYNAVIKA 382
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 40/70 (57%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
++G+ LKA + D + ++ N++++ R G + +LKL + ++ GL+PD+V
Sbjct: 494 QSGSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQLKGLSPDSV 553
Query: 81 TYNTVYQSDH 90
TYNT+ H
Sbjct: 554 TYNTLINGLH 563
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 36/67 (53%)
Query: 19 LGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPD 78
L K G + A ++++ +T N +++S L + G E + KLF ++K SG PD
Sbjct: 208 LYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSPEDARKLFYEMKASGNYPD 267
Query: 79 AVTYNTV 85
+V +N +
Sbjct: 268 SVAHNAL 274
Score = 34.3 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 30/55 (54%)
Query: 28 ALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTY 82
A +YN + + N++ +++ L + G+ + K+FD + G++P+ VTY
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTY 236
>gi|255660966|gb|ACU25652.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 376
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ G +YS+ I L K N +AL + N + K NV + N +++ L KFE
Sbjct: 122 QKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFE 181
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
++++F ++ +P +TYNT+
Sbjct: 182 DAIRVFREMGTMHCSPTIITYNTL 205
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 44/81 (54%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+ +YS +K L + +AL+++N + + K +V + N+++ L GK + +L L+
Sbjct: 233 GVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKMQLALSLY 292
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
+ + P+ V++NT+ +
Sbjct: 293 FDMNRWKCAPNLVSHNTLMEG 313
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ I L + L+A E++ + N+ +++L CL + G + ++ LF +
Sbjct: 408 SYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAM 467
Query: 71 KQSGLTPDAVTYN 83
+ SGL PD VTYN
Sbjct: 468 ENSGLKPDLVTYN 480
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ ++S+ I G +A+E+++ + K NV ++I+ L R GK +KL
Sbjct: 160 NVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLL 219
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ +K G PD V YNT+
Sbjct: 220 EHMKVVGCEPDVVIYNTI 237
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 43/80 (53%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ SYS IK L + G + + +++ + + +V I N I+ L ++ ++
Sbjct: 193 KPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVH 252
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F K+K +G+ P VTY ++
Sbjct: 253 IFCKMKGTGILPTVVTYTSL 272
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 36/60 (60%)
Query: 26 LKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
++A +++ + + +VF +++++ + + + + +LFD++ GL PD V+YNT+
Sbjct: 353 VEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTL 412
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 45/83 (54%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + +Y + I L K GN+ A+ + S+ ++ + NVF N I+ L ++ + +
Sbjct: 163 RPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFN 222
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
LF ++ G++PD TYN++ +
Sbjct: 223 LFSEMVTKGISPDIFTYNSLIHA 245
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 40/78 (51%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y + +L KN +A+ + +I + ++ + N+ + + R G+ E++ LF
Sbjct: 464 NLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLF 523
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ GL PD TY+ +
Sbjct: 524 SNLSSKGLQPDVWTYSIM 541
>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
Length = 812
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 41/74 (55%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y+ + L K G + AL++++ + D NV I ++LS L GK + +++L
Sbjct: 208 ATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGS 267
Query: 70 IKQSGLTPDAVTYN 83
+K G PD VTYN
Sbjct: 268 MKDKGCLPDEVTYN 281
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 38/65 (58%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
++G LKA ++ SI D +V N +++ L + + +++LF +++ G++PD +
Sbjct: 512 QSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEI 571
Query: 81 TYNTV 85
TY T+
Sbjct: 572 TYGTL 576
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ +K L +G L AL +YN + N N+++ L + G +LK+FD++
Sbjct: 175 YNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEML 234
Query: 72 QSGLTPDAVTYNTVYQS 88
G+ P+ Y + S
Sbjct: 235 DRGIMPNVKIYTVLLSS 251
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 32 YNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQ--SD 89
Y ++ + + +V + +++ G+ E +L D +K+ G PD YNTV + D
Sbjct: 335 YKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCD 394
Query: 90 H 90
H
Sbjct: 395 H 395
>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
Length = 794
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 41/74 (55%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y+ + L K G + AL++++ + D NV I ++LS L GK + +++L
Sbjct: 208 ATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGS 267
Query: 70 IKQSGLTPDAVTYN 83
+K G PD VTYN
Sbjct: 268 MKDKGCLPDEVTYN 281
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 38/65 (58%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
++G LKA ++ SI D +V N +++ L + + +++LF +++ G++PD +
Sbjct: 512 QSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEI 571
Query: 81 TYNTV 85
TY T+
Sbjct: 572 TYGTL 576
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ +K L +G L AL +YN + N N+++ L + G +LK+FD++
Sbjct: 175 YNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEML 234
Query: 72 QSGLTPDAVTYNTVYQS 88
G+ P+ Y + S
Sbjct: 235 DRGIMPNVKIYTVLLSS 251
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 32 YNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQ--SD 89
Y ++ + + +V + +++ G+ E +L D +K+ G PD YNTV + D
Sbjct: 335 YKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCD 394
Query: 90 H 90
H
Sbjct: 395 H 395
>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
Length = 693
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
SS + K + A++++ DE + +V N ++SC ++GK E +LK FDK+K+
Sbjct: 145 SSLMNMYAKCDQFVDAIKLF----DEFPQRDVGCWNAVISCYFKDGKAEMALKTFDKMKE 200
Query: 73 SGLTPDAVTYNTVYQS 88
G P++VT+ V S
Sbjct: 201 LGFEPNSVTFTVVVSS 216
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 1 MQQHGK-TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+Q G I +Y++ I + G +A E+ NS++ + K +F N +++ L + G+
Sbjct: 211 MEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGR 270
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + +F+++ GL+PD TYNT+
Sbjct: 271 YVRAKGVFNEMLSIGLSPDTTTYNTL 296
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
SI++ +S + L K G A E+YN I ++NV+ N++++ L ++ K +
Sbjct: 148 VSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPF 207
Query: 67 FDKIKQSGLTPDAVTYNTV 85
++Q G+ D VTYNT+
Sbjct: 208 LIDMEQKGIFADIVTYNTL 226
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I +NG +ALEI + + ++ ++V N IL+ L + + LFD++
Sbjct: 363 YTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMV 422
Query: 72 QSGLTPDAVTYNTV 85
+ G+ PD T+ T+
Sbjct: 423 ERGVVPDFCTFTTL 436
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
S+SS I +NG+ +AL + + + I ++++ RNG +L++ DK+
Sbjct: 327 SFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKM 386
Query: 71 KQSGLTPDAVTYNTV 85
+ G D V YNT+
Sbjct: 387 LEQGCALDVVAYNTI 401
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/59 (23%), Positives = 31/59 (52%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
+A +++ + + K + CN ++ R+G + + K+ G+ PD++TYNT+
Sbjct: 518 EAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTL 576
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 40/80 (50%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ + ++ IK ++G+ KA E + E + N +++ V+ + +
Sbjct: 532 KPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFF 591
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L +K++ GL PD VTYN +
Sbjct: 592 LINKMETKGLQPDVVTYNVI 611
>gi|302755512|ref|XP_002961180.1| hypothetical protein SELMODRAFT_21211 [Selaginella moellendorffii]
gi|300172119|gb|EFJ38719.1| hypothetical protein SELMODRAFT_21211 [Selaginella moellendorffii]
Length = 497
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 13/100 (13%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIY--------NSITDESD-----KVNVFICN 48
Q++ + + S+Y++ IK G G + +A ++ NS + E + N+ N
Sbjct: 115 QKNCRPTTSTYNTLIKGYGVAGQAEQAQQLVLHLLNKTRNSPSSEDGLEPVARPNLRTMN 174
Query: 49 LILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+L+ R G+ E + ++ IK +G+ PDAVTYNT+ ++
Sbjct: 175 TLLNAWCREGRLEEAWRVVAMIKSAGMQPDAVTYNTLAKA 214
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 39/77 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ K G + ++ + + K N+ +++SC +NG E L+L ++
Sbjct: 207 TYNTLAKAYAAAGRVAELEDLIADMKNARLKPNLRTYAILISCYCQNGMPERGLQLLSRL 266
Query: 71 KQSGLTPDAVTYNTVYQ 87
K GL PD V +NT+ +
Sbjct: 267 KFEGLHPDVVAFNTLLK 283
>gi|302766812|ref|XP_002966826.1| hypothetical protein SELMODRAFT_11024 [Selaginella moellendorffii]
gi|300164817|gb|EFJ31425.1| hypothetical protein SELMODRAFT_11024 [Selaginella moellendorffii]
Length = 484
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 13/100 (13%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIY--------NSITDESD-----KVNVFICN 48
Q++ + + S+Y++ IK G G + +A ++ NS + E + N+ N
Sbjct: 115 QKNCRPTTSTYNTLIKGYGVAGQAEQAQQLVLHLLNKTRNSPSSEDGLEPVARPNLRTMN 174
Query: 49 LILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+L+ R G+ E + ++ IK +G+ PDAVTYNT+ ++
Sbjct: 175 TLLNAWCREGRLEEAWRVVAMIKSAGMQPDAVTYNTLAKA 214
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 39/77 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ K G + ++ + + K N+ +++SC +NG E L+L ++
Sbjct: 207 TYNTLAKAYAAAGRVAELEDLIADMKNARLKPNLRTYAILISCYCQNGMPERGLQLLSRL 266
Query: 71 KQSGLTPDAVTYNTVYQ 87
K GL PD V +NT+ +
Sbjct: 267 KFEGLHPDVVAFNTLLK 283
>gi|255660962|gb|ACU25650.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 376
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ G +YS+ I L K N +AL + N + K NV + N +++ L KFE
Sbjct: 122 QKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFE 181
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
++++F ++ +P +TYNT+
Sbjct: 182 DAIRVFREMGTMHCSPTIITYNTL 205
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 45/81 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+ +YS +K L + +AL+++N +T + K +V + N+++ L GK + +L L+
Sbjct: 233 GVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKIQLALSLY 292
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
+ + P+ V++NT+ +
Sbjct: 293 FDMNRWKCAPNLVSHNTLMEG 313
>gi|147767652|emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
Length = 1563
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 47/81 (58%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +YS I L ++G +A ++++ + D N N ++ V+ G+ E L+++
Sbjct: 1316 NVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVY 1375
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
+++K+ G PDA+TYN + +S
Sbjct: 1376 NQMKRLGCPPDAITYNFLIES 1396
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I+ ++ N +A++I NS+ + +N N I C+ + G S+ ++F K+
Sbjct: 1389 TYNFLIESHCRDDNLEEAVKILNSVKKGCN-LNASSFNPIFGCISKLGDVNSAHRMFAKM 1447
Query: 71 KQSGLTPDAVTYNTV 85
K P+ VTYN +
Sbjct: 1448 KDLKCRPNTVTYNIL 1462
Score = 34.7 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 38/74 (51%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+S + + GN +A ++ + NV+ ++++ L R+G+ + +F ++
Sbjct: 1285 YTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFSEMI 1344
Query: 72 QSGLTPDAVTYNTV 85
G P+A+T+N +
Sbjct: 1345 DVGCDPNAITFNNL 1358
>gi|413923869|gb|AFW63801.1| hypothetical protein ZEAMMB73_133996 [Zea mays]
Length = 485
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I L K GN +A ++ ++ +++ N+++ L R GK + L +
Sbjct: 173 TYNSIISALCKAGNMTEAFKLEQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDNLLLDM 232
Query: 71 KQSGLTPDAVTYNTV 85
+GLTPD VTYNT+
Sbjct: 233 CSNGLTPDTVTYNTI 247
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 37/80 (46%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+T ++S+YI + +A + + +T N N I+S L + G + K
Sbjct: 133 QTDFIAFSAYINGRSRLDYVNEAYQAFAEMTSRGIVPNNITYNSIISALCKAGNMTEAFK 192
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L ++QSGL PD T N +
Sbjct: 193 LEQNMRQSGLVPDIYTSNIL 212
>gi|356528212|ref|XP_003532699.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Glycine max]
Length = 738
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 45/78 (57%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ SY + K + + G + A YN++ +ES + N++L + + + +++++ +
Sbjct: 191 TVKSYDALFKVILRRGRYMMAKRYYNAMLNESVEPTRHTYNILLWGMFLSLRLDTAVRFY 250
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ +K G+ PD VTYNT+
Sbjct: 251 EDMKSRGILPDVVTYNTL 268
>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 45/83 (54%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + +Y + I L K GN+ A+ + S+ ++ + NVF N I+ L ++ + +
Sbjct: 130 RPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFN 189
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
LF ++ G++PD TYN++ +
Sbjct: 190 LFSEMVTKGISPDIFTYNSLIHA 212
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 40/78 (51%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y + +L KN +A+ + +I + ++ + N+ + + R G+ E++ LF
Sbjct: 343 NLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLF 402
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ GL PD TY+ +
Sbjct: 403 SNLSSKGLQPDVWTYSIM 420
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 19/33 (57%)
Query: 53 CLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
C + GK +L LFDK+ G PD VTY T+
Sbjct: 107 CHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTL 139
>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
Length = 786
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ ++ GK GN +AL + + + + N + R G FE + + D
Sbjct: 280 VVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLD 339
Query: 69 KIKQSGLTPDAVTYNTV 85
+ GL P+A TYNTV
Sbjct: 340 TMASKGLLPNAFTYNTV 356
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 31/43 (72%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
++ I N +LS +NG + + ++FD IK+SGL+PD +TYN++
Sbjct: 595 DLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSL 637
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + G G +AL +++ + NV NL+L L + +F L++ ++
Sbjct: 352 TYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEM 411
Query: 71 KQSGLTPDAVTYNTV 85
+SG TP+ VT+NT+
Sbjct: 412 SRSGCTPNRVTWNTM 426
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 3 QHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDES-----DKVNVFICNLILSCLVRN 57
+ G S+ ++ LG+ G + ++ DE+ +++V +L L R
Sbjct: 132 KEGAADASALEMVVRALGREGQH----DAVCALLDETPLPPGSRLDVRAYTTVLHALSRA 187
Query: 58 GKFESSLKLFDKIKQSGLTPDAVTYNTV 85
G++E +L+LF ++++ G+ P VTYN V
Sbjct: 188 GRYERALELFAELRRQGVAPTLVTYNVV 215
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 40/80 (50%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S +Y++ I G+ G+ A ++YN +T + N +L+ L R G + ++ +
Sbjct: 454 SRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIV 513
Query: 68 DKIKQSGLTPDAVTYNTVYQ 87
K++ G P+ +Y+ + Q
Sbjct: 514 SKMRTKGFKPNEQSYSLLLQ 533
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+Q+G + +Y+ + G +A +++ + N F N +++ GK
Sbjct: 306 MEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGK 365
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +L LFD++K++G P+ TYN V
Sbjct: 366 VDEALALFDQMKKTGFVPNVNTYNLV 391
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
++S + KNG KA E+++SI ++ N ++ + + + K+ +++K
Sbjct: 599 FNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLK 658
Query: 72 QS-GLTPDAVTYNTV 85
S + PD V+YNTV
Sbjct: 659 CSQTMKPDVVSYNTV 673
>gi|359487106|ref|XP_002274114.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Vitis vinifera]
Length = 571
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 46/78 (58%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ SYS Y+ K+G +A+++Y + + +++V N ++ + + + S+++F
Sbjct: 352 SLYSYSIYMDIQCKSGKPWRAVKLYKEMKKKGIRLDVVAYNTVIRAIGLSEGVDFSIRVF 411
Query: 68 DKIKQSGLTPDAVTYNTV 85
++K+ G P+ VTYNT+
Sbjct: 412 REMKEVGCEPNVVTYNTI 429
Score = 40.8 bits (94), Expect = 0.100, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G + + +Y++ I+ +G + ++ ++ + + + NV N I+ L NG+
Sbjct: 379 MKKKGIRLDVVAYNTVIRAIGLSEGVDFSIRVFREMKEVGCEPNVVTYNTIIKLLCENGR 438
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVY 86
+ +FD++++ G P+ +TY+ +
Sbjct: 439 IREAYGVFDQMREKGYAPNVITYHCFF 465
>gi|302672411|ref|XP_003025895.1| hypothetical protein SCHCODRAFT_80118 [Schizophyllum commune H4-8]
gi|300099571|gb|EFI90992.1| hypothetical protein SCHCODRAFT_80118 [Schizophyllum commune H4-8]
Length = 1327
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTSISSYSSYI-KFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
++Q G S +Y++ I + ++ AL ++N + N+F+ N I+S L + K
Sbjct: 955 IEQGGYPSADAYAALIMQVKDTTDDTSNALALFNESQIGGVRPNLFLYNNIISKLSKARK 1014
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+++L+LF +K+ G+ P +VTY TV
Sbjct: 1015 TDTALELFQAMKEQGINPSSVTYGTV 1040
>gi|296085435|emb|CBI29167.3| unnamed protein product [Vitis vinifera]
Length = 192
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 46/78 (58%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ SYS Y+ K+G +A+++Y + + +++V N ++ + + + S+++F
Sbjct: 9 SLYSYSIYMDIQCKSGKPWRAVKLYKEMKKKGIRLDVVAYNTVIRAIGLSEGVDFSIRVF 68
Query: 68 DKIKQSGLTPDAVTYNTV 85
++K+ G P+ VTYNT+
Sbjct: 69 REMKEVGCEPNVVTYNTI 86
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/87 (20%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G + + +Y++ I+ +G + ++ ++ + + + NV N I+ L NG+
Sbjct: 36 MKKKGIRLDVVAYNTVIRAIGLSEGVDFSIRVFREMKEVGCEPNVVTYNTIIKLLCENGR 95
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVY 86
+ +FD++++ G P+ +TY+ +
Sbjct: 96 IREAYGVFDQMREKGYAPNVITYHCFF 122
>gi|356571194|ref|XP_003553764.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g04760, chloroplastic-like [Glycine max]
Length = 531
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 43/77 (55%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y I L K G A+E+ + + + ++ N IL+CL + + + +L +F+K+
Sbjct: 301 YDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLG 360
Query: 72 QSGLTPDAVTYNTVYQS 88
+ G +P+A +YNTV+ +
Sbjct: 361 EVGCSPNASSYNTVFSA 377
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF-- 67
SSY++ LG +G+ ++AL + + D D +V N ++SCL R+G + +++L
Sbjct: 369 SSYNTVFSALGSSGHKVRALGMILEMLDXVDP-DVIAYNSLISCLCRDGMVDEAIELLVD 427
Query: 68 DKIKQSGLTPDAVTYNTV 85
+++ S P V+YN V
Sbjct: 428 MEMESSECKPSVVSYNIV 445
Score = 39.3 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 38/75 (50%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+ ++ L G E+ + + + + NV ++++S L R+GK E + L
Sbjct: 228 VITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEGVGLLK 287
Query: 69 KIKQSGLTPDAVTYN 83
+K+ GL PD Y+
Sbjct: 288 DMKKKGLEPDGYCYD 302
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+S I + + G +A E+ +SI+ + ++V N++L L GK+E+ +L +
Sbjct: 197 YNSIIX-MCREGYVDRAFEVISSISSKGYALDVITYNILLRSLXNQGKWEAGFELMSDMV 255
Query: 72 QSGLTPDAVTYNTVYQS 88
G + VTY+ + S
Sbjct: 256 AKGCEANVVTYSVLISS 272
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 36/77 (46%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y+ I L G ALE N + E+ V +++ + G + ++KL D
Sbjct: 124 IVTYNILIGSLCSRGMLHAALEFKNQLLKENFNPTVVTYTILIEATLLQGGIDEAIKLLD 183
Query: 69 KIKQSGLTPDAVTYNTV 85
++ + L PD YN++
Sbjct: 184 EMFEINLQPDVFPYNSI 200
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G + ++ +++ ++ + G AL + + + S ++ + N+ + C + GK
Sbjct: 229 MQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGK 288
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + K F ++K GL PD VTY T+
Sbjct: 289 VDMAWKFFHEMKAQGLVPDDVTYTTL 314
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ SYS I L K G S + +++ + ++ ++V N ++ ++GK + + +L +
Sbjct: 587 VRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLE 646
Query: 69 KIKQSGLTPDAVTYNTV 85
++K GL P VTY +V
Sbjct: 647 EMKTKGLQPTVVTYGSV 663
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 36/74 (48%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+S I+ K G +IY + ++ + N + C+ + G+ E LF++IK
Sbjct: 520 YTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIK 579
Query: 72 QSGLTPDAVTYNTV 85
GL PD +Y+ +
Sbjct: 580 AQGLVPDVRSYSIL 593
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 39/78 (50%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + S+Y++ I L L +++ + + + NV + ++ R G+ +++L
Sbjct: 200 RPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALS 259
Query: 66 LFDKIKQSGLTPDAVTYN 83
L D++K + T D V YN
Sbjct: 260 LLDEMKSNSFTADLVLYN 277
Score = 37.7 bits (86), Expect = 0.91, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ I G G +A + + +V N IL+CL R GK E +L++ D
Sbjct: 343 VYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHD 402
Query: 69 KIKQSGLTPDAVTYNTV 85
+++Q P+ TYN +
Sbjct: 403 EMRQDA-APNLTTYNIL 418
>gi|326517954|dbj|BAK07229.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 549
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++HG K S+ +Y+S I+ + I N + + NV +++ L + G+
Sbjct: 290 MEEHGFKPSVITYTSLIEAYCMEKDFQTVYAILNEMRSKGCPPNVITYTIVMHALGKAGR 349
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +L +FDK++ G PDA YN++
Sbjct: 350 TQEALDIFDKVRGDGCAPDASFYNSL 375
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+ + LGK G + +AL+I++ + + + N ++ L R G+ E + +
Sbjct: 333 NVITYTIVMHALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLIYILGRAGRLEDANSVV 392
Query: 68 DKIKQSGLTPDAVTYNTVYQS--DH 90
DK++ +G+ P T+NT+ + DH
Sbjct: 393 DKMRMTGVRPTVATFNTLISAACDH 417
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ IK K G + KAL +++ + + + CNL+++ L R GK ++L+L +
Sbjct: 557 TYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDM 616
Query: 71 KQSGLTPDAVTYNTV 85
GL PD VTYN++
Sbjct: 617 IHRGLAPDVVTYNSL 631
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 45/81 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I Y+ ++ L KNG KAL++ ++D+ K ++F N ++ L + + E +L L+
Sbjct: 449 NIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALY 508
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
+ G+ + VTYNT+ +
Sbjct: 509 RDMLLDGVIANTVTYNTLIHA 529
Score = 41.2 bits (95), Expect = 0.069, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 36/70 (51%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGL 75
I L + G ALE+ + +V N +++ L + G + LF+K++ G+
Sbjct: 597 INGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGI 656
Query: 76 TPDAVTYNTV 85
PDA+TYNT+
Sbjct: 657 QPDAITYNTL 666
Score = 38.1 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M +G T ++ +Y++ + K +A + N ++ + ++N+ N++L L +NGK
Sbjct: 406 MSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGK 465
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+L + ++ G PD T+NT+
Sbjct: 466 VPKALDMLGEMSDKGCKPDIFTFNTL 491
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 23 GNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTY 82
GN A I+N I D +FI NL++ +NG F ++ LF ++++ GL+PD TY
Sbjct: 80 GNLHYAERIFNYI----DIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTY 135
Query: 83 NTVYQS 88
V+++
Sbjct: 136 PFVFKA 141
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITD-ESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
++ I+ K G K+LEI+N + + ++ IC L + NGK +L+LF ++
Sbjct: 404 TALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAM-----NGKTSKALELFAEMV 458
Query: 72 QSGLTPDAVTY 82
Q+G+ PD +T+
Sbjct: 459 QTGVKPDDITF 469
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y++ + +L KN +A+ + IT + N +L+ L + G+ E ++ L
Sbjct: 259 IHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR 318
Query: 69 KIKQSGLTPDAVTYNTV 85
KI +G TPD VTY ++
Sbjct: 319 KIVDNGCTPDVVTYTSL 335
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S +++S I L K G ++A + T +++ I++ L +N K + ++ L
Sbjct: 223 SAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALM 282
Query: 68 DKIKQSGLTPDAVTYNTV 85
+KI +G TP TYN +
Sbjct: 283 EKITANGCTPTIATYNAL 300
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M HG + + S+ I L K G A+ I+ S+ N + + ++ L + K
Sbjct: 390 MTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 449
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +L++ ++K++ TPD +TYN +
Sbjct: 450 MDCALEMLAQMKKAFCTPDTITYNIL 475
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 37/77 (48%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+S I LGK S +A +++ + ++ ++ L++ GK + ++
Sbjct: 329 VVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYK 388
Query: 69 KIKQSGLTPDAVTYNTV 85
+ G PD VT +T+
Sbjct: 389 TMTSHGCVPDVVTLSTM 405
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 40/74 (54%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ I+ L + G +A +Y ++T +V + ++ L + G+ +++++F ++
Sbjct: 367 YTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSME 426
Query: 72 QSGLTPDAVTYNTV 85
GL P+ V Y+ +
Sbjct: 427 ARGLAPNEVVYSAL 440
>gi|224099199|ref|XP_002311400.1| predicted protein [Populus trichocarpa]
gi|222851220|gb|EEE88767.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ G + ++ ++++ I K+G KA E+ + + K ++F + I+ CL R +
Sbjct: 325 MQDRGVSPNLVTFNTLISGHCKDGEVHKARELLQMLLELGLKPDIFTFSSIIDCLCRAQQ 384
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
F+ +L F ++ + G++P+AVTYN + +S
Sbjct: 385 FDDALGCFSEMVEWGISPNAVTYNILIRS 413
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 40/81 (49%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
K S Y + I+ L K G ++ N + + +VF N+++ C + ++
Sbjct: 260 AKLGFSFYLALIETLYKAGRGMEGDRYLNQMVKDRLVSDVFSYNMLIDCFCKANVMNKAV 319
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
+F ++ G++P+ VT+NT+
Sbjct: 320 MVFKVMQDRGVSPNLVTFNTL 340
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 40/83 (48%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K I ++SS I L + AL ++ + + N N+++ L G S+K
Sbjct: 366 KPDIFTFSSIIDCLCRAQQFDDALGCFSEMVEWGISPNAVTYNILIRSLCLIGDVGRSMK 425
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
L +++ G++PD ++N + QS
Sbjct: 426 LLKDMRKDGISPDIFSFNALIQS 448
>gi|297738897|emb|CBI28142.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 23 GNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTY 82
GN A I+N I D +FI NL++ +NG F ++ LF ++++ GL+PD TY
Sbjct: 80 GNLHYAERIFNYI----DIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTY 135
Query: 83 NTVYQS 88
V+++
Sbjct: 136 PFVFKA 141
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITD-ESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
++ I+ K G K+LEI+N + + ++ IC L + NGK +L+LF ++
Sbjct: 313 TALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAM-----NGKTSKALELFAEMV 367
Query: 72 QSGLTPDAVTY 82
Q+G+ PD +T+
Sbjct: 368 QTGVKPDDITF 378
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 46/77 (59%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y++ + L K+G A+EI N ++ + + N ++ L + GK E ++KL D
Sbjct: 257 IVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLD 316
Query: 69 KIKQSGLTPDAVTYNTV 85
++++ GL PD +TY+++
Sbjct: 317 EMRRKGLKPDIITYSSL 333
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 46/75 (61%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I L K G + +A+++ + + + K ++ + ++S L R GK + ++K F +
Sbjct: 294 TYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL 353
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ P+A+TYN++
Sbjct: 354 EGLGIRPNAITYNSI 368
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M HG T S SY+ + K +A+E + + ++ N +L+ L ++GK
Sbjct: 213 MPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGK 272
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++++ +++ G +P +TYNTV
Sbjct: 273 VDVAVEILNQLSSKGCSPVLITYNTV 298
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G K + +Y+ I + K G +A++ N++ + NV N+IL + G+
Sbjct: 108 MRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGR 167
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + KL + + G +P VT+N +
Sbjct: 168 WMDAEKLLSDMLRKGCSPSVVTFNIL 193
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+++ S+ +++ I FL + G +A++I + N N +L + K
Sbjct: 179 LRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKM 238
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +++ D + G PD VTYNT+
Sbjct: 239 DRAIEYLDIMVSRGCYPDIVTYNTL 263
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 48/83 (57%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ +I +Y+ + L K+ +A +++ S+ + ++N+ N+++ L++ G+ E ++
Sbjct: 858 QMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMD 917
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
LF I +GL PD VTY V ++
Sbjct: 918 LFAAIPANGLVPDVVTYRLVAEN 940
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 47/83 (56%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K I +Y+ + L K+ +A++++ ++ + ++N+ N+++ L++ G+ E ++
Sbjct: 620 KWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMD 679
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
LF I +GL + VTY V ++
Sbjct: 680 LFAAIPANGLVQNVVTYRLVVEN 702
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 40/80 (50%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K S+++Y + G + ++ N + N I N+ S + G + ++
Sbjct: 340 KPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMD 399
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F+K++Q GL+PDAV+Y +
Sbjct: 400 IFNKMRQQGLSPDAVSYGAL 419
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 43/75 (57%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ + L + G +A E+Y S+ + ++N++ N+IL+ L ++ + + K+F
Sbjct: 826 VVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQ 885
Query: 69 KIKQSGLTPDAVTYN 83
+ GL + +T+N
Sbjct: 886 SLCSKGLQLNIITFN 900
Score = 34.3 bits (77), Expect = 9.8, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 39/80 (48%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + SY++ I G +A ++ + K + F N +L + G+ +S+
Sbjct: 515 RPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYS 574
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
F K+ +G+TP VTYNT+
Sbjct: 575 HFRKMLSNGITPGVVTYNTI 594
>gi|297844198|ref|XP_002889980.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335822|gb|EFH66239.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 517
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
M+ G + SYS+ I+ + N+ KA +++ + + NV ++ +R G
Sbjct: 317 MEPRGFCDVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNS 376
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTVYQSDHI 91
+ KL D++ + GL+PD + Y T+ DH+
Sbjct: 377 SVAKKLLDQMTELGLSPDRIFYTTIL--DHL 405
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+Q G T++ +++S IK + GNS A ++ + +T+ + IL L ++G
Sbjct: 351 MRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGN 410
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + +F+ + + +TPDA++YN++
Sbjct: 411 VDKAYGIFNDMIEHEITPDAISYNSL 436
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 40/74 (54%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ + L K+GN KA I+N + + + N ++S L R+G+ ++KLF+ +K
Sbjct: 398 YTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMK 457
Query: 72 QSGLTPDAVTYNTV 85
PD +T+ +
Sbjct: 458 GKECCPDELTFKFI 471
>gi|255639677|gb|ACU20132.1| unknown [Glycine max]
Length = 276
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 1 MQQHGKTSISSYSSYIK----FLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVR 56
+++ + + SS SS+I K G K+L I++ + + +++ N++L L R
Sbjct: 163 LEEISEITCSSTSSFINKIIFAFAKCGQRDKSLVIFDHLKRQGYGLDLVTYNIVLDILGR 222
Query: 57 NGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
G+ + L +F IK +G PD V+YNT+
Sbjct: 223 TGRVDEMLDVFASIKDTGFVPDTVSYNTL 251
>gi|326504202|dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 634
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ S++S + L K+G+ A + + + + N+ N ++SC V+ G+F +L L+
Sbjct: 274 NVVSWTSMLCALAKHGSVDAARDWFEQMPER----NIISWNAMISCYVQGGRFPETLGLY 329
Query: 68 DKIKQSGLTPDAVT 81
+++K GLTPD VT
Sbjct: 330 NRMKSLGLTPDEVT 343
>gi|357159753|ref|XP_003578548.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Brachypodium distachyon]
Length = 460
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I + G +++AL++++ + + + N+++ CL R+G E + ++F +
Sbjct: 82 TYNSLIVAASRVGLTMRALDLFDEMLRAGIAPDAWSYNVLMHCLFRSGHPEDAYRVFADM 141
Query: 71 KQSGLTPDAVTYNT----VYQSDHIT 92
+ G+TP TYNT ++++ H T
Sbjct: 142 AEKGVTPCTTTYNTLLDGLFKAGHAT 167
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 1 MQQHGKTS-ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M + G T ++Y++ + L K G++ A ++ + V + N +++ L R+GK
Sbjct: 141 MAEKGVTPCTTTYNTLLDGLFKAGHATNAYRMFRYLQRVGLPVGIVTYNTMINGLCRSGK 200
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
+ + ++ ++ TP+AVTY TV +
Sbjct: 201 VGYARMILRELGRTEHTPNAVTYTTVMK 228
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 46/77 (59%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y++ + L K+G A+EI N ++ + + N ++ L + GK E +++L +
Sbjct: 418 IVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLE 477
Query: 69 KIKQSGLTPDAVTYNTV 85
++++ GL PD +TY+T+
Sbjct: 478 EMRRKGLKPDIITYSTL 494
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 4 HGKTSISSYSS--YIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
+G S ++S +++ L +NG + L+ + + D +V C ++ R+GK +
Sbjct: 99 NGSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTK 158
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++ + ++ SG PD +TYN +
Sbjct: 159 KATRIMEILENSGAVPDVITYNVL 182
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I L K G + A+E+ + + K ++ + +L L R GK + ++K+F +
Sbjct: 455 TYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDM 514
Query: 71 KQSGLTPDAVTYNTV 85
+ + P AVTYN +
Sbjct: 515 EGLSIKPSAVTYNAI 529
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G K + +Y+ I + K G +A++ N++ K NV N+IL + G+
Sbjct: 269 MRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGR 328
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + +L + + G +P VT+N +
Sbjct: 329 WMDAERLLSDMLRKGCSPSVVTFNIL 354
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M +HG S SY+ + + +A+E + ++ N +L+ L ++GK
Sbjct: 374 MPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGK 433
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
++++++ +++ G +P +TYNTV
Sbjct: 434 VDAAVEILNQLSSKGCSPVLITYNTV 459
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 39/77 (50%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ ++ L +G +A+E+ + +V +++ + ++KL D
Sbjct: 208 VVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLD 267
Query: 69 KIKQSGLTPDAVTYNTV 85
++++ G PD VTYN +
Sbjct: 268 EMRKKGCKPDVVTYNVL 284
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+ I K+G KALE+ ++ D V N IL L +GK + ++++ D
Sbjct: 176 VITYNVLIGGYCKSGEIDKALEVLERMSVAPDVVTY---NTILRSLCDSGKLKEAMEVLD 232
Query: 69 KIKQSGLTPDAVTYNTVYQS 88
+ Q PD +TY + ++
Sbjct: 233 RQLQRECYPDVITYTILIEA 252
>gi|357444861|ref|XP_003592708.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355481756|gb|AES62959.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 1430
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I+S+S I KN AL ++N + DK + I N ++ L ++ + E S +L
Sbjct: 425 NITSFSIVIDGFLKNDQLDLALSLFNDMRRFVDKPTILIYNNLIDSLCKSNRLEKSYELL 484
Query: 68 DKIKQSGLTPDAVTYNTVY 86
++K+ G+ P TYN++Y
Sbjct: 485 REMKELGIEPTHFTYNSIY 503
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 39/82 (47%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
QQ I SYS+ I L A++I+ + +V N+++ L + +F
Sbjct: 559 QQGFLPDIVSYSAAIGGLVNIQEVDHAMKIFKDLWSHGHCPDVVCFNVLIRGLCKVNRFT 618
Query: 62 SSLKLFDKIKQSGLTPDAVTYN 83
+ LF ++ + GL+P VTYN
Sbjct: 619 EAEDLFHELVKRGLSPSVVTYN 640
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS I L K+G +++ ++ ++ + K NV I ++ +NG ++ LF+++
Sbjct: 332 AYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERM 391
Query: 71 KQSGLTPDAVTYNTV 85
K G PD VTY +
Sbjct: 392 KGEGFEPDDVTYGVI 406
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 37/74 (50%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
YSS I LGK G +A + + + + + + N ++ L ++GK E +L LF +++
Sbjct: 438 YSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRME 497
Query: 72 QSGLTPDAVTYNTV 85
+ G TY +
Sbjct: 498 KEGCDQTVYTYTIL 511
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 39/74 (52%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ I L K+G +AL ++ + E V+ +++S L + + E +LKL+D +
Sbjct: 473 YNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMI 532
Query: 72 QSGLTPDAVTYNTV 85
G+TP ++ +
Sbjct: 533 DKGITPTTASFRAL 546
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITD---ESDKVNVFICNLILSCLVRNGKFESSLK 65
+ SY++ IK K GN+ KA+E + + E DK+ LI +C G F+S L
Sbjct: 260 VVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYL--TLIQACY-SEGNFDSCLH 316
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L+ ++++ GL Y+ V
Sbjct: 317 LYQEMEERGLEIPPHAYSLV 336
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+S + L K+G + ALE+ + + D N+ N IL + +N + ++ L
Sbjct: 372 NVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLL 431
Query: 68 DKIKQSGLTPDAVTYNTV 85
KIK+ G+ PD TY +
Sbjct: 432 TKIKEKGIQPDIFTYTVL 449
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Query: 4 HGKTSISSYSSYIKFLG---KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
H I + K LG K AL + + K + CNL+++C + G
Sbjct: 50 HKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHI 109
Query: 61 ESSLKLFDKIKQSGLTPDAVTY 82
+ S +F KI + G PDAVT+
Sbjct: 110 KFSFSVFAKILKKGYHPDAVTF 131
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTS-ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M G+ S I +Y+S + + KN + KA+ + I ++ + ++F ++++ L + G+
Sbjct: 399 MHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGR 458
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + K+F+ + G +P+ TY ++
Sbjct: 459 LDDAQKVFEDLLVKGYSPNIYTYTSL 484
>gi|302809506|ref|XP_002986446.1| hypothetical protein SELMODRAFT_123789 [Selaginella moellendorffii]
gi|300145982|gb|EFJ12655.1| hypothetical protein SELMODRAFT_123789 [Selaginella moellendorffii]
Length = 642
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESD---KVNVFICNLILSCLVRNGKFE 61
+ ++ S+SS I +NG+S A+E+Y+ + S +V N I++ L ++G+ +
Sbjct: 79 ARKNLFSWSSMIAAFAQNGHSTAAVELYSDMIQRSGLRPDSDVIAWNSIIAVLSQHGELD 138
Query: 62 SSLKLFDKIKQSGLTPDAVT 81
+L+L+ K+ +S + PD +T
Sbjct: 139 RALELYRKMDESAVPPDRIT 158
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDES-DKVNVFICNLILSCLVRNGKFESS 63
G S +S+ I ++G +ALE++ + + VN N ++ +NG +
Sbjct: 357 GDPDASCWSAMIASYAQSGYGSQALELFQRMDRRGINTVNTATWNAMIGAYAQNGHPGAG 416
Query: 64 LKLFDKIKQSGLTPDAVT 81
L+L+ ++K G+ PD T
Sbjct: 417 LELYQQMKSQGIQPDRAT 434
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 43/77 (55%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +YS+ + G +A ++N + D+ K N+F +++++ + +++LF
Sbjct: 308 IITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFG 367
Query: 69 KIKQSGLTPDAVTYNTV 85
+I Q GL PD VTY+T+
Sbjct: 368 EISQKGLKPDTVTYSTI 384
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 43/80 (53%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K +I SYS I K N KA++++ I+ + K + + IL L+ G+ + K
Sbjct: 340 KPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKK 399
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+FD++ + G TPD ++T+
Sbjct: 400 IFDEMLRVGPTPDICLHSTL 419
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 41/74 (55%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y + + L K G++ K L + + + K +V ++++ L ++ ++++ L +++K
Sbjct: 171 YGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMK 230
Query: 72 QSGLTPDAVTYNTV 85
Q + P+ TYN++
Sbjct: 231 QKNIPPNIFTYNSL 244
>gi|255579214|ref|XP_002530453.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529998|gb|EEF31923.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 391
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M Q G + SYS Y+ + K G KA+++Y + + K++V N+++ + +
Sbjct: 163 MDQKGVHKDLHSYSIYMDIVCKGGKPWKAVKLYKEMKRKGMKLDVVSYNIVVRAVGLSEG 222
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +++++ ++K+ G P+ VTYNT+
Sbjct: 223 VDFAMRVYREMKELGCMPNVVTYNTI 248
>gi|225445222|ref|XP_002280919.1| PREDICTED: pentatricopeptide repeat-containing protein At5g21222
[Vitis vinifera]
gi|297738818|emb|CBI28063.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 44/78 (56%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ S + + L + G +A I+NS+T+E + + +L+ L R +F+S L
Sbjct: 70 TVRSRTKLMNILIEKGKPQEAQLIFNSLTEEGHRPTLITYTTLLAALTRQKRFKSIPSLI 129
Query: 68 DKIKQSGLTPDAVTYNTV 85
K++++GL PD+V +N +
Sbjct: 130 SKLEKNGLKPDSVFFNAM 147
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESD-KVNVFICNLILSCLVRNG 58
M+ G K + S++++ IK G G + L++ + ++ E + K N N ++
Sbjct: 167 MKDRGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLMSQEENVKPNDRTFNSLIRAWCNKK 226
Query: 59 KFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+ + + K+ SGL PD VTYNT+ ++
Sbjct: 227 RITEAWNVVYKMAASGLQPDVVTYNTLARA 256
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 41/82 (50%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ Y+ I L K G E+++ + DE K NV+ ++ L + G + K
Sbjct: 339 KPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHK 398
Query: 66 LFDKIKQSGLTPDAVTYNTVYQ 87
LF K+++ G TPD YN + Q
Sbjct: 399 LFRKMEEDGCTPDKCAYNVIIQ 420
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 4 HGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFES 62
HG T +I +Y + L K+GN +A ++ + + K N+ I +++ L + GK +
Sbjct: 301 HGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKD 360
Query: 63 SLKLFDKIKQSGLTPDAVTYNTV 85
+LF ++ GL P+ TY +
Sbjct: 361 GKELFSRLIDEGLKPNVYTYTAL 383
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 43/78 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
SI ++++ + L G + + +Y+ + + NV+ N+I++ L ++GK +L
Sbjct: 131 SIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFL 190
Query: 68 DKIKQSGLTPDAVTYNTV 85
++++ G P+ V Y+T+
Sbjct: 191 KQMEKVGCVPNVVNYSTL 208
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I GK G + + + S + +V N +++C ++GK L+ + ++
Sbjct: 170 TYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREM 229
Query: 71 KQSGLTPDAVTYNTV 85
KQSGL P+ V+Y+T+
Sbjct: 230 KQSGLKPNVVSYSTL 244
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 19 LGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPD 78
K G + + + K VF N+++ C+ + G E++ LF+++K GL PD
Sbjct: 108 FAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPD 167
Query: 79 AVTYNTV 85
VTYN++
Sbjct: 168 TVTYNSM 174
Score = 34.3 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 38/81 (46%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+S I K+G K LE Y + K NV + ++ + + ++K +
Sbjct: 203 VITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYV 262
Query: 69 KIKQSGLTPDAVTYNTVYQSD 89
+++ G P+ TY ++ ++
Sbjct: 263 DMRRVGHVPNEFTYTSLVDAN 283
>gi|414872445|tpg|DAA51002.1| TPA: hypothetical protein ZEAMMB73_961198 [Zea mays]
Length = 765
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 48/77 (62%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+++Y+ I+ LG G + A I + ++ + +++ + N ++S L + GK E + LF+
Sbjct: 643 VATYNLIIQGLGLMGKADVARTIIDRLSKKGVYMDIVMYNTLISQLGKVGKVEEAGCLFE 702
Query: 69 KIKQSGLTPDAVTYNTV 85
+I +SG+ PD VT+NT+
Sbjct: 703 QIIRSGMKPDVVTFNTL 719
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFIC--NLILSCLVRNGKFESSL 64
+++ Y+ I GK +L ++ ++ + V IC N ++ LV G+ +L
Sbjct: 222 SNVRLYNICIHAFGKWRQLDMSLGLFAAMKAATPPVEPDICTYNSVIRALVVGGRVPDAL 281
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
++D++K SG+ PD TY V
Sbjct: 282 VIYDEMKSSGIEPDVFTYRAV 302
>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 831
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ SY I K G KAL+I N + D+ K N ++I+ V+ G ++ +F
Sbjct: 369 TVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVF 428
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
+ + +G+ PD +TYN + +
Sbjct: 429 EDMSNAGIKPDGITYNILMNA 449
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G T I SY+S+I K G+ LKA E + + + N+ ++
Sbjct: 641 MRHEGLTPDIHSYTSFINACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASY 700
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
E +L +D++K +G+ PD Y+ + S
Sbjct: 701 PEKALICYDEMKSAGMIPDKPLYHCIMTS 729
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 36/79 (45%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y+S +K K G L I + +N +I N++L + G +
Sbjct: 577 KPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASD 636
Query: 66 LFDKIKQSGLTPDAVTYNT 84
+ K++ GLTPD +Y +
Sbjct: 637 IMQKMRHEGLTPDIHSYTS 655
>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16420, mitochondrial; Flags: Precursor
gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 535
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
N+F CNL++ L + ES+ K+ D+I GL P+ VTY T+
Sbjct: 190 NIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTI 232
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 44/80 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +Y++ I + + G +A +++ + + K N F N+++ L +NG + +++
Sbjct: 399 SLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVL 458
Query: 68 DKIKQSGLTPDAVTYNTVYQ 87
+++ + G P+ T+ +++
Sbjct: 459 EEMLEIGCFPNKTTFLILFE 478
>gi|414886512|tpg|DAA62526.1| TPA: hypothetical protein ZEAMMB73_338715 [Zea mays]
Length = 901
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M HG ++++ I G +GNS +A ++ S+ K + N++++ G
Sbjct: 290 MPAHGVMPDTYTFNTLINIFGFSGNSAQAEVLFASMVIRGVKPDTKTYNVMMTVFASIGD 349
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
E LK + +I+ +GL PDAVTY + Q
Sbjct: 350 LEGVLKYYCQIRNAGLHPDAVTYRILLQ 377
>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 49/87 (56%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ + + +Y+ I+ LGK G +A ++ + E + + + N +++ L + G+ +
Sbjct: 289 HQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLD 348
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTVYQS 88
++KLF++++ P VTYNT+ ++
Sbjct: 349 DAIKLFEEMETLRCIPSVVTYNTIIKA 375
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 42/84 (50%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
G +S Y+ IK LGK G A+++++ + NV+ N ++S L R G + +L
Sbjct: 468 GSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEAL 527
Query: 65 KLFDKIKQSGLTPDAVTYNTVYQS 88
+++ G PD +YN + +
Sbjct: 528 TTMRRMQDHGCIPDINSYNIILNA 551
Score = 42.0 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y++ + L + G +AL + D ++ N+IL+ L + G + ++ +
Sbjct: 506 NVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGML 565
Query: 68 DKIKQSGLTPDAVTYNTV 85
+KQS + PDAV+YNTV
Sbjct: 566 CNMKQSAIKPDAVSYNTV 583
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ HG I+SY+ + L K G +A+ + ++ + K + N +L L G
Sbjct: 533 MQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGM 592
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
FE + KL ++ G D +TY+++ ++
Sbjct: 593 FEEAAKLMKEMNAIGFDYDLITYSSILEA 621
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 39/76 (51%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y S I LGK A E++ + + + + +++ L + G+ + ++ LFD+
Sbjct: 438 AAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDE 497
Query: 70 IKQSGLTPDAVTYNTV 85
+ + G TP+ YN +
Sbjct: 498 MNRLGCTPNVYAYNAL 513
>gi|293333246|ref|NP_001169278.1| uncharacterized protein LOC100383141 [Zea mays]
gi|224028343|gb|ACN33247.1| unknown [Zea mays]
Length = 901
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M HG ++++ I G +GNS +A ++ S+ K + N++++ G
Sbjct: 290 MPAHGVMPDTYTFNTLINIFGFSGNSAQAEVLFASMVIRGVKPDTKTYNVMMTVFASIGD 349
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
E LK + +I+ +GL PDAVTY + Q
Sbjct: 350 LEGVLKYYCQIRNAGLHPDAVTYRILLQ 377
>gi|224117008|ref|XP_002317451.1| predicted protein [Populus trichocarpa]
gi|222860516|gb|EEE98063.1| predicted protein [Populus trichocarpa]
Length = 461
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 41/74 (55%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
YS+ I L K G +AL ++ + + K + N+I++ ++ FE++ +L D++
Sbjct: 259 YSTLISGLFKAGRKEEALGVWEDMKERGYKPDTVTYNVIINLFCKDKDFEAAYRLLDEMV 318
Query: 72 QSGLTPDAVTYNTV 85
+ G PD ++YN +
Sbjct: 319 EKGCKPDVISYNVI 332
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 41/74 (55%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+S IK + KNG A + + +++ I + ++S L + G+ E +L +++ +K
Sbjct: 224 YASLIKGVCKNGELSLAFRLKKEMIRNKIELDPAIYSTLISGLFKAGRKEEALGVWEDMK 283
Query: 72 QSGLTPDAVTYNTV 85
+ G PD VTYN +
Sbjct: 284 ERGYKPDTVTYNVI 297
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G K +Y+ I K+ + A + + + ++ K +V N+IL L GK
Sbjct: 282 MKERGYKPDTVTYNVIINLFCKDKDFEAAYRLLDEMVEKGCKPDVISYNVILRELFEEGK 341
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVY 86
+ LF+ + + G PD V+Y ++
Sbjct: 342 RGEANDLFEDMPRRGCAPDVVSYRILF 368
>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 588
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 45/71 (63%)
Query: 15 YIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSG 74
++ L KNG +A++++N + + K+++ ++ L + GK E++ +LF+K+ + G
Sbjct: 418 FLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEG 477
Query: 75 LTPDAVTYNTV 85
+ PDA+ Y+++
Sbjct: 478 IQPDAMAYSSM 488
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 45/80 (56%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ ++ SYS I L K GN +A+ ++N + D+ + NV ++++ L + G+ + K
Sbjct: 234 RPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKK 293
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L + + Q G+ P+ TY ++
Sbjct: 294 LLEMMIQIGIVPNLFTYTSL 313
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/83 (21%), Positives = 42/83 (50%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K I ++ I L K G A E++ + +E + + + ++ + G+ + +
Sbjct: 444 KLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANI 503
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
LF K++++G +PD +TY+ + +
Sbjct: 504 LFQKMEENGCSPDLITYSILMRG 526
>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
Length = 1091
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 40/68 (58%)
Query: 15 YIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSG 74
+I + GK+G SLKA++ Y + + +V N +L L +G+ + ++F ++K G
Sbjct: 422 FINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMG 481
Query: 75 LTPDAVTY 82
++PD +TY
Sbjct: 482 VSPDTITY 489
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 14 SYIKFL---GKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YI L G +G+S +E++N++ + N+ ++ L + G+ + +L +FD++
Sbjct: 313 TYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEM 372
Query: 71 KQSGLTPDAVTYNTV 85
K+ G++P+ +YN++
Sbjct: 373 KEKGMSPEQYSYNSL 387
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + LG+ G + +++ +T N+ N +L CL +NG+ ++ + +
Sbjct: 558 TYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSM 617
Query: 71 KQSGLTPDAVTYNTV 85
+ G PD +YNTV
Sbjct: 618 TEKGCAPDLSSYNTV 632
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G K ++ SY+ I+ LG+ +A I + D K +V +I+ L G+
Sbjct: 232 MEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGR 291
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +F K+K S PD VTY T+
Sbjct: 292 LSDAKAVFWKMKASDQKPDRVTYITL 317
Score = 37.7 bits (86), Expect = 0.98, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 38/80 (47%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +YS + GK + L + N + K NV+ + + L + +F+ + +
Sbjct: 205 SVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHIL 264
Query: 68 DKIKQSGLTPDAVTYNTVYQ 87
K++ SG PD VT+ + Q
Sbjct: 265 GKMEDSGCKPDVVTHTVIIQ 284
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 45/85 (52%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
++Q I SY+ I L G L + + + + ++ + NL++ L ++ +
Sbjct: 933 VEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERI 992
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
E ++ LF+++K+ G+ P+ TYN++
Sbjct: 993 EEAVSLFNEMKKKGIIPNLYTYNSL 1017
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ IK K + +A+ ++ + + +V N ++ L + GK + +LF K+
Sbjct: 488 TYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKL 547
Query: 71 KQSGLTPDAVTYNTV 85
K+ + P TYNT+
Sbjct: 548 KEMKIEPTNGTYNTL 562
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ + +S I L K G +A ++++ + + + N +LS L R GK + ++L +
Sbjct: 521 VLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLE 580
Query: 69 KIKQSGLTPDAVTYNTV 85
++ ++ P+ +TYNTV
Sbjct: 581 EMTRTIYPPNLITYNTV 597
Score = 34.3 bits (77), Expect = 9.7, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 38/72 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y + L K+G + A ++N + + + N I N++L+ G E+ +LF+K+
Sbjct: 873 TYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKM 932
Query: 71 KQSGLTPDAVTY 82
+ G+ PD +Y
Sbjct: 933 VEQGINPDIKSY 944
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+ I K GN KALEI+ +++ + V ++ L + G+ + + KLFD
Sbjct: 656 VFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFD 715
Query: 69 KIKQSGLTPDAVTYNTVYQS 88
+ + G+ PD V YN + S
Sbjct: 716 EAVRRGIRPDLVLYNALINS 735
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ I +GN +A EI + + + N ++ L G+ + + KL D++
Sbjct: 729 YNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT 788
Query: 72 QSGLTPDAVTYNTV 85
+ G+ PD VTYNT+
Sbjct: 789 ERGIQPDLVTYNTL 802
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M + G + + +Y++ I G+ AL I N + ++ + N ++ L +NG+
Sbjct: 787 MTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 846
Query: 60 FESSLKLFDKIKQSGLTPDAVTY 82
+ + + ++ ++G+TPD TY
Sbjct: 847 GDDAENMVKEMVENGITPDDSTY 869
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M + G + ++ +Y++ I L K G + ++++ + ++ + N +++ +G
Sbjct: 682 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 741
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + ++ ++++ + PD VTYNT+
Sbjct: 742 IDRAFEIMGEMEKKRIAPDDVTYNTL 767
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G T S+++Y+S + ++ N ++ EI I + + ++ N ++ RNG+
Sbjct: 647 MKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGR 706
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+ ++ ++++SG PD +TYNT S
Sbjct: 707 MRDASRVLSEMRESGPAPDIITYNTFIAS 735
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 46/78 (58%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
SI +Y+S I ++G ALE+ N + ++ K +VF +LS + GK ++++++F
Sbjct: 340 SIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIF 399
Query: 68 DKIKQSGLTPDAVTYNTV 85
++++ G P+ T+N +
Sbjct: 400 EEMRNEGCKPNICTFNAL 417
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 42/80 (52%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y++ + K G A++I+ + +E K N+ N ++ GKF +K
Sbjct: 373 KPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMK 432
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F+ IK +PD VT+NT+
Sbjct: 433 VFEDIKTFQCSPDIVTWNTL 452
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + GK+ S +A+E+ + ++ N ++S R+G E +L+L +++
Sbjct: 308 TYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQM 367
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ PD TY T+
Sbjct: 368 VEKGIKPDVFTYTTL 382
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 37/70 (52%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGL 75
I LGK G A + +++ + V+V+ +++ NG++ ++ +F K+++ G
Sbjct: 172 ISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGC 231
Query: 76 TPDAVTYNTV 85
P +TYN +
Sbjct: 232 KPTLITYNVI 241
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNG-KFESSLKLF 67
+ +Y+S I NG +A+ ++ + + K + N+IL+ + G + + L
Sbjct: 200 VYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPWNKMVGLV 259
Query: 68 DKIKQSGLTPDAVTYNTV 85
D++K +G+ PD+ TYNT+
Sbjct: 260 DRMKSAGIAPDSYTYNTL 277
Score = 38.9 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G K +I ++++ IK G G + ++++ I ++ N +LS +NG
Sbjct: 402 MRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGM 461
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+F ++K++G P+ T+NT+ S
Sbjct: 462 DSEVSGVFKEMKRAGFVPERDTFNTLISS 490
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSL-KALEIYNSITDESDKVNVFICNLILSCLVRNG 58
M++ G K ++ +Y+ + GK G K + + + + + + N ++SC R
Sbjct: 226 MEEVGCKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGN 285
Query: 59 KFESSLKLFDKIKQSGLTPDAVTYNTV 85
+E + + ++K +G +PD VTYN +
Sbjct: 286 LYEEAAGVLKEMKLAGFSPDKVTYNAL 312
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+ I K GN KALEI+ +++ + V ++ L + G+ + + KLFD
Sbjct: 287 VFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFD 346
Query: 69 KIKQSGLTPDAVTYNTVYQS 88
+ + G+ PD V YN + S
Sbjct: 347 EAVRRGIRPDLVLYNALINS 366
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ I +GN +A EI + + + N ++ L G+ + + KL D++
Sbjct: 360 YNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT 419
Query: 72 QSGLTPDAVTYNTV 85
+ G+ PD VTYNT+
Sbjct: 420 ERGIQPDLVTYNTL 433
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M + G + + +Y++ I G+ AL I N + ++ + N ++ L +NG+
Sbjct: 418 MTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 477
Query: 60 FESSLKLFDKIKQSGLTPDAVTY 82
+ + + ++ ++G+TPD TY
Sbjct: 478 GDDAENMVKEMVENGITPDDSTY 500
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M + G + ++ +Y++ I L K G + ++++ + ++ + N +++ +G
Sbjct: 313 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 372
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + ++ ++++ + PD VTYNT+
Sbjct: 373 IDRAFEIMGEMEKKRIAPDDVTYNTL 398
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+ I K GN KALEI+ +++ + V ++ L + G+ + + KLFD
Sbjct: 661 VFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFD 720
Query: 69 KIKQSGLTPDAVTYNTVYQS 88
+ + G+ PD V YN + S
Sbjct: 721 EAVRRGIRPDLVLYNALINS 740
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ I +GN +A EI + + + N ++ L G+ + + KL D++
Sbjct: 734 YNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT 793
Query: 72 QSGLTPDAVTYNTV 85
+ G+ PD VTYNT+
Sbjct: 794 ERGIQPDLVTYNTL 807
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M + G + + +Y++ I G+ AL I N + ++ + N ++ L +NG+
Sbjct: 792 MTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 851
Query: 60 FESSLKLFDKIKQSGLTPDAVTY 82
+ + + ++ ++G+TPD TY
Sbjct: 852 GDDAENMVKEMVENGITPDDSTY 874
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M + G + ++ +Y++ I L K G + ++++ + ++ + N +++ +G
Sbjct: 687 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 746
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + ++ ++++ + PD VTYNT+
Sbjct: 747 IDRAFEIMGEMEKKRIAPDDVTYNTL 772
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ I L K G + +ALE+ N + + + ++ + I + L R + E +++ F K+
Sbjct: 405 SYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKV 464
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ P+ V YN +
Sbjct: 465 QDMGIRPNTVLYNAI 479
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I+ L G + AL + + + +V ++L + ++ ++KL D++
Sbjct: 160 TYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 219
Query: 71 KQSGLTPDAVTYNTV 85
+ G TPD VTYN V
Sbjct: 220 RDKGCTPDIVTYNVV 234
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 44/77 (57%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I SY++ + L ++G A+E+ + + D+ + N ++ L + GK + +L+L +
Sbjct: 368 IVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLN 427
Query: 69 KIKQSGLTPDAVTYNTV 85
++ GL PD +TY+T+
Sbjct: 428 EMVSKGLQPDIITYSTI 444
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 30/46 (65%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
NV N+++S L R G E +L++ ++I + G TP++++YN + +
Sbjct: 297 NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHA 342
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M Q G ++ +++ I FL + G ALE+ I N N +L + K
Sbjct: 289 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKK 348
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++ D + G PD V+YNT+
Sbjct: 349 MDKAMAFLDLMVSRGCYPDIVSYNTL 374
Score = 34.3 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 37/75 (49%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY+ + K KA+ + + ++ N +L+ L R+G+ + +++L ++
Sbjct: 335 SYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL 394
Query: 71 KQSGLTPDAVTYNTV 85
K G P ++YNTV
Sbjct: 395 KDKGCAPVLISYNTV 409
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ I L K G + +ALE+ N + + + ++ + I + L R + E +++ F K+
Sbjct: 279 SYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKV 338
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ P+ V YN +
Sbjct: 339 QDMGIRPNTVLYNAI 353
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I+ L G + AL + + + +V ++L + ++ ++KL D++
Sbjct: 34 TYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 93
Query: 71 KQSGLTPDAVTYNTV 85
+ G TPD VTYN V
Sbjct: 94 RDKGCTPDIVTYNVV 108
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 44/77 (57%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I SY++ + L ++G A+E+ + + D+ + N ++ L + GK + +L+L +
Sbjct: 242 IVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLN 301
Query: 69 KIKQSGLTPDAVTYNTV 85
++ GL PD +TY+T+
Sbjct: 302 EMVSKGLQPDIITYSTI 318
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 30/46 (65%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
NV N+++S L R G E +L++ ++I + G TP++++YN + +
Sbjct: 171 NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHA 216
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M Q G ++ +++ I FL + G ALE+ I N N +L + K
Sbjct: 163 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKK 222
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++ D + G PD V+YNT+
Sbjct: 223 MDKAMAFLDLMVSRGCYPDIVSYNTL 248
Score = 34.3 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 37/75 (49%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY+ + K KA+ + + ++ N +L+ L R+G+ + +++L ++
Sbjct: 209 SYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL 268
Query: 71 KQSGLTPDAVTYNTV 85
K G P ++YNTV
Sbjct: 269 KDKGCAPVLISYNTV 283
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ I L K G + +ALE+ N + + + ++ + I + L R + E +++ F K+
Sbjct: 407 SYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKV 466
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ P+ V YN +
Sbjct: 467 QDMGIRPNTVLYNAI 481
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 44/77 (57%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I SY++ + L ++G A+E+ + + D+ + N ++ L + GK + +L+L +
Sbjct: 370 IVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLN 429
Query: 69 KIKQSGLTPDAVTYNTV 85
++ GL PD +TY+T+
Sbjct: 430 EMVSKGLQPDIITYSTI 446
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 36/72 (50%)
Query: 14 SYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQS 73
+ I+ L G + AL + + + +V ++L + ++ ++KL D+++
Sbjct: 165 TLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDK 224
Query: 74 GLTPDAVTYNTV 85
G TPD VTYN V
Sbjct: 225 GCTPDIVTYNVV 236
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M Q G ++ +++ I FL + G ALE+ I N N +L + K
Sbjct: 291 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKK 350
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++ D + G PD V+YNT+
Sbjct: 351 MDKAMAFLDLMVSRGCYPDIVSYNTL 376
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 30/46 (65%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
NV N+++S L R G E +L++ ++I + G +P++++YN + +
Sbjct: 299 NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHA 344
Score = 34.3 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 37/75 (49%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY+ + K KA+ + + ++ N +L+ L R+G+ + +++L ++
Sbjct: 337 SYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL 396
Query: 71 KQSGLTPDAVTYNTV 85
K G P ++YNTV
Sbjct: 397 KDKGCAPVLISYNTV 411
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ I L K G + +ALE+ N + + + ++ + I + L R + E +++ F K+
Sbjct: 204 SYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKV 263
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ P+ V YN +
Sbjct: 264 QDMGIRPNTVLYNAI 278
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 44/77 (57%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I SY++ + L ++G A+E+ + + D+ + N ++ L + GK + +L+L +
Sbjct: 167 IVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLN 226
Query: 69 KIKQSGLTPDAVTYNTV 85
++ GL PD +TY+T+
Sbjct: 227 EMVSKGLQPDIITYSTI 243
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 30/46 (65%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
NV N+++S L R G E +L++ ++I + G TP++++YN + +
Sbjct: 96 NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHA 141
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M Q G ++ +++ I FL + G ALE+ I N N +L + K
Sbjct: 88 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKK 147
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++ D + G PD V+YNT+
Sbjct: 148 MDKAMAFLDLMVSRGCYPDIVSYNTL 173
Score = 34.3 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 37/75 (49%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY+ + K KA+ + + ++ N +L+ L R+G+ + +++L ++
Sbjct: 134 SYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL 193
Query: 71 KQSGLTPDAVTYNTV 85
K G P ++YNTV
Sbjct: 194 KDKGCAPVLISYNTV 208
>gi|242062226|ref|XP_002452402.1| hypothetical protein SORBIDRAFT_04g025130 [Sorghum bicolor]
gi|241932233|gb|EES05378.1| hypothetical protein SORBIDRAFT_04g025130 [Sorghum bicolor]
Length = 506
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ ++ K N + EI +S++ + NV +I++ L + +FE +L + D
Sbjct: 260 VITYTAVLEAYCKQRNFRRVYEILDSMSSQGCHPNVITYTMIMTSLTKCERFEEALSVSD 319
Query: 69 KIKQSGLTPDAVTYNTV 85
++K SG PD + YN +
Sbjct: 320 RMKSSGCKPDTLFYNAL 336
>gi|225459754|ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Vitis vinifera]
Length = 531
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 48/83 (57%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ ++ +YS I L ++G +A ++++ + D N N ++ V+ G+ E L+
Sbjct: 282 QPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQ 341
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
+++++K+ G PDA+TYN + +S
Sbjct: 342 VYNQMKRLGCPPDAITYNFLIES 364
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 39/74 (52%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+S + + GN +A ++ + + NV+ ++++ L R+G+ + +F ++
Sbjct: 253 YTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMI 312
Query: 72 QSGLTPDAVTYNTV 85
G P+A+T+N +
Sbjct: 313 DVGCDPNAITFNNL 326
Score = 34.3 bits (77), Expect = 9.1, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I+ ++ N +A++I NS+ + +N N I C+ + G S+ ++F K+
Sbjct: 357 TYNFLIESHCRDDNLEEAVKILNSVKKGCN-LNASSFNPIFGCISKLGDVNSAHRMFAKM 415
Query: 71 KQSGLTPDAVTYNTV 85
K P+ VTYN +
Sbjct: 416 KDLKCRPNTVTYNIL 430
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 22 NGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVT 81
N + AL +Y + D K+N + C+++L+ L + GK E + ++ + GL P+ V
Sbjct: 332 NEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVI 391
Query: 82 YNTV 85
YNT+
Sbjct: 392 YNTM 395
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
K LE++N + + +VFI N+++ L + + + +LFD++ L P +TYNT+
Sbjct: 197 KGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTL 255
>gi|357162065|ref|XP_003579293.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Brachypodium distachyon]
Length = 858
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +YS+ I K G A +Y + K +V + + + L +NG E +L L
Sbjct: 478 SVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLVEWALSLL 537
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ + + G+ P+ VTYNT+
Sbjct: 538 NDMTEMGIKPNVVTYNTI 555
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 45/77 (58%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y+++I + K GN A+++ + ++ K NV + ++ + K++ +LKL++
Sbjct: 339 IYTYNTFIDAICKCGNIELAMQVLLDMEAKNVKPNVVTYSTLIDGYSKLEKYDEALKLYE 398
Query: 69 KIKQSGLTPDAVTYNTV 85
K+K G+ D V YNTV
Sbjct: 399 KMKSLGIQLDRVCYNTV 415
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 43/80 (53%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ +YS+ I K +AL++Y + +++ N +L+ V+ GK+
Sbjct: 371 KPNVVTYSTLIDGYSKLEKYDEALKLYEKMKSLGIQLDRVCYNTVLAIYVKAGKYGEIAI 430
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+ D+++ SG+ D VTYN++
Sbjct: 431 VCDEMEDSGIEKDTVTYNSL 450
>gi|296083087|emb|CBI22491.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G T S+++Y+S + ++ N ++ EI I + + ++ N ++ RNG+
Sbjct: 375 MKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGR 434
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+ ++ ++++SG PD +TYNT S
Sbjct: 435 MRDASRVLSEMRESGPAPDIITYNTFIAS 463
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 42/80 (52%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y++ + K G A++I+ + +E K N+ N ++ GKF +K
Sbjct: 101 KPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMK 160
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F+ IK +PD VT+NT+
Sbjct: 161 VFEDIKTFQCSPDIVTWNTL 180
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G K +I ++++ IK G G + ++++ I ++ N +LS +NG
Sbjct: 130 MRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGM 189
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+F ++K++G P+ T+NT+ S
Sbjct: 190 DSEVSGVFKEMKRAGFVPERDTFNTLISS 218
Score = 38.1 bits (87), Expect = 0.73, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 36/58 (62%)
Query: 28 ALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
ALE+ N + ++ K +VF +LS + GK ++++++F++++ G P+ T+N +
Sbjct: 88 ALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNAL 145
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + L K GN A ++ + +++ + + N+ ++CL GKF + ++
Sbjct: 539 NYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEM 598
Query: 71 KQSGLTPDAVTYNTV 85
+ +GL PD TYNT+
Sbjct: 599 RNTGLEPDQATYNTM 613
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 15 YIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSG 74
+ KF G+ AL++Y + E + N F+ + +++ L +NG E + LF + + G
Sbjct: 477 FFKFQGQEA----ALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERG 532
Query: 75 LTPDAVTYNTV 85
L D V Y T+
Sbjct: 533 LLLDHVNYTTL 543
>gi|298705285|emb|CBJ48975.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 674
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESD-KVNVFICNLILSCLVRNGKFESSLKL 66
++ SY++ I +A I+ +T E + NVF ++S + G +E S+
Sbjct: 108 NVVSYNNVITACANAKKQKRAEGIFREMTKERGIRPNVFTYGALISACAKRGNWEDSVNY 167
Query: 67 FDKIKQSGLTPDAVTYNTV 85
++++QSGL P+AV Y+TV
Sbjct: 168 LEQMRQSGLAPNAVIYSTV 186
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 40/80 (50%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ ++ +Y + I K GN ++ + N I + ++S R+ +++ ++K
Sbjct: 142 RPNVFTYGALISACAKRGNWEDSVNYLEQMRQSGLAPNAVIYSTVISACERSDQWQKAVK 201
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L +++ G+ P VTYNTV
Sbjct: 202 LLRTMRRDGILPVTVTYNTV 221
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +YSS I + G A ++N + DE NV N+++ L + GK E + L
Sbjct: 273 VVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLK 332
Query: 69 KIKQSGLTPDAVTYNTV 85
+ Q G +PD TYNT+
Sbjct: 333 LMIQRGESPDTFTYNTL 349
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G +T SY+ I K+G ++A ++Y + + V N +L+ L R GK
Sbjct: 369 MESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGK 428
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ LF ++K LTP++ TYN +
Sbjct: 429 VRDAWNLFGEMKVHDLTPESCTYNIL 454
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ H T S +Y+ + L KN + +A+E+++ + + + ++ I N ++ L + K
Sbjct: 439 MKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARK 498
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E + +LF+++ GL P+ +TY +
Sbjct: 499 IEIARELFNRLSHEGLEPNVITYTVM 524
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 44/80 (55%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ SI ++ I L K A E++N ++ E + NV +++ L ++G+ E++
Sbjct: 480 QPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKD 539
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LF +++ G P+ VT+NT+
Sbjct: 540 LFLGMEEKGCAPNLVTFNTL 559
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFI-CNLILSC-----LVRNGK 59
+ ++ +Y + + L GN++ A++++ + + + V I NL+ C L ++G
Sbjct: 194 RPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGL 253
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +LF ++K G++PD V Y+++
Sbjct: 254 IDKGKELFLEMKGRGISPDVVAYSSI 279
>gi|255660952|gb|ACU25645.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 376
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ G +YS+ I L K N +AL + N + K NV + N +++ L KFE
Sbjct: 122 QKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFE 181
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
++++F ++ P +TYNT+
Sbjct: 182 DAIRVFREMGTMHCPPTIITYNTL 205
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 45/81 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+ +YS +K L + +AL+++N +T + K +V + N+++ L GK + +L L+
Sbjct: 233 GVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLY 292
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
+ + P+ V++NT+ +
Sbjct: 293 FDMNRWKCAPNLVSHNTLMEG 313
>gi|63054641|ref|NP_594649.2| mitochondrial PPR repeat protein Ppr5 [Schizosaccharomyces pombe
972h-]
gi|19862963|sp|Q10451.2|PPR5_SCHPO RecName: Full=Pentatricopeptide repeat-containing protein 5,
mitochondrial; Flags: Precursor
gi|159884021|emb|CAA94707.2| mitochondrial PPR repeat protein Ppr5 [Schizosaccharomyces pombe]
Length = 1261
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%)
Query: 20 GKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDA 79
G ++ AL I+ + K +VF+ N +LS L R + KLF ++K+SGL P +
Sbjct: 902 GDTDDATTALNIFEETKRHNVKPSVFLYNAVLSKLGRARRTTECWKLFQEMKESGLLPTS 961
Query: 80 VTYNTV 85
VTY TV
Sbjct: 962 VTYGTV 967
>gi|255660986|gb|ACU25662.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 376
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 45/84 (53%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ G +YS+ I L K N +A+ + N + K N + N +++ LV KFE
Sbjct: 122 QKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFE 181
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
++++F ++ +P+ +TYNT+
Sbjct: 182 DAIRVFREMGTMHCSPNIITYNTL 205
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 45/81 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+ +YS +K L + KAL+++N +T + K +V + N+++ L GK + +L L+
Sbjct: 233 GVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNVLIHGLCSVGKMQLALSLY 292
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
+ + P+ V++NT+ +
Sbjct: 293 FDMNRWKCAPNLVSHNTLMEG 313
>gi|255660974|gb|ACU25656.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 372
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 45/84 (53%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ G +YS+ I L K N +A+ + N + K NV + N +++ LV KFE
Sbjct: 121 QKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFE 180
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
++++F ++ +P +TYNT+
Sbjct: 181 DAIRVFREMGTMHCSPTIITYNTL 204
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 44/79 (55%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +YS +K L + +AL ++N +T + K +V + N+++ L GK + +L L+
Sbjct: 233 VITYSMLMKGLCLDHRVERALXLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYF 292
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
+ + P+ V++NT+ +
Sbjct: 293 DMNRWKCAPNLVSHNTLME 311
>gi|255660978|gb|ACU25658.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 373
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 45/84 (53%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ G +YS+ I L K N +A+ + N + K NV + N +++ LV KFE
Sbjct: 122 QKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFE 181
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
++++F ++ +P +TYNT+
Sbjct: 182 DAIRVFREMGTMHCSPTIITYNTL 205
>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
Length = 535
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 41/80 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y I K G+ A + + + K N +I +I+ V++ + E +L+
Sbjct: 313 KPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALE 372
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L+ +I + G+ P VTYNTV
Sbjct: 373 LYQRILKDGILPSTVTYNTV 392
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 41/80 (51%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
SI +YS I LGK G +A ++ + D + F ++ L GK +++L
Sbjct: 422 SIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELL 481
Query: 68 DKIKQSGLTPDAVTYNTVYQ 87
+++ ++G+ PD TY T+ Q
Sbjct: 482 EEMLKAGIFPDDHTYGTLVQ 501
>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
Length = 603
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 41/80 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y I K G+ A + + + K N +I +I+ V++ + E +L+
Sbjct: 370 KPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALE 429
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L+ +I + G+ P VTYNTV
Sbjct: 430 LYQRILKDGILPSTVTYNTV 449
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 41/80 (51%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
SI +YS I LGK G +A ++ + D + F ++ L GK +++L
Sbjct: 479 SIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELL 538
Query: 68 DKIKQSGLTPDAVTYNTVYQ 87
+++ ++G+ PD TY T+ Q
Sbjct: 539 EEMLKAGIFPDDHTYGTLVQ 558
>gi|302141714|emb|CBI18917.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 48/83 (57%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ ++ +YS I L ++G +A ++++ + D N N ++ V+ G+ E L+
Sbjct: 247 QPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQ 306
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
+++++K+ G PDA+TYN + +S
Sbjct: 307 VYNQMKRLGCPPDAITYNFLIES 329
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 39/74 (52%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+S + + GN +A ++ + + NV+ ++++ L R+G+ + +F ++
Sbjct: 218 YTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMI 277
Query: 72 QSGLTPDAVTYNTV 85
G P+A+T+N +
Sbjct: 278 DVGCDPNAITFNNL 291
Score = 34.3 bits (77), Expect = 9.8, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I+ ++ N +A++I NS+ + +N N I C+ + G S+ ++F K+
Sbjct: 322 TYNFLIESHCRDDNLEEAVKILNSVKKGCN-LNASSFNPIFGCISKLGDVNSAHRMFAKM 380
Query: 71 KQSGLTPDAVTYNTV 85
K P+ VTYN +
Sbjct: 381 KDLKCRPNTVTYNIL 395
>gi|356549954|ref|XP_003543355.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11900-like [Glycine max]
Length = 366
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 1 MQQHGKTSISSYSSYIK----FLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVR 56
+++ + + SS SS+I K G K+L I++ + + +++ N++L L R
Sbjct: 163 LEEISEITCSSTSSFINKIIFAFAKCGQRDKSLVIFDHLKRQGYGLDLVTYNIVLDILGR 222
Query: 57 NGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
G+ + L +F IK +G PD V+YNT+
Sbjct: 223 TGRVDEMLDVFASIKDTGFVPDTVSYNTL 251
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 40/77 (51%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ + LG+ G + L+++ SI D + N +++ L + G+F+ F ++
Sbjct: 212 TYNIVLDILGRTGRVDEMLDVFASIKDTGFVPDTVSYNTLINGLRKAGRFDMCFVYFKEM 271
Query: 71 KQSGLTPDAVTYNTVYQ 87
+ G+ PD +TY + +
Sbjct: 272 TEKGVEPDLLTYTAIIE 288
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 45/75 (60%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I L K G + +A+E+ + + + K +V + +++ L R GK E ++K F +
Sbjct: 228 TYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDV 287
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ P+A TYN++
Sbjct: 288 EGFGVKPNAFTYNSI 302
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 44/77 (57%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y++ + L K+G A+E+ N ++ + + N ++ L + GK + +++L
Sbjct: 191 IVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLH 250
Query: 69 KIKQSGLTPDAVTYNTV 85
+++ GL PD +TY+++
Sbjct: 251 EMRGKGLKPDVITYSSL 267
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 41/80 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y+ + + K G +A++ NS+ + NV N+IL + G++ + K
Sbjct: 48 KPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEK 107
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L ++ + G +P VT+N +
Sbjct: 108 LLTEMVRKGCSPSVVTFNIL 127
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M HG T S SY+ + K +A++ + ++ N +L+ L ++GK
Sbjct: 147 MPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGK 206
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+++++L +++ G +P +TYNTV
Sbjct: 207 VDAAVELLNQLSSKGCSPVLITYNTV 232
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ++G K ++ SY S + KNG +A+ I + + + N + N I+ V +G
Sbjct: 334 MQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGP 393
Query: 60 FESSLKLFDKIKQSGLTPDAVTYN 83
+ + L +K+K +G++P VTYN
Sbjct: 394 NDQAFILVEKMKSNGISPSIVTYN 417
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY+ I + + G A+E+++ +T+ + N N ++ ++ G E+ +L D++
Sbjct: 65 SYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQM 124
Query: 71 KQSGLTPDAVTYNTV 85
GL P+A+TYN +
Sbjct: 125 VCHGLKPNAITYNVL 139
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS L +NG+S L ++ + + C+++L+ L ++GK + ++ +
Sbjct: 170 TYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSL 229
Query: 71 KQSGLTPDAVTYNTV 85
+GL P V YNT+
Sbjct: 230 VNAGLVPTRVIYNTL 244
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ +G ++ ++++ I G+ G K + + + + K NV I++ +NGK
Sbjct: 299 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 358
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
++ + D + + P+A YN +
Sbjct: 359 IPEAVAILDDMFHKDVLPNAQVYNAI 384
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 47/75 (62%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I L KNG + E+Y + ++ N++ N +++ L ++G+ + + ++FD++
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294
Query: 71 KQSGLTPDAVTYNTV 85
++ G++ + VTYNT+
Sbjct: 295 RERGVSCNIVTYNTL 309
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 MQQHGK-TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G ++ +Y+ + L K+G + A ++++ + + N+ N ++ L R K
Sbjct: 259 MQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ K+ D++K G+ P+ +TYNT+
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTL 344
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 41/74 (55%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ I L ++G KA + + +T+ + NV N++++ + + G +L L +
Sbjct: 202 YTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMS 261
Query: 72 QSGLTPDAVTYNTV 85
+ G+ PD VTYNT+
Sbjct: 262 EKGVQPDVVTYNTL 275
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 46/80 (57%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + +++S I L K G +AL++ + + + N+ NL++ L+R K + +++
Sbjct: 303 RPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAME 362
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L D++ SGL PD+ TY+ +
Sbjct: 363 LMDEMASSGLQPDSFTYSIL 382
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ G + + +Y + I+ L + A+E+ N + + + NV + + +L + G+
Sbjct: 120 MQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGR 179
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+ES K+F+++ G+ PD V Y + S
Sbjct: 180 WESVGKVFEEMSGRGIEPDVVMYTALIDS 208
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 38/77 (49%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
YS + K G +++ ++ + +V + ++ L R+GK + + ++ D +
Sbjct: 167 YSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMT 226
Query: 72 QSGLTPDAVTYNTVYQS 88
+ GL P+ VTYN + S
Sbjct: 227 ERGLEPNVVTYNVLINS 243
>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
Length = 455
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 47/83 (56%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K I +Y++ + L K+ +A +++ S+ + ++N+ +++ L++ G+ E ++
Sbjct: 272 KWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMD 331
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
LF I +GL PD VTY V ++
Sbjct: 332 LFAAIPANGLVPDVVTYRVVAEN 354
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
N I N+ S + G + ++ +F+K++Q GL+PDAV+Y +
Sbjct: 29 NHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGAL 71
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 41 KVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
K N F N +L + G+ +S+ LF K+ +G+TP VTYNT+
Sbjct: 202 KPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTI 246
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
K E++ + + N+ N IL L + G+ +L D I+ G+ PD ++YNT+
Sbjct: 118 KVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTL 176
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M G T + +Y++ + L K G S + +EI+ ++ ++ N+ N+I+ L + K
Sbjct: 461 MWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKK 520
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVY 86
++ L ++K GL PD V++ T++
Sbjct: 521 VNEAVDLLGEMKSKGLKPDVVSFGTLF 547
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 41/80 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ SI Y++ IK L + G L AL++ N + + N++ NL+++ L + G +
Sbjct: 362 RPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASH 421
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L D G PD TYNT+
Sbjct: 422 LVDDAIAKGCPPDIFTYNTL 441
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y++ I K A E+ N + + +V N +L+ L + GK E +++F
Sbjct: 435 IFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFK 494
Query: 69 KIKQSGLTPDAVTYNTVYQS 88
+++ G TP+ +TYN + S
Sbjct: 495 AMEEKGCTPNIITYNIIVDS 514
>gi|255552099|ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543729|gb|EEF45257.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 549
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ K ++ +Y+ ++ LGK KALE+Y + + + ++ L ++G+
Sbjct: 330 MQEKSCKPNVITYTIFMHALGKAKQVNKALEVYEMMKSNCCVPDASFYSSLIFVLTQSGR 389
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+ + +F+ +K+ G++PD +TYNT+ S
Sbjct: 390 LKDAWDVFEDMKKQGVSPDLLTYNTMITS 418
>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
Length = 770
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I+F K +A+++ + + K ++F N L GK E L L D++
Sbjct: 499 TYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQM 558
Query: 71 KQSGLTPDAVTYNTV 85
K GL PD VTY T+
Sbjct: 559 KSEGLKPDIVTYGTI 573
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 36/74 (48%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I+ K G +A+ + + + N ++ + G E + KLFD++
Sbjct: 675 YTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMV 734
Query: 72 QSGLTPDAVTYNTV 85
SG+ PD V+YNT+
Sbjct: 735 SSGIVPDTVSYNTL 748
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G K I +Y + I K + KA + + + N I N ++ RNG
Sbjct: 558 MKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGS 617
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
++ + D +K +G+ P +TYN++
Sbjct: 618 ISDAIGVLDTMKHNGIQPTPITYNSL 643
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 39/74 (52%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I + + G+ +AL +++ + + K V NLI L + G+ E + ++ D++
Sbjct: 324 YNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEML 383
Query: 72 QSGLTPDAVTYNTV 85
+G+T +N+V
Sbjct: 384 LAGMTVHCSLFNSV 397
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 42/81 (51%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I++ ++ I L + N +A ++ ++ D + + N+++ + K E +++L
Sbjct: 461 NIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLR 520
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
D + + G PD T+NT ++
Sbjct: 521 DDMIKRGFKPDLFTFNTFLRA 541
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 42/82 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ SY+S I G +A +Y+ +T + N + ++S L R + + +
Sbjct: 468 KPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFR 527
Query: 66 LFDKIKQSGLTPDAVTYNTVYQ 87
LFD++ + + P+ VTYN + +
Sbjct: 528 LFDEMLEQNMMPNEVTYNVMIE 549
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 45/79 (56%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++ SS ++ L + G + A ++ N + ++F+ N +++ L ++GKF+ + LF +
Sbjct: 332 AALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKE 391
Query: 70 IKQSGLTPDAVTYNTVYQS 88
+ + GL + VTY+ + S
Sbjct: 392 MGEKGLCANDVTYSILIDS 410
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y ++ L + G+ KA++++N + + N N+++ + G+ E + KL D++
Sbjct: 753 TYCCFLDHLAREGSMEKAVQLHNDML-KGLLANTVSYNILVRGFCKLGRVEEATKLLDEM 811
Query: 71 KQSGLTPDAVTYNT-VYQ 87
+ + PD +TY+T +YQ
Sbjct: 812 IDNAIFPDCITYSTIIYQ 829
>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 472
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 44/78 (56%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +YSS + L K+G SL+A+E++ + + N+ +++ L + K + +++L
Sbjct: 261 NVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELL 320
Query: 68 DKIKQSGLTPDAVTYNTV 85
D++ GL PDA Y V
Sbjct: 321 DRMNLQGLKPDAGLYGKV 338
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 42/78 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+S I L + N +A+ + + + NVF + ++ L ++G+ +++LF
Sbjct: 226 TVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELF 285
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ + G P+ VTY T+
Sbjct: 286 EMMMARGCRPNMVTYTTL 303
>gi|297844848|ref|XP_002890305.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336147|gb|EFH66564.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 860
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 43/77 (55%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS I LGK G+ A +++ + D+ N+ N+++ + ++S+LKL+ +
Sbjct: 471 TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRDM 530
Query: 71 KQSGLTPDAVTYNTVYQ 87
+ +G PD VTY+ V +
Sbjct: 531 QNAGFEPDKVTYSIVME 547
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G K +Y + I K G A+++Y + + F ++I++CL + G
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 60 FESSLKLFDKIKQSGLTPDAVTYN 83
++ KLF ++ G TP+ VTYN
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYN 508
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 31/71 (43%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y + GK GN KA + Y ++ NV CN +LS +R K + +L +
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Query: 72 QSGLTPDAVTY 82
GL P TY
Sbjct: 637 ALGLRPSLQTY 647
>gi|255660996|gb|ACU25667.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 376
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ G +YS+ I L K N KA+ + N + K N + N +++ LV KFE
Sbjct: 122 QKGGVLDAFAYSAMINGLCKEANLDKAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFE 181
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
++++F ++ +P +TYNT+
Sbjct: 182 DAIRVFREMGTMHCSPTIITYNTL 205
>gi|302795973|ref|XP_002979749.1| hypothetical protein SELMODRAFT_111428 [Selaginella moellendorffii]
gi|300152509|gb|EFJ19151.1| hypothetical protein SELMODRAFT_111428 [Selaginella moellendorffii]
Length = 388
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 43/79 (54%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
+ + SY+ + L G++ KA EI+N + D + N++L L + + E +L L
Sbjct: 253 SDVKSYTKLLNALCDRGSAQKACEIFNLMVDRGYAPTLVSYNVLLKGLCKALRVEHALVL 312
Query: 67 FDKIKQSGLTPDAVTYNTV 85
F ++++ + PD V+Y TV
Sbjct: 313 FREMQEREIQPDVVSYTTV 331
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQSDH 90
NV I N +++ R G + +L ++++G PD VTYNT+ H
Sbjct: 10 NVVIFNSVVNGFARAGHLDGALGTLRMMRKAGCNPDEVTYNTLIDVFH 57
>gi|302813417|ref|XP_002988394.1| hypothetical protein SELMODRAFT_128001 [Selaginella moellendorffii]
gi|300143796|gb|EFJ10484.1| hypothetical protein SELMODRAFT_128001 [Selaginella moellendorffii]
Length = 388
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 43/79 (54%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
+ + SY+ + L G++ KA EI+N + D + N++L L + + E +L L
Sbjct: 253 SDVKSYTKLLNALCDRGSAQKACEIFNLMVDRGYAPTLVSYNVLLKGLCKALRVEHALVL 312
Query: 67 FDKIKQSGLTPDAVTYNTV 85
F ++++ + PD V+Y TV
Sbjct: 313 FREMQEREIQPDVVSYTTV 331
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQSDH 90
NV I N +++ R G + +L ++++G PD VTYNT+ H
Sbjct: 10 NVVIFNSVVNGFARAGHLDGALGTLRMMRKAGCDPDEVTYNTLIDVFH 57
>gi|296081308|emb|CBI17752.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLK-ALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G I S + + + G LK ALE++ + + ++ I N+++ + R G+
Sbjct: 458 MQKLGFPVIDDLSKFFSVMIEKGERLKLALEVFEHLKAKG-YCSISIYNILMEAIHRTGE 516
Query: 60 FESSLKLFDKIKQSGLTPDAVTYN 83
+ +L LFD IK S PD+ TY+
Sbjct: 517 VKKALSLFDDIKDSNFKPDSSTYS 540
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 31/57 (54%)
Query: 26 LKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTY 82
L+ +Y + K VF+ N I+ LV+ G + ++ +++ K+ GL ++VTY
Sbjct: 204 LRVYYVYEKMKKFGIKPRVFLYNRIMDGLVKTGHLDLAMSVYEDFKEDGLVEESVTY 260
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y +K L K G + LE+ + + K +VF ++ LV G + L++++++
Sbjct: 259 TYMILVKGLCKAGRIDEVLELLDRMRGNLCKPDVFAYTAMVKVLVAEGNLDGCLRVWEEM 318
Query: 71 KQSGLTPDAVTYNTV 85
++ + PD + Y T+
Sbjct: 319 RKDKVEPDVMAYTTL 333
>gi|242034189|ref|XP_002464489.1| hypothetical protein SORBIDRAFT_01g019340 [Sorghum bicolor]
gi|241918343|gb|EER91487.1| hypothetical protein SORBIDRAFT_01g019340 [Sorghum bicolor]
Length = 585
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 45/77 (58%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y++ + + K G +AL I++SI + +V N ++ L + G+ +++ LFD
Sbjct: 403 IVTYNTLLNAISKRGMVEEALGIFHSIRENGCQVVRITYNTLIDALAKKGEVINAMTLFD 462
Query: 69 KIKQSGLTPDAVTYNTV 85
++ G++PD VTY ++
Sbjct: 463 EMTVDGISPDDVTYGSL 479
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 46/84 (54%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q + K +++Y+ +I + + G +A+++ + +E ++ N +L+ + + G E
Sbjct: 361 QANHKPDVTAYNIFINYFCRYGYLDQAIDVLEVMVNEKCFPDIVTYNTLLNAISKRGMVE 420
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
+L +F I+++G +TYNT+
Sbjct: 421 EALGIFHSIRENGCQVVRITYNTL 444
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 38/70 (54%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGL 75
I+ L + G + KA + + + CN++++ L G+ S++K+ + ++ +G
Sbjct: 165 IRGLVRTGKTNKARHVLEVMVLSGGVPDTITCNMLIARLCCEGQLSSAMKVLEDMRFTGC 224
Query: 76 TPDAVTYNTV 85
+P +T+NT+
Sbjct: 225 SPSGITFNTL 234
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 46/75 (61%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I L KNG + E+Y + ++ N++ N +++ ++G+ + + KLFD++
Sbjct: 235 TYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEM 294
Query: 71 KQSGLTPDAVTYNTV 85
++ G++ + VTYNT+
Sbjct: 295 RERGVSCNIVTYNTL 309
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHGK-TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G ++ +Y+ + K+G + A ++++ + + N+ N ++ L R K
Sbjct: 259 MQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ K+ D++K G+ P+ +TYNT+
Sbjct: 319 ANEANKVMDQMKSDGINPNLITYNTL 344
>gi|255660928|gb|ACU25633.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 481
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G + +I SY + K + + G + + +N + +E + N+++ +GK
Sbjct: 106 MEELGVERTIKSYDALFKVISRRGRYMMSKRYFNKMVNEGIEPTRHTFNVLIWGFFLSGK 165
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E++ + F+ +K +TPD VTYNT+
Sbjct: 166 VETANRFFEDLKSREITPDVVTYNTM 191
>gi|255660972|gb|ACU25655.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 376
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 45/84 (53%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ G +YS+ I L K N +A+ + N + K NV + N +++ LV KFE
Sbjct: 122 QKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFE 181
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
++++F ++ +P +TYNT+
Sbjct: 182 DAIRVFREMGTMHCSPTIITYNTL 205
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 44/79 (55%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +YS +K L + +AL ++N +T + K +V + N+++ L GK + +L L+
Sbjct: 234 VITYSMLMKGLCLDHRVERALXLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYF 293
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
+ + P+ V++NT+ +
Sbjct: 294 DMNRWKCAPNLVSHNTLME 312
>gi|15219409|ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79540
gi|4835755|gb|AAD30222.1|AC007202_4 Contains similarity to gi|2827663 F18F4.190 membrane-associated
salt-inducible-like protein from Arabidopsis thaliana
BAC gb|AL021637 [Arabidopsis thaliana]
gi|332198140|gb|AEE36261.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 780
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 43/80 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ YSS I L + +A E+Y ++ ++ K ++ + +++ L + GK E +LKL
Sbjct: 303 LRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLS 362
Query: 69 KIKQSGLTPDAVTYNTVYQS 88
+ G++PD YN V ++
Sbjct: 363 SMPSKGISPDTYCYNAVIKA 382
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 38/70 (54%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
++G+ LKA D ++ N++++ R G + +LKL + ++ GL+PD+V
Sbjct: 494 ESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSV 553
Query: 81 TYNTVYQSDH 90
TYNT+ H
Sbjct: 554 TYNTLINGLH 563
>gi|413953459|gb|AFW86108.1| hypothetical protein ZEAMMB73_051838 [Zea mays]
Length = 388
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+HG I+SY+ + L K G +A+E+ +++ + +V N +L L G
Sbjct: 142 MQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVSPDVVSYNTVLGALSHAGM 201
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
FE + KL ++ G D +TY+++ ++
Sbjct: 202 FEEASKLMKEMNTLGFEYDLITYSSILEA 230
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 41/81 (50%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
G +S Y+ IK LGK G A+ +++ + +V+ N ++S L R G + +L
Sbjct: 77 GSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMIDEAL 136
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
++++ G PD +YN +
Sbjct: 137 STMRRMQEHGCIPDINSYNII 157
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ + L + G +AL + + ++ N+IL+ L + G ++++
Sbjct: 116 VYAYNALMSGLARTGMIDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLS 175
Query: 69 KIKQSGLTPDAVTYNTV 85
+KQS ++PD V+YNTV
Sbjct: 176 NMKQSTVSPDVVSYNTV 192
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 38/76 (50%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y S I LGK A E++ + + + + +++ L + G+ + ++ +FD+
Sbjct: 47 AAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDE 106
Query: 70 IKQSGLTPDAVTYNTV 85
+ + G PD YN +
Sbjct: 107 MNKLGCAPDVYAYNAL 122
>gi|326532582|dbj|BAK05220.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 697
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G K S+ +Y++ + + GN+ K +E + S+TDE +++L L ++G
Sbjct: 510 MKREGLKPSLETYTALLDIFRRAGNTEKLMETWKSMTDEKVGCTRVTFHMVLDGLAKHGL 569
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
F + + + + GL P A+TYN + +
Sbjct: 570 FVQARDVICEFGKIGLPPTAMTYNILMNA 598
>gi|326511196|dbj|BAJ87612.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 725
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G K S+ +Y++ + + GN+ K +E + S+TDE +++L L ++G
Sbjct: 510 MKREGLKPSLETYTALLDIFRRAGNTEKLMETWKSMTDEKVGCTRVTFHMVLDGLAKHGL 569
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
F + + + + GL P A+TYN + +
Sbjct: 570 FVQARDVICEFGKIGLPPTAMTYNILMNA 598
>gi|297836334|ref|XP_002886049.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331889|gb|EFH62308.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 755
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S +++ I L K G+ +A ++ + D K +V C+ +L R + E ++ LF
Sbjct: 614 SALAFTDVIGGLSKRGDFQEAFILWFYMADLRVKPDVVTCSALLHGYCRAQRMEKAIVLF 673
Query: 68 DKIKQSGLTPDAVTYNTV 85
DK+ +GL PD V YNT+
Sbjct: 674 DKLLDAGLKPDVVLYNTL 691
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 41/78 (52%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ S+Y+ I L + +ALE+ + D +V+V + ++ L R G+ E +L
Sbjct: 173 RPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALA 232
Query: 66 LFDKIKQSGLTPDAVTYN 83
L D++K S L PD V YN
Sbjct: 233 LVDEVKGSCLEPDIVLYN 250
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ G + S+ +++ ++ L + G AL + + + + ++ + N+ + C + G
Sbjct: 202 MQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGS 261
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + K F ++K GL PD V+Y ++
Sbjct: 262 VDMAWKFFHELKAHGLRPDDVSYTSM 287
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ S++S + LGK +AL +++ + ++ K N+ N+I+ L G+ + K+
Sbjct: 350 SVVSFNSILTCLGKKRKVDEALTLFDVMKKDA-KPNISTYNIIIDMLCMAGRVNEAYKIR 408
Query: 68 DKIKQSGLTPDAVTYN 83
D+++ +GL P+ ++ N
Sbjct: 409 DEMELAGLFPNLLSVN 424
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 35/74 (47%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+S I+ +G +IY + + ++ + N + C+ + G+ E +F+ +K
Sbjct: 493 YTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMK 552
Query: 72 QSGLTPDAVTYNTV 85
G PD +Y+ +
Sbjct: 553 SFGFLPDVRSYSIL 566
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 36/74 (48%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
YSS I GK G +A I + + NV+ N ++ LV+ + + +L F +K
Sbjct: 668 YSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMK 727
Query: 72 QSGLTPDAVTYNTV 85
+ +P+ TY+ +
Sbjct: 728 EMKCSPNTYTYSIL 741
>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1071
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 48/75 (64%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I+++++ + +N + ++AL++ +++ K++V N+++S L +G S+LKL+
Sbjct: 939 TIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLY 998
Query: 68 DKIKQSGLTPDAVTY 82
+IKQ GL P+ TY
Sbjct: 999 KEIKQRGLWPNMTTY 1013
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 37/75 (49%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
++ I G +GN LKA +++ + + F +L L R GKF+ + +L DK+
Sbjct: 520 TFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKL 579
Query: 71 KQSGLTPDAVTYNTV 85
D VTYNT+
Sbjct: 580 HYIPSAVDTVTYNTI 594
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 43/74 (58%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ I K G+ ++A ++Y +++ N FICN+++S L ++GK + F +
Sbjct: 451 YTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMS 510
Query: 72 QSGLTPDAVTYNTV 85
+ G P+++T++ +
Sbjct: 511 KIGNVPNSITFDCI 524
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G S+ +Y++ + + K G ALE+ + + + + + N+++ L +N +
Sbjct: 194 MEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNR 253
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
L K+++ ++P+ +TYN++
Sbjct: 254 SAKGYLLLKKMRKRMISPNEITYNSI 279
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 40/77 (51%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+S+++ I L G KA + + + +V N +L+ + G+++++L+L D
Sbjct: 168 VSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELID 227
Query: 69 KIKQSGLTPDAVTYNTV 85
++ G+ DA TYN +
Sbjct: 228 QMGSKGIEADACTYNML 244
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 54 LVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
L RNG S+KL DK+ + G+ PD VT++ +
Sbjct: 388 LCRNGLLNESVKLLDKMLKDGVVPDVVTFSVL 419
Score = 34.3 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 35/75 (46%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ + L KN S K + + N N I++ V+ GK ++ ++F ++
Sbjct: 240 TYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEM 299
Query: 71 KQSGLTPDAVTYNTV 85
L P+ VTYN +
Sbjct: 300 SMLNLLPNCVTYNAL 314
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 41/74 (55%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +YS+ I L NG ALE++N + N+ + ++ L + G+ E + ++F
Sbjct: 610 VVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFS 669
Query: 69 KIKQSGLTPDAVTY 82
++K+ GL PD VTY
Sbjct: 670 ELKKQGLIPDEVTY 683
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 39/74 (52%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+S I L K+GN A I N + K + F ++ RN +S+ ++F+++
Sbjct: 231 YNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMD 290
Query: 72 QSGLTPDAVTYNTV 85
+ G P+A TY+T+
Sbjct: 291 EEGCEPNAATYSTL 304
Score = 41.2 bits (95), Expect = 0.069, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 45/84 (53%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ K + +Y++ + L K + ++ Y+ I E + N+ I N +++ L ++G
Sbjct: 186 QRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVR 245
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
+ + +K+ +SG+ PD TY ++
Sbjct: 246 DAESIINKVFKSGMKPDTFTYTSM 269
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G + ++ +Y+ I L K N A E+ + +E +V + +++ L NG
Sbjct: 566 MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGA 625
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+L++F+K+ + G P+ TY+++ Q+
Sbjct: 626 IPLALEMFNKMVKHGCLPNLHTYSSLIQA 654
>gi|356527892|ref|XP_003532540.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g01390-like [Glycine max]
Length = 545
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 43/80 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ SY++YIK L N +A +Y + N +++ L+ +GK + +L++F
Sbjct: 159 TVVSYTAYIKILFHNRRLKEATRVYKEMISSGVAPNCHTYTVLMDYLIASGKCKEALEIF 218
Query: 68 DKIKQSGLTPDAVTYNTVYQ 87
+K++++G PD N + Q
Sbjct: 219 EKMQEAGAQPDKAACNILIQ 238
>gi|302821471|ref|XP_002992398.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
gi|300139814|gb|EFJ06548.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
Length = 698
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 47/81 (58%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S ++YS+ + G + L + ++ E+ ++N+ + NL+++ G+ + + +F
Sbjct: 561 SPTAYSALANAYAQLGMCEQTLHVLQTMEKENIEINLAMLNLLINAFSMAGRSQEAFAVF 620
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
+ IK++GLT D +TY T+ ++
Sbjct: 621 EYIKEAGLTADKITYTTLMKA 641
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 33/58 (56%)
Query: 31 IYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+Y + D + N ++ +++ G+++ +KL +++Q+G+TPDA YN + +
Sbjct: 374 LYQEMRDCDIRPNTYMYARMITIYRDTGQWQKGVKLLREMQQAGVTPDAHVYNVIINT 431
>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 44/78 (56%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +YSS + L K+G SL+A+E++ + + N+ +++ L + K + +++L
Sbjct: 261 NVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELL 320
Query: 68 DKIKQSGLTPDAVTYNTV 85
D++ GL PDA Y V
Sbjct: 321 DRMNLQGLKPDAGLYGKV 338
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 42/78 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+S I L + N +A+ + + + NVF + ++ L ++G+ +++LF
Sbjct: 226 TVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELF 285
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ + G P+ VTY T+
Sbjct: 286 EMMMARGCRPNMVTYTTL 303
>gi|115480461|ref|NP_001063824.1| Os09g0542800 [Oryza sativa Japonica Group]
gi|32526676|dbj|BAC79199.1| chloroplast RNA processing 1 -like protein [Oryza sativa Japonica
Group]
gi|113632057|dbj|BAF25738.1| Os09g0542800 [Oryza sativa Japonica Group]
gi|125606498|gb|EAZ45534.1| hypothetical protein OsJ_30195 [Oryza sativa Japonica Group]
gi|215768653|dbj|BAH00882.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 543
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQQ G T ++ +Y++ I + + G +A E+ + D N N I+ V+ G+
Sbjct: 275 MQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIMRAHVKAGR 334
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
E L++ ++++Q G PD +TYN + ++
Sbjct: 335 SEQVLQVHNQMRQLGCEPDIITYNFLMET 363
>gi|255660968|gb|ACU25653.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 376
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 45/84 (53%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ G +YS+ I L K N +A+ + N + K NV + N +++ LV KFE
Sbjct: 122 QKGGVLGAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFE 181
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
++++F ++ +P +TYNT+
Sbjct: 182 DAIRVFREMGTMHCSPTIITYNTL 205
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 45/79 (56%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +YS ++ L + +AL+++N +T + K +V + N+++ L GK E +L L+
Sbjct: 234 VITYSMLMEGLCFDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMELALSLYF 293
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
+ + P+ V++NT+ +
Sbjct: 294 DMNRWKCAPNLVSHNTLME 312
>gi|125564557|gb|EAZ09937.1| hypothetical protein OsI_32236 [Oryza sativa Indica Group]
Length = 544
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQQ G T ++ +Y++ I + + G +A E+ + D N N I+ V+ G+
Sbjct: 276 MQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIMRAHVKAGR 335
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
E L++ ++++Q G PD +TYN + ++
Sbjct: 336 SEQVLQVHNQMRQLGCEPDIITYNFLMET 364
>gi|85000739|ref|XP_955088.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65303234|emb|CAI75612.1| hypothetical protein, conserved [Theileria annulata]
Length = 559
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 1 MQQHGKTSISS--YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNG 58
M++ GK ++ Y++ IK G+N KA+ I+ + + + N N I+ R G
Sbjct: 201 MKERGKVKPNTIMYTTLIKGYGQNKQLDKAMRIFRLMQQDGVEPNTVTYNSIIDACARVG 260
Query: 59 KFESSLKLFDKIKQSGLTPDAVTYNTV 85
+ S+ +L +++ SG+ PD +T++T+
Sbjct: 261 EMGSATRLLEEMLSSGIEPDLITFSTI 287
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESD-KVNVFICNLILSCLVRNGKFESSLKLFDKIKQSG 74
IK G++G K E+ + + + +N + ++S + NG++ L ++ +K +G
Sbjct: 358 IKMYGRSGQLDKVFELADELPKRYNFSINTHVYTCLMSACITNGRYAMVLDIYKYMKING 417
Query: 75 LTPDAVTYNTVYQ 87
+ PDA T+ T+ Q
Sbjct: 418 VKPDAKTFETIIQ 430
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTS-ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G+ + + +YSS I L KNG+ +A+ ++N + D+ + N+F ++L L + G+
Sbjct: 400 MRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGR 459
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + ++F + G + TYN +
Sbjct: 460 LKDAQEVFQDLLTKGYHLNVYTYNVM 485
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 41/81 (50%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q++ I +YSS I L K+G ++ + + D +V + ++ L +NG +
Sbjct: 367 QKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLD 426
Query: 62 SSLKLFDKIKQSGLTPDAVTY 82
++ LF+K+K + P+ T+
Sbjct: 427 RAIALFNKMKDQEIRPNIFTF 447
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ I + K G++ A++ I K +V + N I+ + + + LF ++
Sbjct: 166 SYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEM 225
Query: 71 KQSGLTPDAVTYNTV 85
G++ D VTYNT+
Sbjct: 226 AVKGISADVVTYNTL 240
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 1 MQQHGK--TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNG 58
M +H K + S+Y++ I L + G S + L ++N + + +VNV + ++ R G
Sbjct: 51 MMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREG 110
Query: 59 KFESSLKLFDKIKQSGLTPDAVTYN 83
+ +++L L D++K + D V YN
Sbjct: 111 RVDAALSLLDEMKSNTFDADIVLYN 135
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +Y+ + LGK G + KAL I+ + ++ N+ N+I+ L + G E++ K+
Sbjct: 235 SVVAYNCILTCLGKKGKTDKALRIFEEMKRDA-MPNLPTYNIIIGMLCKAGNVEAAFKVR 293
Query: 68 DKIKQSGLTPDAVTYN 83
D +K++GL P+ T N
Sbjct: 294 DAMKEAGLFPNVRTIN 309
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G + ++ ++ I+ + G AL + + + + ++ + N+ + C + GK
Sbjct: 87 MQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGK 146
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + K F ++K +GL PD VTY ++
Sbjct: 147 VDMAWKFFHEMKANGLVPDDVTYTSM 172
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SYS I L K G + + E+Y ++ D+ ++ N ++ ++GK + +L +++
Sbjct: 447 SYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEM 506
Query: 71 KQSGLTPDAVTYNTV 85
K G P VTY +V
Sbjct: 507 KTMGHHPTVVTYGSV 521
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 36/75 (48%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
+++ S I LGK G A IY + D NV + ++ + + E K++ +
Sbjct: 341 ATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKE 400
Query: 70 IKQSGLTPDAVTYNT 84
+ +SG +PD + NT
Sbjct: 401 MMRSGCSPDLMLLNT 415
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 35/77 (45%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+S I+ K ++Y + ++ + N + C+ + G+ E LF++IK
Sbjct: 378 YTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIK 437
Query: 72 QSGLTPDAVTYNTVYQS 88
G PD +Y+ + S
Sbjct: 438 ARGFLPDTRSYSILIHS 454
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
YSS I GK G +A + + + NV+ N +L LV+ + +L F +K
Sbjct: 553 YSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMK 612
Query: 72 QSGLTPDAVTY 82
TP+ +TY
Sbjct: 613 DLKCTPNQITY 623
Score = 34.7 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Query: 48 NLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
N IL+CL + GK + +L++F+++K+ + P+ TYN +
Sbjct: 240 NCILTCLGKKGKTDKALRIFEEMKRDAM-PNLPTYNII 276
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTS-ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G+ + + +YSS I L KNG+ +A+ ++N + D+ + N+F ++L L + G+
Sbjct: 400 MRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGR 459
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + ++F + G + TYN +
Sbjct: 460 LKDAQEVFQDLLTKGYHLNVYTYNVM 485
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 41/81 (50%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q++ I +YSS I L K+G ++ + + D +V + ++ L +NG +
Sbjct: 367 QKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLD 426
Query: 62 SSLKLFDKIKQSGLTPDAVTY 82
++ LF+K+K + P+ T+
Sbjct: 427 RAIALFNKMKDQEIRPNIFTF 447
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 42/76 (55%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+S I K+G +A +++ + + + +V +++ L ++G FE + K F+++
Sbjct: 333 YTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMM 392
Query: 72 QSGLTPDAVTYNTVYQ 87
+ G P+ VTY T+ Q
Sbjct: 393 RGGCKPNVVTYTTIIQ 408
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 12 YSSYIKFLGKNGNSLKALE-IYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
YSS +K L G+ L+ ++ ++ ++ +C I+ L + G+ + + ++F ++
Sbjct: 473 YSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRM 532
Query: 71 KQSGLTPDAVTYNTV 85
G PDA TYN +
Sbjct: 533 VSEGCKPDATTYNIL 547
Score = 34.7 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 37/75 (49%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y + L K G +A E++ + + N I ++ ++G+ + + LFD++
Sbjct: 297 TYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEM 356
Query: 71 KQSGLTPDAVTYNTV 85
++G PD +T+ +
Sbjct: 357 VEAGYRPDVITHTVM 371
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 42/76 (55%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+S I K+G +A +++ + + + +V +++ L ++G FE + K F+++
Sbjct: 333 YTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMM 392
Query: 72 QSGLTPDAVTYNTVYQ 87
+ G P+ VTY T+ Q
Sbjct: 393 RGGCKPNVVTYTTIIQ 408
Score = 37.7 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 12 YSSYIKFLGKNGNSLKALE-IYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
YSS + L G+ K L+ ++ ++ ++ +C I+ L + G+ + + ++F ++
Sbjct: 473 YSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRM 532
Query: 71 KQSGLTPDAVTYNTV 85
G PDA TYN +
Sbjct: 533 VSEGCKPDATTYNIL 547
Score = 34.7 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 37/75 (49%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y + L K G +A E++ + + N I ++ ++G+ + + LFD++
Sbjct: 297 TYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEM 356
Query: 71 KQSGLTPDAVTYNTV 85
++G PD +T+ +
Sbjct: 357 VEAGYRPDVITHTVM 371
>gi|222640196|gb|EEE68328.1| hypothetical protein OsJ_26607 [Oryza sativa Japonica Group]
Length = 461
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 44/77 (57%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ SYS+ I L K G+S KA Y+ + + +V N I++ L + + ++ + +
Sbjct: 206 VVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLN 265
Query: 69 KIKQSGLTPDAVTYNTV 85
++ ++G+ PD +TYN++
Sbjct: 266 RMVKNGVMPDCITYNSI 282
Score = 34.7 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S + +G S +A+ I + + + + ++ L +NG+ + K+ D +
Sbjct: 278 TYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSM 337
Query: 71 KQSGLTPDAVTYNTV 85
+ GL P+ +TY+T+
Sbjct: 338 IKRGLKPNVITYSTL 352
>gi|115475535|ref|NP_001061364.1| Os08g0248400 [Oryza sativa Japonica Group]
gi|113623333|dbj|BAF23278.1| Os08g0248400, partial [Oryza sativa Japonica Group]
Length = 440
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 44/77 (57%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ SYS+ I L K G+S KA Y+ + + +V N I++ L + + ++ + +
Sbjct: 206 VVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLN 265
Query: 69 KIKQSGLTPDAVTYNTV 85
++ ++G+ PD +TYN++
Sbjct: 266 RMVKNGVMPDCITYNSI 282
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 35/110 (31%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNL----------------ILSCL 54
+Y+S + +L KNG ++A +I +S+ K NV + +L +
Sbjct: 313 TYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLM 372
Query: 55 VRNG-------------------KFESSLKLFDKIKQSGLTPDAVTYNTV 85
VRNG + ++ +F K++Q LTPD VTY T+
Sbjct: 373 VRNGIQPDRHVFSILICACTKHQNVDVAMFVFSKMRQQRLTPDVVTYGTL 422
Score = 34.7 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S + +G S +A+ I + + + + ++ L +NG+ + K+ D +
Sbjct: 278 TYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSM 337
Query: 71 KQSGLTPDAVTYNTV 85
+ GL P+ +TY+T+
Sbjct: 338 IKRGLKPNVITYSTL 352
>gi|255580124|ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529547|gb|EEF31500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 43/78 (55%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+T +YS ++ G G S+ A ++++ + ++ V+V N +L + GK + K
Sbjct: 210 QTRAKTYSILVRGWGDIGESVSACKVFDEMREQQCAVDVLAYNSLLEAFCKGGKVSEAYK 269
Query: 66 LFDKIKQSGLTPDAVTYN 83
+F ++ +G+ PDA T++
Sbjct: 270 MFREMGSNGIKPDACTFS 287
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 41/81 (50%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
G +S Y+ IK LGK G A+ +++ + NV+ N ++S L R G + +L
Sbjct: 468 GSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEAL 527
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
++++ G PD +YN +
Sbjct: 528 TTMRRMQEHGCIPDINSYNII 548
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 48/87 (55%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ + + +Y+ I+ LGK G +A ++ + E + + + N +++ L + G+ +
Sbjct: 289 HQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLD 348
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTVYQS 88
++KLF+++ P VTYNT+ ++
Sbjct: 349 DAVKLFEEMGTLQCIPSVVTYNTIIKA 375
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+HG I+SY+ + L K G +A+E+ +++ + K + N +L + G
Sbjct: 533 MQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGL 592
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
FE + KL ++ G D +TY+++ ++
Sbjct: 593 FEEAAKLMKEMNVLGFEYDLITYSSILEA 621
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 43/78 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y++ + L + G +AL + + ++ N+IL+ L + G ++++
Sbjct: 506 NVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEML 565
Query: 68 DKIKQSGLTPDAVTYNTV 85
+KQS + PDAV+YNTV
Sbjct: 566 SNMKQSAIKPDAVSYNTV 583
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 39/76 (51%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y S I LGK A E++ + + + + +++ L + G+ + ++ LFD+
Sbjct: 438 AAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDE 497
Query: 70 IKQSGLTPDAVTYNTV 85
+ + G TP+ YN +
Sbjct: 498 MNKLGCTPNVYAYNAL 513
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKV-NVFICNLILSCLVRNGKFESSL 64
+ + +Y+S I L G K E+YN +++E + + ++S + G+ +S++
Sbjct: 187 QPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYSALISAFCKLGRQDSAI 246
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
+L +++K +G+ P A Y +
Sbjct: 247 RLLNEMKDNGMQPTAKIYTML 267
>gi|356525788|ref|XP_003531505.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Glycine max]
Length = 572
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 41/79 (51%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
+SY+ + FL K GN A+++ + N N ++ L +G SL+L D+
Sbjct: 135 ASYTHLVNFLCKRGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDR 194
Query: 70 IKQSGLTPDAVTYNTVYQS 88
+ + GL P+A TY+ + ++
Sbjct: 195 LTKKGLIPNAFTYSFLLEA 213
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ HG T+ +Y++ +K L +GN ++L++ + +T + N F + +L +
Sbjct: 160 MEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRLTKKGLIPNAFTYSFLLEAAYKERG 219
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++KL D I G P+ V+YN +
Sbjct: 220 VDEAMKLLDDIIAKGGEPNLVSYNVL 245
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 41/78 (52%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ S++ ++ L G +A E+ + E +V N++++ L NG+ E + K+
Sbjct: 273 SVVSFNILLRSLCYEGRWEEANELLAEMDKEDQPPSVVTYNILITSLSLNGRTEQAFKVL 332
Query: 68 DKIKQSGLTPDAVTYNTV 85
D++ +SG A +YN +
Sbjct: 333 DEMTRSGFKASATSYNPI 350
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 44/84 (52%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
G+ ++ SY+ + L K G + +A++++ + + +V N++L L G++E +
Sbjct: 235 GEPNLVSYNVLLTGLCKEGRTEEAIKLFQELPVKGFSPSVVSFNILLRSLCYEGRWEEAN 294
Query: 65 KLFDKIKQSGLTPDAVTYNTVYQS 88
+L ++ + P VTYN + S
Sbjct: 295 ELLAEMDKEDQPPSVVTYNILITS 318
Score = 34.3 bits (77), Expect = 9.8, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 39/78 (50%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +Y+ I L NG + +A ++ + +T K + N I++ L + GK + LK
Sbjct: 308 SVVTYNILITSLSLNGRTEQAFKVLDEMTRSGFKASATSYNPIIARLCKEGKVDLVLKCL 367
Query: 68 DKIKQSGLTPDAVTYNTV 85
D++ P+ TY+ +
Sbjct: 368 DQMIHRRCHPNEGTYSAI 385
>gi|356510096|ref|XP_003523776.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g18475-like [Glycine max]
Length = 640
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K +Y+S I FL +NG +A+ + I + + + + N+IL L R +FE +L
Sbjct: 466 KPDTVTYTSLINFLCRNGQIGEAMGLLKEIKENTCQADTVTFNVILGGLCREDRFEEALD 525
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
+ +K+ Q G+ + +Y V S
Sbjct: 526 MLEKLPQQGVYLNKGSYRIVLNS 548
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+ I K GN KALEI+ +++ + V ++ L + G+ + + KLFD
Sbjct: 214 VFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFD 273
Query: 69 KIKQSGLTPDAVTYNTVYQS 88
+ + G+ PD V YN + S
Sbjct: 274 EAVRRGIRPDLVLYNALINS 293
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ I +GN +A EI + + + N ++ L G+ + + KL D++
Sbjct: 287 YNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT 346
Query: 72 QSGLTPDAVTYNTV 85
+ G+ PD VTYNT+
Sbjct: 347 KRGIQPDLVTYNTL 360
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M + G + ++ +Y+S I L K G + ++++ + ++ + N +++ +G
Sbjct: 240 MSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 299
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + ++ ++++ + PD VTYNT+
Sbjct: 300 IDRAFEIMGEMEKKRIAPDDVTYNTL 325
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M + G + + +Y++ I G+ AL I N + ++ + N ++ L +NG+
Sbjct: 345 MTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 404
Query: 60 FESSLKLFDKIKQSGLTPDAVTY 82
+ + + ++ ++G+TPD TY
Sbjct: 405 GDDAENMVKEMVENGITPDDSTY 427
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M +HG T ++ +Y++ + + K+ NS +ALE+ + + ++ + I+ L R +
Sbjct: 549 MMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDR 608
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E ++K+F ++ G+ P AV YN +
Sbjct: 609 VEEAIKMFHIVQDLGMRPKAVIYNKI 634
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 41/77 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
++ ++F + G +A+++ ++ N +CN++++ + + G+ + + + + +
Sbjct: 318 TFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM 377
Query: 71 KQSGLTPDAVTYNTVYQ 87
G +PD ++Y TV +
Sbjct: 378 GSYGCSPDTISYTTVLK 394
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 45/82 (54%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ S+ +Y+ ++ + K+ +A+E+ + + + N+ N+I++ + R G+ + + +
Sbjct: 208 QPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARE 267
Query: 66 LFDKIKQSGLTPDAVTYNTVYQ 87
+++ G PD V+Y TV +
Sbjct: 268 FLNRLSSYGFQPDTVSYTTVLK 289
Score = 37.4 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 45/85 (52%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+Q+ ++ +++ + F + G +A+E+ + + N+ N +L + ++
Sbjct: 515 LQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNS 574
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
E +L+L + +G++PD VTY+++
Sbjct: 575 EEALELLHGLVSNGVSPDIVTYSSI 599
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I+ L G +AL + + + + +V ++L + ++ F ++++ D++
Sbjct: 178 TYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEM 237
Query: 71 KQSGLTPDAVTYNTV 85
+ G TP+ VTYN +
Sbjct: 238 RAKGCTPNIVTYNVI 252
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+ I K GN KALEI+ +++ + V ++ L + G+ + + KLFD
Sbjct: 327 VFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFD 386
Query: 69 KIKQSGLTPDAVTYNTVYQS 88
+ + G+ PD V YN + S
Sbjct: 387 EAVRRGIRPDLVLYNALINS 406
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ I +GN +A EI + + + N ++ L G+ + + KL D++
Sbjct: 400 YNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT 459
Query: 72 QSGLTPDAVTYNTV 85
+ G+ PD VTYNT+
Sbjct: 460 KRGIQPDLVTYNTL 473
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M + G + ++ +Y+S I L K G + ++++ + ++ + N +++ +G
Sbjct: 353 MSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 412
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + ++ ++++ + PD VTYNT+
Sbjct: 413 IDRAFEIMGEMEKKRIAPDDVTYNTL 438
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 43/78 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++++Y+ + L +G +A E+ + + ++VF N++++ + G + +L++F
Sbjct: 291 TVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIF 350
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ + + G+ VTY ++
Sbjct: 351 ENMSRRGVRATVVTYTSL 368
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M + G + + +Y++ I G+ AL I N + ++ + N ++ L +NG+
Sbjct: 458 MTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 517
Query: 60 FESSLKLFDKIKQSGLTPDAVTY 82
+ + + ++ ++G+TPD TY
Sbjct: 518 GDDAENMVKEMVENGITPDDSTY 540
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M +HG T ++ +Y++ + + K+ NS +ALE+ + + ++ + I+ L R +
Sbjct: 518 MMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDR 577
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E ++K+F ++ G+ P AV YN +
Sbjct: 578 VEEAIKMFHIVQDLGMRPKAVIYNKI 603
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 41/77 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
++ ++F + G +A+++ ++ N +CN++++ + + G+ + + + + +
Sbjct: 287 TFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM 346
Query: 71 KQSGLTPDAVTYNTVYQ 87
G +PD ++Y TV +
Sbjct: 347 GSYGCSPDTISYTTVLK 363
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 45/82 (54%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ S+ +Y+ ++ + K+ +A+E+ + + + N+ N+I++ + R G+ + + +
Sbjct: 177 QPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARE 236
Query: 66 LFDKIKQSGLTPDAVTYNTVYQ 87
+++ G PD V+Y TV +
Sbjct: 237 FLNRLSSYGFQPDTVSYTTVLK 258
Score = 37.4 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 45/85 (52%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+Q+ ++ +++ + F + G +A+E+ + + N+ N +L + ++
Sbjct: 484 LQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNS 543
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
E +L+L + +G++PD VTY+++
Sbjct: 544 EEALELLHGLVSNGVSPDIVTYSSI 568
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I+ L G +AL + + + + +V ++L + ++ F ++++ D++
Sbjct: 147 TYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEM 206
Query: 71 KQSGLTPDAVTYNTV 85
+ G TP+ VTYN +
Sbjct: 207 RAKGCTPNIVTYNVI 221
>gi|71027557|ref|XP_763422.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350375|gb|EAN31139.1| hypothetical protein TP03_0402 [Theileria parva]
Length = 596
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 1 MQQHGKTSISS--YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNG 58
M++ GK ++ Y++ IK G+N KA+ I+ + + + N N ++ R G
Sbjct: 230 MKERGKVKPNTIMYTTLIKGYGQNKQLDKAMRIFRLMQQDGVQPNTVTYNSVIDACARVG 289
Query: 59 KFESSLKLFDKIKQSGLTPDAVTYNTV 85
+ S+ +L +++ SG+ PD +T++T+
Sbjct: 290 EMNSATRLLEEMLSSGIEPDLITFSTI 316
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESD-KVNVFICNLILSCLVRNGKFESSLKLFDKIKQSG 74
IK G++G K E+ + + + +N + ++S + NGK+ L ++ +K +G
Sbjct: 387 IKMYGRSGQLDKVFELADELPKRYNFSINTHVYTCLMSACITNGKYSMVLDIYKYMKING 446
Query: 75 LTPDAVTYNTVYQ 87
+ PDA T+ T+ Q
Sbjct: 447 VKPDAKTFETIIQ 459
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 45/80 (56%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ SY++ I GN A I +++ + + + + ++S + + G+ E +
Sbjct: 259 KPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASG 318
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LFDK+ + GL P+AVTYNT+
Sbjct: 319 LFDKMVEIGLVPNAVTYNTL 338
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 39/77 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I L + +A +++ I D+ +V + N ++ NG E + L ++
Sbjct: 439 TYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEM 498
Query: 71 KQSGLTPDAVTYNTVYQ 87
+ + PD VT+NT+ Q
Sbjct: 499 DRKSVPPDEVTFNTLMQ 515
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 22 NGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVT 81
NGN +A + + +S + N ++ R GK E + L D++K+ G+ PD ++
Sbjct: 485 NGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHIS 544
Query: 82 YNTV 85
YNT+
Sbjct: 545 YNTL 548
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I + GN+ KA +++N + + + ++ L R + + + LF+KI
Sbjct: 404 TYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI 463
Query: 71 KQSGLTPDAVTYNTV 85
G++PD + +N +
Sbjct: 464 LDQGVSPDVIMFNAM 478
>gi|62734288|gb|AAX96397.1| expressed protein [Oryza sativa Japonica Group]
gi|77550330|gb|ABA93127.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 661
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESD-----KVNVFICNLILSCLVRNGKFESSLK 65
SY+ + LG+NG AL++++ + +E D VN+ N+++ R +F+ +++
Sbjct: 322 SYNMVLDALGRNGKLDDALQLFDRMCEEHDPPRRIAVNLGSFNVMVDAYCRAERFQDAIE 381
Query: 66 LFDKIKQSGLTPDAVTYNTVYQSDHITWI 94
+F K+ + PDA++YN + I W+
Sbjct: 382 VFGKMGEKRCAPDALSYNNL-----IDWL 405
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 44 VFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
VF CN +L+ L+R ++ L L + Q+ + P TYN + Q+
Sbjct: 137 VFTCNAVLAALLRQARYADLLSLHRFVTQASVAPTVATYNLLLQA 181
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 20/99 (20%)
Query: 5 GKTSISSYSSYIKFLGKN--------GNSLK----------ALEIYNSITDESDKVN--V 44
G T +S Y ++ LG GN +K A++ Y + E KV
Sbjct: 261 GDTVVSLYEELVEKLGGGQILDGMVYGNLMKGYFLKGMEKEAMDCYAEVLGEGSKVRFGA 320
Query: 45 FICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYN 83
N++L L RNGK + +L+LFD++ + P + N
Sbjct: 321 VSYNMVLDALGRNGKLDDALQLFDRMCEEHDPPRRIAVN 359
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ I +LGKN +A ++Y + + + + L++ + + + S+ F+K+
Sbjct: 397 SYNNLIDWLGKNELVGEAEQLYKEMGERGVNPDEYTYVLLIESYFKVDRVDDSVSYFNKM 456
Query: 71 KQSGLTPDAVTYNTV 85
+GL P+A +N V
Sbjct: 457 FVAGLRPNANAFNKV 471
>gi|297611745|ref|NP_001067799.2| Os11g0433600 [Oryza sativa Japonica Group]
gi|255680050|dbj|BAF28162.2| Os11g0433600, partial [Oryza sativa Japonica Group]
Length = 487
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESD-----KVNVFICNLILSCLVRNGKFESSLK 65
SY+ + LG+NG AL++++ + +E D VN+ N+++ R +F+ +++
Sbjct: 148 SYNMVLDALGRNGKLDDALQLFDRMCEEHDPPRRIAVNLGSFNVMVDAYCRAERFQDAIE 207
Query: 66 LFDKIKQSGLTPDAVTYNTVYQSDHITWI 94
+F K+ + PDA++YN + I W+
Sbjct: 208 VFGKMGEKRCAPDALSYNNL-----IDWL 231
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 20/99 (20%)
Query: 5 GKTSISSYSSYIKFLGKN--------GNSLK----------ALEIYNSITDESDKVN--V 44
G T +S Y ++ LG GN +K A++ Y + E KV
Sbjct: 87 GDTVVSLYEELVEKLGGGQILDGMVYGNLMKGYFLKGMEKEAMDCYAEVLGEGSKVRFGA 146
Query: 45 FICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYN 83
N++L L RNGK + +L+LFD++ + P + N
Sbjct: 147 VSYNMVLDALGRNGKLDDALQLFDRMCEEHDPPRRIAVN 185
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ I +LGKN +A ++Y + + + + L++ + + + S+ F+K+
Sbjct: 223 SYNNLIDWLGKNELVGEAEQLYKEMGERGVNPDEYTYVLLIESYFKVDRVDDSVSYFNKM 282
Query: 71 KQSGLTPDAVTYNTV 85
+GL P+A +N V
Sbjct: 283 FVAGLRPNANAFNKV 297
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 45/80 (56%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ SY++ I GN A I +++ + + + + ++S + + G+ E +
Sbjct: 281 KPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASG 340
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LFDK+ + GL P+AVTYNT+
Sbjct: 341 LFDKMVEIGLVPNAVTYNTL 360
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 39/77 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I L + +A +++ I D+ +V + N ++ NG E + L ++
Sbjct: 461 TYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEM 520
Query: 71 KQSGLTPDAVTYNTVYQ 87
+ + PD VT+NT+ Q
Sbjct: 521 DRKSVPPDEVTFNTLMQ 537
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 22 NGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVT 81
NGN +A + + +S + N ++ R GK E + L D++K+ G+ PD ++
Sbjct: 507 NGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHIS 566
Query: 82 YNTV 85
YNT+
Sbjct: 567 YNTL 570
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I + GN+ KA +++N + + + ++ L R + + + LF+KI
Sbjct: 426 TYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI 485
Query: 71 KQSGLTPDAVTYNTV 85
G++PD + +N +
Sbjct: 486 LDQGVSPDVIMFNAM 500
>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+S I+ +G +AL + + + ++F N+I++ L + G+ +S+ +F +
Sbjct: 502 YNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMH 561
Query: 72 QSGLTPDAVTYNTV 85
+GL PD VTYNT+
Sbjct: 562 HTGLIPDIVTYNTL 575
>gi|125568888|gb|EAZ10403.1| hypothetical protein OsJ_00236 [Oryza sativa Japonica Group]
Length = 378
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESD-----KVNVFICNLILSCLVRNGKFESSLK 65
SY+ + LG+NG AL++++ + +E D VN+ N+++ R +F+ +++
Sbjct: 39 SYNMVLDALGRNGKLDDALQLFDRMCEEHDPPRRIAVNLGSFNVMVDAYCRAERFQDAIE 98
Query: 66 LFDKIKQSGLTPDAVTYNTVYQSDHITWI 94
+F K+ + PDA++YN + I W+
Sbjct: 99 VFGKMGEKRCAPDALSYNNL-----IDWL 122
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVN--VFICNLILSCLVRNGKFESSLKLFDK 69
Y + +K G +A++ Y + E KV N++L L RNGK + +L+LFD+
Sbjct: 3 YGNLMKGYFLKGMEKEAMDCYAEVLGEGSKVRFGAVSYNMVLDALGRNGKLDDALQLFDR 62
Query: 70 IKQSGLTPDAVTYN 83
+ + P + N
Sbjct: 63 MCEEHDPPRRIAVN 76
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ I +LGKN +A ++Y + + + + L++ + + + S+ F+K+
Sbjct: 114 SYNNLIDWLGKNELVGEAEQLYKEMGERGVNPDEYTYVLLIESYFKVDRVDDSVSYFNKM 173
Query: 71 KQSGLTPDAVTYNTV 85
+GL P+A +N V
Sbjct: 174 FVAGLRPNANAFNKV 188
>gi|125534241|gb|EAY80789.1| hypothetical protein OsI_35969 [Oryza sativa Indica Group]
Length = 515
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESD-----KVNVFICNLILSCLVRNGKFESSLK 65
SY+ + LG+NG AL++++ + +E D VN+ N+++ R +F+ +++
Sbjct: 176 SYNMVLDALGRNGKLDDALQLFDRMCEEHDPPRRIAVNLGSFNVMVDAYCRAERFQDAIE 235
Query: 66 LFDKIKQSGLTPDAVTYNTVYQSDHITWI 94
+F K+ + PDA++YN + I W+
Sbjct: 236 VFGKMGEKRCAPDALSYNNL-----IDWL 259
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 22 NGNSLKALEIYNSITDESDKVN--VFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDA 79
NG +AL Y + E KV N++L L RNGK + +L+LFD++ + P
Sbjct: 150 NGMDNEALHCYAEVLGEGSKVRFGAVSYNMVLDALGRNGKLDDALQLFDRMCEEHDPPRR 209
Query: 80 VTYN 83
+ N
Sbjct: 210 IAVN 213
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ I +LGKN +A ++Y + + + + L++ + + + S+ F+K+
Sbjct: 251 SYNNLIDWLGKNELVGEAEQLYKEMGERGVNPDEYTYVLLIESCFKVDRVDDSVAYFNKM 310
Query: 71 KQSGLTPDAVTYNTV 85
+GL P+A +N V
Sbjct: 311 FDAGLRPNANAFNKV 325
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+++Y+S + + + K+ +I I + K ++ N ++ RNG+ + + ++F
Sbjct: 675 SLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIF 734
Query: 68 DKIKQSGLTPDAVTYNTV---YQSDHI 91
++K GL PD +TYNT Y SD +
Sbjct: 735 AEMKDFGLAPDVITYNTFIASYASDSM 761
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 46/78 (58%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
SI +Y+S I ++G +A+E+ + + + K +VF +LS + GK + ++K+F
Sbjct: 360 SIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVF 419
Query: 68 DKIKQSGLTPDAVTYNTV 85
++++ +G P+ T+N +
Sbjct: 420 EEMRVAGCQPNICTFNAL 437
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK-LF 67
I +Y+S I NG +A+ ++ + +E + + N+IL+ + G S + L
Sbjct: 220 IYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLV 279
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
D +K SG+ PD TYNT+ S
Sbjct: 280 DSMKSSGVAPDLYTYNTLISS 300
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 38/70 (54%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGL 75
I LGK G + A + + + ++ ++++ +++ NG++ ++ +F K+++ G
Sbjct: 192 ISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGC 251
Query: 76 TPDAVTYNTV 85
P +TYN +
Sbjct: 252 RPTLITYNVI 261
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALE-IYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
+ ++ +Y+ + GK G + + +S+ +++ N ++S R +E +
Sbjct: 252 RPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAA 311
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
++F+++K +G +PD VTYN +
Sbjct: 312 EVFEEMKAAGFSPDKVTYNAL 332
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 43/80 (53%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ +I ++++ IK G GN ++ ++++ I ++ N +L+ +NG
Sbjct: 428 QPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSG 487
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F ++K++G P+ T+NT+
Sbjct: 488 VFKEMKRAGFVPERDTFNTL 507
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + GK+ +A+E+ + ++ N ++S R+G + +++L ++
Sbjct: 328 TYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQM 387
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ PD TY T+
Sbjct: 388 VKKGIKPDVFTYTTL 402
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 39/80 (48%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y++ + K G A++++ + + N+ N ++ G F +K
Sbjct: 393 KPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMK 452
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F++IK PD VT+NT+
Sbjct: 453 VFEEIKICECVPDIVTWNTL 472
Score = 34.3 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 38/84 (45%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
+Q I++ ++ + G+ K EI N I D ++ N ++ R FE
Sbjct: 634 EQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFE 693
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
S + +I G+ PD +++NTV
Sbjct: 694 KSEDILREIIAKGMKPDIISFNTV 717
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ I L K G + +ALE+ N + + + ++ + I S L R + E +++ F K+
Sbjct: 403 SYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKV 462
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ P+ V YN +
Sbjct: 463 QDMGIRPNTVLYNAI 477
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I SY++ + L + G A+E+ + + D+ + N ++ L + GK + +L+L +
Sbjct: 366 IVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLN 425
Query: 69 KIKQSGLTPDAVTYNTV 85
++ GL PD +TY+T+
Sbjct: 426 EMVTKGLQPDIITYSTI 442
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 30/46 (65%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
NV N+++S L R G E ++++ D+I + G TP++++YN + +
Sbjct: 295 NVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHA 340
Score = 38.5 bits (88), Expect = 0.58, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I+ L G + AL + + + +V ++L + ++ ++KL D++
Sbjct: 158 TYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 217
Query: 71 KQSGLTPDAVTYNTV 85
+ G PD +TYN V
Sbjct: 218 RAKGCAPDIITYNVV 232
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M Q G ++ +++ I FL + G A+E+ + I N N IL + K
Sbjct: 287 MSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKK 346
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++ + + G PD V+YNT+
Sbjct: 347 MDRAMAFVELMVSRGCYPDIVSYNTL 372
Score = 34.3 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 37/77 (48%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y+ + + + G A+E S+ + N N++L L ++E + KL
Sbjct: 226 IITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMA 285
Query: 69 KIKQSGLTPDAVTYNTV 85
++ Q G P+ VT+N +
Sbjct: 286 EMSQKGYPPNVVTFNML 302
>gi|255660982|gb|ACU25660.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 350
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ G +YS+ I L K N +A+ + N + K N + N +++ LV KFE
Sbjct: 96 QKGGVVDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFE 155
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
++++F ++ +P +TYNT+
Sbjct: 156 DAIRVFREMGTMHCSPTIITYNTL 179
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 45/81 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+ +YS +K L + KAL+++N +T + K +V + N+++ L GK + +L L+
Sbjct: 207 GVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLY 266
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
+ + P+ V++NT+ +
Sbjct: 267 FDMNRWKCAPNLVSHNTLMEG 287
>gi|255660998|gb|ACU25668.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 376
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ G +YS+ I L K N KA+ + N + K N + N +++ LV KFE
Sbjct: 122 QKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCKPNAHVYNTLINGLVGASKFE 181
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
++++F ++ +P +TYNT+
Sbjct: 182 DAIRVFREMGTVRCSPTIITYNTL 205
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 45/81 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +YS +K L + +AL+++N + + K +V + N+++ L GK + +L L+
Sbjct: 233 SVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQLALSLY 292
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
+ + P+ VT+NT+ +
Sbjct: 293 JDMNRWKCAPNLVTHNTLMEG 313
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY+ +I+ + N + + + NVF N I+ L +NGK E + +L ++
Sbjct: 289 SYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHEM 348
Query: 71 KQSGLTPDAVTYNTV--YQSDH 90
+ G++PDA +YNT+ Y +H
Sbjct: 349 MERGVSPDAWSYNTILAYHCEH 370
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 39/72 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS ++ G G +++A ++++ + ++V N +L L + G + + K+F +I
Sbjct: 219 TYSILVRGWGDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREI 278
Query: 71 KQSGLTPDAVTY 82
G+ PDA +Y
Sbjct: 279 GSHGVEPDACSY 290
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+++Y+S + + + K+ +I I + K ++ N ++ RNG+ + + ++F
Sbjct: 675 SLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIF 734
Query: 68 DKIKQSGLTPDAVTYNTV---YQSDHI 91
++K GL PD +TYNT Y SD +
Sbjct: 735 AEMKDFGLAPDVITYNTFIASYASDSM 761
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 46/78 (58%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
SI +Y+S I ++G +A+E+ + + + K +VF +LS + GK + ++K+F
Sbjct: 360 SIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVF 419
Query: 68 DKIKQSGLTPDAVTYNTV 85
++++ +G P+ T+N +
Sbjct: 420 EEMRVAGCQPNICTFNAL 437
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK-LF 67
I +Y+S I NG +A+ ++ + +E + + N+IL+ + G S + L
Sbjct: 220 IYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLV 279
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
D +K SG+ PD TYNT+ S
Sbjct: 280 DSMKSSGVAPDLYTYNTLISS 300
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 38/70 (54%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGL 75
I LGK G + A + + + ++ ++++ +++ NG++ ++ +F K+++ G
Sbjct: 192 ISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGC 251
Query: 76 TPDAVTYNTV 85
P +TYN +
Sbjct: 252 RPTLITYNVI 261
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALE-IYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
+ ++ +Y+ + GK G + + +S+ +++ N ++S R +E +
Sbjct: 252 RPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAA 311
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
++F+++K +G +PD VTYN +
Sbjct: 312 EVFEEMKAAGFSPDKVTYNAL 332
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 43/80 (53%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ +I ++++ IK G GN ++ ++++ I ++ N +L+ +NG
Sbjct: 428 QPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSG 487
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F ++K++G P+ T+NT+
Sbjct: 488 VFKEMKRAGFVPERDTFNTL 507
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + GK+ +A+E+ + ++ N ++S R+G + +++L ++
Sbjct: 328 TYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQM 387
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ PD TY T+
Sbjct: 388 VKKGIKPDVFTYTTL 402
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 39/80 (48%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y++ + K G A++++ + + N+ N ++ G F +K
Sbjct: 393 KPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMK 452
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F++IK PD VT+NT+
Sbjct: 453 VFEEIKICECVPDIVTWNTL 472
Score = 34.3 bits (77), Expect = 9.3, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 38/84 (45%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
+Q I++ ++ + G+ K EI N I D ++ N ++ R FE
Sbjct: 634 EQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFE 693
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
S + +I G+ PD +++NTV
Sbjct: 694 KSEDILREIIAKGMKPDIISFNTV 717
>gi|302790315|ref|XP_002976925.1| hypothetical protein SELMODRAFT_105729 [Selaginella moellendorffii]
gi|300155403|gb|EFJ22035.1| hypothetical protein SELMODRAFT_105729 [Selaginella moellendorffii]
Length = 395
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
++ I K +S KA ++++ + D +VF+ N++++ ++G +E SL LF +++
Sbjct: 116 TTIIHRYSKFSSSGKARQVFDKVRDP----DVFVYNVMVAAYAKDGLYEESLGLFQRMQM 171
Query: 73 SGLTPDAVTY 82
G+TPD +T+
Sbjct: 172 EGITPDKITF 181
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 44/81 (54%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+++Y+S + ++ N ++ E+ I + K ++ N ++ RNG+ + + ++F
Sbjct: 671 SLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIF 730
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
+K GL PD +TYNT S
Sbjct: 731 SYMKTYGLVPDVITYNTFVAS 751
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 45/78 (57%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
SI +Y+S I ++G +A+E+ + + ++ K +VF +LS + G E ++++F
Sbjct: 357 SIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIF 416
Query: 68 DKIKQSGLTPDAVTYNTV 85
+++ +G P+ T+N +
Sbjct: 417 GEMRAAGCKPNICTFNAL 434
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 37/70 (52%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGL 75
I LGK G A I N++ + ++V+ +++ NG++ ++ +F K+++ G
Sbjct: 189 ITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEEGC 248
Query: 76 TPDAVTYNTV 85
P +TYN +
Sbjct: 249 KPTLITYNVI 258
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALE-IYNSITDESDKVNVFICNLILSCLVRNG 58
M++ G K ++ +Y+ + GK G + + + + + + N ++SC R
Sbjct: 243 MEEEGCKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGS 302
Query: 59 KFESSLKLFDKIKQSGLTPDAVTYNTV 85
+E + ++F+++K SG +PD VT+NT+
Sbjct: 303 LYEEAAQVFEEMKLSGFSPDKVTFNTL 329
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 43/85 (50%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+++ G +S+ ++ I G+ KA EI N + + ++ N ++ R+ F
Sbjct: 629 LKKKGSPDLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSENF 688
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
E S ++ +I GL PD ++YNTV
Sbjct: 689 ERSEEVLKEILAKGLKPDLISYNTV 713
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 39/80 (48%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y++ + K G A+ I+ + K N+ N ++ G+F +K
Sbjct: 390 KPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMK 449
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F++I+ PD VT+NT+
Sbjct: 450 VFEEIEICNCAPDIVTWNTL 469
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK-LF 67
+ +Y+S I NG A+ ++ + +E K + N+IL+ + G S + L
Sbjct: 217 VYAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMGMPWSKISGLV 276
Query: 68 DKIKQSGLTPDAVTYNTV 85
+K SG+ PD TYNT+
Sbjct: 277 HGMKSSGVAPDDYTYNTL 294
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
++++ + GK+ +A+E+ + ++ N ++S R+G +++L D++
Sbjct: 325 TFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQM 384
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ PD TY T+
Sbjct: 385 VEKGIKPDVFTYTTL 399
Score = 35.0 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 42/80 (52%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K +I ++++ IK G G + ++++ I + ++ N +L+ +NG
Sbjct: 425 KPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSG 484
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F ++K++G P+ T+NT+
Sbjct: 485 VFKEMKRAGFVPERDTFNTL 504
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSI-----TDESDKVNVFICNLILSCLVRNGKFESS 63
I ++++ + G+NG + ++ + E D N I S R G F+ +
Sbjct: 463 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLI-----SAYSRCGSFQQA 517
Query: 64 LKLFDKIKQSGLTPDAVTYNTV 85
+ ++ ++ ++G+TPD +YN V
Sbjct: 518 MAVYKRMLEAGVTPDLSSYNAV 539
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y++ + +L KN +A+ + IT + N +L+ L + G+ E ++ L
Sbjct: 267 IHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR 326
Query: 69 KIKQSGLTPDAVTYNTV 85
KI +G TPD VTY ++
Sbjct: 327 KIVDNGCTPDVVTYTSL 343
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M HG + + S+ I L K G A+ I+ S+ N + + ++ L + K
Sbjct: 117 MTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 176
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +L++ ++K++ TPD +TYN +
Sbjct: 177 MDCALEMLAQMKKAFCTPDTITYNVL 202
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M HG + + S+ I L K G A+ I+ S+ N + + ++ L + K
Sbjct: 398 MTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 457
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +L++ ++K++ TPD +TYN +
Sbjct: 458 MDCALEMLAQMKKAFCTPDTITYNIL 483
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
+A+ + IT + N +L+ L + G+ E ++ L KI +G TPD VTY ++
Sbjct: 4 EAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL 62
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 40/74 (54%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ I+ L + G +A +Y ++T +V + ++ L + G+ +++++F ++
Sbjct: 94 YTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSME 153
Query: 72 QSGLTPDAVTYNTV 85
GL P+ V Y+ +
Sbjct: 154 ARGLAPNEVVYSAL 167
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 40/74 (54%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ I+ L + G +A +Y ++T +V + ++ L + G+ +++++F ++
Sbjct: 375 YTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSME 434
Query: 72 QSGLTPDAVTYNTV 85
GL P+ V Y+ +
Sbjct: 435 ARGLAPNEVVYSAL 448
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALE-IYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
K + +Y+ I K GN+ A + T +++ I+ L +N K E ++
Sbjct: 228 KPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAV 287
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
L +KI +G TP TYN +
Sbjct: 288 ALMEKITANGCTPTIATYNAL 308
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y++ + +L KN +A+ + IT + N +L+ L + G+ E ++ L
Sbjct: 34 IHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR 93
Query: 69 KIKQSGLTPDAVTYNTV 85
KI +G TPD VTY ++
Sbjct: 94 KIVDNGCTPDVVTYTSL 110
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I L K+G+ A ++ + + K +V+ N+++S + G +++ +FD +
Sbjct: 246 TYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDM 305
Query: 71 KQSGLTPDAVTYNTV 85
S +P+ VTY T+
Sbjct: 306 SSSRCSPNVVTYGTL 320
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 36/75 (48%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
++S I L K G ++A + T +++ I+ L +N K + ++ L +KI
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 71 KQSGLTPDAVTYNTV 85
+G TP TYN +
Sbjct: 61 TANGCTPTIATYNAL 75
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 41/74 (55%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ I+ L + G +A +Y ++T + +V + ++ L + G+ +++++F ++
Sbjct: 142 YTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSME 201
Query: 72 QSGLTPDAVTYNTV 85
GL P+ V Y+ +
Sbjct: 202 ARGLAPNEVVYSAL 215
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 37/77 (48%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+S I LGK S +A +++ + ++ ++ L++ GK + ++
Sbjct: 104 VVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYK 163
Query: 69 KIKQSGLTPDAVTYNTV 85
+ G PD VT +T+
Sbjct: 164 TMTSQGCVPDVVTLSTM 180
>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 533
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
N+F CNL++ L + ES+ K+ D+I GL P+ VTY T+
Sbjct: 188 NIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTI 230
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 45/80 (56%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +Y++ I + + G +A +++ + + K N F N+++ L +NG + +++
Sbjct: 397 SLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVL 456
Query: 68 DKIKQSGLTPDAVTYNTVYQ 87
+++ +SG P+ T+ +++
Sbjct: 457 EEMLESGCFPNKTTFLILFE 476
>gi|255660984|gb|ACU25661.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 376
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ G +YS+ I L K N +A+ + N + K N + N +++ LV KFE
Sbjct: 122 QKGGVVDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFE 181
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
++++F ++ +P +TYNT+
Sbjct: 182 DAIRVFREMGTMHCSPTIITYNTL 205
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 45/81 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+ +YS +K L + KAL+++N +T + K +V + N+++ L GK + +L L+
Sbjct: 233 GVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLY 292
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
+ + P+ V++NT+ +
Sbjct: 293 FDMNRWKCAPNLVSHNTLMEG 313
>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 989
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y+S I K GN L AL I + +++ + +V N ++ L+R GK++ +
Sbjct: 601 IVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRY-VCS 659
Query: 69 KIKQSGLTPDAVTYNTV 85
++ + GL PD +TYNT+
Sbjct: 660 RMIELGLAPDCITYNTI 676
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 13 SSYIKFLG-KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
++Y KF+G + +SL I N I + V C+ IL R+GK + LF ++
Sbjct: 329 AAYCKFVGVEESHSLYKKMIMNGIMPD-----VVTCSSILYGFCRHGKLTEAAVLFREMY 383
Query: 72 QSGLTPDAVTYNTVYQS 88
+ GL P+ V+Y T+ S
Sbjct: 384 EMGLDPNHVSYATIINS 400
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ I L K+G ++A + + + ++ C ++ L + GK + + ++F+ I
Sbjct: 393 SYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETI 452
Query: 71 KQSGLTPDAVTYNTV 85
+ L P+ VTY+ +
Sbjct: 453 LKLNLAPNCVTYSAL 467
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 43/75 (57%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I + G +A EI NS+ D+ K ++F N I++ L + G++ + + ++
Sbjct: 155 TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 214
Query: 71 KQSGLTPDAVTYNTV 85
GL+PD TYNT+
Sbjct: 215 LNIGLSPDTTTYNTL 229
Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 38/65 (58%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
+NGN L+AL+I + + ++ ++V N IL+ L + + KLFD++ + G PD
Sbjct: 305 RNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFY 364
Query: 81 TYNTV 85
T+ T+
Sbjct: 365 TFTTL 369
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 35/58 (60%)
Query: 28 ALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
A E++ + ++NV+ N++++ L ++GKF+ +++ +G+ D VTYNT+
Sbjct: 102 AWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTL 159
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 41/80 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ + ++ IK ++G+S KA E + + + N +++ VR + +
Sbjct: 465 KPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFL 524
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+K+++ GL PD +TYN V
Sbjct: 525 WINKMEKEGLLPDIITYNVV 544
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 40/72 (55%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
++++ I ++GN KAL ++ ++T + K ++ N ++ + G+ E + +L+D +
Sbjct: 365 TFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGM 424
Query: 71 KQSGLTPDAVTY 82
+ P+ +TY
Sbjct: 425 ISRKIFPNHITY 436
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 45/80 (56%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ SY++ I GN A I +++ + + + + ++S + + G+ E +
Sbjct: 205 KPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASG 264
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LFDK+ + GL P+AVTYNT+
Sbjct: 265 LFDKMVEIGLVPNAVTYNTL 284
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 39/77 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I L + +A +++ I D+ +V + N ++ NG E + L ++
Sbjct: 385 TYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEM 444
Query: 71 KQSGLTPDAVTYNTVYQ 87
+ + PD VT+NT+ Q
Sbjct: 445 DRKSVPPDEVTFNTLMQ 461
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 22 NGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVT 81
NGN +A + + +S + N ++ R GK E + L D++K G+ PD ++
Sbjct: 431 NGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHIS 490
Query: 82 YNTV 85
YNT+
Sbjct: 491 YNTL 494
Score = 34.3 bits (77), Expect = 9.6, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I + GN+ +A +++N + + + ++ L R + + + LF+KI
Sbjct: 350 TYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI 409
Query: 71 KQSGLTPDAVTYNTV 85
G++PD + +N +
Sbjct: 410 LDQGVSPDVIMFNAM 424
>gi|297812025|ref|XP_002873896.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319733|gb|EFH50155.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 507
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+++G ++ +YS+ + K G +A ++++ + K++ +++CL RNG+
Sbjct: 295 MKKNGCNPNVYNYSALMNGFCKEGKIQEAKQVFDEVKKTGLKLDTVGYTTLMNCLCRNGE 354
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++KL ++K S DA+TYN +
Sbjct: 355 IDEAMKLLGEMKASRCRADALTYNVI 380
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+S+Y+ I L + G+ A + N + + +V N+++ L + G+ ++KL D
Sbjct: 368 VSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLD 427
Query: 69 KIKQSGLTPDAVTYNTV 85
++ + GL P VTYNT+
Sbjct: 428 EMFEKGLNPSHVTYNTL 444
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G + ++ +Y+ I L +G +A+ + + + + NV N++++ +N
Sbjct: 254 MQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKT 313
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
++ LF+ +++ G+ P+A+TY T+
Sbjct: 314 VNEAINLFNDMEKQGVDPNAMTYTTL 339
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I K+ N A+ ++ + + + NV N++++ L +GK + ++ L D++
Sbjct: 230 TYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQM 289
Query: 71 KQSGLTPDAVTYNTV 85
S L P+ VT+N +
Sbjct: 290 VSSDLEPNVVTHNVL 304
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I K+G A +YN + D V N +++ L R G +++ L +++
Sbjct: 335 TYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEM 394
Query: 71 KQSGLTPDAVTYNTVYQS 88
L+ D VTYN + S
Sbjct: 395 VSKKLSADVVTYNILIDS 412
>gi|255661000|gb|ACU25669.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 376
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ G +YS+ I L K N KA+ + N + K N + N +++ LV KFE
Sbjct: 122 QKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCKPNAHVYNTLINGLVGASKFE 181
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
++++F ++ +P +TYNT+
Sbjct: 182 DAIRVFREMGTVHCSPTIITYNTL 205
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 45/81 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +YS +K L + +AL+++N + + K +V + N+++ L GK + +L L+
Sbjct: 233 SVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQRALSLY 292
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
+ + P+ VT+NT+ +
Sbjct: 293 FXMNRWKCAPNLVTHNTLMEG 313
>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1023
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y+S I K GN L AL I + +++ + +V N ++ L+R GK++ +
Sbjct: 601 IVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRY-VCS 659
Query: 69 KIKQSGLTPDAVTYNTV 85
++ + GL PD +TYNT+
Sbjct: 660 RMIELGLAPDCITYNTI 676
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 13 SSYIKFLG-KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
++Y KF+G + +SL I N I + V C+ IL R+GK + LF ++
Sbjct: 329 AAYCKFVGVEESHSLYKKMIMNGIMPD-----VVTCSSILYGFCRHGKLTEAAVLFREMY 383
Query: 72 QSGLTPDAVTYNTVYQS 88
+ GL P+ V+Y T+ S
Sbjct: 384 EMGLDPNHVSYATIINS 400
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ I L K+G ++A + + + ++ C ++ L + GK + + ++F+ I
Sbjct: 393 SYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETI 452
Query: 71 KQSGLTPDAVTYNTV 85
+ L P+ VTY+ +
Sbjct: 453 LKLNLAPNCVTYSAL 467
>gi|357499665|ref|XP_003620121.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495136|gb|AES76339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 408
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YSS I K+G +ALE+ + + D N+ N IL L + E ++ L KI
Sbjct: 314 AYSSLIDGFCKSGRIPQALELVDEMHDRGQPPNIITYNSILYALCKIHHVEKTIALLRKI 373
Query: 71 KQSGLTPDAVTYNTV 85
K G+ PDA TY +
Sbjct: 374 KVKGIQPDAYTYTIL 388
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 35/112 (31%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNV------------------------ 44
+ +Y++ + +L KNG S++A +I++S+ K N
Sbjct: 308 VFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLD 367
Query: 45 -----------FICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
+I N+++ ++GK + ++ LF K+++ GL PD VTY V
Sbjct: 368 MMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIV 419
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDK-----VNVFICNLILSCLVRNGK-FE 61
++ SY+ +K L S +AL + +++ D +V N +++ L+R G+ +
Sbjct: 161 NVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLD 220
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
++ LFD++ GL+PD VTYN++
Sbjct: 221 TAYHLFDQMLDQGLSPDVVTYNSI 244
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 40/79 (50%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ I +G +A ++ + + K N N +++ +NG+ E + LF
Sbjct: 518 VITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFR 577
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++ G+ P VTY+T+ Q
Sbjct: 578 QMASKGVNPGIVTYSTILQ 596
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+++S + +G A+ ++ + + + +VF N ++ L +NG+ + K+FD +
Sbjct: 275 THNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSM 334
Query: 71 KQSGLTPDAVTYNTV 85
+ G P++ TY T+
Sbjct: 335 VKRGHKPNSATYGTL 349
>gi|356527777|ref|XP_003532484.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 583
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNG---NSLKALEIYNSITDESDKVNVFICNLILSCLVR 56
M+++G K + S+Y++ IK G G S+K LE+ DE+ K N N+++
Sbjct: 118 MKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQ--DENVKPNDRTYNILIQAWCT 175
Query: 57 NGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
K E + + K+ SG+ PD VTYNT+ ++
Sbjct: 176 KKKLEEAWNVLHKMVASGIQPDVVTYNTMARA 207
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 41/80 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ +Y++ + L + + + + D K + + N +++ +GK + ++K
Sbjct: 54 KPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSESGKVDEAMK 113
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F K+K+ G P TYNT+
Sbjct: 114 IFQKMKEYGCKPTTSTYNTL 133
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 18 FLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTP 77
+GK G +A ++N++T+E K + +++ L R +F+S L K+ +G+ P
Sbjct: 32 LIGK-GKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKP 90
Query: 78 DAVTYNTV 85
D++ N +
Sbjct: 91 DSILLNAM 98
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +YS K + G KA + S++ + NV I I+S GK + + +L +
Sbjct: 338 IHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRAFRLCE 397
Query: 69 KIKQSGLTPDAVTYNTV 85
K+ + G +P+ TY T+
Sbjct: 398 KMHEMGTSPNLKTYETL 414
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 40/77 (51%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y++ + +L KN A+ + IT + N +L+ L + G+ E ++ L
Sbjct: 165 IHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR 224
Query: 69 KIKQSGLTPDAVTYNTV 85
KI +G TPD VTY ++
Sbjct: 225 KIVDNGCTPDVVTYTSL 241
Score = 40.8 bits (94), Expect = 0.093, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 41/78 (52%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +++ + L K+G L A++ + + T +++ I+ L +N K + ++ L
Sbjct: 129 SLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALM 188
Query: 68 DKIKQSGLTPDAVTYNTV 85
+KI +G TP TYN +
Sbjct: 189 EKITANGCTPTIATYNAL 206
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I L K+G+ A ++ + + K +V+ N+++S + G +++ +FD +
Sbjct: 377 TYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDM 436
Query: 71 KQSGLTPDAVTYNTV 85
S +P+ VTY T+
Sbjct: 437 SSSHCSPNVVTYGTL 451
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 41/74 (55%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ I+ L + G +A +Y ++T + +V + ++ L + G+ +++++F ++
Sbjct: 273 YTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSME 332
Query: 72 QSGLTPDAVTYNTV 85
GL P+ V Y+ +
Sbjct: 333 ARGLAPNEVVYSAL 346
>gi|302786806|ref|XP_002975174.1| hypothetical protein SELMODRAFT_10825 [Selaginella moellendorffii]
gi|300157333|gb|EFJ23959.1| hypothetical protein SELMODRAFT_10825 [Selaginella moellendorffii]
Length = 555
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 45/75 (60%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS+ I GK G + +A+++Y ++ + K ++ +I + R G +++ L+LF +
Sbjct: 101 TYSAMIDLYGKAGRTAEAMDLYQTMRKNNWKPDLVSFGVIANVYSRVGDYQAILRLFRDM 160
Query: 71 KQSGLTPDAVTYNTV 85
+Q+ + P+ V +NT+
Sbjct: 161 EQAEIKPNVVLFNTL 175
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+ S I K G KAL++Y++I + K++V + N +L V +G + + L ++
Sbjct: 206 TLSILIDMYTKVGALDKALDVYDTIKQKKWKLDVLVYNTLLKSCVESGNIQRAESLIAEM 265
Query: 71 KQSGLTPDAVTY 82
++ PD +TY
Sbjct: 266 EREKQWPDHMTY 277
>gi|302791627|ref|XP_002977580.1| hypothetical protein SELMODRAFT_107283 [Selaginella moellendorffii]
gi|300154950|gb|EFJ21584.1| hypothetical protein SELMODRAFT_107283 [Selaginella moellendorffii]
Length = 555
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 45/75 (60%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS+ I GK G + +A+++Y ++ + K ++ +I + R G +++ L+LF +
Sbjct: 97 TYSAMIDLYGKAGRTAEAMDLYQTMRKNNWKPDLVSFGVIANVYSRVGDYQAILRLFRDM 156
Query: 71 KQSGLTPDAVTYNTV 85
+Q+ + P+ V +NT+
Sbjct: 157 EQAEIKPNVVLFNTL 171
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+ S I K G KAL++Y++I + K++V + N +L V +G + + L ++
Sbjct: 202 TLSILIDMYTKVGALDKALDVYDTIKQKKWKLDVLVYNTLLKSCVESGNIQRAESLIAEM 261
Query: 71 KQSGLTPDAVTY 82
+ PD +TY
Sbjct: 262 EMEKQWPDHMTY 273
>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS I L K G ++ ++ + + KVNV I ++ + G ++ LF+++
Sbjct: 274 AYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERM 333
Query: 71 KQSGLTPDAVTYNTV 85
K+ GL PD VTY V
Sbjct: 334 KKEGLEPDVVTYGVV 348
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 39/74 (52%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ I L K G + +AL + + DE V+ ++++ L R K E +LK++D +
Sbjct: 415 YNALIDALAKCGKTDEALAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMI 474
Query: 72 QSGLTPDAVTYNTV 85
G+TP A + +
Sbjct: 475 DKGITPTAAAFRAL 488
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 44/78 (56%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++S+ +S IK G G + L ++ + + + ++F N +L+ LV + ES+ ++
Sbjct: 131 NVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVL 190
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ ++ + PD VTYNT+
Sbjct: 191 EVMENGKIGPDVVTYNTM 208
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 50/85 (58%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+Q+ K +++ Y++ I K GN +A+ ++ + E + +V ++++C+ ++G+
Sbjct: 299 IQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRL 358
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +++ + + +G+ +A+ Y+++
Sbjct: 359 DEAMEYLEFCRVNGVAVNAMLYSSL 383
>gi|308806511|ref|XP_003080567.1| pentatricopeptide (ISS) [Ostreococcus tauri]
gi|116059027|emb|CAL54734.1| pentatricopeptide (ISS) [Ostreococcus tauri]
Length = 172
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
K L+AL+++ + + +V N+ + R G +L+LFD++ GLTPDAV
Sbjct: 60 KRDAPLEALKLFEEMVAIGHEPSVISYNVAMGACARAGDGARALRLFDELASKGLTPDAV 119
Query: 81 TYNTV 85
+ NT
Sbjct: 120 SVNTA 124
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
SI + ++ I L + G A IY I+ VNV+ N++++ L ++GK E
Sbjct: 188 VSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTF 247
Query: 67 FDKIKQSGLTPDAVTYNTV 85
++++ G+ PD VTYNT+
Sbjct: 248 LSEVQEKGVYPDIVTYNTL 266
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 46/77 (59%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y++ I G +A E+ +++ + V+ N +++ L ++GK+E + ++F
Sbjct: 260 IVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFA 319
Query: 69 KIKQSGLTPDAVTYNTV 85
++ +SGL+PD+ TY ++
Sbjct: 320 EMLRSGLSPDSTTYRSL 336
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
S+S + L G+ +A +++ + +S K V ICN ++ R+G +K+
Sbjct: 542 SFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKM 601
Query: 71 KQSGLTPDAVTYNTV 85
G PD ++YNT+
Sbjct: 602 ISEGFVPDCISYNTL 616
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
+SS + ++GN KAL +NS+ + + I +++ R G ++ L +++
Sbjct: 368 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEML 427
Query: 72 QSGLTPDAVTYNTV 85
Q G D VTYNT+
Sbjct: 428 QQGCAMDVVTYNTI 441
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFIC-NLILSCLVRNGKFESSLKLFD 68
++Y S + K G++++ I++ + D V +C + ++S R+G + +L F+
Sbjct: 331 TTYRSLLMEACKKGDAVETENIFSDMRSR-DVVPDLVCFSSMMSLFTRSGNLDKALMYFN 389
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
+K++GL PD V Y + Q
Sbjct: 390 SVKEAGLIPDNVIYTILIQ 408
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 46/85 (54%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+QQ + +Y++ + L K +A +++N +T+ + + +++ + G
Sbjct: 427 LQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNL 486
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+++++LF K+K+ + D VTYNT+
Sbjct: 487 QNAMELFKKMKEKRIKLDVVTYNTL 511
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I L K+G A E+ + + D N+F N ++ L +N + ++ L KI
Sbjct: 385 TYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKI 444
Query: 71 KQSGLTPDAVTYNTV 85
K G+ PD T+N +
Sbjct: 445 KDQGIQPDMYTFNIL 459
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%)
Query: 19 LGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPD 78
L K G A +++ + + VN + N++++ L + G F+ + L K+ +G+ PD
Sbjct: 463 LCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPD 522
Query: 79 AVTYNTVYQS 88
AVTY T+ Q+
Sbjct: 523 AVTYETLIQA 532
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY + I L K G + AL++ I + K+NV + N I+ L ++ + +L+ ++
Sbjct: 175 SYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQM 234
Query: 71 KQSGLTPDAVTYNTV 85
++PD VT++ +
Sbjct: 235 IAKKISPDVVTFSAL 249
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 17 KFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLT 76
K + K+ L A +N + + N+ IC LI GKF + +L++++ GL
Sbjct: 482 KVMQKSKMDLDASHPFNDVEPDVQTYNILICGLI-----NEGKFSEAEELYEEMPHRGLV 536
Query: 77 PDAVTYNTV 85
PD +TYN+V
Sbjct: 537 PDTITYNSV 545
Score = 37.7 bits (86), Expect = 0.76, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 44/80 (55%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ YS+ I L K+G A +++ + ++ N+F N +++ +G++ + +
Sbjct: 245 KPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQR 304
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L ++ + ++PD VT++ +
Sbjct: 305 LLREMFERKMSPDVVTFSVL 324
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I + GN AL++ + NV CN +L L NGK + +L++F +
Sbjct: 425 TYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVM 484
Query: 71 KQSGL-----------TPDAVTYNTV 85
++S + PD TYN +
Sbjct: 485 QKSKMDLDASHPFNDVEPDVQTYNIL 510
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G ++ +Y+ I +G +A + + + +V +++++ LV+ GK
Sbjct: 274 MQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGK 333
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
F + +L++++ G+ P+ +TYN++
Sbjct: 334 FFEAEELYNEMLPRGIIPNTITYNSM 359
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ ++S+ + L +AL ++ I K NV +++ L R G+ ++ L
Sbjct: 145 SLVTFSTLLHGLCVEDRVSEALHFFHQIC----KPNVIAFTTLMNGLCREGRVVEAVALL 200
Query: 68 DKIKQSGLTPDAVTYNTV 85
D++ + GL P+ +TY T+
Sbjct: 201 DRMVEDGLQPNQITYGTI 218
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 36/77 (46%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+ I L G +A E+Y + + N ++ L + + + + ++FD
Sbjct: 504 VQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFD 563
Query: 69 KIKQSGLTPDAVTYNTV 85
+ G +PD VT+ T+
Sbjct: 564 SMGSKGFSPDVVTFTTL 580
>gi|340719495|ref|XP_003398188.1| PREDICTED: pentatricopeptide repeat-containing protein 1-like
[Bombus terrestris]
Length = 628
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%)
Query: 3 QHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFES 62
+ + S Y + IK N AL I + + + DK N++I L+LS R G +
Sbjct: 126 KRQRLSHRDYCTLIKSHLYKKNLQLALNILDLMKENGDKPNLYIYRLLLSGFSRQGDVKQ 185
Query: 63 SLKLFDKIKQSGLTPDAVTYNTV 85
KLF +K+ GLTP A Y ++
Sbjct: 186 CFKLFKNLKERGLTPSASIYTSL 208
>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 874
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
K G + K LE+ NS+ N + N I+S R G+ + S KL +K+++ GL PD V
Sbjct: 194 KAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIV 253
Query: 81 TYNT 84
T+N+
Sbjct: 254 TFNS 257
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 45/79 (56%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
S+ SY+ +++ L ++G ++A + + D+ +++ N+++ L + G + +
Sbjct: 324 VSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTI 383
Query: 67 FDKIKQSGLTPDAVTYNTV 85
+K++G++PDAVTY +
Sbjct: 384 VGLMKRNGVSPDAVTYGCL 402
>gi|255572014|ref|XP_002526948.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533700|gb|EEF35435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 671
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESD-----KVNVFICNLILSCLV 55
++ G+ + YSS IK G + AL + + + N+FI N +LS +
Sbjct: 105 LKDKGELPLQVYSSMIKAFGWDNKMESALALVEWLKRRKEIGSSIGPNLFIYNSLLSAVK 164
Query: 56 RNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
++ FE + K+ + + Q G+ P+ VTYNT+
Sbjct: 165 KSKLFEEAEKILNDMTQEGIAPNVVTYNTL 194
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVN-------VFICNLILSCL 54
++H K S+S + I +GK ALEIY + D+ N V N++L+
Sbjct: 343 ERHSKISLSVCNHLIWLMGKAKKWWAALEIYEDLLDKGPNPNNMSYELIVSHFNILLTAA 402
Query: 55 VRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
+ G + ++L +K++ GL P + +N V
Sbjct: 403 RKRGIWRWGVRLLNKMEDKGLKPGSREWNAV 433
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 40/85 (47%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
++Q K +I SY + + L K +A+ ++ + K N++ ++ S GKF
Sbjct: 454 IEQGEKPTIVSYGALLSALEKGKLYDEAVRVWEHMLKVDVKPNLYAYTIMASVFAGQGKF 513
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+ K+ SG+ P +TYN +
Sbjct: 514 TYVDAIIQKMVSSGIEPTIITYNAI 538
>gi|302774719|ref|XP_002970776.1| hypothetical protein SELMODRAFT_94128 [Selaginella moellendorffii]
gi|300161487|gb|EFJ28102.1| hypothetical protein SELMODRAFT_94128 [Selaginella moellendorffii]
Length = 750
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 45/76 (59%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +++ I K G +A++++ ++ + +V + N I+S +NG+ + SL+LF
Sbjct: 205 VGMWTAVIAAYAKYGRWQEAIKLFETMESRTGPYSVLVWNAIISASFQNGQLKGSLELFW 264
Query: 69 KIKQSGLTPDAVTYNT 84
K+++ G+ PD++T T
Sbjct: 265 KMRRQGVRPDSLTLAT 280
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 31 IYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+YN++ E + NVF N++L L +NGK + + KL ++ G PD V+Y TV S
Sbjct: 166 LYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISS 223
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/92 (20%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ ++++YS+ I K+G+ + A E +N + + + NV + ++ L + F+ +
Sbjct: 381 RPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFD 440
Query: 66 LFDKIKQSGLTPDAVTYNT----VYQSDHITW 93
L D + G P +T+N + ++ + W
Sbjct: 441 LIDNMISDGCPPTVITFNNFIKGLCRAGRVEW 472
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 41/75 (54%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y++ I L +GN +A+ ++N + +S + NV + I+ ++G S+ + +
Sbjct: 348 NVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETW 407
Query: 68 DKIKQSGLTPDAVTY 82
+K+ G P+ V Y
Sbjct: 408 NKMINCGCRPNVVVY 422
>gi|328772064|gb|EGF82103.1| hypothetical protein BATDEDRAFT_10309, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 286
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
K I S+ + I K+G ++ +LE+ + +N+ I N I+S L +NGKF +
Sbjct: 90 AKLDIQSFVTLIDAYSKSGQTVSSLEVLDRALQSDIPLNIRIFNHIISGLAKNGKFAEMI 149
Query: 65 KLFDKIKQSGLTPDAVTYNTVY-----QSDH 90
K+ +++ P+ T+N + Q DH
Sbjct: 150 KVLVFMQEKEFLPNTATFNIIIDLFAKQGDH 180
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 42/77 (54%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ ++ SY++ + G+ G +A +I+++I V NL++S G ++ L
Sbjct: 196 QPNVVSYNTVLGAYGRAGMLSQAQDIFDTIDKMGISRTVTTYNLLISAYGFQGHMQTVLN 255
Query: 66 LFDKIKQSGLTPDAVTY 82
LF++I+ + L+PD T+
Sbjct: 256 LFEQIQDTNLSPDRNTF 272
>gi|302759174|ref|XP_002963010.1| hypothetical protein SELMODRAFT_78269 [Selaginella moellendorffii]
gi|300169871|gb|EFJ36473.1| hypothetical protein SELMODRAFT_78269 [Selaginella moellendorffii]
Length = 265
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +YS+ I LG +GN L A ++ I + +++ F N ++ C R + + +L
Sbjct: 34 KHDLVNYSTMIMILGDDGNYLMAEALFVEIQELGLRLDTFAVNNMIRCYTRVNRIQEALD 93
Query: 66 LFDKIKQSGLTPDAVTY 82
L+ K+ G PD T+
Sbjct: 94 LYRKMPYFGCHPDNCTF 110
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ++G K ++ SY S + KNG +A+ I + + + N + N I+ V +G
Sbjct: 286 MQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGP 345
Query: 60 FESSLKLFDKIKQSGLTPDAVTYN 83
+ + L +K+K +G++P VTYN
Sbjct: 346 NDQAFILVEKMKSNGISPSIVTYN 369
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY+ I + + G A+E+++ +T+ + N N ++ ++ G E+ +L D++
Sbjct: 17 SYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQM 76
Query: 71 KQSGLTPDAVTYNTV 85
GL P+A+TYN +
Sbjct: 77 VCHGLKPNAITYNVL 91
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS L +NG+S L ++ + + C+++L+ L ++GK + ++ +
Sbjct: 122 TYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSL 181
Query: 71 KQSGLTPDAVTYNTV 85
+GL P V YNT+
Sbjct: 182 VNAGLVPTRVIYNTL 196
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ +G ++ ++++ I G+ G K + + + + K NV I++ +NGK
Sbjct: 251 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 310
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
++ + D + + P+A YN +
Sbjct: 311 IPEAVAILDDMFHKDVLPNAQVYNAI 336
>gi|302797110|ref|XP_002980316.1| hypothetical protein SELMODRAFT_420032 [Selaginella moellendorffii]
gi|300151932|gb|EFJ18576.1| hypothetical protein SELMODRAFT_420032 [Selaginella moellendorffii]
Length = 1527
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 40/77 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +YS+ I LG +GN L A ++ I + +++ F N ++ C R + + +L
Sbjct: 1010 KHDLVNYSTMIMILGDDGNYLMAEALFVEIQELGLRLDTFAVNNMIRCYTRVNRIQEALD 1069
Query: 66 LFDKIKQSGLTPDAVTY 82
L+ K+ G PD T+
Sbjct: 1070 LYSKMPYFGCHPDNCTF 1086
>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 947
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SYS+ + + G KA+ +YN + + NV N +L L R G FE +L ++ +
Sbjct: 396 SYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLM 455
Query: 71 KQSGLTPDAVTYNTV 85
+ G+TPD V+Y T+
Sbjct: 456 LKRGVTPDEVSYCTL 470
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 37/75 (49%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y + I GN A + + + N+ N +++ L ++G + + KLFDK+
Sbjct: 746 TYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKL 805
Query: 71 KQSGLTPDAVTYNTV 85
GL P+ ++YN +
Sbjct: 806 HLKGLAPNVISYNIL 820
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 45/78 (57%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I +Y++ I L K+GN +A ++++ + + NV N+++ +NG +L L
Sbjct: 778 NIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLR 837
Query: 68 DKIKQSGLTPDAVTYNTV 85
+K+ + G++P +TY+ +
Sbjct: 838 NKMLKEGISPSLITYSAL 855
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY + + L K G +AL ++N I + + N +++ + K + + F+++
Sbjct: 466 SYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRM 525
Query: 71 KQSGLTPDAVTYNTV 85
K+ G PD VTY T+
Sbjct: 526 KELGFEPDGVTYRTL 540
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 40/76 (52%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K S + + +K + G AL +++++ ++ CN +LS LVR G+ +++
Sbjct: 145 KFSPTVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAIL 204
Query: 66 LFDKIKQSGLTPDAVT 81
++D I + G+ PD T
Sbjct: 205 VYDHINRLGIVPDVFT 220
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 43/75 (57%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I + G +A EI NS+ D+ K ++F N I++ L + G++ + + ++
Sbjct: 3 TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62
Query: 71 KQSGLTPDAVTYNTV 85
GL+PD TYNT+
Sbjct: 63 LNIGLSPDTTTYNTL 77
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 38/65 (58%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
+NGN L+AL+I + + ++ ++V N IL+ L + + KLFD++ + G PD
Sbjct: 153 RNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFY 212
Query: 81 TYNTV 85
T+ T+
Sbjct: 213 TFTTL 217
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 40/72 (55%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
++++ I ++GN KAL ++ ++T + K ++ N ++ + G+ E + +L+D +
Sbjct: 213 TFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGM 272
Query: 71 KQSGLTPDAVTY 82
+ P+ +TY
Sbjct: 273 ISRKIFPNHITY 284
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 43/74 (58%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I L K+G + +A +++S+ K N N +++ L ++GK + + K +K+
Sbjct: 289 TYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKM 348
Query: 71 KQSGLTPDAVTYNT 84
+G TPD TY++
Sbjct: 349 VSAGCTPDTYTYSS 362
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
K G AL + + K NV+ N ++ GK ++ L +K++ G+ PDAV
Sbjct: 194 KEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAV 253
Query: 81 TYN 83
TYN
Sbjct: 254 TYN 256
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 27/38 (71%)
Query: 48 NLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
N +++ L ++G+ + + LFD ++ G+ P+AVT+N++
Sbjct: 291 NALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSL 328
>gi|255661028|gb|ACU25683.1| pentatricopeptide repeat-containing protein [Citharexylum
montevidense]
Length = 376
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 45/84 (53%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ G +YS+ I L K G KA+ + N + + K N + N +++ L+ KFE
Sbjct: 122 QEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKFE 181
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
++++F ++ +P VTYNT+
Sbjct: 182 DAIRVFKELGTRHCSPTIVTYNTL 205
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 44/80 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +YS IK L ++ AL+++N + + K +V + N+++ L GK E + +L+
Sbjct: 233 SVITYSLLIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELY 292
Query: 68 DKIKQSGLTPDAVTYNTVYQ 87
+ P+ VTYNT+ +
Sbjct: 293 FDMNHWNCAPNLVTYNTLME 312
Score = 34.7 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 38/76 (50%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y + KNG + K+L + E ++ F + ++S L + GK + ++ + +
Sbjct: 95 TTYGILVHGFCKNGYNNKSLHVLEIAKQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNG 154
Query: 70 IKQSGLTPDAVTYNTV 85
+ +SG P+ YN +
Sbjct: 155 MIESGCKPNTQVYNAL 170
>gi|255660932|gb|ACU25635.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 484
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I SY + K + + G + A +N + E + N+++ +GK E++ + F
Sbjct: 114 TIKSYDALFKVISRRGRYMMAKRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKVETANRFF 173
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ +K +TPD +TYNT+
Sbjct: 174 EDMKNREITPDVITYNTM 191
>gi|449440241|ref|XP_004137893.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
mitochondrial-like [Cucumis sativus]
gi|449483740|ref|XP_004156675.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
mitochondrial-like [Cucumis sativus]
Length = 491
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+Q G ++ YS+ IKF G A+++ N + + K ++ ++L+ ++ +G
Sbjct: 242 MRQKGFCPAVVDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTMVLNGVIADGD 301
Query: 60 FESSLKLFDKIKQSGLTPDAVTYN 83
++ + +LFD++ GL PD TYN
Sbjct: 302 YKMADELFDELLLFGLVPDIYTYN 325
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 39/74 (52%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y+ YI L K G+S+ L++ + + NV N+IL L + G+ + + KL
Sbjct: 321 IYTYNVYIHGLCKQGDSVAGLQMIPHMEALGCQPNVITYNVILKSLCKTGELDEARKLRS 380
Query: 69 KIKQSGLTPDAVTY 82
K++ GL + T+
Sbjct: 381 KMQLKGLAENLRTF 394
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESS--LKLF 67
S++ I L K A+E++N + E +N IC+LIL+ L + K L
Sbjct: 180 STFQILITALCKVNKVGHAMELFNYMITEGYGLNPQICSLILASLCQQKKSSGDVVLGFL 239
Query: 68 DKIKQSGLTPDAVTYNTV 85
++++Q G P V Y+ V
Sbjct: 240 EEMRQKGFCPAVVDYSNV 257
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G + ++Y++ I K GN ++A E+ + + E N++ N I+ L + G
Sbjct: 391 MQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGS 450
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQSDH 90
+ + +L +K+ GL D VTY T+ S H
Sbjct: 451 LDEAYRLLNKVSVHGLQADGVTY-TILMSVH 480
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 39/78 (50%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I +Y++ I L K G+ +A + N ++ + + +++S R SL F
Sbjct: 434 NIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFF 493
Query: 68 DKIKQSGLTPDAVTYNTV 85
+K+ + G TPD +Y T+
Sbjct: 494 NKMLKVGFTPDIHSYTTL 511
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I+ K+ +A++++ +T K ++F N +L GK E + L D++
Sbjct: 504 TYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQM 563
Query: 71 KQSGLTPDAVTYNTV 85
K GL PD V+Y T+
Sbjct: 564 KTEGLQPDIVSYGTI 578
Score = 40.8 bits (94), Expect = 0.098, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ IK L K G E+ + + V N+++ L ++G+ E + +L ++
Sbjct: 223 SYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 282
Query: 71 KQSGLTPDAVTY 82
+Q G+TP VT+
Sbjct: 283 EQGGMTPSVVTF 294
Score = 40.8 bits (94), Expect = 0.100, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G + I SY + I K + KA E + D K NVFI N ++ RNG
Sbjct: 563 MKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGD 622
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
++ + +K +G+ P VTY ++
Sbjct: 623 ISGAIDAVETMKSNGIQPTNVTYGSL 648
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 36/74 (48%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I+ K G ++A+ + + N ++ ++G E + KLFD++
Sbjct: 680 YTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMV 739
Query: 72 QSGLTPDAVTYNTV 85
SG+ PD +TY T+
Sbjct: 740 GSGVIPDNITYGTL 753
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESD-KVNVFICNLILSCLVRNGKFESSLKL 66
SI + +++++ L + G A E+++ + + + +N + ++ L + GK ++ ++
Sbjct: 184 SIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEM 243
Query: 67 FDKIKQSGLTPDAVTYNTV 85
++ ++GL P VTYN +
Sbjct: 244 LAELWRAGLQPTVVTYNVL 262
>gi|225460540|ref|XP_002272860.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61360
[Vitis vinifera]
gi|296081020|emb|CBI18524.3| unnamed protein product [Vitis vinifera]
Length = 513
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 51/80 (63%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ + ++ I G N +A E++N I+ + + ++ + N +S L+R+ + +S+L L
Sbjct: 289 TLETITTLIHGAGVAQNISRARELFNEISIRNLQPDIGVYNAFMSSLIRSREVQSALMLM 348
Query: 68 DKIKQSGLTPDAVTYNTVYQ 87
D++++ G+ D++TY+T+++
Sbjct: 349 DEMEEEGIGHDSMTYHTMFR 368
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G + ++Y++ I K GN ++A E+ + + E N++ N I+ L + G
Sbjct: 391 MQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGS 450
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQSDH 90
+ + +L +K+ GL D VTY T+ S H
Sbjct: 451 LDEAYRLLNKVSVHGLQADGVTY-TILMSVH 480
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 39/78 (50%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I +Y++ I L K G+ +A + N ++ + + +++S R SL F
Sbjct: 434 NIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFF 493
Query: 68 DKIKQSGLTPDAVTYNTV 85
+K+ + G TPD +Y T+
Sbjct: 494 NKMLKVGFTPDIHSYTTL 511
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 46/78 (58%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I L K G A +++ + + ++NV+ N+++S L + G + +L + K+
Sbjct: 397 TYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKM 456
Query: 71 KQSGLTPDAVTYNTVYQS 88
+++G PDAVT+ + +S
Sbjct: 457 EENGCIPDAVTFEIIIRS 474
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 41/78 (52%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +YS+ I G ++A + N + ++ NV+ +++ L + GK + + L
Sbjct: 184 NVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLL 243
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ + G+ P+ V+YNT+
Sbjct: 244 AVMTKEGVKPNVVSYNTL 261
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 34/75 (45%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YSS I K G AL++ + +V +L L +N + + LF K+
Sbjct: 327 TYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKM 386
Query: 71 KQSGLTPDAVTYNTV 85
K+ G+ P+ TY +
Sbjct: 387 KERGIQPNKYTYTAL 401
>gi|255660980|gb|ACU25659.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 376
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ G +YS+ I L K N +A+ + N + K N + N +++ LV KFE
Sbjct: 122 QKGGVLXAFAYSAMINGLCKEANLBRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFE 181
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
++++F ++ +P +TYNT+
Sbjct: 182 DAIRVFREMXTMHCSPTIITYNTL 205
Score = 37.4 bits (85), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 45/81 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+ +YS +K L + KAL+++N +T + K +V + N+++ L GK + +L L+
Sbjct: 233 GVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLY 292
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
+ + P+ V++NT+ +
Sbjct: 293 FDMNRWKCAPNLVSHNTLMEG 313
>gi|255569835|ref|XP_002525881.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534795|gb|EEF36485.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 913
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Query: 1 MQQHGKTS-ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G + Y++ I K GN LKA N + + KVN I IL CL G
Sbjct: 329 MEKEGMVPDMHCYTALICRFCKAGNLLKAYAFLNEMMSKGVKVNCVIVGSILHCLCELGM 388
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+ F++ K GL D V+YN V +
Sbjct: 389 HSEVVDQFNQFKSLGLFLDGVSYNNVVDA 417
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 43/80 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ Y++ I GN + A +++ + + +++V ++++S RNG +L L D
Sbjct: 443 VMHYTTLINGYCCQGNVVDAFKVFEEMRENGIEIDVVTYDVLVSGFCRNGLATEALNLLD 502
Query: 69 KIKQSGLTPDAVTYNTVYQS 88
++ L P+++TYN V +S
Sbjct: 503 YMQTQKLKPNSITYNVVVES 522
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 33/46 (71%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
++FICN +++ L++N K + +L ++ ++K+ GL+P+ TY V ++
Sbjct: 197 HIFICNFLMNSLIKNSKLDMALAVYKQLKRLGLSPNDYTYAIVIKA 242
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 37/85 (43%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+ H K I S G N + AL I+ + D K +V +++ +
Sbjct: 693 LDGHHKAHIKKVYSAANAKGGNEDIFDALAIWTEMKDTEIKPDVIFYTVLIDGYCKVDSL 752
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
++ +FD++ + GL PD +TY +
Sbjct: 753 HDAIGVFDEMIERGLEPDIITYTAL 777
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILS--CLVRNGKFESS 63
+ +I+ +SS I L G + A +++N + D+ ++F N ++ CLV GK + +
Sbjct: 550 RPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLV--GKMDKA 607
Query: 64 LKLFDKIKQSGLTPDAVTYNTV 85
+ D + +G PD VTY+T+
Sbjct: 608 FGVLDAMVSAGTEPDVVTYSTL 629
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 43/78 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
SIS+Y+ ++ L +N + +A+ +++ + + K + I N ++ L + + E + LF
Sbjct: 692 SISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLF 751
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ SGL P+A TY +
Sbjct: 752 ASVSASGLVPNASTYGVM 769
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 41/80 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K I SYS + G + +++S+TD + N++++ + G + +L
Sbjct: 409 KPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALL 468
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F +++ G++P+ VTY TV
Sbjct: 469 IFTEMRGQGVSPNVVTYATV 488
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITD-ESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
SY++ IK L S +AL++ +T + +V +++ L G+ + LF++
Sbjct: 238 SYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNE 297
Query: 70 IKQSGLTPDAVTYNTVYQS 88
+ Q G+ P+ VTYN++ +
Sbjct: 298 MVQKGVVPNVVTYNSIVHA 316
Score = 34.7 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 40/77 (51%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +++S + L K+ S +A EI++SI + K ++ +++L G+F LF
Sbjct: 377 IVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFH 436
Query: 69 KIKQSGLTPDAVTYNTV 85
+ +G+ D+ +N +
Sbjct: 437 SMTDNGIVADSHCFNIL 453
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 43/75 (57%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS+ I K +A+E++ K +V + + +++ L +NG +S++ L D++
Sbjct: 470 TYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEM 529
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ P+ VTYN++
Sbjct: 530 TKEGIRPNVVTYNSI 544
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 41/73 (56%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
S+ I LG+ G A ++ + E VF + ++S ++G F+ ++K+F+ +K
Sbjct: 191 SAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKV 250
Query: 73 SGLTPDAVTYNTV 85
SGL P+ VTYN V
Sbjct: 251 SGLKPNLVTYNAV 263
Score = 37.7 bits (86), Expect = 0.93, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 6 KTSISSYSSYIKFLGKNGNSLK-ALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
K ++ +Y++ I GK G K +EI+ + + + N +L+ R G +E++
Sbjct: 254 KPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAAR 313
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
LF+++ G+ D TYNT+
Sbjct: 314 NLFNEMIDRGIDQDVFTYNTL 334
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ + K G AL++ + K +V N +L + GKF ++F ++
Sbjct: 400 SYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEM 459
Query: 71 KQSGLTPDAVTYNTV 85
K+ + P+ +TY+T+
Sbjct: 460 KKDRVFPNLLTYSTL 474
>gi|18057130|gb|AAL58153.1|AC093093_26 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 704
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 46/82 (56%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ ++ SY++ +K L G +A E++ + E + + +++ L GKFE++++
Sbjct: 517 RPTLVSYTACVKILFDAGRPAEAREVFQEMVAEGLRPSCKTYTVLIEHLANVGKFEATME 576
Query: 66 LFDKIKQSGLTPDAVTYNTVYQ 87
+ DK++++G+ PD N + Q
Sbjct: 577 IMDKMQEAGVEPDKALCNILVQ 598
>gi|357141094|ref|XP_003572081.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Brachypodium distachyon]
Length = 541
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 44/80 (55%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
++++ SY + IK L + KA + + + ++ + N+ CN I+ L G+F+ + K
Sbjct: 220 RSTVVSYGTLIKALCMMQHPDKAASLLDEMREQGIEANLLTCNPIVYSLALAGRFQDAYK 279
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L +K G+ P+ T+N++
Sbjct: 280 LLEKFPLYGVAPNISTFNSL 299
>gi|222612685|gb|EEE50817.1| hypothetical protein OsJ_31213 [Oryza sativa Japonica Group]
Length = 522
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 46/82 (56%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ ++ SY++ +K L G +A E++ + E + + +++ L GKFE++++
Sbjct: 172 RPTLVSYTACVKILFDAGRPAEAREVFQEMVAEGLRPSCKTYTVLIEHLANVGKFEATME 231
Query: 66 LFDKIKQSGLTPDAVTYNTVYQ 87
+ DK++++G+ PD N + Q
Sbjct: 232 IMDKMQEAGVEPDKALCNILVQ 253
>gi|218184371|gb|EEC66798.1| hypothetical protein OsI_33201 [Oryza sativa Indica Group]
Length = 520
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 46/82 (56%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ ++ SY++ +K L G +A E++ + E + + +++ L GKFE++++
Sbjct: 170 RPTLVSYTACVKILFDAGRPAEAREVFQEMVAEGLRPSCKTYTVLIEHLANVGKFEATME 229
Query: 66 LFDKIKQSGLTPDAVTYNTVYQ 87
+ DK++++G+ PD N + Q
Sbjct: 230 IMDKMQEAGVEPDKALCNILVQ 251
>gi|168052517|ref|XP_001778696.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669911|gb|EDQ56489.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 799
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 36/114 (31%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDE----------------------------- 38
S SSY++ I G +G KALEI +TD
Sbjct: 158 SRSSYNNLINACGSSGQWFKALEICKRMTDNGVGPDLMTYNIILSAFKSGGQPRHAVAYY 217
Query: 39 ----SDKVNV--FICNLILSCLVRNGKFESSLKLFDKI-KQSGLTPDAVTYNTV 85
S KV + + N+IL+CL + G+FE ++ LF ++ K +G PD VT+N +
Sbjct: 218 DHLISKKVPLDRYSHNIILNCLTKLGRFEDAINLFKEMRKMNGCEPDVVTFNAL 271
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 42/80 (52%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ SYSS + GK G KA E+++ + S K N+ N ++ GK+E + +L
Sbjct: 335 VVSYSSLLNAFGKAGYPEKAQEVFDLMKQRSRKPNLVTFNGLMDAYASAGKYERARELLH 394
Query: 69 KIKQSGLTPDAVTYNTVYQS 88
+ ++ + P+ VT +++ +
Sbjct: 395 DMAEARIEPNVVTICSLFAA 414
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 37/70 (52%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGL 75
I G G+ +A +Y+ + D + V C+ +++ ++G + + +FD ++++G
Sbjct: 482 INAAGSLGDYREARTLYDKMVDLGIPLTVEPCSALINAFAKHGMYNEARTIFDDMRKAGC 541
Query: 76 TPDAVTYNTV 85
+ VTY ++
Sbjct: 542 KANVVTYTSL 551
>gi|115481668|ref|NP_001064427.1| Os10g0358700 [Oryza sativa Japonica Group]
gi|110288952|gb|AAP53278.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|110288953|gb|ABG66030.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113639036|dbj|BAF26341.1| Os10g0358700 [Oryza sativa Japonica Group]
gi|215712262|dbj|BAG94389.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215715192|dbj|BAG94943.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 548
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 46/82 (56%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ ++ SY++ +K L G +A E++ + E + + +++ L GKFE++++
Sbjct: 170 RPTLVSYTACVKILFDAGRPAEAREVFQEMVAEGLRPSCKTYTVLIEHLANVGKFEATME 229
Query: 66 LFDKIKQSGLTPDAVTYNTVYQ 87
+ DK++++G+ PD N + Q
Sbjct: 230 IMDKMQEAGVEPDKALCNILVQ 251
>gi|356513749|ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like [Glycine max]
Length = 819
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
YSS I K+ N L+AL +++ + K N + + IL CL G + F ++K
Sbjct: 338 YSSLIHGYCKSHNLLRALALHDEMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELK 397
Query: 72 QSGLTPDAVTYNTVYQS 88
+SG+ D V YN V+ +
Sbjct: 398 ESGMFLDGVAYNIVFDA 414
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+V CN + + LV +G+ + +L +++++K+ G P+ TY V ++
Sbjct: 194 DVLTCNFLFNRLVEHGEVDKALAVYEQLKRFGFIPNCYTYAIVIKA 239
>gi|357521009|ref|XP_003630793.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524815|gb|AET05269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 584
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ S + + L + G +A+ I+NS+T+E K + +++ L R +F S L
Sbjct: 42 TVISRTKLMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLL 101
Query: 68 DKIKQSGLTPDAVTYNTV 85
K++++G+ PD++ +N +
Sbjct: 102 SKVEENGVKPDSILFNAM 119
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 1 MQQHG-KTSISSYSSYIK---FLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVR 56
M++ G K + S++++ IK +G+ ++K LE+ I D + K N N+++
Sbjct: 139 MKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEMM--IQDGNVKPNERTYNILIQAWCT 196
Query: 57 NGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+ E + + K+ SG+ PD VTYNT+ ++
Sbjct: 197 KNELEEAWNVMHKMVNSGMQPDIVTYNTLARA 228
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ I +YS K + G KA + NS+T + NV I I+S GK + +L+
Sbjct: 358 EPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISGWCAAGKMDCALR 417
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L++K+ + G + TY T+
Sbjct: 418 LYEKMNEMGTPLNLKTYETL 437
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 2 QQHGKTSISSYSSYIKFLG--KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
++ K +I +Y++ + L K NS+ +L + + + K + + N +++ +GK
Sbjct: 71 EEGHKPTIITYTTLVAALTRLKRFNSIPSL--LSKVEENGVKPDSILFNAMINAFSDSGK 128
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
++K+F K+K+ G P T+NT+
Sbjct: 129 VHEAMKIFRKMKECGCKPTTSTFNTL 154
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y + I K GN KALEI + + +V ++ + L + G+ + +L + +
Sbjct: 1301 TYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETM 1360
Query: 71 KQSGLTPDAVTYNTVYQ 87
++GL PD VTYNT+ +
Sbjct: 1361 LRAGLVPDTVTYNTLLK 1377
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 1 MQQHGKT--SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNG 58
M++ G + +YS+ + L K+G A + + + NV + +L L + G
Sbjct: 938 MEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAG 997
Query: 59 KFESSLKLFDKIKQSGLTPDAVTYNTV 85
K + + L ++ +SG +P+ VTYNT+
Sbjct: 998 KLDEATALLQRMTRSGCSPNIVTYNTI 1024
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 37/75 (49%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I L K+ A+ + + D NVF N +L + + E++L L +++
Sbjct: 232 TYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQM 291
Query: 71 KQSGLTPDAVTYNTV 85
G PD V+Y TV
Sbjct: 292 VTRGCPPDVVSYTTV 306
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 42/85 (49%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+Q+ + ++ +Y + + + G+ A+E+ +T+ + N N I+ R
Sbjct: 327 IQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDM 386
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
E + ++ + Q+G PDA+ Y+T+
Sbjct: 387 ERAHQVLQMMIQTGCPPDAINYSTI 411
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+++ I L + G+ A E+ + NV + N+++ L K +S+L+LF ++
Sbjct: 879 TFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEM 938
Query: 71 KQSG-LTPDAVTYNTVYQS 88
++SG PD TY+T+ S
Sbjct: 939 EESGSCPPDVFTYSTIVDS 957
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 38/74 (51%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +YS+ I L K G KA +++ + N+ N ++ L + K E + ++ +
Sbjct: 580 VVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLE 639
Query: 69 KIKQSGLTPDAVTY 82
+++ TPD++TY
Sbjct: 640 IMRKQSCTPDSITY 653
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 39/80 (48%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ ++ +Y+ + K G + A+ + + ++ N+F N +L + + E + +
Sbjct: 1050 QPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQ 1109
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L + Q G P+ V+YNTV
Sbjct: 1110 LLSSMIQKGCVPNVVSYNTV 1129
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 28 ALEIYNSITDE-SDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
ALE++ + + S +VF + I+ LV++GK + + +L + + G +P+ VTY+++
Sbjct: 931 ALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSL 989
Score = 34.7 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 37/77 (48%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ SY++ I L K +A + + + + NV ++ R G + +++L
Sbjct: 300 VVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVR 359
Query: 69 KIKQSGLTPDAVTYNTV 85
K+ + G P+A+TYN +
Sbjct: 360 KMTERGYRPNAITYNNI 376
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 42/78 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ SY++ I L K + + + + + ++ N I+ + + + + + +LF
Sbjct: 1122 NVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELF 1181
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ I++SG TP+ VTYN++
Sbjct: 1182 NLIQESGCTPNLVTYNSL 1199
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 43/75 (57%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS+ I K +A+E++ K +V + + +++ L +NG +S++ L D++
Sbjct: 470 TYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEM 529
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ P+ VTYN++
Sbjct: 530 TKEGIRPNVVTYNSI 544
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 41/73 (56%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
S+ I LG+ G A ++ + E VF + ++S ++G F+ ++K+F+ +K
Sbjct: 191 SAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKV 250
Query: 73 SGLTPDAVTYNTV 85
SGL P+ VTYN V
Sbjct: 251 SGLKPNLVTYNAV 263
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 6 KTSISSYSSYIKFLGKNGNSLK-ALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
K ++ +Y++ I GK G K +EI+ + + + N +L+ R G +E++
Sbjct: 254 KPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAAR 313
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
LF+++ G+ D TYNT+
Sbjct: 314 NLFNEMIDRGIDQDVFTYNTL 334
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ + K G AL++ + K +V N +L + GKF ++F ++
Sbjct: 400 SYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEM 459
Query: 71 KQSGLTPDAVTYNTV 85
K+ + P+ +TY+T+
Sbjct: 460 KKDRVFPNLLTYSTL 474
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 1 MQQHGKTS-ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M Q G T + +Y++ L KNG A E+ + ++ + + NV+ N I++ L + G
Sbjct: 443 MVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGN 502
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
E ++KL +++ +G PD +TY T+ +
Sbjct: 503 IEQTVKLMEEMDLAGFYPDTITYTTLMDA 531
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I K G +A ++N + + NV + L +NG+ + + +L ++
Sbjct: 419 TYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEM 478
Query: 71 KQSGLTPDAVTYNTV 85
+ GL P+ TYNT+
Sbjct: 479 SRKGLQPNVYTYNTI 493
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 39/74 (52%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ I L KNG ++A ++ + + + ++S + G ++ KLFD+++
Sbjct: 315 YNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMR 374
Query: 72 QSGLTPDAVTYNTV 85
+ + PD VTY +V
Sbjct: 375 RKKIVPDIVTYTSV 388
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y+S I + K+G ++A E++N + + + + ++ + G+ + + + +
Sbjct: 382 IVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHN 441
Query: 69 KIKQSGLTPDAVTYNTV 85
++ Q GLTP+ VTY +
Sbjct: 442 QMVQKGLTPNVVTYTAL 458
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G ++++YS I K+G+ + A E +N + + NV ++ L +N
Sbjct: 375 MQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSM 434
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNT 84
F+ + L +K+ G TP+ +T+NT
Sbjct: 435 FDQANSLVEKMTLEGCTPNTITFNT 459
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+++++IK L NG A+++ + N+ N +L L R K+E + LF +I
Sbjct: 456 TFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEI 515
Query: 71 KQSGLTPDAVTYNTV 85
+ L P+ VTYNTV
Sbjct: 516 EARNLQPNLVTYNTV 530
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 31 IYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+Y ++ + NVF N++L L +N + +++ KLF ++ G PDAVTY T+ S
Sbjct: 166 LYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSS 223
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ HG +I++Y+ + L + +A ++ I + + N+ N +L R G
Sbjct: 480 MQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGM 539
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+L+LF K G PD++TYNT+ +
Sbjct: 540 MGEALQLFGKALVRGTAPDSITYNTMIHA 568
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 43/78 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I +++ IK G +AL+++ + + + NV N ++ L NG E +L++
Sbjct: 313 NIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVC 372
Query: 68 DKIKQSGLTPDAVTYNTV 85
D++++SG P+ TY+ +
Sbjct: 373 DQMQRSGCLPNVTTYSIL 390
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M HG + ++ +Y+ + L KN +A + +T E N N + L NG+
Sbjct: 410 MISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGR 469
Query: 60 FESSLKLFDKIKQSGLTPDAVTYN 83
E ++KL ++++ G P+ TYN
Sbjct: 470 VEWAMKLLERMQGHGCLPNITTYN 493
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 37/66 (56%)
Query: 23 GNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTY 82
G++ +AL+++ I + K V I N +L L+ KF+ L+ +K+ GL P+ TY
Sbjct: 123 GSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTY 182
Query: 83 NTVYQS 88
N + ++
Sbjct: 183 NILLKA 188
>gi|356574085|ref|XP_003555182.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20740-like [Glycine max]
Length = 733
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
MQ+ G I+ S + L + + ALE + + E V+V I N+ + L + G+
Sbjct: 471 MQKLGFPVIADLSKFFSVLVEKKGPIMALETFGQLK-EKGHVSVEIYNIFMDSLHKIGEV 529
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNT 84
+ +L LFD++K L PD+ TY T
Sbjct: 530 KKALSLFDEMKGLSLKPDSFTYCT 553
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDE-SDKVNVFICNLILSCLVRNG 58
M+ GK S + I+ L+ +Y + ++ K VF+ N ++ LVR G
Sbjct: 190 MESQGKPPSEKQFEILIRMHSDANRGLRVYHVYEKMRNKFGVKPRVFLYNRVMDALVRTG 249
Query: 59 KFESSLKLFDKIKQSGLTPDAVTY 82
+ +L ++D +K+ GL ++VT+
Sbjct: 250 HLDLALSVYDDLKEDGLVEESVTF 273
Score = 34.3 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFI-CNLILSCLVRNGK 59
+++ G S+ Y+ ++ L K G KAL +++ + S K + F C IL CLV G+
Sbjct: 505 LKEKGHVSVEIYNIFMDSLHKIGEVKKALSLFDEMKGLSLKPDSFTYCTAIL-CLVDLGE 563
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + ++I + P Y+++
Sbjct: 564 IKEACACHNRIIEMSCIPSVAAYSSL 589
>gi|255660930|gb|ACU25634.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 484
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G + +I SY + K + + G + + +N + +E + N+++ +GK
Sbjct: 106 MEELGVERTIKSYDALFKVISRRGRYMMSKRYFNKMVNEGIEPTRHTFNVLIWGFFLSGK 165
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E++ + F+ +K +TPD +TYNT+
Sbjct: 166 VETANRFFEDMKSREITPDVITYNTM 191
>gi|147789025|emb|CAN75780.1| hypothetical protein VITISV_012424 [Vitis vinifera]
Length = 515
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 51/80 (63%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ + ++ I G N +A E++N I+ + + ++ + N +S L+R+ + +S+L L
Sbjct: 289 TLETITTLIHGAGVAQNISRARELFNEISIRNLQPDIGVYNAFMSSLIRSREVQSALMLM 348
Query: 68 DKIKQSGLTPDAVTYNTVYQ 87
D++++ G+ D++TY+T+++
Sbjct: 349 DEMEEEGIGHDSMTYHTMFR 368
>gi|357500143|ref|XP_003620360.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495375|gb|AES76578.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 426
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS+ I LGK G ++ + + NV + +L+ L ++G F++++++F KI
Sbjct: 278 TYSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKI 337
Query: 71 KQSGLTPDAVTYNTV 85
K G P+ VTYN +
Sbjct: 338 KDKGFEPNMVTYNIL 352
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTS-ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G+++ + +YSS + L K+G+ A+ I+ I D+ + N+ N+++ L +NG+
Sbjct: 302 MRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGR 361
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + ++F + G D Y +
Sbjct: 362 LKDAQEIFHDLLIKGYRLDVRLYTVM 387
>gi|255660990|gb|ACU25664.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 376
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ G +YS+ I L K N +A+ + N + K N + N +++ LV KFE
Sbjct: 122 QKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFE 181
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
++++F ++ +P +TYNT+
Sbjct: 182 DAIRVFREMGTMHCSPTIITYNTL 205
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 45/81 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+ +YS +K L + KAL+++N +T + K +V + N+++ L GK + +L L+
Sbjct: 233 GVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLY 292
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
+ + P+ V++NT+ +
Sbjct: 293 FDMNRWKCAPNLVSHNTLMEG 313
>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
Length = 967
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 39/67 (58%)
Query: 19 LGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPD 78
L ++GN +A+++Y + + F CN+++S L R+GK + K + + GL P+
Sbjct: 406 LNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPN 465
Query: 79 AVTYNTV 85
++TY+ +
Sbjct: 466 SITYDCI 472
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S +Y S +K L K GN ++A + N + V+ + N +L+ ++G ++ LF
Sbjct: 500 SFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALF 559
Query: 68 DKIKQSGLTPDAVTYNTV 85
DK+ Q+ + PD+ TY+++
Sbjct: 560 DKMVQNNVLPDSYTYSSL 577
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 41/80 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + +Y+ +I L N S KA + + E N N +++ V+ GK + +
Sbjct: 300 EADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQ 359
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F+++ + L+P+ VTYN +
Sbjct: 360 VFNEMSKFDLSPNCVTYNAL 379
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 39/76 (51%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
S + I+ K G A+E + + K +V+ CN+IL+ +V++ + E LF +
Sbjct: 164 SVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFRE 223
Query: 70 IKQSGLTPDAVTYNTV 85
+ G+ P+ T+N +
Sbjct: 224 MSDKGICPNVGTFNIL 239
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+++G +I +Y++ + + K G A+E+ + + + + +V N+ + L N +
Sbjct: 259 MEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHR 318
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ L K+++ ++P+ VTYNT+
Sbjct: 319 SAKAYLLLKKMRKEMISPNEVTYNTL 344
>gi|297719649|ref|NP_001172186.1| Os01g0151900 [Oryza sativa Japonica Group]
gi|9663979|dbj|BAB03620.1| hypothetical protein [Oryza sativa Japonica Group]
gi|13872936|dbj|BAB44041.1| hypothetical protein [Oryza sativa Japonica Group]
gi|215768885|dbj|BAH01114.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255672883|dbj|BAH90916.1| Os01g0151900 [Oryza sativa Japonica Group]
Length = 534
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 43/80 (53%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y ++I L K+G A++++ S+ ++ +V ICN I+ L + +L+
Sbjct: 284 KPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKRIPEALE 343
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F ++ G D TYNT+
Sbjct: 344 IFGEMNDRGCQADVATYNTL 363
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 23 GNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTY 82
G+ A ++N I K ++F ++ L ++GK +++KLF + + G+ PD
Sbjct: 266 GSLADAKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAIC 325
Query: 83 NTV 85
N +
Sbjct: 326 NCI 328
>gi|359490014|ref|XP_002275213.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Vitis vinifera]
Length = 494
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 42/76 (55%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
YS I NG KA+EI I + ++ I N I+ + G+ +L++F+K++
Sbjct: 166 YSKVIGVYRDNGMWKKAMEIVREIREMGVSLDKRIYNSIIDTFGKCGELSEALEVFEKMQ 225
Query: 72 QSGLTPDAVTYNTVYQ 87
+ G+ PD +T+N++ Q
Sbjct: 226 EEGVKPDIMTWNSLIQ 241
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+S I GK G +ALE++ + +E K ++ N ++ + G +L+LF K++
Sbjct: 201 YNSIIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALELFSKMQ 260
Query: 72 QSGLTPDAVTYNTV 85
+ GL PD + T+
Sbjct: 261 EEGLYPDPKIFITI 274
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 34/63 (53%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGL 75
I G G L+AL +Y+ I D +V + ++ +R KF+ +++++++ +G
Sbjct: 380 INAFGIAGRHLEALSVYHHIKDTGISPDVVTYSTLMKACIRARKFDKVPEIYEEMESAGC 439
Query: 76 TPD 78
TPD
Sbjct: 440 TPD 442
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 42/78 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ SY++ I+ LG G +L+A I+ + K+++ + N++L +R G E + K+
Sbjct: 57 SLGSYTTVIEALGSVGRTLEAEAIFREMVHLGLKLDLRVYNVMLRSCLRKGLLELADKVL 116
Query: 68 DKIKQSGLTPDAVTYNTV 85
++ G+ + TY +
Sbjct: 117 AEMDALGIGRNRATYEAL 134
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 37/62 (59%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVY 86
+ +++ + E + N+ + N++++ G+ +L ++ IK +G++PD VTY+T+
Sbjct: 356 QTVKVLQLMETEGIEPNLIMLNMLINAFGIAGRHLEALSVYHHIKDTGISPDVVTYSTLM 415
Query: 87 QS 88
++
Sbjct: 416 KA 417
>gi|147778635|emb|CAN76113.1| hypothetical protein VITISV_005528 [Vitis vinifera]
Length = 466
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 42/76 (55%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
YS I NG KA+EI I + ++ I N I+ + G+ +L++F+K++
Sbjct: 185 YSKVIGVYRDNGMWKKAMEIVREIREMGVSLDKRIYNSIIDTFGKCGELSEALEVFEKMQ 244
Query: 72 QSGLTPDAVTYNTVYQ 87
+ G+ PD +T+N++ Q
Sbjct: 245 EEGVKPDIMTWNSLIQ 260
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+S I GK G +ALE++ + +E K ++ N ++ + G +L+LF K++
Sbjct: 220 YNSIIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALELFSKMQ 279
Query: 72 QSGLTPDAVTYNTV 85
+ GL PD + T+
Sbjct: 280 EEGLYPDPKIFITI 293
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 42/78 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ SY++ I+ LG G +L+A I+ + K+++ + N++L +R G E + K+
Sbjct: 76 SLGSYTTVIEALGSVGRTLEAEAIFREMVHLGLKLDLRVYNVMLRSCLRKGLLELADKVL 135
Query: 68 DKIKQSGLTPDAVTYNTV 85
++ G+ + TY +
Sbjct: 136 AEMDALGIGRNRATYEAL 153
>gi|224115616|ref|XP_002332100.1| predicted protein [Populus trichocarpa]
gi|222874920|gb|EEF12051.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
++ I F GK G A+ +YN + + V N I+S L NG+ E +L +F K+K
Sbjct: 267 TTLIDFYGKVGCLSNAIRVYNQMMVK----KVCTWNAIISSLANNGREEQALDMFKKMKG 322
Query: 73 SGLTPDAVTYNTV 85
GL P+ VT+ V
Sbjct: 323 EGLCPNEVTFIAV 335
>gi|125524449|gb|EAY72563.1| hypothetical protein OsI_00429 [Oryza sativa Indica Group]
Length = 535
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 43/80 (53%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y ++I L K+G A++++ S+ ++ +V ICN I+ L + +L+
Sbjct: 284 KPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKRIPEALE 343
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F ++ G D TYNT+
Sbjct: 344 IFGEMNDRGCQADVATYNTL 363
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 23 GNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTY 82
G+ A ++N I K ++F ++ L ++GK +++KLF + + G+ PD
Sbjct: 266 GSLADAKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAIC 325
Query: 83 NTV 85
N +
Sbjct: 326 NCI 328
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 45/75 (60%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y + + K+GN+ AL+++ + + S K +V ++++ L ++G + +L LF+++
Sbjct: 211 TYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEM 270
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ D V Y+++
Sbjct: 271 EMKGIKADVVAYSSI 285
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 38/78 (48%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +Y + L NG KALEI+ + + + I N+I+ + K + + LF
Sbjct: 453 SVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLF 512
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ G+ PD +TYN +
Sbjct: 513 CSLSVKGVKPDVLTYNVM 530
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 42/80 (52%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K S+ YS I L K+GN AL ++N + + K +V + I+ L +G+++ K
Sbjct: 241 KASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAK 300
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+ ++ + P+ VT++ +
Sbjct: 301 MLREMIGRNIIPNVVTFSAL 320
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 41/77 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YSS I K +A ++ + + + + N+ +++++ + + ++ ++LF +I
Sbjct: 351 TYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEI 410
Query: 71 KQSGLTPDAVTYNTVYQ 87
GL D VTYNT+ Q
Sbjct: 411 SSKGLVADTVTYNTLVQ 427
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 41/81 (50%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S ++Y+S + + G+ K I I + + + N ++ R G+ + + +LF
Sbjct: 633 STATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLF 692
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
++K SGL PD VTYN +S
Sbjct: 693 SEMKSSGLIPDIVTYNIFVKS 713
Score = 41.6 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 39/77 (50%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ I L + G A+ Y+ + K N+ N ++ GKF + +FD
Sbjct: 354 VITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFD 413
Query: 69 KIKQSGLTPDAVTYNTV 85
++ +G PD VT+NT+
Sbjct: 414 DLRSAGFVPDVVTWNTL 430
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 35/55 (63%)
Query: 31 IYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +S+ ++ ++ + N ++SC R ++ + K+FD+++ +G PD VT+N++
Sbjct: 236 LVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSL 290
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 42/78 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y S I + G +++EIY + + ++ N +LS L R G++E + KLF ++
Sbjct: 461 TYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEM 520
Query: 71 KQSGLTPDAVTYNTVYQS 88
+ PD ++Y+++ +
Sbjct: 521 ENLDCRPDELSYSSLLHA 538
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 43/78 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +Y+S I K+G +A E+ + + + +V ++S L R GK ++++ +
Sbjct: 318 SVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTLISGLDRAGKIDAAIGTY 377
Query: 68 DKIKQSGLTPDAVTYNTV 85
D++ ++G P+ TYN +
Sbjct: 378 DEMLRNGCKPNLCTYNAL 395
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 36/77 (46%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ I G+ G +A +++ + ++ N+ + V N FE ++ L +
Sbjct: 671 SYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEAIDLVRYM 730
Query: 71 KQSGLTPDAVTYNTVYQ 87
G P+ TYN++ Q
Sbjct: 731 VTRGCKPNERTYNSILQ 747
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G T +I ++ S I+ L + + KAL+I++ + D K + F+ +++ L + K
Sbjct: 78 MKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINK 137
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+ + F+++ QSG PD VTY + S
Sbjct: 138 LDLAASYFERMVQSGCLPDKVTYTVLVHS 166
>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1245
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 43/75 (57%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y S +K L K G+ + A + S+ + V+ +CN +++ + ++G + ++ LF ++
Sbjct: 580 TYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEM 639
Query: 71 KQSGLTPDAVTYNTV 85
Q + PD+ TY ++
Sbjct: 640 VQRSILPDSFTYTSL 654
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 45/78 (57%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I+S+++ + KNGN +ALE+ +++ K+++ N++++ L G + +LF
Sbjct: 963 TIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELF 1022
Query: 68 DKIKQSGLTPDAVTYNTV 85
+++K+ G + TY +
Sbjct: 1023 EEMKRDGFLANVTTYKAL 1040
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 48 NLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
N++++ L G F+ S L K+++SG P VTYNTV
Sbjct: 197 NILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTV 234
>gi|242077154|ref|XP_002448513.1| hypothetical protein SORBIDRAFT_06g028250 [Sorghum bicolor]
gi|241939696|gb|EES12841.1| hypothetical protein SORBIDRAFT_06g028250 [Sorghum bicolor]
Length = 718
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 45/85 (52%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
G+ + YS + L K G A+ +Y + +V+ + ++ LVR+GK ++ +
Sbjct: 228 GRAPVGVYSVMVDVLAKAGRLDAAMGMYREMVAVGHRVSTAVSTAMVEALVRSGKLDAGM 287
Query: 65 KLFDKIKQSGLTPDAVTYNTVYQSD 89
+L++++++ GL P Y V +++
Sbjct: 288 ELWEEMRRGGLRPSFGLYTMVVEAN 312
>gi|413950866|gb|AFW83515.1| hypothetical protein ZEAMMB73_465290 [Zea mays]
Length = 478
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 46/80 (57%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + SY++ I L + G +AL++++ + + V ++ L R G F+ +LK
Sbjct: 194 KPDVCSYNTIIDGLCRRGRLAEALDMFSEMVGKCIAPTVVTYTTVIHWLAREGCFDDALK 253
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F ++ + G++P+ VTY+++
Sbjct: 254 IFHEMGRRGVSPNLVTYSSL 273
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 37/72 (51%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +YSS I L K G + ALE+ + + E N+ + ++ L + ++++
Sbjct: 266 NLVTYSSLIDGLCKGGRATSALELLDRMIKEKKLPNMITYSSVIDGLCKEHMLSEAMEIL 325
Query: 68 DKIKQSGLTPDA 79
D+++ G PDA
Sbjct: 326 DRMRLQGRKPDA 337
>gi|226492629|ref|NP_001143148.1| uncharacterized protein LOC100275629 [Zea mays]
gi|195615066|gb|ACG29363.1| hypothetical protein [Zea mays]
Length = 478
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 46/80 (57%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + SY++ I L + G +AL++++ + + V ++ L R G F+ +LK
Sbjct: 194 KPDVCSYNTIIDGLCRRGRLAEALDMFSEMVGKCIAPTVVTYTTVIHWLAREGCFDDALK 253
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F ++ + G++P+ VTY+++
Sbjct: 254 IFHEMGRRGVSPNLVTYSSL 273
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 36/72 (50%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +YSS I L K G + ALE+ + + E N + ++ L + ++++
Sbjct: 266 NLVTYSSLIDGLCKGGRATSALELLDRMVKEKKLPNTITYSSVIDGLCKEHMLSEAMEVL 325
Query: 68 DKIKQSGLTPDA 79
D+++ G PDA
Sbjct: 326 DRMRLQGRKPDA 337
>gi|326487476|dbj|BAJ89722.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 805
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 34/54 (62%)
Query: 32 YNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + K ++ I N +LS +NG + ++++F+ I+Q GL+PD +TYN++
Sbjct: 592 FQEVKARGHKPDLVILNSMLSIYAKNGLYSKAMEMFESIEQLGLSPDLITYNSL 645
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ ++ GK GN +AL + + D K + N + R G ++ + K D
Sbjct: 289 VVTYNALLQVFGKAGNYTEALRVLREMEDAGCKPDAVTYNELAGSYARAGFYQEAAKCID 348
Query: 69 KIKQSGLTPDAVTYNTV 85
+ GL P+ TYNT+
Sbjct: 349 TMIGKGLLPNTFTYNTI 365
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 41 KVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
+++V +L L R G++E +L+LFD++++ G+ P VTYN V
Sbjct: 180 RLDVRAYTTVLHALSREGRYERALRLFDELRREGVAPTRVTYNVV 224
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 10/80 (12%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFI-----CNLILSCLVRNGKFESSLK 65
+Y++ + G G +AL +++ + K N FI NL+L L + +F + L+
Sbjct: 361 TYNTIMTAYGNAGKVDEALALFDRM-----KKNGFIPYTNTYNLVLGMLGKKSRFAAMLE 415
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+ ++ +SG TP+ VT+NT+
Sbjct: 416 MLGEMSRSGCTPNRVTWNTL 435
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 40/77 (51%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I G+ G+ A ++Y+ +T + N +L+ L R G + ++ + K+
Sbjct: 466 TYNTLICAYGRCGSRANAFKMYDEMTAAGFAPCLTTYNALLNVLSRQGDWTAARSIVSKM 525
Query: 71 KQSGLTPDAVTYNTVYQ 87
K G P+ ++Y+ + Q
Sbjct: 526 KSEGFKPNDMSYSLLLQ 542
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 37/76 (48%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
S+ I G++G +A+ + + V N +L + G + +L++ +++
Sbjct: 258 STVIAAAGRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLREMED 317
Query: 73 SGLTPDAVTYNTVYQS 88
+G PDAVTYN + S
Sbjct: 318 AGCKPDAVTYNELAGS 333
>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS IK G + +A +I + NVF +++++ + G+ E + ++FD++
Sbjct: 273 TYSVLIKGFCHGGKADRARKIMEFMRSNGCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEM 332
Query: 71 KQSGLTPDAVTYNTV 85
K SGL PD V Y T+
Sbjct: 333 KSSGLKPDTVGYTTL 347
>gi|125569053|gb|EAZ10568.1| hypothetical protein OsJ_00400 [Oryza sativa Japonica Group]
Length = 514
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 43/80 (53%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y ++I L K+G A++++ S+ ++ +V ICN I+ L + +L+
Sbjct: 264 KPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKRIPEALE 323
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F ++ G D TYNT+
Sbjct: 324 IFGEMNDRGCQADVATYNTL 343
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 23 GNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTY 82
G+ A ++N I K ++F ++ L ++GK +++KLF + + G+ PD
Sbjct: 246 GSLADAKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAIC 305
Query: 83 NTV 85
N +
Sbjct: 306 NCI 308
>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 870
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 44/78 (56%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ SY++++ L +NG L+ + + + + + N++ N+++ L RN + +L
Sbjct: 327 SLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLM 386
Query: 68 DKIKQSGLTPDAVTYNTV 85
D + +G+ PD VTY T+
Sbjct: 387 DLMVSNGVYPDTVTYTTL 404
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 45/78 (57%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +Y+ I L K G +++E++N + ++F + ++ L + G F ++ K+F
Sbjct: 254 SVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVF 313
Query: 68 DKIKQSGLTPDAVTYNTV 85
++ +SGL+PD TYN +
Sbjct: 314 QEMIESGLSPDVRTYNAM 331
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YSS + L K G +A+E+ + + K+N + N +++ VR K E ++ + ++
Sbjct: 431 AYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREM 490
Query: 71 KQSGLTPDAVTYNTV 85
K P V+YNT+
Sbjct: 491 KSKDCAPTVVSYNTI 505
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I SY + I L K+GN L A+E+++ ++ +V N+++ +R G F + +++
Sbjct: 184 ILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWK 243
Query: 69 K-IKQSGLTPDAVTYN 83
+ + +S + P TYN
Sbjct: 244 RLLTESSVYPSVETYN 259
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 35/60 (58%)
Query: 28 ALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
ALEI+ + + ++ N I+ L + G +LK++D+I ++GL PD ++YN ++
Sbjct: 588 ALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFK 647
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 44/82 (53%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +YS I L + AL +++ ++ K ++ + N+I+ L K + +L+
Sbjct: 531 KPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALE 590
Query: 66 LFDKIKQSGLTPDAVTYNTVYQ 87
+F +++Q PD VT+NT+ +
Sbjct: 591 IFTQMRQVNCVPDLVTHNTIME 612
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKV-NVFICNLILSCLVRNGKFESSLKLF 67
+ Y+ I + G+ +KA EI+ + ES +V N++++ L + GK + S++++
Sbjct: 219 VMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMW 278
Query: 68 DKIKQSGLTPDAVTYNTV 85
+++K++ +PD T++++
Sbjct: 279 NRMKKNEKSPDLFTFSSM 296
>gi|27545040|gb|AAO18446.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
gi|108711829|gb|ABF99624.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 863
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 16 IKFLGKNGNSL--KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQS 73
I LG+ G +L K LE+++ + ES + +++ RN E + +L D++K S
Sbjct: 141 IGVLGRQGPALLDKCLEVFHDLPSESRTALSYTS--LIAAYARNALHEEARELLDQMKAS 198
Query: 74 GLTPDAVTYNTV 85
G+ P A TYNTV
Sbjct: 199 GVAPTAATYNTV 210
>gi|414867944|tpg|DAA46501.1| TPA: hypothetical protein ZEAMMB73_380894 [Zea mays]
Length = 625
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
+++ ++ L + G SL AL I ++ V+ ++L L R E + +LFD++K
Sbjct: 447 HAAILRGLVRQGQSLAALRILREAVRKNYAVDSVCYTVVLHGLFRVHLVEEAFRLFDQMK 506
Query: 72 QSGLTPDAVTYNTV 85
SGL P+ TYN +
Sbjct: 507 NSGLAPNTCTYNVM 520
>gi|56783835|dbj|BAD81247.1| fertility restorer -like [Oryza sativa Japonica Group]
Length = 1090
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 2 QQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+Q+G ++ YS ++ L K+G KAL++ S+ +E + N+ I N +L+ L + G
Sbjct: 713 EQNGYSVDLAMYSILVEGLCKSGYLEKALDLCESMKEEGIQPNIVIHNSVLNGLCQQGCL 772
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +LFD ++ S + P VTY+ +
Sbjct: 773 TEAFRLFDYLESSEVLPTLVTYSIL 797
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 43/83 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ +I +Y + I + K G + +AL++++ ++ + + N ++ L GK + +
Sbjct: 476 RPNIVTYHTVIDMMCKLGETDRALQLFDDYKEDILFSSTIVHNCLIIALCNGGKVNMAEQ 535
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
+F+ + Q L PD+ TY + +
Sbjct: 536 IFNDLIQRNLRPDSCTYKKLIHT 558
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 30/110 (27%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDES-------------------------- 39
K I +Y+S I L K G++ KA+EIY I ++
Sbjct: 376 KIGIVTYNSVINGLCKVGHTKKAVEIYEGIAADNFTYSTLLHGHIKVEDATGVMAIKGRL 435
Query: 40 ----DKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
++V CN+++ L K + + LF ++ + L P+ VTY+TV
Sbjct: 436 ESSGVTIDVVTCNVLIKALFMIKKVDDACSLFLRMPEMRLRPNIVTYHTV 485
>gi|359495078|ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containing protein At4g20740-like
[Vitis vinifera]
Length = 1294
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLK-ALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G I S + + + G LK ALE++ + + ++ I N+++ + R G+
Sbjct: 962 MQKLGFPVIDDLSKFFSVMIEKGERLKLALEVFEHLKAKG-YCSISIYNILMEAIHRTGE 1020
Query: 60 FESSLKLFDKIKQSGLTPDAVTYN 83
+ +L LFD IK S PD+ TY+
Sbjct: 1021 VKKALSLFDDIKDSNFKPDSSTYS 1044
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 31/57 (54%)
Query: 26 LKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTY 82
L+ +Y + K VF+ N I+ LV+ G + ++ +++ K+ GL ++VTY
Sbjct: 743 LRVYYVYEKMKKFGIKPRVFLYNRIMDGLVKTGHLDLAMSVYEDFKEDGLVEESVTY 799
>gi|413953460|gb|AFW86109.1| hypothetical protein ZEAMMB73_051838 [Zea mays]
Length = 240
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
G +S Y+ IK LGK G A+ +++ + +V+ N ++S L R G + +L
Sbjct: 77 GSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMIDEAL 136
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
++++ G PD +YN +
Sbjct: 137 STMRRMQEHGCIPDINSYNII 157
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 1 MQQHGK-TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+HG I+SY+ + L K G +A+E+ +++ + +V N +L L G
Sbjct: 142 MQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVSPDVVSYNTVLGALSHAGM 201
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
FE + KL ++ G D +TY+++ ++
Sbjct: 202 FEEASKLMKEMNTLGFEYDLITYSSILEA 230
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ + L + G +AL + + ++ N+IL+ L + G ++++
Sbjct: 116 VYAYNALMSGLARTGMIDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLS 175
Query: 69 KIKQSGLTPDAVTYNTV 85
+KQS ++PD V+YNTV
Sbjct: 176 NMKQSTVSPDVVSYNTV 192
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 38/76 (50%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y S I LGK A E++ + + + + +++ L + G+ + ++ +FD+
Sbjct: 47 AAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDE 106
Query: 70 IKQSGLTPDAVTYNTV 85
+ + G PD YN +
Sbjct: 107 MNKLGCAPDVYAYNAL 122
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 43/80 (53%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K SI Y++ IK L + G LKAL++ N ++ E +++ NL+++ L + G +
Sbjct: 360 KPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANN 419
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L + G PD T+NT+
Sbjct: 420 LLNAAIAKGYLPDIFTFNTL 439
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y S I + ++G+ AL ++ + K ++ + N ++ L + G +L+L + +
Sbjct: 330 TYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDM 389
Query: 71 KQSGLTPDAVTYNTV 85
+ G++PD TYN V
Sbjct: 390 SKEGMSPDIWTYNLV 404
>gi|357498031|ref|XP_003619304.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494319|gb|AES75522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 805
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
+ H K + SY++ I K+G A ++ + + D NV N +L L +N +
Sbjct: 423 EMHCKPNTVSYNTLIDGFCKSGRLSHAWKLLDQMRDRGQPPNVITYNSLLHALCKNHHVD 482
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
++ L + K G+ PD TYNT+
Sbjct: 483 KAIALVNNFKDQGIQPDMHTYNTL 506
>gi|302841458|ref|XP_002952274.1| hypothetical protein VOLCADRAFT_42994 [Volvox carteri f.
nagariensis]
gi|300262539|gb|EFJ46745.1| hypothetical protein VOLCADRAFT_42994 [Volvox carteri f.
nagariensis]
Length = 225
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 43/76 (56%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y++ I K G K +E + + + V + ++S R+G++E +L++F +
Sbjct: 93 TTYNALITVYTKAGQLEKVMETFREMESAGCERTVITYSALISACERDGQWELALQMFSQ 152
Query: 70 IKQSGLTPDAVTYNTV 85
+ + G TP+ +TYN++
Sbjct: 153 MLREGCTPNVITYNSL 168
>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
Length = 1111
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ ++ + K G+ KA+E++ + ++ NV+ + L+ L NG E LK
Sbjct: 280 KITVRLGTTLVDLYAKCGDMDKAMEVFWGMEEK----NVYTWSSALNGLAMNGFGEKCLK 335
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LF +KQ G+TP+AVT+ +V
Sbjct: 336 LFSLMKQDGVTPNAVTFVSV 355
>gi|357499035|ref|XP_003619806.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355494821|gb|AES76024.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 302
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 44/78 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ + L KNG A E+Y + + N + N++++ L + G F+ +L + ++
Sbjct: 102 TYTMLVDGLCKNGRLKDAQEVYRDLMVKGYHFNACMHNVMINGLCKEGLFDEALFVLSEM 161
Query: 71 KQSGLTPDAVTYNTVYQS 88
+ +G TPD VTY T+ ++
Sbjct: 162 EDNGCTPDVVTYKTLIRA 179
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 39/77 (50%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +YSS I L K+G ++ + + D + ++ I +L L +N + + ++ L
Sbjct: 30 IVAYSSLIDGLCKSGKISDVWDLIDDMHDRGQQADIIIYTSLLDALFKNHQVDKAIALLK 89
Query: 69 KIKQSGLTPDAVTYNTV 85
KIK G+ PD TY +
Sbjct: 90 KIKDRGIEPDMFTYTML 106
>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 804
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
+S + ++ L +G LKA I +TD N+ N+++ + G + KLF +
Sbjct: 490 ASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKE 549
Query: 70 IKQSGLTPDAVTYNTV 85
++ GL+PD+VTY T+
Sbjct: 550 LQLKGLSPDSVTYGTL 565
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I+++S I + K+G + AL++++ +T N +I+S L + K + + +LF
Sbjct: 195 NIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLF 254
Query: 68 DKIKQSGLTPDAVTYNTV 85
+K G PD+VTYN +
Sbjct: 255 IAMKDHGCIPDSVTYNAL 272
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 33/54 (61%)
Query: 32 YNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
Y +T+ + K +V + +++ L + GKF+ +L+L +++ + GL PD YN +
Sbjct: 324 YRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNAL 377
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 46/80 (57%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y++ + + + L AL IYN + + N+ ++++ + ++GK +++L+
Sbjct: 158 KPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQ 217
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+FD++ Q + P+ +TY +
Sbjct: 218 MFDEMTQRRILPNKITYTII 237
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G +I +Y+ I K GN +A ++ + + + +V+ C ++ +GK
Sbjct: 496 MEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGK 555
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +LKLFD++ Q GL P+ VTY +
Sbjct: 556 VDMALKLFDEMPQRGLVPNVVTYTAM 581
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%)
Query: 22 NGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVT 81
+G AL++++ + NV ++S L ++G+ E + KL+D++K++GLTPD
Sbjct: 553 DGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTV 612
Query: 82 YNTVYQSDH 90
Y+++ S H
Sbjct: 613 YSSLVGSLH 621
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G ++ +Y+ I G +A ++ + ++ + +V++ I+SC R+G
Sbjct: 286 MEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGN 345
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +L LFD++ GL P A TY +
Sbjct: 346 VKRALVLFDEMTDKGLIPSAHTYGAL 371
>gi|255660946|gb|ACU25642.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 484
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G + +I SY + K + + G + A +N + E ++ N+++ +GK
Sbjct: 106 MEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGNEPTRHTFNIMIWGFFLSGK 165
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E++ + F+ +K + PD VTYNT+
Sbjct: 166 VETANRFFEDMKSREIMPDVVTYNTM 191
>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
Length = 467
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 44/78 (56%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ SY++ I L ++G A ++ + + E + ++ NL++ + GK ++L F
Sbjct: 142 NVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFF 201
Query: 68 DKIKQSGLTPDAVTYNTV 85
+++K +G P AVTYN +
Sbjct: 202 NQMKAAGFQPSAVTYNML 219
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + +G K ++ + + N++ N ++ R G+FE + LFD++
Sbjct: 75 TYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEM 134
Query: 71 KQSGLTPDAVTYNTV 85
G+ + V+YNT+
Sbjct: 135 PVRGIVRNVVSYNTL 149
>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
Length = 496
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 44/78 (56%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ SY++ I L ++G A ++ + + E + ++ NL++ + GK ++L F
Sbjct: 142 NVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFF 201
Query: 68 DKIKQSGLTPDAVTYNTV 85
+++K +G P AVTYN +
Sbjct: 202 NQMKAAGFQPSAVTYNML 219
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + +G K ++ + + N++ N ++ R G+FE + LFD++
Sbjct: 75 TYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEM 134
Query: 71 KQSGLTPDAVTYNTV 85
G+ + V+YNT+
Sbjct: 135 PVRGIVRNVVSYNTL 149
>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
Length = 410
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 44/78 (56%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ SY++ I L ++G A ++ + + E + ++ NL++ + GK ++L F
Sbjct: 142 NVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFF 201
Query: 68 DKIKQSGLTPDAVTYNTV 85
+++K +G P AVTYN +
Sbjct: 202 NQMKAAGFQPSAVTYNML 219
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + +G K ++ + + N++ N ++ R G+FE + LFD++
Sbjct: 75 TYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEM 134
Query: 71 KQSGLTPDAVTYNTV 85
G+ + V+YNT+
Sbjct: 135 PVRGIVRNVVSYNTL 149
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +YS + L NG KALE+++ + K++++I ++ + + GK + LF
Sbjct: 432 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 491
Query: 69 KIKQSGLTPDAVTYNTV 85
+ G+ P+ VTYNT+
Sbjct: 492 SLSLKGVKPNVVTYNTM 508
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G + ++ +YSS I L G A ++ + + ++ N+ N ++ V+ GK
Sbjct: 248 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 307
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
F + KL+D + + + PD TYN++
Sbjct: 308 FVEAEKLYDDMIKRSIDPDIFTYNSL 333
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 43/78 (55%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I+ L +G+ A +++ + + ++ +++L L NGK E +L++FD +
Sbjct: 399 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 458
Query: 71 KQSGLTPDAVTYNTVYQS 88
++S + D Y T+ +
Sbjct: 459 QKSEIKLDIYIYTTMIEG 476
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 43/83 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K I Y++ I+ + K G +++ S++ + K NV N ++S L + +
Sbjct: 464 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 523
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
L K+K+ G P++ TYNT+ ++
Sbjct: 524 LLKKMKEDGPLPNSGTYNTLIRA 546
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y ++ L K GN AL+++N++ S N N+++ + GKF+ + KL D +
Sbjct: 751 TYGCFLDHLTKEGNMENALQLHNAMLQGS-FANTVTYNILIRGYCQIGKFQEAAKLLDVM 809
Query: 71 KQSGLTPDAVTYNT 84
G+ PD +TY+T
Sbjct: 810 IGIGMVPDCITYST 823
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 44/82 (53%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++++Y+S I K+G KA ++Y+ +T + N ++ L + K + K
Sbjct: 467 KPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASK 526
Query: 66 LFDKIKQSGLTPDAVTYNTVYQ 87
LFD++ + + P+ VTYN + +
Sbjct: 527 LFDEMVELKILPNEVTYNVLIE 548
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 40/75 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S ++ S I+ L K G+ A E+ N + N+F+ N +++ L + GK E + LF
Sbjct: 329 SEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLF 388
Query: 68 DKIKQSGLTPDAVTY 82
+ + GL P+ VTY
Sbjct: 389 SVMAERGLNPNDVTY 403
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS++I K GN A++++ + K + + N ++ NG+ + +L+L + +
Sbjct: 820 TYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDM 879
Query: 71 KQSGLTPDAVTYNTV 85
GL P TY+++
Sbjct: 880 MLRGLKPTQSTYHSL 894
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G +I +Y+ I K GN +A ++ + + + +V+ C ++ +GK
Sbjct: 500 MEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGK 559
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +LKLFD++ Q GL P+ VTY +
Sbjct: 560 VDMALKLFDEMPQRGLVPNVVTYTAM 585
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%)
Query: 22 NGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVT 81
+G AL++++ + NV ++S L ++G+ E + KL+D++K++GLTPD
Sbjct: 557 DGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTV 616
Query: 82 YNTVYQSDH 90
Y+++ S H
Sbjct: 617 YSSLVGSLH 625
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G ++ +Y+ I G +A ++ + ++ + +V++ I+SC R+G
Sbjct: 290 MEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGN 349
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +L LFD++ GL P A TY +
Sbjct: 350 VKRALVLFDEMTDKGLIPSAHTYGAL 375
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +YS + L NG KALE+++ + K++++I ++ + + GK + LF
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 529
Query: 69 KIKQSGLTPDAVTYNTV 85
+ G+ P+ VTYNT+
Sbjct: 530 SLSLKGVKPNVVTYNTM 546
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G + ++ +YSS I L G A ++ + + ++ N+ N ++ V+ GK
Sbjct: 286 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 345
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
F + KL+D + + + PD TYN++
Sbjct: 346 FVEAEKLYDDMIKRSIDPDIFTYNSL 371
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 43/78 (55%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I+ L +G+ A +++ + + ++ +++L L NGK E +L++FD +
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Query: 71 KQSGLTPDAVTYNTVYQS 88
++S + D Y T+ +
Sbjct: 497 QKSEIKLDIYIYTTMIEG 514
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 43/83 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K I Y++ I+ + K G +++ S++ + K NV N ++S L + +
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 561
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
L K+K+ G P++ TYNT+ ++
Sbjct: 562 LLKKMKEDGPLPNSGTYNTLIRA 584
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 44/78 (56%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +YS+ I L K G A E++ + + NV N+++ L + + E + +L+
Sbjct: 301 NVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLY 360
Query: 68 DKIKQSGLTPDAVTYNTV 85
+++++G PD +TYN++
Sbjct: 361 HRMRETGCAPDIITYNSL 378
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 44/78 (56%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +YS+ I L K G A E++ + + NV N+++ L + + E + +L+
Sbjct: 253 NVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLY 312
Query: 68 DKIKQSGLTPDAVTYNTV 85
+++++G PD +TYN++
Sbjct: 313 HRMRETGCAPDIITYNSL 330
>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
Length = 664
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESD---KVNVFICNLILSCLVRNGKFESSLKLF 67
SY + LG+NGN A SI S+ K+ CN +L G F ++KLF
Sbjct: 61 SYFMMLDILGRNGNLNIARNFLFSIERRSNGSVKIEDRFCNTLLRSYGNAGLFNEAIKLF 120
Query: 68 DKIKQSGLTPDAVTYNTV 85
+K SG++P +T+N++
Sbjct: 121 SLMKSSGVSPSVITFNSL 138
>gi|15228104|ref|NP_181260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216851|sp|Q9ZUU3.1|PP190_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37230
gi|4056478|gb|AAC98044.1| unknown protein [Arabidopsis thaliana]
gi|28973644|gb|AAO64144.1| unknown protein [Arabidopsis thaliana]
gi|110736716|dbj|BAF00321.1| hypothetical protein [Arabidopsis thaliana]
gi|330254276|gb|AEC09370.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 757
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 42/78 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I SY+S K + + G + A +N + E + NL+L + + E++L+ F
Sbjct: 219 TIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFF 278
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ +K G++PD T+NT+
Sbjct: 279 EDMKTRGISPDDATFNTM 296
>gi|359495784|ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 616
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ ++ S++S I ++G ++E+ I D+ NV N ++SC +R G++ +L
Sbjct: 252 EKNVVSWTSMISAYAQHG----SIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALD 307
Query: 66 LFDKIKQSGLTPDAVT 81
LF+K++ S + PD T
Sbjct: 308 LFNKMRNSRVVPDEAT 323
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+ G ++ Y+S I K G + AL+I+ + + N+ N+I+ L +G
Sbjct: 348 LSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGK----NLVSWNVIIGALALHGCG 403
Query: 61 ESSLKLFDKIKQSGLTPDAVT 81
++KLF++++ G PD +T
Sbjct: 404 LEAIKLFEEMQADGTLPDEIT 424
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKV--NVFICNLILSCLVRNGKFESSLKLFD 68
SYS+ +K L ++ S +AL++ +++ +S NV N ++ R G+ + LF
Sbjct: 192 SYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFH 251
Query: 69 KIKQSGLTPDAVTYNT 84
++ Q G+ PD VTY++
Sbjct: 252 EMMQQGVVPDVVTYSS 267
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
++F CN +S L ++GK + + + FD + G PD VTY+ +
Sbjct: 331 DIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVL 373
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M + G T IS+ + L +N +A+ ++ + + K N+ I N ++ + + K
Sbjct: 639 MIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRK 698
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E + +LFD I +GL P+A TY +
Sbjct: 699 REEANELFDSISATGLVPNASTYGVM 724
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 40/80 (50%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +YS + G + L ++NS+ + + N+++ + G + ++
Sbjct: 364 KPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAML 423
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F ++++ G+ PDA TY TV
Sbjct: 424 IFTQMQERGVMPDAWTYGTV 443
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 38/78 (48%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
S Y+ I GK G +A+ I+ + + + + +++ R G+ ++ F++
Sbjct: 403 SVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQ 462
Query: 70 IKQSGLTPDAVTYNTVYQ 87
+ GL PD + YN++ Q
Sbjct: 463 MIAMGLKPDTIVYNSLIQ 480
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDES-DKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
Y+S I+ +GN +KA E+ + + + N N I++ L + G+ + +FD +
Sbjct: 475 YNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLV 534
Query: 71 KQSGLTPDAVTYNTV 85
G PD +T+N++
Sbjct: 535 IHIGERPDVITFNSL 549
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 38/74 (51%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
++S I L K G ++A +I++ + ++ +V N ++ GK E + + D +
Sbjct: 511 FNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMI 570
Query: 72 QSGLTPDAVTYNTV 85
G+ PD VTY+ +
Sbjct: 571 SVGIEPDVVTYSAL 584
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 40/77 (51%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I + +SY+ L K+G S +A E ++S+ + K ++ +++L G L LF+
Sbjct: 332 IFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFN 391
Query: 69 KIKQSGLTPDAVTYNTV 85
++ +G+ D YN +
Sbjct: 392 SMEGNGIVADHSVYNIL 408
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 43/74 (58%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I L K+G + +A +++S+ K N N +++ L ++GK + + K +K+
Sbjct: 431 TYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKM 490
Query: 71 KQSGLTPDAVTYNT 84
+G TPD TY++
Sbjct: 491 VSAGCTPDTYTYSS 504
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
K G AL + + K NV+ N ++ GK ++ L +K++ G+ PDAV
Sbjct: 336 KEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAV 395
Query: 81 TYN 83
TYN
Sbjct: 396 TYN 398
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 27/38 (71%)
Query: 48 NLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
N +++ L ++G+ + + LFD ++ G+ P+AVT+N++
Sbjct: 433 NALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSL 470
>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
Length = 662
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I+ K+ +A++++ +T K ++F N +L GK E + L D++
Sbjct: 276 TYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQM 335
Query: 71 KQSGLTPDAVTYNTV 85
K GL PD V+Y T+
Sbjct: 336 KTEGLQPDIVSYGTI 350
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ IK L K G E+ + + V N+++ L ++G+ E + +L ++
Sbjct: 13 SYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 72
Query: 71 KQSGLTPDAVTY 82
+Q G+TP VT+
Sbjct: 73 EQGGMTPSVVTF 84
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G + I SY + I K + KA E + D K NVFI N ++ RNG
Sbjct: 335 MKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGD 394
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
++ + +K +G+ P VTY ++
Sbjct: 395 ISGAIDAVETMKSNGIQPTNVTYGSL 420
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 36/74 (48%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I+ K G ++A+ + + N ++ ++G E + KLFD++
Sbjct: 452 YTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMV 511
Query: 72 QSGLTPDAVTYNTV 85
SG+ PD +TY T+
Sbjct: 512 GSGVIPDNITYGTL 525
>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella
moellendorffii]
gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella
moellendorffii]
Length = 394
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G T +I ++ S I+ L + + KAL+I++ + D K + F+ +++ L + K
Sbjct: 5 MKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINK 64
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+ + F+++ QSG PD VTY + S
Sbjct: 65 LDLAASYFEQMVQSGCLPDKVTYTVLVHS 93
>gi|255660992|gb|ACU25665.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 376
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ G +YS+ I L K N KA+ + N + K N + N +++ LV KFE
Sbjct: 122 QKGGVLDAFAYSAMINGLCKEANLDKAVSVLNGMIKSGCKPNAHVYNTLVNGLVGVSKFE 181
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
++++F ++ +P +TYNT+
Sbjct: 182 DAIRVFREMGTVHCSPTIITYNTL 205
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 45/81 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+ +YS +K L + +AL+++N +T + K +V + N+++ L GK + +L L+
Sbjct: 233 GVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMLNILIHGLCSVGKMQLALSLY 292
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
+ + P+ V++NT+ +
Sbjct: 293 FDMNRWKCAPNLVSHNTLMEG 313
>gi|298205062|emb|CBI38358.3| unnamed protein product [Vitis vinifera]
Length = 549
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ ++ S++S I ++G ++E+ I D+ NV N ++SC +R G++ +L
Sbjct: 185 EKNVVSWTSMISAYAQHG----SIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALD 240
Query: 66 LFDKIKQSGLTPDAVT 81
LF+K++ S + PD T
Sbjct: 241 LFNKMRNSRVVPDEAT 256
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+ G ++ Y+S I K G + AL+I+ + + N+ N+I+ L +G
Sbjct: 281 LSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGK----NLVSWNVIIGALALHGCG 336
Query: 61 ESSLKLFDKIKQSGLTPDAVT 81
++KLF++++ G PD +T
Sbjct: 337 LEAIKLFEEMQADGTLPDEIT 357
>gi|356575965|ref|XP_003556106.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g60050-like isoform 1 [Glycine max]
gi|356575967|ref|XP_003556107.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g60050-like isoform 2 [Glycine max]
Length = 480
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 40/80 (50%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + +Y+ I G KALE+Y + NVF N I+ L GKF+ +
Sbjct: 363 RPDVVAYTVMITGYVVAGEIEKALEMYQDMISREQVPNVFTYNSIIRGLCMAGKFDEACS 422
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+ +++ G +P++V YNT+
Sbjct: 423 MLKEMETKGCSPNSVVYNTL 442
>gi|449461469|ref|XP_004148464.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g01390-like [Cucumis sativus]
Length = 1058
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ SY++YIK L NG +A Y + N I +++ L+ GK + +L +F
Sbjct: 251 TVVSYTAYIKILLDNGQINEATATYKKMLQSGLSPNCCIYTILMEYLIGEGKCKEALDIF 310
Query: 68 DKIKQSGLTPDAVTYNTVYQ 87
K++ +G+ PD N + Q
Sbjct: 311 SKMQDAGVYPDKAACNILIQ 330
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 46/77 (59%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y++ I G +A E+ N++ + V+ N +++ L ++GK+E + ++F
Sbjct: 270 IVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFA 329
Query: 69 KIKQSGLTPDAVTYNTV 85
++ +SGL+PD+ TY ++
Sbjct: 330 EMLRSGLSPDSTTYRSL 346
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
SI + ++ I L + G A +Y I+ +NV+ N++++ L ++GK E
Sbjct: 198 VSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTF 257
Query: 67 FDKIKQSGLTPDAVTYNTV 85
++++ G+ PD VTYNT+
Sbjct: 258 LSQVQEKGVYPDIVTYNTL 276
Score = 41.6 bits (96), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SYS + L G+ +A +++ + ++ K V ICN ++ R+G +K+
Sbjct: 552 SYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM 611
Query: 71 KQSGLTPDAVTYNTV 85
G PD ++YNT+
Sbjct: 612 ISEGFVPDCISYNTL 626
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
+SS + ++GN KAL +NS+ + + I +++ R G ++ L +++
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 437
Query: 72 QSGLTPDAVTYNTV 85
Q G D VTYNT+
Sbjct: 438 QQGCAMDVVTYNTI 451
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFIC-NLILSCLVRNGKFESSLKLFD 68
++Y S + K G+ ++ ++++ + D V +C + ++S R+G + +L F+
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDMRSR-DVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
+K++GL PD V Y + Q
Sbjct: 400 SVKEAGLIPDNVIYTILIQ 418
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 47/85 (55%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+QQ + +Y++ + L K +A +++N +T+ + + + +++ + G
Sbjct: 437 LQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNL 496
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+++++LF K+K+ + D VTYNT+
Sbjct: 497 QNAMELFQKMKEKRIRLDVVTYNTL 521
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I +YSS I L K+G A E++++I D NV N++L L + + +++LF
Sbjct: 392 NIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELF 451
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ + + GLTP+ +YN +
Sbjct: 452 NLMFERGLTPNVSSYNIL 469
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 37/59 (62%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
KA+E++N + + NV N++++ ++ + + ++ LF+++ + L PD+VTYN +
Sbjct: 446 KAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCL 504
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y + I L K G + +A E+ + + + + NV I N+I+ L ++G + L+ +
Sbjct: 185 TYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDV 244
Query: 71 KQSGLTPDAVTYNTV 85
G+ PD TY +
Sbjct: 245 VGRGIDPDVFTYTCL 259
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 43/74 (58%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I L K+G + +A +++S+ K N N +++ L ++GK + + K +K+
Sbjct: 253 TYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKM 312
Query: 71 KQSGLTPDAVTYNT 84
+G TPD TY++
Sbjct: 313 VSAGCTPDTYTYSS 326
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
K G AL + + K NV+ N ++ GK ++ L +K++ G+ PDAV
Sbjct: 158 KEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAV 217
Query: 81 TYN 83
TYN
Sbjct: 218 TYN 220
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 27/38 (71%)
Query: 48 NLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
N +++ L ++G+ + + LFD ++ G+ P+AVT+N++
Sbjct: 255 NALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSL 292
>gi|242041019|ref|XP_002467904.1| hypothetical protein SORBIDRAFT_01g036150 [Sorghum bicolor]
gi|241921758|gb|EER94902.1| hypothetical protein SORBIDRAFT_01g036150 [Sorghum bicolor]
Length = 558
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 45/80 (56%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ S++++S+ + L K G KA+E+++++ + + N ++ L G+ E +L
Sbjct: 210 RPSVATFSAVVGCLCKRGRVTKAMEVFDAMRALGCEPTIRSYNSLVGGLCYVGRLEEALD 269
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L +K+K S +TPD T+ V
Sbjct: 270 LLNKLKDSPMTPDIYTFTIV 289
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 38/78 (48%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I SY+S + L G +AL++ N + D +++ ++L + G+ E + +F
Sbjct: 247 TIRSYNSLVGGLCYVGRLEEALDLLNKLKDSPMTPDIYTFTIVLDGFCKVGRTEEATAIF 306
Query: 68 DKIKQSGLTPDAVTYNTV 85
GL+P TYN +
Sbjct: 307 HDAIGMGLSPTIFTYNAL 324
>gi|255574497|ref|XP_002528160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532417|gb|EEF34211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 569
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 43/83 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ S +Y+ I GK S AL+++N + + K N+ +++ R G E + +
Sbjct: 250 QPSTETYTLLINLHGKASQSYMALKLFNEMRSQKCKPNICTYTALVNAFAREGLCEKAEE 309
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
+F+++++ G PD YN + ++
Sbjct: 310 IFEQLQEDGHEPDVYAYNALMEA 332
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 40/81 (49%)
Query: 3 QHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFES 62
Q K +I +Y++ + + G KA EI+ + ++ + +V+ N ++ R G
Sbjct: 282 QKCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGHEPDVYAYNALMEAYSRAGFPYG 341
Query: 63 SLKLFDKIKQSGLTPDAVTYN 83
+ ++F ++ G PD +YN
Sbjct: 342 AAEIFSLMQHMGCEPDRASYN 362
>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 721
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+S I G KA ++YN +T + N + I+S L R +++LF
Sbjct: 296 TVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLF 355
Query: 68 DKIKQSGLTPDAVTYNTVYQ 87
++K+ + P VTYN + +
Sbjct: 356 GEMKERKIMPSEVTYNVMIE 375
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y ++ L + GN KA+++++++ V N+++ R GK E + KL +
Sbjct: 579 TYGCFLDHLTRGGNMEKAVQLHHAMLKGFLATTVSY-NILIRGFCRLGKIEEATKLLHGM 637
Query: 71 KQSGLTPDAVTYNTV 85
+ + PD +TY+T+
Sbjct: 638 TDNDILPDYITYSTI 652
>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 624
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 29 LEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
LEI+ + D K+ V+ +++ L R G+ E S KL + G+ P+A TYNT+
Sbjct: 209 LEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTI 265
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 46/92 (50%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
M+ K S SY++ I K GN +A ++ ++ + + N N+++ + GK
Sbjct: 461 MEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKI 520
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTVYQSDHIT 92
+ + KL ++ +G+ PD+ TY ++ + I
Sbjct: 521 KEARKLRANMEANGMDPDSYTYTSLIHGECIA 552
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ ++ KNG A ++++ + + + +V + ++S R G + + LFD++
Sbjct: 296 TYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDEL 355
Query: 71 KQSGLTPDAVTYNTV 85
+ GL+P + TY +
Sbjct: 356 TEKGLSPSSYTYGAL 370
>gi|357502615|ref|XP_003621596.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496611|gb|AES77814.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS+ I K G +A+++Y +V+V I+ L +NG ESS+ L +
Sbjct: 461 TYSTMIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYTSIIDSLCKNGLVESSIMLLIAM 520
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ P+ VT+N++
Sbjct: 521 IEKGIKPNVVTFNSI 535
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNG-K 59
++ HG T + S+S+ I G+NG+ A++++ S+ N+ N ++ +
Sbjct: 206 LEGHGNT-VYSFSAMISAYGRNGHFSDAVDLFRSMRSWGVYPNLISYNSLIDAGAKGEVD 264
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
F+ +K FD++ G+ PD +TYN++
Sbjct: 265 FDVVVKFFDEMLAEGIVPDRLTYNSL 290
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 39/73 (53%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
S+ I LG+ G AL ++ S E V+ + ++S RNG F ++ LF ++
Sbjct: 182 STMIGTLGRLGEINHALRLFESARLEGHGNTVYSFSAMISAYGRNGHFSDAVDLFRSMRS 241
Query: 73 SGLTPDAVTYNTV 85
G+ P+ ++YN++
Sbjct: 242 WGVYPNLISYNSL 254
>gi|302759176|ref|XP_002963011.1| hypothetical protein SELMODRAFT_438275 [Selaginella moellendorffii]
gi|300169872|gb|EFJ36474.1| hypothetical protein SELMODRAFT_438275 [Selaginella moellendorffii]
Length = 2074
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 40/77 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +YS+ I LG +GN L A ++ I + +++ F N ++ C R + + +L
Sbjct: 1561 KHDLVNYSTMIMILGDDGNYLMAEALFVEIQELGLRLDTFAVNNMIRCYTRVNRIQEALD 1620
Query: 66 LFDKIKQSGLTPDAVTY 82
L+ K+ G PD T+
Sbjct: 1621 LYRKMPYFGCHPDNCTF 1637
>gi|302797108|ref|XP_002980315.1| hypothetical protein SELMODRAFT_444519 [Selaginella moellendorffii]
gi|300151931|gb|EFJ18575.1| hypothetical protein SELMODRAFT_444519 [Selaginella moellendorffii]
Length = 2030
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 40/77 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +YS+ I LG +GN L A ++ I + +++ F N ++ C R + + +L
Sbjct: 1517 KHDLVNYSTMIMILGDDGNYLMAEALFVEIQELGLRLDTFAVNNMIRCYTRVNRIQEALD 1576
Query: 66 LFDKIKQSGLTPDAVTY 82
L+ K+ G PD T+
Sbjct: 1577 LYRKMPYFGCHPDNCTF 1593
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G ++ +YS+ + GN A+E++ + D + N+ N+I+ L R GK
Sbjct: 420 MEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGK 479
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNT 84
+ F+K+ Q L PD T+N+
Sbjct: 480 LAKAYFYFEKLLQRRLCPDVYTFNS 504
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 9 ISSYSSYIKFLGKNGNSL-KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+ +++S++ L + +++ +E++ S+ + N+ ++++ + R G E +L++F
Sbjct: 499 VYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIF 558
Query: 68 DKIKQSGLTPDAVTYNTVYQSDHITWI 94
++ G+ PD V +NT+ I W+
Sbjct: 559 HEMVSRGVAPDVVVFNTL-----IRWL 580
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY+ I L ++G AL++++ + D N N ++ V+ G E+ +L D++
Sbjct: 197 SYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQM 256
Query: 71 KQSGLTPDAVTYNTV 85
Q G P+ VTYN +
Sbjct: 257 LQDGRKPNVVTYNVL 271
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ G K+++ S+ S +K KNG +A+ I + + + N + N I+ + +G
Sbjct: 466 MQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGG 525
Query: 60 FESSLKLFDKIKQSGLTPDAVTYN 83
E + L +K+K SG++ TYN
Sbjct: 526 TEQAFLLVEKMKSSGVSASIFTYN 549
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 30/43 (69%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
+ F N++++ L R+GK +LK+FD++ G+ P+ +TYNT+
Sbjct: 194 DAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTM 236
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G S+ ++++ I G+ G K + + + D+ K NV ++ +NGK
Sbjct: 431 MEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGK 490
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
++ + D + + P+A YN++
Sbjct: 491 IPEAVAILDDMIHKDVVPNAQVYNSI 516
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS L + G+S L ++ + + + C+++L+ L ++GK + ++ + +
Sbjct: 302 TYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEML 361
Query: 71 KQSGLTPDAVTYNTV 85
+GL P YNT+
Sbjct: 362 VHTGLVPTTAIYNTL 376
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 38/76 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I K G+ + + + + K NV N++LS L R G+ + + L D++
Sbjct: 232 TYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEM 291
Query: 71 KQSGLTPDAVTYNTVY 86
+ PD TY+ ++
Sbjct: 292 TSYSMLPDGFTYSILF 307
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S + +G S KA+ I+ + + + +V N ++ L +NGK + K+FD +
Sbjct: 79 TYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSM 138
Query: 71 KQSGLTPDAVTYNTV 85
+ GL PD TY T+
Sbjct: 139 VKRGLKPDITTYGTL 153
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 37/74 (50%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+S I L KA E+ I D+ N+ N IL L + G+ S KLFD +
Sbjct: 255 YTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLG 314
Query: 72 QSGLTPDAVTYNTV 85
G+ PD +TY+T+
Sbjct: 315 HIGVNPDVITYSTL 328
Score = 37.7 bits (86), Expect = 0.93, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 10/85 (11%)
Query: 6 KTSISSYSSYIKFLGKNG-----NSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
K I++Y + + G + L AL + N + + N+ IC + K
Sbjct: 144 KPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILIC-----AYTKQEKV 198
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + +F K++Q GLTP+AV Y TV
Sbjct: 199 DEVVLVFSKMRQQGLTPNAVNYRTV 223
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I L K +A+E+ + N F N I+ +G+ E ++ +F K+
Sbjct: 48 TYNSIIAALSKAQAMDRAMEVLTVMV----MPNCFTYNSIMHGYCSSGQSEKAIGIFRKM 103
Query: 71 KQSGLTPDAVTYNTV 85
G+ PD VTYN++
Sbjct: 104 CSDGIEPDVVTYNSL 118
>gi|356523086|ref|XP_003530173.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g17670-like [Glycine max]
Length = 456
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 44/68 (64%), Gaps = 4/68 (5%)
Query: 20 GKNGNSLKALEIYNSITDESDKVNVFICNLILS--CLVRNGKFESSLKLFDKIKQSGLTP 77
GKN N +A+ + + + +E K++ F+ N I+ C++ G ++++++K+K+ G+ P
Sbjct: 234 GKNLNLREAMRLVSVLHEEGFKLDCFVYNTIMKGYCVLSRG--SEAIEVYNKMKEEGVEP 291
Query: 78 DAVTYNTV 85
D VTYNT+
Sbjct: 292 DLVTYNTL 299
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 34/59 (57%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
+A+E+YN + +E + ++ N ++ L ++G+ + KL + + G PD VTY ++
Sbjct: 276 EAIEVYNKMKEEGVEPDLVTYNTLIFGLSKSGRVTEARKLLRVMAEKGYFPDEVTYTSL 334
>gi|224085950|ref|XP_002307751.1| predicted protein [Populus trichocarpa]
gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 46/83 (55%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ +YS I L + G +A +I+ + D + N N ++ V+ G+ E L+
Sbjct: 230 KPNVYTYSIVIDSLCRCGQITRAHDIFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQ 289
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
+++++K+ G PD VTYN + ++
Sbjct: 290 VYNQMKRLGCEPDTVTYNFLIET 312
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 40/76 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S ++ K G + K L++YN + + + N ++ ++ E ++K+ +
Sbjct: 270 TYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIETHCKDENLEDAIKVIGLM 329
Query: 71 KQSGLTPDAVTYNTVY 86
+ G P+A T+NT++
Sbjct: 330 AKKGCAPNASTFNTLF 345
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 41/74 (55%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ ++ + GN +A ++ + K NV+ ++++ L R G+ + +F ++
Sbjct: 201 YTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAEML 260
Query: 72 QSGLTPDAVTYNTV 85
+G P+++TYN++
Sbjct: 261 DAGCQPNSITYNSL 274
>gi|383132382|gb|AFG47044.1| Pinus taeda anonymous locus 0_8271_02 genomic sequence
gi|383132386|gb|AFG47046.1| Pinus taeda anonymous locus 0_8271_02 genomic sequence
gi|383132390|gb|AFG47048.1| Pinus taeda anonymous locus 0_8271_02 genomic sequence
gi|383132392|gb|AFG47049.1| Pinus taeda anonymous locus 0_8271_02 genomic sequence
Length = 112
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+ I LGK G +A I+ + + +V + N ++ + G + +LKLF
Sbjct: 11 NVFTYTEVINGLGKAGRVQEAYRIFQDMQKDGCSPDVVMFNKLIDIMGDAGLLDDALKLF 70
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
+++ G P VTYN+V ++
Sbjct: 71 GQMETVGCNPTVVTYNSVMEA 91
>gi|356512664|ref|XP_003525037.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74750-like [Glycine max]
Length = 873
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G + + +YS I LGK GN A ++ + + N+ N++++ +
Sbjct: 473 MQEAGLSPDTFTYSVIINCLGKAGNLAAAHWLFCEMVEHGCVPNLVTYNIMIALQAKARN 532
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+E +LKL+ ++ +G PD VTY+ V ++
Sbjct: 533 YEMALKLYHDMQNAGFQPDKVTYSIVMEA 561
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 31/71 (43%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y + GK GN KA E Y ++ + NV CN +LS +R + + L +
Sbjct: 590 YGLLVDLWGKAGNVEKASEWYQAMLNAGLLPNVPTCNSLLSAFLRLHRLPDAYNLVQSMV 649
Query: 72 QSGLTPDAVTY 82
GL P TY
Sbjct: 650 ALGLRPSLQTY 660
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 37/73 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y + I K G A+ +Y + + + F ++I++CL + G ++ LF ++
Sbjct: 449 TYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVIINCLGKAGNLAAAHWLFCEM 508
Query: 71 KQSGLTPDAVTYN 83
+ G P+ VTYN
Sbjct: 509 VEHGCVPNLVTYN 521
>gi|298706415|emb|CBJ29411.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 416
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 42/79 (53%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +YS+ I G +A+ I + + + + NV CN + G+++ +L
Sbjct: 43 KLDVVAYSAAITACANGGRWQEAVAILSDMPNVGVRPNVISCNAAIKAWGEAGQWQHALS 102
Query: 66 LFDKIKQSGLTPDAVTYNT 84
+ + ++GL+PDA++YNT
Sbjct: 103 ILRGMSKAGLSPDAISYNT 121
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNG--KFESSLKLFD 68
SY++ I LG G S +A E+ + ++ + V N ++ + R G ++ ++ L
Sbjct: 118 SYNTAISALGVAGQSEQAQELMSEMSRLGIEPTVVTYNSAIAAIARGGGGQWRQAVALVK 177
Query: 69 KIKQSGLTPDAVTYNTV 85
+ +G+TPD++TYN++
Sbjct: 178 HMSLAGVTPDSITYNSL 194
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 35/72 (48%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I GK G +AL + + + ++ + +S G++E S+ L +
Sbjct: 190 TYNSLIVACGKGGQWKQALSVLKGMKKQGLSCDIIGYSAAISACGEAGQWEYSVGLLAEA 249
Query: 71 KQSGLTPDAVTY 82
K G+TPD V Y
Sbjct: 250 KSLGITPDLVAY 261
>gi|383132384|gb|AFG47045.1| Pinus taeda anonymous locus 0_8271_02 genomic sequence
gi|383132388|gb|AFG47047.1| Pinus taeda anonymous locus 0_8271_02 genomic sequence
Length = 112
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+ I LGK G +A I+ + + +V + N ++ + G + +LKLF
Sbjct: 11 NVFTYTEVINGLGKAGRVQEAYRIFQDMQKDGCSPDVVMFNKLIDIMGDAGLLDDALKLF 70
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
+++ G P VTYN+V ++
Sbjct: 71 GQMETVGCNPTVVTYNSVMEA 91
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 43/78 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S ++ SS ++ L K G +AL + + D N+F+ N ++ L + KF + LF
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF 390
Query: 68 DKIKQSGLTPDAVTYNTV 85
D++ + GL P+ VTY+ +
Sbjct: 391 DRMGKIGLRPNDVTYSIL 408
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 44/80 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+S + G KAL +Y+ +T + +++ +LS L R G ++KLF
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Query: 68 DKIKQSGLTPDAVTYNTVYQ 87
+++ + + P+ VTYN + +
Sbjct: 531 NEMAEWNVKPNRVTYNVMIE 550
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 11 SYSSYIKFLGKNGNSL-KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
+Y ++ L K + KA+E++N+I + N N+++ R G+ E + +L +
Sbjct: 754 TYGCFLDILTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITR 812
Query: 70 IKQSGLTPDAVTYNTV 85
+ G++PD +TY T+
Sbjct: 813 MIGDGVSPDCITYTTM 828
>gi|147791850|emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]
Length = 688
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ ++ S++S I ++G ++E+ I D+ NV N ++SC +R G++ +L
Sbjct: 324 EKNVVSWTSMISAYAQHG----SIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALD 379
Query: 66 LFDKIKQSGLTPDAVT 81
LF+K++ S + PD T
Sbjct: 380 LFNKMRNSRVVPDEAT 395
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+ G ++ Y+S I K G + AL+I+ + + N+ N+I+ L +G
Sbjct: 420 LSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGK----NLVSWNVIIGALALHGCG 475
Query: 61 ESSLKLFDKIKQSGLTPDAVT 81
++KLF++++ G PD +T
Sbjct: 476 LEAIKLFEEMQADGTLPDEIT 496
>gi|46091161|dbj|BAD13709.1| PPR protein [Oryza sativa Indica Group]
Length = 332
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ SYS+ I K G+ K YN + D+ NV N I++ L + + ++++
Sbjct: 12 VVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEVLT 71
Query: 69 KIKQSGLTPDAVTYNTV 85
+ +SG+ PD +TYN++
Sbjct: 72 TMVKSGVMPDCMTYNSI 88
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 35/112 (31%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILS---------------- 52
+ +Y+S + +L KNG +A +I++S+T K ++ +L
Sbjct: 117 VVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLD 176
Query: 53 CLVRNG-------------------KFESSLKLFDKIKQSGLTPDAVTYNTV 85
+VRNG K E ++ +F K++Q GL P+AVTY TV
Sbjct: 177 LMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTV 228
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 39/77 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S + +G +A+ + + + +V N ++ L +NG+ + K+FD +
Sbjct: 84 TYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSM 143
Query: 71 KQSGLTPDAVTYNTVYQ 87
+ GL PD TY T+ Q
Sbjct: 144 TKRGLKPDITTYGTLLQ 160
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 39/78 (50%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+S I L K KA+E+ ++ + N I+ +G+ + ++
Sbjct: 46 NVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFL 105
Query: 68 DKIKQSGLTPDAVTYNTV 85
K++ G+ PD VTYN++
Sbjct: 106 KKMRSDGVEPDVVTYNSL 123
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 34/62 (54%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVY 86
+A+ +++ + + N ++ L ++G+ E ++ F+++ GL PD++ YN++
Sbjct: 205 EAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLI 264
Query: 87 QS 88
S
Sbjct: 265 HS 266
>gi|255660914|gb|ACU25626.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 481
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G + +I SY + K + + G + A +N + E + N+++ +GK
Sbjct: 106 MEELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGK 165
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+++++ F+ +K ++PD VTYNT+
Sbjct: 166 MDTAMRFFEDMKSREISPDVVTYNTM 191
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +YS + L NG KALE+++ + K++++I ++ + + GK + LF
Sbjct: 395 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 454
Query: 69 KIKQSGLTPDAVTYNTV 85
+ G+ P+ VTYNT+
Sbjct: 455 SLSLKGVKPNVVTYNTM 471
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G + ++ +YSS I L G A ++ + + ++ N+ N ++ V+ GK
Sbjct: 211 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 270
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
F + KL D + + + PD TYN++
Sbjct: 271 FVEAEKLHDDMIKRSIDPDIFTYNSL 296
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K I Y++ I+ + K G +++ S++ + K NV N ++S L + +
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 486
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
L K+K+ G PD+ TYNT+ ++
Sbjct: 487 LLKKMKEDGPLPDSGTYNTLIRA 509
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 43/77 (55%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I+ L +G+ A +++ + + ++ +++L L NGK E +L++FD +
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Query: 71 KQSGLTPDAVTYNTVYQ 87
++S + D Y T+ +
Sbjct: 422 QKSEIKLDIYIYTTMIE 438
>gi|326488077|dbj|BAJ89877.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 395
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 46/85 (54%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
++Q I SY+ I L +G L + +TD + ++ NL++ L ++G+
Sbjct: 236 VEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRL 295
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
E +L L++ +++ G+ P+ TYN++
Sbjct: 296 EEALSLYNDMEKKGIAPNLYTYNSL 320
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I LGK+G +AL +YN + + N++ N ++ L + GK + K+++++
Sbjct: 281 TYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEEL 340
Query: 71 KQSGLTPDAVTYNTV 85
G P+ TYN +
Sbjct: 341 LAKGWKPNVFTYNAL 355
Score = 37.7 bits (86), Expect = 0.93, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G ++ +Y+S I +LGK G + +A ++Y + + K NVF N ++ +G
Sbjct: 305 MEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGS 364
Query: 60 FESSLKLFDKIKQSGLTPDAVTY 82
E++ + ++ G P++ TY
Sbjct: 365 PENAFAAYGRMIVGGCRPNSSTY 387
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 32/61 (52%)
Query: 23 GNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTY 82
G++ K E++ S+ ++ ++ +++ L +G+ L F ++ GL PD +TY
Sbjct: 223 GDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITY 282
Query: 83 N 83
N
Sbjct: 283 N 283
>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
Length = 1010
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 41 KVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
K VF N+++ C+ + G E++ LF+++K GL PD VTYN++
Sbjct: 92 KPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSM 136
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I GK G + + + D + +V N +++C + GK L+ F ++
Sbjct: 132 TYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREM 191
Query: 71 KQSGLTPDAVTYNTV 85
K++GL P+ V+Y+T+
Sbjct: 192 KRNGLKPNVVSYSTL 206
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESD-KVNVFICNLILSCLVRNGKFESSL 64
K ++ ++ I L KN KA++ + I+++ + N I ++ L + + E++
Sbjct: 302 KVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAAT 361
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
LF+++ Q GL PD Y ++
Sbjct: 362 TLFEQMAQKGLVPDRTAYTSL 382
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 37/77 (48%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ I K G K LE + + K NV + ++ + G + ++K +
Sbjct: 165 VITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYV 224
Query: 69 KIKQSGLTPDAVTYNTV 85
+++ GL P+ TY ++
Sbjct: 225 DMRRVGLVPNEYTYTSL 241
>gi|297808179|ref|XP_002871973.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297317810|gb|EFH48232.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 831
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ S + + L + G +A I+N++ +E K ++ +++ L R F S L L
Sbjct: 319 VRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSIITYTTLVTALTRQKHFHSLLSLIS 378
Query: 69 KIKQSGLTPDAVTYNTV 85
K++++GL PD + +N +
Sbjct: 379 KVQKNGLRPDTILFNAI 395
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 47/85 (55%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+++ K SI +Y++ + L + + L + + + + + + N I++ +G
Sbjct: 346 IEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVQKNGLRPDTILFNAIINASSESGNL 405
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++K+F+K+K+SG P A T+NT+
Sbjct: 406 DQAMKIFEKMKESGCKPTASTFNTL 430
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGN---SLKALEIYNSITDESDKVNVFICNLILSCLVR 56
M++ G K + S++++ IK GK G S + LE+ + DE + N CN+++
Sbjct: 415 MKESGCKPTASTFNTLIKGYGKIGKLEESSRLLEMM--LRDEMLQPNDRTCNILVQAWCN 472
Query: 57 NGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
K E + + K++ G+ PDAVT+NT+ ++
Sbjct: 473 QRKIEEAWNIVYKMQSFGVKPDAVTFNTLARA 504
>gi|42561931|ref|NP_172654.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75104249|sp|Q5BIV3.1|PPR35_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11900
gi|60543317|gb|AAX22256.1| At1g11900 [Arabidopsis thaliana]
gi|332190689|gb|AEE28810.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 367
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M Q G + + SY++ I LG++GN ++L +++ + + +V++ ++ CL ++G
Sbjct: 274 MVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGD 333
Query: 60 FESSLKLFDKIKQS 73
F+S+L+L D++K +
Sbjct: 334 FQSALQLSDELKNT 347
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDE-SDKVNVFICNLILSCLVRNGKFESSL 64
K + +Y+S + LG+ G + L + +++ ++ S VN+ N +L+ + + +F+ L
Sbjct: 209 KPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCL 268
Query: 65 KLFDKIKQSGLTPDAVTYNTVYQS 88
+++++ Q G+ PD ++Y V S
Sbjct: 269 VIYNEMVQCGIEPDLLSYTAVIDS 292
>gi|79329389|ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g40405
gi|10178152|dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007161|gb|AED94544.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ ++ + K G+ KA+E++ + ++ NV+ + L+ L NG E L+
Sbjct: 272 KITVRLATTLVDLYAKCGDMEKAMEVFWGMEEK----NVYTWSSALNGLAMNGFGEKCLE 327
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LF +KQ G+TP+AVT+ +V
Sbjct: 328 LFSLMKQDGVTPNAVTFVSV 347
>gi|303280720|ref|XP_003059652.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458307|gb|EEH55604.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 196
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 41/73 (56%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
S+ I GK+ KALE++ + E + N++ + ++S + + + +L++F+ K
Sbjct: 31 SALINACGKSRQWKKALEVFEEMRAEGVEANIYTYSALISACAKGKQLDKALEIFELCKV 90
Query: 73 SGLTPDAVTYNTV 85
+G+ PD +TY +
Sbjct: 91 NGVEPDGITYGAM 103
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y + I K KALEI+ + + N N +L+ R GK + + ++FD +
Sbjct: 99 TYGAMISACEKGRRVDKALEIFVQMKKAGMEANAITYNALLAACERAGKADDAREVFDDM 158
Query: 71 KQSGLTPDAVTYNTV 85
K+ G+ PD V + +
Sbjct: 159 KRDGIKPDRVAHAAL 173
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G + +I +YS+ I K KALEI+ + + ++S + +
Sbjct: 53 MRAEGVEANIYTYSALISACAKGKQLDKALEIFELCKVNGVEPDGITYGAMISACEKGRR 112
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+ +L++F ++K++G+ +A+TYN + +
Sbjct: 113 VDKALEIFVQMKKAGMEANAITYNALLAA 141
>gi|219885451|gb|ACL53100.1| unknown [Zea mays]
Length = 437
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 44/80 (55%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ S++++S+ + L K G KA+E+ +++ + + N ++ L G+ E +L+
Sbjct: 88 RPSVATFSAVVGCLCKRGRVTKAMEVLDAMCGLGCEPTIRTYNSLVGGLCYVGRLEEALE 147
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L K+K S LTPD T+ V
Sbjct: 148 LLKKLKDSPLTPDIYTFTIV 167
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 37/78 (47%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I +Y+S + L G +ALE+ + D +++ ++L + G+ E + +F
Sbjct: 125 TIRTYNSLVGGLCYVGRLEEALELLKKLKDSPLTPDIYTFTIVLDGFCKVGRTEEATAIF 184
Query: 68 DKIKQSGLTPDAVTYNTV 85
GL+P TYN +
Sbjct: 185 HDAIGMGLSPTTFTYNAL 202
>gi|219885281|gb|ACL53015.1| unknown [Zea mays]
gi|414866677|tpg|DAA45234.1| TPA: hypothetical protein ZEAMMB73_414823 [Zea mays]
Length = 559
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 44/80 (55%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ S++++S+ + L K G KA+E+ +++ + + N ++ L G+ E +L+
Sbjct: 210 RPSVATFSAVVGCLCKRGRVTKAMEVLDAMCGLGCEPTIRTYNSLVGGLCYVGRLEEALE 269
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L K+K S LTPD T+ V
Sbjct: 270 LLKKLKDSPLTPDIYTFTIV 289
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 37/78 (47%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I +Y+S + L G +ALE+ + D +++ ++L + G+ E + +F
Sbjct: 247 TIRTYNSLVGGLCYVGRLEEALELLKKLKDSPLTPDIYTFTIVLDGFCKVGRTEEATAIF 306
Query: 68 DKIKQSGLTPDAVTYNTV 85
GL+P TYN +
Sbjct: 307 HDAIGMGLSPTTFTYNAL 324
>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
Length = 694
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YSS + L K G +AL I + + +++ +CN +++ VR K E ++ F ++
Sbjct: 431 AYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREM 490
Query: 71 KQSGLTPDAVTYNTV 85
+ G +P V+YNT+
Sbjct: 491 ETKGCSPTVVSYNTL 505
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 45/85 (52%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+++ K + +YS + L + AL ++ + + + +V + N+++ L GK
Sbjct: 526 LEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKI 585
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
E +L L+ +KQS P+ VT+NT+
Sbjct: 586 EDALLLYSNMKQSNCLPNLVTHNTL 610
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 44/76 (57%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+ IK K ++A + + + + K +V+ +++ +V++G S+L++F
Sbjct: 148 NLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVF 207
Query: 68 DKIKQSGLTPDAVTYN 83
D++ + GL PD + YN
Sbjct: 208 DEMFERGLVPDVMCYN 223
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + SY + I + K+G+ + ALE+++ + + +V N+++ + G + +
Sbjct: 181 KPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKE 240
Query: 66 LFDK-IKQSGLTPDAVTYNTV 85
++++ +K S + P+ VTYN +
Sbjct: 241 IWERLVKGSCVYPNVVTYNVM 261
>gi|326530248|dbj|BAJ97550.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESD-----KVNVFICNLILSCLVRNGKFESSLK 65
SY+ + LG+NG A+E+++ + E D VN+ N+++ +F+ +++
Sbjct: 314 SYNMVLDALGRNGRLDDAVELFDRMCKEHDPPRRIAVNLGSFNVMVDAYCGVERFQDAIE 373
Query: 66 LFDKIKQSGLTPDAVTYNTVYQSDHITWI 94
+F K+ + TPDA++YN++ I W+
Sbjct: 374 VFGKMGEKSCTPDALSYNSL-----INWL 397
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 44 VFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
VF CN +L+ L+R ++ L L + Q+ + P T+N + Q+
Sbjct: 129 VFTCNTVLAALLRQARYADLLSLHRFVTQASVAPTVATHNLLLQA 173
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 37/75 (49%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY+S I +LGKN +A E+Y + + + + L++ R + ++ F K+
Sbjct: 389 SYNSLINWLGKNKLVGEAEELYKEMGERGINPDEYTYVLLIESCFRVDNVDDAVGYFSKM 448
Query: 71 KQSGLTPDAVTYNTV 85
GL P+A +N V
Sbjct: 449 FDVGLRPNANAFNKV 463
>gi|413938248|gb|AFW72799.1| hypothetical protein ZEAMMB73_717335 [Zea mays]
Length = 501
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 42/80 (52%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K S ++Y++ I+ K GN A+ +++ + + NV +++ L GK ++K
Sbjct: 316 KPSTATYNALIQVTCKKGNLEDAVAVFDDMVRKGYIPNVVTYTVLIRGLCHAGKVVRAMK 375
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L D++K G P+ TYN +
Sbjct: 376 LLDRMKSEGCEPNVQTYNVL 395
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 41/80 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + SY++ + LG G KA ++++ ++ E K + N ++ + G E ++
Sbjct: 281 KPDVVSYTTVLHGLGVAGQLDKARKVFDEMSIEGCKPSTATYNALIQVTCKKGNLEDAVA 340
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+FD + + G P+ VTY +
Sbjct: 341 VFDDMVRKGYIPNVVTYTVL 360
>gi|326527465|dbj|BAK08007.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 363
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 43/84 (51%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
+Q + + +YS+ + FL +N +A E++ + E + + N+++S L R G+
Sbjct: 205 KQDCRPNAMTYSTLMHFLCRNCRVDEAFELFERMRKEEIDADTVVYNILVSGLCREGRVT 264
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
S+ LF + G P++ TY +
Sbjct: 265 SAYDLFKSMSSQGCHPNSGTYQVL 288
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y + I K GN KALEI + + +V ++ + L + G+ + +L + +
Sbjct: 573 TYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETM 632
Query: 71 KQSGLTPDAVTYNTVYQ 87
++GL PD VTYNT+ +
Sbjct: 633 LRAGLVPDTVTYNTLLK 649
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 1 MQQHGKT--SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNG 58
M++ G + +YS+ + L K+G A + ++ + NV + +L L + G
Sbjct: 210 MEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAG 269
Query: 59 KFESSLKLFDKIKQSGLTPDAVTYNTV 85
K + + L ++ +SG +P+ VTYNT+
Sbjct: 270 KLDEATALLQRMTRSGCSPNIVTYNTI 296
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+Q+ + ++ +Y + + + G+ A+E+ +T+ + N N I+ L K
Sbjct: 141 IQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKL 200
Query: 61 ESSLKLFDKIKQSG-LTPDAVTYNTVYQS 88
+S+L+LF ++++SG PD TY+T+ S
Sbjct: 201 DSALQLFKEMEESGSCPPDVFTYSTIVDS 229
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 37/75 (49%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I L K+ A+ + + D NVF N +L + + E++L L +++
Sbjct: 46 TYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQM 105
Query: 71 KQSGLTPDAVTYNTV 85
G PD V+Y TV
Sbjct: 106 VMRGCPPDVVSYTTV 120
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 39/80 (48%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ ++ +Y+ + K G + A+ + + ++ N+F N +L + + E + +
Sbjct: 322 QPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQ 381
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L + Q G P+ V+YNTV
Sbjct: 382 LLSSMIQKGCVPNVVSYNTV 401
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 37/77 (48%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ ++S +I +L K G +A E+ ++ + N +L + E ++ LF+
Sbjct: 606 VVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFE 665
Query: 69 KIKQSGLTPDAVTYNTV 85
++Q G PD TY T+
Sbjct: 666 VMRQCGCEPDNATYTTL 682
>gi|242091565|ref|XP_002441615.1| hypothetical protein SORBIDRAFT_09g030420 [Sorghum bicolor]
gi|241946900|gb|EES20045.1| hypothetical protein SORBIDRAFT_09g030420 [Sorghum bicolor]
Length = 229
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
IS+Y+ ++ L +N +AL I+ + + ++ V+ N++++ L++ G+ + + LF
Sbjct: 58 ISTYNIVLRGLCENSCVDEALRIFEGLRSKEFQLEVWTFNIMINALLKVGRIDEAKGLFS 117
Query: 69 KIKQSGLTPDAVTYNTVYQSDHI 91
I SG PD +TY+ + +S HI
Sbjct: 118 AIVLSGPVPDVITYSLMIES-HI 139
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+++++IK L NG A+++ + N+ N +L L R K+E + LF +I
Sbjct: 456 TFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEI 515
Query: 71 KQSGLTPDAVTYNTV 85
+ L P+ VTYNTV
Sbjct: 516 EARNLQPNLVTYNTV 530
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G ++++YS I K+G+ + A E +N + + NV ++ L +N
Sbjct: 375 MQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSM 434
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNT 84
F+ + L +K+ G TP+ +T+NT
Sbjct: 435 FDQANSLVEKMTLEGCTPNTMTFNT 459
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 31 IYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+Y ++ + NVF N++L L +N + +++ KLF ++ G PDAVTY T+ S
Sbjct: 166 LYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSS 223
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ HG +I++Y+ + L + +A ++ I + + N+ N +L R G
Sbjct: 480 MQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGM 539
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+L+LF K G PD++TYNT+ +
Sbjct: 540 MGEALQLFGKALVRGTAPDSITYNTMIHA 568
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 43/78 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I +++ IK G +AL+++ + + + NV N ++ L NG E +L++
Sbjct: 313 NIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVC 372
Query: 68 DKIKQSGLTPDAVTYNTV 85
D++++SG P+ TY+ +
Sbjct: 373 DQMQRSGCLPNVTTYSIL 390
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M HG + ++ +Y+ + L KN +A + +T E N N + L NG+
Sbjct: 410 MISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGR 469
Query: 60 FESSLKLFDKIKQSGLTPDAVTYN 83
E ++KL ++++ G P+ TYN
Sbjct: 470 VEWAMKLLERMQGHGCLPNITTYN 493
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 37/66 (56%)
Query: 23 GNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTY 82
G++ +AL+++ I + K V I N +L L+ KF+ L+ +K+ GL P+ TY
Sbjct: 123 GSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTY 182
Query: 83 NTVYQS 88
N + ++
Sbjct: 183 NILLKA 188
>gi|255567729|ref|XP_002524843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535903|gb|EEF37563.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 524
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFIC--NLILSCLVRNGKFESSLKLFDKI 70
++ I F GK G A+ ++NS+T + IC N ++SCL NG+ + +L +F+ +
Sbjct: 265 TALIDFYGKVGCLNSAIRVFNSMTIKQ------ICSWNAMISCLANNGREKQALDMFEMM 318
Query: 71 KQSGLTPDAVTYNTV 85
++ G +P+ VT+ V
Sbjct: 319 EEKGPSPNEVTFVVV 333
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ S+ +Y+ I L K G A +++ + + VN + N++++ L + G F +
Sbjct: 441 QPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEV 500
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
L K++ +G+ PDAVTY T+ ++
Sbjct: 501 LLSKMENNGIIPDAVTYETIIRA 523
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M +G I +Y+S I L KN + KA+ + I D+ + +++ N+++ L + G+
Sbjct: 400 MHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGR 459
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+++ +F + G + +A TYN +
Sbjct: 460 LKNAQDVFQDLLIKGYSVNAWTYNIM 485
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY + I L K G + AL++ I + +V + N+I++ L ++ + +L+ ++
Sbjct: 166 SYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEM 225
Query: 71 KQSGLTPDAVTYNTV 85
++PD VT+N++
Sbjct: 226 ITKRISPDVVTFNSL 240
>gi|356513139|ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 621
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 1 MQQHG-KTSISSYSSYIK---FLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVR 56
M+++G K + S+Y++ IK +G+ S+K LE+ DE+ K N N+++
Sbjct: 156 MKEYGCKPTTSTYNTLIKGFGIVGRPYESMKLLEMMGQ--DENVKPNDRTYNILIQAWCT 213
Query: 57 NGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
K E + + K+ SG+ PD VTYNT+ ++
Sbjct: 214 KKKLEEAWNVLHKMVASGIQPDVVTYNTMARA 245
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 41/80 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ +Y++ + L + + + + D K + + N +++ +GK + ++K
Sbjct: 92 KPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSDSGKVDEAMK 151
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F K+K+ G P TYNT+
Sbjct: 152 IFQKMKEYGCKPTTSTYNTL 171
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 18 FLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTP 77
+GK G +A +++++T+E K + +++ L R +F+S L K+ +G+ P
Sbjct: 70 LIGK-GKPHEAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKP 128
Query: 78 DAVTYNTV 85
D++ N +
Sbjct: 129 DSILLNAM 136
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 39/77 (50%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ + +NG + KA + + K N C +I+S + G +L+
Sbjct: 236 VVTYNTMARAYAQNGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLY 295
Query: 69 KIKQSGLTPDAVTYNTV 85
++K+ G+ P+ V +N++
Sbjct: 296 RMKELGVHPNPVVFNSL 312
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 37/77 (48%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +YS K + G KA + S++ + NV I I+S GK + + L +
Sbjct: 376 IHAYSILAKGYVRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDRAFSLCE 435
Query: 69 KIKQSGLTPDAVTYNTV 85
K+ + G +P+ TY T+
Sbjct: 436 KMHEMGTSPNLKTYETL 452
>gi|449456671|ref|XP_004146072.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Cucumis sativus]
gi|449503658|ref|XP_004162112.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Cucumis sativus]
Length = 411
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 47/84 (55%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
QQ + ++ ++S+ + L +NG +ALE++ + +E + N+++S L + + E
Sbjct: 226 QQRCRPNVRTFSTLLHGLCENGELGRALELFCKMENEGVCPDTITFNILISGLRKKKRIE 285
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
+++L ++K G P+A TY V
Sbjct: 286 EAIELLGRMKLKGCYPNAGTYQEV 309
Score = 42.0 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 40/70 (57%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGL 75
+K L ++GN AL++ + + + NV + +L L NG+ +L+LF K++ G+
Sbjct: 205 VKGLCQSGNLDAALKVLDEFPQQRCRPNVRTFSTLLHGLCENGELGRALELFCKMENEGV 264
Query: 76 TPDAVTYNTV 85
PD +T+N +
Sbjct: 265 CPDTITFNIL 274
>gi|428176291|gb|EKX45176.1| hypothetical protein GUITHDRAFT_108820 [Guillardia theta CCMP2712]
Length = 700
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGL 75
I G+ KAL + +I DE K + I++ VRNG + ++F+++K G+
Sbjct: 104 ISLHGQRKQLSKALRFFQTIQDEGLKPTDYSYTSIINAYVRNGDIAGAARMFEEMKSKGI 163
Query: 76 TPDAVTYNTVYQ 87
P+ VT+ T+ +
Sbjct: 164 RPNVVTFTTLMK 175
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M Q G + +Y++ I+ L + G+ A EI+ + + N+ N +L L +NGK
Sbjct: 422 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
E ++ +F+ +++S + P TYN + +
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIE 509
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I +Y++ + L KNG KA+ ++ + + ++ N+++ + + GK E LF
Sbjct: 465 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ G+ PD V YNT+
Sbjct: 525 CNLSLKGVKPDVVAYNTM 542
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G + ++ +YSS I L G A + + + + +VF + ++ V+ GK
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ KL+D++ + + P VTY+++
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSL 367
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 44/81 (54%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I +Y+ I+ + K G +++ +++ + K +V N ++S R G E + LF
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
++K+ G P++ YNT+ ++
Sbjct: 560 KEMKEDGTLPNSGCYNTLIRA 580
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 38/74 (51%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ I L KN + AL ++ + + + NV + ++SCL G++ + +L +
Sbjct: 259 YTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 72 QSGLTPDAVTYNTV 85
+ + PD T++ +
Sbjct: 319 ERKINPDVFTFSAL 332
>gi|224100125|ref|XP_002334407.1| predicted protein [Populus trichocarpa]
gi|222872045|gb|EEF09176.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 45/80 (56%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K S+S+YS L ++G + ++ NS+ ++ V L+L +R+GKF+S+L
Sbjct: 62 KHSVSTYSQMFSTLCRSGYLEEVPDLLNSMKNDGVVVGSETFKLLLDAFIRSGKFDSALD 121
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+ D +++ G P+ Y+++
Sbjct: 122 ILDHMEELGSNPNPHMYDSI 141
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 41/74 (55%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+S + + K ++A +++ + + + + + N+++ L +NG+ E+ LF +K
Sbjct: 329 YNSLLDGMFKARKVMEACQLFEKMVQDGVRASCWTYNILIDGLCKNGRAEAGYNLFCGLK 388
Query: 72 QSGLTPDAVTYNTV 85
+ G DAVTY+ V
Sbjct: 389 KKGQFVDAVTYSIV 402
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 39/77 (50%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+S I L G A+ +Y + + + F +++ ++ + E S K+F
Sbjct: 256 LCTYNSLIHVLCLAGKVKDAVIVYEELKVSGHEPDAFTYRILIQGCCKSYQMEDSTKIFS 315
Query: 69 KIKQSGLTPDAVTYNTV 85
+++ +G PD V YN++
Sbjct: 316 EMQYNGFLPDTVVYNSL 332
>gi|3157946|gb|AAC17629.1| Similar to salt-inducible membrane protein gb|U08285 from Nicotiana
tabacum. EST gb|F14010 comes from this gene [Arabidopsis
thaliana]
Length = 364
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M Q G + + SY++ I LG++GN ++L +++ + + +V++ ++ CL ++G
Sbjct: 271 MVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGD 330
Query: 60 FESSLKLFDKIKQS 73
F+S+L+L D++K +
Sbjct: 331 FQSALQLSDELKNT 344
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDE-SDKVNVFICNLILSCLVRNGKFESSL 64
K + +Y+S + LG+ G + L + +++ ++ S VN+ N +L+ + + +F+ L
Sbjct: 206 KPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCL 265
Query: 65 KLFDKIKQSGLTPDAVTYNTVYQS 88
+++++ Q G+ PD ++Y V S
Sbjct: 266 VIYNEMVQCGIEPDLLSYTAVIDS 289
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 47/77 (61%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+S + + ++G++ AL++ + + + K +VF + I+ L R+G ++++ LF
Sbjct: 183 VVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFK 242
Query: 69 KIKQSGLTPDAVTYNTV 85
+++ G+ VTYN++
Sbjct: 243 EMETKGIKSSVVTYNSL 259
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G K+S+ +Y+S ++ L K G + + NV N++L V+ GK
Sbjct: 244 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 303
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + +L+ ++ G++P+ +TYNT+
Sbjct: 304 LQEANELYKEMITRGISPNIITYNTL 329
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Query: 1 MQQHGK-TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M HG + +Y + L NG KALEI+ + + + + I+ + + GK
Sbjct: 419 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 478
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E + LF + G+ P+ +TY +
Sbjct: 479 VEDAWNLFCSLPCKGVKPNVMTYTVM 504
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 41/80 (51%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I Y++ I+ + K G A ++ S+ + K NV +++S L + G + L
Sbjct: 463 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 522
Query: 69 KIKQSGLTPDAVTYNTVYQS 88
K+++ G P+ TYNT+ ++
Sbjct: 523 KMEEDGNAPNDCTYNTLIRA 542
>gi|357134597|ref|XP_003568903.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Brachypodium distachyon]
Length = 537
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 41/80 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y ++I L K G A++++ S+ ++ +V ICN I+ L K +L
Sbjct: 284 KPDLFTYGTFINSLTKAGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKKIPEALD 343
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F ++ G D TYNT+
Sbjct: 344 IFREMTDRGCQADVATYNTL 363
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 23 GNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTY 82
G+ A I+N I K ++F ++ L + GK +++KLF + + G+ PD
Sbjct: 266 GSLPDAKRIWNQIIASKLKPDLFTYGTFINSLTKAGKLSTAVKLFTSMWEKGINPDVAIC 325
Query: 83 NTV 85
N +
Sbjct: 326 NCI 328
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 47/84 (55%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
++ G ++Y Y+ L K G +A + + +V +++++ R G+F+
Sbjct: 257 RKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFD 316
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
+SL+L + ++++G+ PD VTY+T+
Sbjct: 317 ASLELLEDMRRNGVKPDVVTYSTL 340
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 43/76 (56%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I L + + A ++ + +ES NVF ++L+ L R+ K + + ++F ++K
Sbjct: 91 YNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMK 150
Query: 72 QSGLTPDAVTYNTVYQ 87
++G P+ +TY T+ Q
Sbjct: 151 RNGCKPNPITYGTLIQ 166
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 43/81 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+S + L K+G + +Y + +V ++I++ L + G +S++KLF
Sbjct: 368 NVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLF 427
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
+ IK S PDA Y+ V S
Sbjct: 428 ELIKSSREGPDAAAYSMVITS 448
Score = 38.9 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 40/77 (51%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +YS I + G +LE+ + K +V + +++ L + KF+ + +L +
Sbjct: 299 VVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLE 358
Query: 69 KIKQSGLTPDAVTYNTV 85
++ +G P+ VTYN+V
Sbjct: 359 LMEAAGSPPNVVTYNSV 375
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+++G K + +YS+ I L K A + + NV N ++ L ++GK
Sbjct: 325 MRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGK 384
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++++ + +S +PD VTY+ +
Sbjct: 385 MDEVHRVYEMMLKSRCSPDVVTYSII 410
>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
Length = 538
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 47/84 (55%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
++ G ++Y Y+ L K G +A + + +V +++++ R G+F+
Sbjct: 257 RKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFD 316
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
+SL+L + ++++G+ PD VTY+T+
Sbjct: 317 ASLELLEDMRRNGVKPDVVTYSTL 340
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 43/76 (56%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I L + + A ++ + +ES NVF ++L+ L R+ K + + ++F ++K
Sbjct: 91 YNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMK 150
Query: 72 QSGLTPDAVTYNTVYQ 87
++G P+ +TY T+ Q
Sbjct: 151 RNGCKPNPITYGTLIQ 166
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 43/81 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+S + L K+G + +Y + +V ++I++ L + G +S++KLF
Sbjct: 368 NVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLF 427
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
+ IK S PDA Y+ V S
Sbjct: 428 ELIKSSREGPDAAAYSMVITS 448
Score = 38.9 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 40/77 (51%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +YS I + G +LE+ + K +V + +++ L + KF+ + +L +
Sbjct: 299 VVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLE 358
Query: 69 KIKQSGLTPDAVTYNTV 85
++ +G P+ VTYN+V
Sbjct: 359 LMEAAGSPPNVVTYNSV 375
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+++G K + +YS+ I L K A + + NV N ++ L ++GK
Sbjct: 325 MRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGK 384
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++++ + +S +PD VTY+ +
Sbjct: 385 MDEVHRVYEMMLKSRCSPDVVTYSII 410
>gi|293333002|ref|NP_001168049.1| uncharacterized protein LOC100381779 [Zea mays]
gi|223945693|gb|ACN26930.1| unknown [Zea mays]
gi|414871082|tpg|DAA49639.1| TPA: hypothetical protein ZEAMMB73_603879 [Zea mays]
Length = 582
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 43/77 (55%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y++ + + K G +AL I++SI + +V N ++ L + G +++ LFD
Sbjct: 403 IVTYNTLLNAISKRGMVQEALGIFHSIRENGCQVVRITYNTLIDALAKRGDIINAMTLFD 462
Query: 69 KIKQSGLTPDAVTYNTV 85
++ G+ PD VTY ++
Sbjct: 463 EMIVDGINPDDVTYGSL 479
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 46/84 (54%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q + K +++Y+ +I + + G+ +A+++ + E ++ N +L+ + + G +
Sbjct: 361 QANHKPDVTAYNIFINYFCRYGHLDQAIDVLEMMVSEKCFPDIVTYNTLLNAISKRGMVQ 420
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
+L +F I+++G +TYNT+
Sbjct: 421 EALGIFHSIRENGCQVVRITYNTL 444
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 38/70 (54%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGL 75
I+ L + GN+ KA + + + CN+++ L G+ S++K+ + ++ +G
Sbjct: 165 IRGLVRTGNTNKARHVLEVMVLSGGVPDTITCNMLIGQLCCEGQLSSAMKVLEDMRFTGC 224
Query: 76 TPDAVTYNTV 85
+P +T+NT+
Sbjct: 225 SPSGITFNTL 234
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YSS I +G+ +A + + + N+ N ++ L ++GK ++ LF+K+
Sbjct: 737 TYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKL 796
Query: 71 KQSGLTPDAVTYNTV 85
+ G++P+ +TYNT+
Sbjct: 797 QSKGISPNGITYNTL 811
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y I + G A + N + D VN+F+ N +++ L + G+ E K+ ++
Sbjct: 326 AYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEM 385
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ PD +YNT+
Sbjct: 386 EDVGMRPDKYSYNTL 400
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 40/78 (51%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I +Y+S I L K+G +A+ ++N + + N N ++ + GK + KL
Sbjct: 769 NIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLK 828
Query: 68 DKIKQSGLTPDAVTYNTV 85
K+ + G+ P +TY+ +
Sbjct: 829 QKMVEEGIQPTVITYSIL 846
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 40/76 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
S S+ + L K G + +AL ++ NV N +++ L + G+ + +L D++
Sbjct: 466 SCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRM 525
Query: 71 KQSGLTPDAVTYNTVY 86
K+ PD++TY T++
Sbjct: 526 KELRCPPDSLTYRTLF 541
Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 35/70 (50%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y + I K GN +A +Y + + NVFIC+ ++SC + GK + + +
Sbjct: 603 NLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVL 662
Query: 68 DKIKQSGLTP 77
K+ + P
Sbjct: 663 QKLVNIDMIP 672
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I K G + +A ++ + +E + V ++++ L G E ++KL D++
Sbjct: 807 TYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQM 866
Query: 71 KQSGLTPDAVTYNTV 85
++ + P+ +TY T+
Sbjct: 867 IENNVDPNYITYCTL 881
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YSS I +G+ +A + + + N+ N ++ L ++GK ++ LF+K+
Sbjct: 737 TYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKL 796
Query: 71 KQSGLTPDAVTYNTV 85
+ G++P+ +TYNT+
Sbjct: 797 QSKGISPNGITYNTL 811
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y I + G A + N + D VN+F+ N +++ L + G+ E K+ ++
Sbjct: 326 AYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEM 385
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ PD +YNT+
Sbjct: 386 EDVGMRPDKYSYNTL 400
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 40/76 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
S S+ + L K G + +AL ++ NV N +++ L + G+ + +L D++
Sbjct: 466 SCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRM 525
Query: 71 KQSGLTPDAVTYNTVY 86
K+ PD++TY T++
Sbjct: 526 KELRCPPDSLTYRTLF 541
Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 35/70 (50%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y + I K GN +A +Y + + NVFIC+ ++SC + GK + + +
Sbjct: 603 NLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVL 662
Query: 68 DKIKQSGLTP 77
K+ + P
Sbjct: 663 QKLVNIDMIP 672
>gi|414585491|tpg|DAA36062.1| TPA: hypothetical protein ZEAMMB73_917988 [Zea mays]
gi|414585492|tpg|DAA36063.1| TPA: hypothetical protein ZEAMMB73_917988 [Zea mays]
Length = 787
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 45/85 (52%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
G+ + YS + L K G A+ +Y + +V+ + ++ LVR+GK ++ +
Sbjct: 297 GRAPVGVYSVMVDVLAKAGRLDAAMGMYREMVVVGHRVSTAVSTAMVEALVRSGKLDAGM 356
Query: 65 KLFDKIKQSGLTPDAVTYNTVYQSD 89
+L++++++ GL P Y V +++
Sbjct: 357 ELWEEMRRGGLRPSFGLYTMVVEAN 381
>gi|255660938|gb|ACU25638.1| pentatricopeptide repeat-containing protein [Citharexylum
montevidense]
Length = 481
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G + +I SY K + + G + A +N + E + N+++ +GK
Sbjct: 106 MEELGVERTIKSYDVLFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNIMIWGFFLSGK 165
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E++ + F+ +K +TPD +TYNT+
Sbjct: 166 VETAXRFFEDMKSRDITPDVITYNTM 191
>gi|222617300|gb|EEE53432.1| hypothetical protein OsJ_36514 [Oryza sativa Japonica Group]
Length = 607
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G S+ +YS+ I K G A +Y + K +V + + + L +NG
Sbjct: 218 MRKRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGL 277
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E +L L + + + G+ P+ VTYN +
Sbjct: 278 IEWALSLLNDMTEMGIKPNVVTYNAI 303
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y+++I + K GN A+++ + + K NV + ++ + K+E +LKL +
Sbjct: 87 IYTYNTFIDAICKCGNMELAMQVLLDMEAKGVKPNVVTYSTLIDGYSKLEKYEEALKLCE 146
Query: 69 KIKQSGLTPDAVTYNTV 85
K+K + D V YNT+
Sbjct: 147 KMKSMRIQLDRVCYNTL 163
Score = 34.7 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 1 MQQHG-KTSISSYSSYI---KFLGKNGNSLKALEIYNSITDESDKVNVFIC-NLILSCLV 55
M+ G K ++ +YS+ I L K +LK E S+ + D+V C N +L+ V
Sbjct: 113 MEAKGVKPNVVTYSTLIDGYSKLEKYEEALKLCEKMKSMRIQLDRV----CYNTLLAIYV 168
Query: 56 RNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
+ GK+ + D++++ G+ D VTYN++
Sbjct: 169 KAGKYAEIANVCDEMEELGIEKDTVTYNSL 198
>gi|125569816|gb|EAZ11331.1| hypothetical protein OsJ_01195 [Oryza sativa Japonica Group]
Length = 943
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 2 QQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+Q+G ++ YS ++ L K+G KAL++ S+ +E + N+ I N +L+ L + G
Sbjct: 566 EQNGYSVDLAMYSILVEGLCKSGYLEKALDLCESMKEEGIQPNIVIHNSVLNGLCQQGCL 625
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +LFD ++ S + P VTY+ +
Sbjct: 626 TEAFRLFDYLESSEVLPTLVTYSIL 650
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 31/116 (26%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITD---------------------- 37
M + G K I +Y+S I L K G++ KA+EIY I
Sbjct: 223 MDKKGIKIGIVTYNSVINGLCKVGHTKKAVEIYEGIAADNFTYSTLLHGHIKVEDATGVM 282
Query: 38 ------ESDKV--NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
ES V +V CN+++ L K + + LF ++ + L P+ VTY+TV
Sbjct: 283 AIKGRLESSGVTIDVVTCNVLIKALFMIKKVDDACSLFLRMPEMRLRPNIVTYHTV 338
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 41/77 (53%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ +I +Y + I + K G + +AL++++ ++ + + N ++ L GK + +
Sbjct: 329 RPNIVTYHTVIDMMCKLGETDRALQLFDDYKEDILFSSTIVHNCLIIALCNGGKVNMAEQ 388
Query: 66 LFDKIKQSGLTPDAVTY 82
+F+ + Q L PD+ TY
Sbjct: 389 IFNDLIQRNLRPDSCTY 405
>gi|302796396|ref|XP_002979960.1| hypothetical protein SELMODRAFT_12814 [Selaginella moellendorffii]
gi|300152187|gb|EFJ18830.1| hypothetical protein SELMODRAFT_12814 [Selaginella moellendorffii]
Length = 220
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 43/74 (58%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ + L K+G +AL++ +S+ S +++ N++++ L + G + ++ LF ++
Sbjct: 55 YNIILTHLCKHGKEKEALDLLHSMATTSCAPDIYTYNILINALCKAGMMDKAMDLFVEMP 114
Query: 72 QSGLTPDAVTYNTV 85
G PD VTYN++
Sbjct: 115 TRGCIPDVVTYNSI 128
>gi|195650415|gb|ACG44675.1| hypothetical protein [Zea mays]
Length = 558
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 44/80 (55%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ S++++S+ + L K G KA+E+ +++ + + N ++ L G+ E +L+
Sbjct: 209 RPSVATFSAVVGCLCKRGRVTKAMEVLDAMLGLGCEPTIRTYNSLVGGLCYVGRLEEALE 268
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L K+K S LTPD T+ V
Sbjct: 269 LLKKLKDSPLTPDIYTFTIV 288
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 37/78 (47%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I +Y+S + L G +ALE+ + D +++ ++L + G+ E + +F
Sbjct: 246 TIRTYNSLVGGLCYVGRLEEALELLKKLKDSPLTPDIYTFTIVLDGFCKVGRTEEATAIF 305
Query: 68 DKIKQSGLTPDAVTYNTV 85
GL+P TYN +
Sbjct: 306 HDAIGMGLSPTTFTYNAL 323
>gi|212275248|ref|NP_001130560.1| uncharacterized protein LOC100191659 [Zea mays]
gi|194689480|gb|ACF78824.1| unknown [Zea mays]
Length = 558
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 44/80 (55%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ S++++S+ + L K G KA+E+ +++ + + N ++ L G+ E +L+
Sbjct: 209 RPSVATFSAVVGCLCKRGRVTKAMEVLDAMLGLGCEPTIRTYNSLVGGLCYVGRLEEALE 268
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L K+K S LTPD T+ V
Sbjct: 269 LLKKLKDSPLTPDIYTFTIV 288
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 37/78 (47%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I +Y+S + L G +ALE+ + D +++ ++L + G+ E + +F
Sbjct: 246 TIRTYNSLVGGLCYVGRLEEALELLKKLKDSPLTPDIYTFTIVLDGFCKVGRTEEATAIF 305
Query: 68 DKIKQSGLTPDAVTYNTV 85
GL+P TYN +
Sbjct: 306 HDAIGMGLSPTTFTYNAL 323
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M Q G + + +Y + + L K G+ AL + N + K NV I N I+ L +
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRH 273
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E ++ LF +++ G+ P+ VTYN++
Sbjct: 274 VEVAVDLFTEMETKGIRPNVVTYNSL 299
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
T I +YS + L G AL I+ + ++N+FI N ++ + + GK + L
Sbjct: 466 TDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL 525
Query: 67 FDKIKQSGLTPDAVTYNTV 85
F + + PD VTYNT+
Sbjct: 526 FCSL---SIKPDVVTYNTM 541
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G + ++ +Y+S I L G A + +++ ++ NV N ++ + GK
Sbjct: 284 METKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGK 343
Query: 60 FESSLKLFDKIKQSGLTPDAVTYN 83
+ KL +++ Q + PD +TYN
Sbjct: 344 LVEAEKLHEEMIQRSIDPDTITYN 367
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ I+ + K G +A +++ S++ + D V N ++S L + + LF K+K
Sbjct: 506 YNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTY---NTMISGLCSKRLLQEADDLFRKMK 562
Query: 72 QSGLTPDAVTYNTVYQSD 89
+ G P++ TYNT+ +++
Sbjct: 563 EDGTLPNSGTYNTLIRAN 580
>gi|326513116|dbj|BAK06798.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M + G T S+++Y++ I+ + K GN A+ +++ + + NV +++ L GK
Sbjct: 298 MSKEGCTPSVATYNALIQVICKKGNVEDAVTVFDDMVRKDYMPNVVTYTVLIRGLCHVGK 357
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++KL +++K G P TYN +
Sbjct: 358 IDRAMKLMERMKGEGCEPVVQTYNVL 383
Score = 40.8 bits (94), Expect = 0.098, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 41/80 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K I SY++ I LG G KA ++++ ++ E +V N ++ + + G E ++
Sbjct: 269 KPDIVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCTPSVATYNALIQVICKKGNVEDAVT 328
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+FD + + P+ VTY +
Sbjct: 329 VFDDMVRKDYMPNVVTYTVL 348
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 37 DESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
DES K ++ I+ L G+ + + KLFD++ + G TP TYN + Q
Sbjct: 265 DESCKPDIVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCTPSVATYNALIQ 315
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 46/87 (52%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ + + +Y+ I+ LGK G +A + + E + + + N +++ L + G+ +
Sbjct: 293 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLD 352
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTVYQS 88
++KLF ++ P VTYNT+ ++
Sbjct: 353 DAMKLFQEMGTLRCIPSVVTYNTIIKA 379
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 41/81 (50%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
G +S Y+ IK LGK G A+ +++ + +V+ N ++S L R G + +L
Sbjct: 472 GSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEAL 531
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
++++ G PD +YN +
Sbjct: 532 STMRRMQEHGCIPDINSYNII 552
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 38/76 (50%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y S I LGK A E++ + + + + +++ L + G+ + ++ +FD+
Sbjct: 442 AAYCSLIDALGKAKRYDLACELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDE 501
Query: 70 IKQSGLTPDAVTYNTV 85
+ + G PD YN +
Sbjct: 502 MNKLGCAPDVYAYNAL 517
>gi|125536310|gb|EAY82798.1| hypothetical protein OsI_38004 [Oryza sativa Indica Group]
Length = 669
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 15 YIKFLGKNGNSLKALEIYNSITD-ESDKV--NVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y LG NS + I++ + D E+ + NV N ++S V GK + ++FD I+
Sbjct: 150 YNCLLGAVKNSGEFGRIHDVLADMEAQGIPPNVVTFNTLMSIYVEQGKIDEVFRVFDTIE 209
Query: 72 QSGLTPDAVTYNTVYQS 88
SGL P A TY+TV S
Sbjct: 210 GSGLVPTAATYSTVMSS 226
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILS-------CLVRN 57
G S+S + I +GK ALEIY + D+ K N LI+S R
Sbjct: 340 GVISLSVCNHLIWLMGKAKKWWAALEIYEDLLDKGPKPNNLSYELIMSHFNILLNAAKRR 399
Query: 58 GKFESSLKLFDKIKQSGLTPDAVTYNTV 85
G + ++L DK++Q GL P + +N V
Sbjct: 400 GIWRWGVRLLDKMQQKGLKPGSREWNAV 427
>gi|242060656|ref|XP_002451617.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
gi|241931448|gb|EES04593.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
Length = 593
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 46/87 (52%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
++ +T+ +Y+ I GK + +L+++N + K N+ +++ R G E
Sbjct: 263 KERCRTNTETYTLMINVYGKAKQPMSSLKVFNEMKTIGCKPNICTYTALVNAFAREGLCE 322
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+ ++F++++Q+G PD YN + ++
Sbjct: 323 KAEEVFEEMQQAGHEPDVYAYNALMEA 349
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ++G + + Y++Y+ L K S KA+E+Y + E + N L+++ + +
Sbjct: 226 MQKNGLPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKAKQ 285
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
SSLK+F+++K G P+ TY +
Sbjct: 286 PMSSLKVFNEMKTIGCKPNICTYTAL 311
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 39/80 (48%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K +I +Y++ + + G KA E++ + + +V+ N ++ R G + + +
Sbjct: 302 KPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASE 361
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F ++ G PD +YN +
Sbjct: 362 IFSLMEHMGCEPDRASYNIL 381
>gi|42568859|ref|NP_178248.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546783|sp|Q9ZU29.2|PP139_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01390
gi|330250351|gb|AEC05445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ +G + ++ SY++Y+K L +G +A E+Y + N +++ LV GK
Sbjct: 183 MRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGK 242
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E +L +F K+++ G+ PD N +
Sbjct: 243 CEEALDIFFKMQEIGVQPDKAACNIL 268
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ++G + +Y+ I K GN KALE++ ++ + + ++ R G+
Sbjct: 280 MQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQ 339
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+ + +LF+ + G+ PD V YN + S
Sbjct: 340 VQETDRLFNVAVKKGIRPDVVMYNALINS 368
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M Q G + + +Y+S I + G + ++N + + +V + N +++ G
Sbjct: 315 MSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGD 374
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E + ++ ++++ + PD +TYNT+
Sbjct: 375 MERAYEIMAEMEKKRIPPDDMTYNTL 400
>gi|326503836|dbj|BAK02704.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 399
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 46/87 (52%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
++ +T+ +Y+ I GK+ + A++++ + K N+ +++ R G E
Sbjct: 77 RERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQSIGCKANICTYTALVNAFAREGLCE 136
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+ ++F++++Q+G PD YN + ++
Sbjct: 137 KAEEVFEEMQQAGHEPDVYAYNALMEA 163
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ G K +I +Y++ + + G KA E++ + + +V+ N ++ R G
Sbjct: 110 MQSIGCKANICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGF 169
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+++ ++F ++ G PD +YN +
Sbjct: 170 PQAASEIFSLMQHMGCEPDRASYNIL 195
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++HG S + Y++Y+ L K + KA+E+Y + E + N L+++ ++ +
Sbjct: 40 MREHGIPPSATVYNAYLDGLLKARCAEKAVEVYQRMKRERCRTNTETYTLMINVYGKSKQ 99
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
S++K+F +++ G + TY +
Sbjct: 100 PMSAMKVFKEMQSIGCKANICTYTAL 125
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G K +I +Y+S I L NG +A+++++ + K N+ N +++ +
Sbjct: 299 MQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKM 358
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + K+FD + + L P+ +T+NT+
Sbjct: 359 MKEATKVFDDVSKQELVPNVITFNTM 384
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
++++ I K+ N A + + + + K N+ N +++ L NGK E ++ L+DK+
Sbjct: 275 TFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKM 334
Query: 71 KQSGLTPDAVTYNTV 85
GL P+ VTYN +
Sbjct: 335 VGLGLKPNIVTYNAL 349
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 45/78 (57%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++S+Y+ I L + + A E+ N + ++ K +V N+++ L +N K ++ KL
Sbjct: 412 NVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLL 471
Query: 68 DKIKQSGLTPDAVTYNTV 85
+++ GL P+ VTYNT+
Sbjct: 472 NEMFNLGLKPNHVTYNTL 489
>gi|357155105|ref|XP_003577009.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13800-like [Brachypodium distachyon]
Length = 821
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 35/75 (46%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I YS I+ K GN LK L+ Y ++ + N I + +L C + G + F
Sbjct: 330 IYGYSYLIRSYCKVGNLLKVLDHYQAMVSHGLEANCHIMSYLLQCFTKLGMASQVTEYFQ 389
Query: 69 KIKQSGLTPDAVTYN 83
K + SGL D V YN
Sbjct: 390 KFRDSGLHIDGVLYN 404
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 38/83 (45%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +SS+I L + G A I I E +V N+++ L + + E K
Sbjct: 257 KPDVHGHSSFIIGLCECGKIDLAYAILQEIIREKVQVEAIAFNVVMDGLCKEMRLEEVEK 316
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
L + + GLTPD Y+ + +S
Sbjct: 317 LLENKVRQGLTPDIYGYSYLIRS 339
>gi|255660964|gb|ACU25651.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 376
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ G +YS+ I L K N +AL + + K N+ + N +++ LV KFE
Sbjct: 122 QKGGVLDAFAYSAMINGLCKEANLDRALYVLTGMIKSGCKPNIHVYNTLINGLVGASKFE 181
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
++++F ++ +P +TYNT+
Sbjct: 182 DAIRVFREMGTMHCSPTIITYNTL 205
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 45/81 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+ +YS +K L + +AL+++N +T + K +V + N+++ L GK + +L L+
Sbjct: 233 GVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLY 292
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
+ + P+ V++NT+ +
Sbjct: 293 FDMNRRKCAPNLVSHNTLMEG 313
>gi|15221893|ref|NP_173324.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42571539|ref|NP_973860.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75151479|sp|Q8GYP6.1|PPR49_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18900
gi|26450017|dbj|BAC42129.1| unknown protein [Arabidopsis thaliana]
gi|28827402|gb|AAO50545.1| unknown protein [Arabidopsis thaliana]
gi|332191657|gb|AEE29778.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191658|gb|AEE29779.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS I LGK G+ A +++ + D+ N+ N+++ + ++++LKL+ +
Sbjct: 471 TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM 530
Query: 71 KQSGLTPDAVTYNTVYQ 87
+ +G PD VTY+ V +
Sbjct: 531 QNAGFEPDKVTYSIVME 547
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G K +Y + I K G A+++Y + + F ++I++CL + G
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 60 FESSLKLFDKIKQSGLTPDAVTYN 83
++ KLF ++ G TP+ VTYN
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYN 508
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 32/71 (45%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y + GK GN KA + Y ++ + NV CN +LS +R K + +L +
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Query: 72 QSGLTPDAVTY 82
GL P TY
Sbjct: 637 ALGLRPSLQTY 647
>gi|356498649|ref|XP_003518162.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Glycine max]
Length = 1034
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 42/77 (54%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+Q G T SYS +I+ L + G +AL ++ + +E ++ I+ L+R G+
Sbjct: 814 LQNFGYTVPLSYSLFIRALCRAGKVEEALALHEEVGEEKFIIDQLTFGSIVHGLLRKGRL 873
Query: 61 ESSLKLFDKIKQSGLTP 77
E +L D +KQ+G+TP
Sbjct: 874 EEALAKVDVMKQNGITP 890
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 40/78 (51%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I +YS+ I+ G + A +I+ + + + ++ L+CL + GK E ++L
Sbjct: 926 TIVTYSALIRGYMNVGRPIDAWDIFYRMKLKGPFPDFKTYSMFLTCLCKVGKSEEGMRLI 985
Query: 68 DKIKQSGLTPDAVTYNTV 85
++ SG+ P + + TV
Sbjct: 986 SEMLDSGIVPSTINFRTV 1003
>gi|347954458|gb|AEP33729.1| chlororespiratory reduction 21, partial [Brassica rapa]
Length = 788
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 45/74 (60%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
+++ + ++G S +AL ++ + ES NV NLI+ L+RNG+ + + K+F +++
Sbjct: 400 WNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVDEAKKMFLQMQ 459
Query: 72 QSGLTPDAVTYNTV 85
SG+ P V++ T+
Sbjct: 460 SSGIVPTIVSWTTM 473
>gi|334182677|ref|NP_001185030.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191659|gb|AEE29780.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 886
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS I LGK G+ A +++ + D+ N+ N+++ + ++++LKL+ +
Sbjct: 471 TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM 530
Query: 71 KQSGLTPDAVTYNTVYQ 87
+ +G PD VTY+ V +
Sbjct: 531 QNAGFEPDKVTYSIVME 547
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G K +Y + I K G A+++Y + + F ++I++CL + G
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 60 FESSLKLFDKIKQSGLTPDAVTYN 83
++ KLF ++ G TP+ VTYN
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYN 508
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 32/71 (45%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y + GK GN KA + Y ++ + NV CN +LS +R K + +L +
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Query: 72 QSGLTPDAVTY 82
GL P TY
Sbjct: 637 ALGLRPSLQTY 647
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 46/84 (54%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
++ H ++ +Y++ + L K G + A+++ + + D+ N++ N+I+ L K
Sbjct: 72 VKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKL 131
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNT 84
+ + K+ +++ G PD VTYN+
Sbjct: 132 DEAKKMLEEMAVRGYFPDVVTYNS 155
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M G T + +YSS I K G +A+ + +S+ + N+ N +L L R G
Sbjct: 208 MTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGH 267
Query: 60 FESSLKLFDKIKQSGLTPDAVTYN 83
+ + ++++ G TPD V+YN
Sbjct: 268 IGKAEDMLVEMERRGFTPDVVSYN 291
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 42/82 (51%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ SY++ I L K+G+ A + + +T+ +V + ++ + G+ E ++ L D
Sbjct: 182 VVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLD 241
Query: 69 KIKQSGLTPDAVTYNTVYQSDH 90
+ + G P+ V YN++ + H
Sbjct: 242 SMLKLGCRPNMVAYNSLLGALH 263
>gi|12039381|gb|AAG46167.1|AC018727_19 unknown protein [Oryza sativa Japonica Group]
Length = 601
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 53/85 (62%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+ ++ L + G A E++ S++ + ++ + N+++ C+ ++ +++++L ++
Sbjct: 278 TVVTYTPIVRALYRAGRHDIATELFASMSSTNCSPDLVLHNVLMDCMTKDKRYDAALGVY 337
Query: 68 DKIKQSGLTPDAVTYNTVYQSDHIT 92
+ +S + PDA T +T+ ++ H++
Sbjct: 338 LNLHESQMKPDAYTLSTLVRALHLS 362
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 19 LGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPD 78
L K G++ AL I N ++ ++ ++L L++ E + LFDK+K+SG+ +
Sbjct: 462 LVKKGHNRMALMILNEAVRQNYALDAVCYTVVLHGLLQAHLIEEACMLFDKMKRSGMASN 521
Query: 79 AVTYN 83
TYN
Sbjct: 522 TCTYN 526
>gi|14488297|gb|AAK63878.1|AC074105_7 Putative salt-inducible protein [Oryza sativa]
gi|222612440|gb|EEE50572.1| hypothetical protein OsJ_30721 [Oryza sativa Japonica Group]
Length = 854
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I + GN +AL++ + ++F N+++ R G ++ LF +
Sbjct: 578 TYNSLISAFCRAGNVSEALKLEQKMRQSGLVPDIFTRNILIDGFCREGGLNTANNLFFGM 637
Query: 71 KQSGLTPDAVTYNTVYQS 88
GLTPD VTYNT+ +
Sbjct: 638 YSIGLTPDVVTYNTMLNA 655
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
N F N ++S R G +LKL K++QSGL PD T N +
Sbjct: 575 NNFTYNSLISAFCRAGNVSEALKLEQKMRQSGLVPDIFTRNIL 617
>gi|410109867|gb|AFV61013.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia salsoloides]
Length = 410
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
++++ I KNG A+EIY + +S ++ N ++ L + G + + L D++
Sbjct: 235 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEM 294
Query: 71 KQSGLTPDAVTYNTV 85
+ GL PD +TY T+
Sbjct: 295 RMKGLKPDKITYTTL 309
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTS-ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M G+ + + +YSS I L KNG+ +A+ ++N + D+ + N F ++L L + G+
Sbjct: 400 MHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGR 459
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + ++F + G + TYN +
Sbjct: 460 LKDAQEVFQDLLTKGYHLNVYTYNVM 485
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q++ I +YSS I L K+G ++ + + D NV + ++ L +NG +
Sbjct: 367 QKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLD 426
Query: 62 SSLKLFDKIKQSGLTPDAVTY 82
++ LF+K+K G+ P+ T+
Sbjct: 427 RAIALFNKMKDQGIRPNTFTF 447
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY + I + K G++ A+++ I K +V + N I+ L ++ + LF ++
Sbjct: 1033 SYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEM 1092
Query: 71 KQSGLTPDAVTYNTV 85
G++ D VTYNT+
Sbjct: 1093 NVKGISADVVTYNTL 1107
>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
Length = 821
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ ++ GK G +AL I + D + + N +++ VR G +E L D +
Sbjct: 317 TYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTM 376
Query: 71 KQSGLTPDAVTYNTV 85
++G+ P+AVTY T+
Sbjct: 377 TENGIKPNAVTYTTM 391
Score = 41.6 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 39/69 (56%)
Query: 17 KFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLT 76
+ LG+ A ++++ I + ++V IL R GK+E ++ +F+K+ +SGL+
Sbjct: 182 RILGRESQHSIASKLFDVIPLDDYSLDVRAYTTILHSYSRCGKYERAVAIFEKMNESGLS 241
Query: 77 PDAVTYNTV 85
P VTYN +
Sbjct: 242 PTLVTYNVM 250
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 35/74 (47%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S + + G KA EI + + DK ++ N ++ R G +L+ ++
Sbjct: 667 TYNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEM 726
Query: 71 KQSGLTPDAVTYNT 84
G+ P VTYNT
Sbjct: 727 ISRGIRPCIVTYNT 740
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 8 SISSYSSYIKFLGKNGNSL-KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
++ +Y+ + GK G S K L + + + + + F C+ ++S R G + + +
Sbjct: 243 TLVTYNVMLDVYGKMGRSWNKILGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEAKEF 302
Query: 67 FDKIKQSGLTPDAVTYNTVYQ 87
F +K G P VTYN + Q
Sbjct: 303 FVGLKSQGYAPGTVTYNALLQ 323
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 39/78 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
++++ I G+ G+ + A +IY+ + + +V N +L+ L R G + ++ + +
Sbjct: 492 TFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDM 551
Query: 71 KQSGLTPDAVTYNTVYQS 88
K G P +Y+ + S
Sbjct: 552 KNKGFKPSETSYSLILNS 569
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 31/55 (56%)
Query: 31 IYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +++T+ K N +++ R + + +L L+D++K+SG P+ TYN +
Sbjct: 372 LIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAI 426
>gi|222613334|gb|EEE51466.1| hypothetical protein OsJ_32592 [Oryza sativa Japonica Group]
Length = 706
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 53/85 (62%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+ ++ L + G A E++ S++ + ++ + N+++ C+ ++ +++++L ++
Sbjct: 353 TVVTYTPIVRALYRAGRHDIATELFASMSSTNCSPDLVLHNVLMDCMTKDKRYDAALGVY 412
Query: 68 DKIKQSGLTPDAVTYNTVYQSDHIT 92
+ +S + PDA T +T+ ++ H++
Sbjct: 413 LNLHESQMKPDAYTLSTLVRALHLS 437
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 19 LGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPD 78
L K G++ AL I N ++ ++ ++L L++ E + LFDK+K+SG+ +
Sbjct: 537 LVKKGHNRMALMILNEAVRQNYALDAVCYTVVLHGLLQAHLIEEACMLFDKMKRSGMASN 596
Query: 79 AVTYN 83
TYN
Sbjct: 597 TCTYN 601
>gi|125533078|gb|EAY79643.1| hypothetical protein OsI_34787 [Oryza sativa Indica Group]
Length = 631
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 53/85 (62%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+ ++ L + G A E++ S++ + ++ + N+++ C+ ++ +++++L ++
Sbjct: 278 TVVTYTPIVRALYRAGRHDIATELFASMSSTNCSPDLVLHNVLMDCMTKDKRYDAALGVY 337
Query: 68 DKIKQSGLTPDAVTYNTVYQSDHIT 92
+ +S + PDA T +T+ ++ H++
Sbjct: 338 LNLHESQMKPDAYTLSTLVRALHLS 362
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 19 LGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPD 78
L K G++ AL I N ++ ++ ++L L++ E + LFDK+K+SG+ +
Sbjct: 462 LVKKGHNRMALMILNEAVRQNYALDAVCYTVVLHGLLQAHLIEEACMLFDKMKRSGMASN 521
Query: 79 AVTYN 83
TYN
Sbjct: 522 TCTYN 526
>gi|110289653|gb|AAP55169.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 631
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 53/85 (62%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+ ++ L + G A E++ S++ + ++ + N+++ C+ ++ +++++L ++
Sbjct: 278 TVVTYTPIVRALYRAGRHDIATELFASMSSTNCSPDLVLHNVLMDCMTKDKRYDAALGVY 337
Query: 68 DKIKQSGLTPDAVTYNTVYQSDHIT 92
+ +S + PDA T +T+ ++ H++
Sbjct: 338 LNLHESQMKPDAYTLSTLVRALHLS 362
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 19 LGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPD 78
L K G++ AL I N ++ ++ ++L L++ E + LFDK+K+SG+ +
Sbjct: 462 LVKKGHNRMALMILNEAVRQNYALDAVCYTVVLHGLLQAHLIEEACMLFDKMKRSGMASN 521
Query: 79 AVTYN 83
TYN
Sbjct: 522 TCTYN 526
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 46/80 (57%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++++Y+ I ++G+ A + + + ++ + +V N+++ L G+ ++KL
Sbjct: 403 NVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLL 462
Query: 68 DKIKQSGLTPDAVTYNTVYQ 87
D++ + GL P+ +TYNT+ Q
Sbjct: 463 DEMSEVGLEPNHLTYNTIIQ 482
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 37/67 (55%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
KN N+ A+ ++ + + +V N ++S L GK E +KL ++++ GL+P+ +
Sbjct: 276 KNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEI 335
Query: 81 TYNTVYQ 87
T+ V +
Sbjct: 336 TFGCVLK 342
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 37/74 (50%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I + G A+ + ++ + NV N +++ R+G + S+ L D++K
Sbjct: 372 YNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK 431
Query: 72 QSGLTPDAVTYNTV 85
+ G+ D VTYN +
Sbjct: 432 EKGIEADVVTYNVL 445
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 39/73 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
++ +K K G A + + +T+ + + +V I N+++ R GK E ++ + + +
Sbjct: 336 TFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAM 395
Query: 71 KQSGLTPDAVTYN 83
+ G++P+ TYN
Sbjct: 396 AKKGISPNVTTYN 408
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G K ++ SY S + KNG L+A+ I + + + + N I+ + G
Sbjct: 459 MQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGS 518
Query: 60 FESSLKLFDKIKQSGLTPDAVTYN 83
+ + L +K+K SG+ P VTYN
Sbjct: 519 TDQAFMLAEKMKSSGVPPSIVTYN 542
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 37/75 (49%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS + G+S L ++ + K+ + C+++L+ L ++GK + ++ +
Sbjct: 295 TYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTL 354
Query: 71 KQSGLTPDAVTYNTV 85
SGL V YNT+
Sbjct: 355 VNSGLLQTTVIYNTL 369
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 37/76 (48%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I K G+ +++ + K NV N++LS L R G+ + + D++
Sbjct: 225 TYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEM 284
Query: 71 KQSGLTPDAVTYNTVY 86
+ PD TY+ ++
Sbjct: 285 ASRKMVPDGFTYSILF 300
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 30/49 (61%)
Query: 37 DESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
D + N F N++++ L + G ++KLFD++ + + P+ +TYNT+
Sbjct: 181 DGAPAPNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTM 229
Score = 34.7 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 9 ISSYSSYIKFLG--KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
I +Y+ I G K+G KA E+ ++ + I N +++ + G E + +
Sbjct: 326 IGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSI 385
Query: 67 FDKIKQSGLTPDAVTYNTV 85
F ++K + PD +TYN +
Sbjct: 386 FQQMKSRLIRPDHITYNAL 404
>gi|297825903|ref|XP_002880834.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297326673|gb|EFH57093.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 797
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 45/79 (56%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ I G + AL++ + + ++ N+++S L RNG E+ L++++
Sbjct: 422 VINYTTLIDGYCLKGKVVDALDLIDEMIGNGTSPDLITYNVLVSGLARNGHEEAVLEIYE 481
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++K GL P+AVT N + +
Sbjct: 482 RMKAEGLKPNAVTDNVIIE 500
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVF---IC-NLILSCLVRNGKFESSLKLFD 68
SS ++ K L+ALE + D +N+F +C N+ L + G+ E +++L
Sbjct: 356 SSILQCYCKMDMCLEALEKFKEFRD----MNIFLDRVCYNVAFDALSKLGRVEEAIELLQ 411
Query: 69 KIKQSGLTPDAVTYNTV 85
++K G+ PD + Y T+
Sbjct: 412 EMKDKGIVPDVINYTTL 428
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 35/62 (56%)
Query: 24 NSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYN 83
N++ A ++++++ + ++F +++ R + + + LF+ +KQ G+ PD VTY
Sbjct: 605 NAIDAQQLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYT 664
Query: 84 TV 85
+
Sbjct: 665 VL 666
>gi|242057909|ref|XP_002458100.1| hypothetical protein SORBIDRAFT_03g026930 [Sorghum bicolor]
gi|241930075|gb|EES03220.1| hypothetical protein SORBIDRAFT_03g026930 [Sorghum bicolor]
Length = 666
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESD-----KVNVFICNLILSCLVRNGKFESSL 64
+SY+ + LG+NG AL++++ + E D VN+ N+++ R +F+ ++
Sbjct: 319 TSYNMVLDALGRNGRLEDALKLFDRMCVEHDPPRTIAVNLGSFNVMVDAYCRAERFQDAI 378
Query: 65 KLFDKIKQSGLTPDAVTYNTVYQSDHITWI 94
++F K+ + PDA++YN + I W+
Sbjct: 379 EVFGKMAEKRCAPDALSYNNL-----IDWL 403
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 44 VFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
VF CN +L+ L+R ++ L L + Q+ + P TYN + Q+
Sbjct: 135 VFTCNAVLAALLRQARYADLLSLHRFVTQASVAPTVATYNLLLQA 179
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ I +LGKN +A +Y + + K + + L++ + + E ++ F+K+
Sbjct: 395 SYNNLIDWLGKNELVGEAEGLYKEMGERGVKPDEYTYVLLIESCFKVDRVEDAVSYFNKM 454
Query: 71 KQSGLTPDAVTYNTV 85
+GL P+A +N V
Sbjct: 455 LDAGLRPNANAFNKV 469
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFIC--NLILSCLVRNGKFESSLKLFDK 69
Y + +K G +A++ Y + E KV N++L L RNG+ E +LKLFD+
Sbjct: 284 YGNLMKGYFLKGMEKEAMDCYAEVLGEGSKVRFGATSYNMVLDALGRNGRLEDALKLFDR 343
Query: 70 IKQSGLTPDAVTYN 83
+ P + N
Sbjct: 344 MCVEHDPPRTIAVN 357
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 46/80 (57%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++++Y+ I ++G+ A + + + ++ + +V N+++ L G+ ++KL
Sbjct: 403 NVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLL 462
Query: 68 DKIKQSGLTPDAVTYNTVYQ 87
D++ + GL P+ +TYNT+ Q
Sbjct: 463 DEMSEVGLEPNHLTYNTIIQ 482
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 37/67 (55%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
KN N+ A+ ++ + + +V N ++S L GK E +KL ++++ GL+P+ +
Sbjct: 276 KNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEI 335
Query: 81 TYNTVYQ 87
T+ V +
Sbjct: 336 TFGCVLK 342
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 37/74 (50%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I + G A+ + ++ + NV N +++ R+G + S+ L D++K
Sbjct: 372 YTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK 431
Query: 72 QSGLTPDAVTYNTV 85
+ G+ D VTYN +
Sbjct: 432 EKGIEADVVTYNVL 445
>gi|18491213|gb|AAL69509.1| unknown protein [Arabidopsis thaliana]
Length = 320
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTS-ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M G T + SYS Y+ + K+G KA+++Y + K++V N ++ + +
Sbjct: 87 MDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQG 146
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E +++F ++++ G P+ T+NT+
Sbjct: 147 VEFGIRVFREMRERGCEPNVATHNTI 172
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 42/81 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y++ I+ +G + + ++ + + + NV N I+ L +G+ + +
Sbjct: 128 KLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYR 187
Query: 66 LFDKIKQSGLTPDAVTYNTVY 86
+ D++ + G PD++TY ++
Sbjct: 188 MLDEMPKRGCQPDSITYMCLF 208
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 46/80 (57%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++++Y+ I ++G+ A + + + ++ + +V N+++ L G+ ++KL
Sbjct: 403 NVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLL 462
Query: 68 DKIKQSGLTPDAVTYNTVYQ 87
D++ + GL P+ +TYNT+ Q
Sbjct: 463 DEMSEVGLEPNHLTYNTIIQ 482
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 37/67 (55%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
KN N+ A+ ++ + + +V N ++S L GK E +KL ++++ GL+P+ +
Sbjct: 276 KNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEI 335
Query: 81 TYNTVYQ 87
T+ V +
Sbjct: 336 TFGCVLK 342
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 37/74 (50%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I + G A+ + ++ + NV N +++ R+G + S+ L D++K
Sbjct: 372 YNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK 431
Query: 72 QSGLTPDAVTYNTV 85
+ G+ D VTYN +
Sbjct: 432 EKGIEADVVTYNVL 445
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 39/73 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
++ +K K G A + + +T+ + + +V I N+++ R GK E ++ + + +
Sbjct: 336 TFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAM 395
Query: 71 KQSGLTPDAVTYN 83
+ G++P+ TYN
Sbjct: 396 AKKGISPNVTTYN 408
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 22 NGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVT 81
N + AL +Y + D K+N + C+++L+ L + G+ E + ++ + GL P+ V
Sbjct: 705 NDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVL 764
Query: 82 YNTV 85
YNT+
Sbjct: 765 YNTM 768
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
K LE++N + + VFI N+++ L + + + + +LFD++ L P +TYNT+
Sbjct: 570 KGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTL 628
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ +G ++ SY + I L K L+A + + D NV I N+++ GK
Sbjct: 858 MEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGK 917
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E + + +++ + G+ + VTYNT+
Sbjct: 918 IEDAFRFSEEMFKKGIELNLVTYNTL 943
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 41/76 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y++ I L NG +A ++ I+ + K +VF N ++S G + + L+
Sbjct: 936 NLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALY 995
Query: 68 DKIKQSGLTPDAVTYN 83
+++K SG+ P TY+
Sbjct: 996 EEMKTSGIKPTLKTYH 1011
>gi|224061569|ref|XP_002300545.1| predicted protein [Populus trichocarpa]
gi|222847803|gb|EEE85350.1| predicted protein [Populus trichocarpa]
Length = 567
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 44/84 (52%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
GK ++ SY+ + L K G + +A++ + + + NV CN+IL L G++E +
Sbjct: 233 GKPNLVSYNVLLTGLCKEGRTEEAIQFFRDLPSKGFNPNVVSCNIILRSLCCEGRWEEAN 292
Query: 65 KLFDKIKQSGLTPDAVTYNTVYQS 88
+L ++ +P VTYN + S
Sbjct: 293 ELVAEMDSEERSPSLVTYNILIGS 316
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 41/79 (51%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
+SY+ + L K GN A+++ + + N N ++ L ++G SL+L DK
Sbjct: 133 ASYTFLVNNLCKRGNIGYAMQLVEKMEENGCPTNTVTYNSLVRGLCKHGNLNQSLQLLDK 192
Query: 70 IKQSGLTPDAVTYNTVYQS 88
+ + GL P+ T++ + ++
Sbjct: 193 LMRKGLVPNEFTHSFLLEA 211
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+++G T+ +Y+S ++ L K+GN ++L++ + + + N F + +L +
Sbjct: 158 MEENGCPTNTVTYNSLVRGLCKHGNLNQSLQLLDKLMRKGLVPNEFTHSFLLEAAYKERG 217
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++KL D I G P+ V+YN +
Sbjct: 218 VDEAMKLLDGIIAKGGKPNLVSYNVL 243
>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
K G + K LE+ N++ N I N I+S R G+ + S K+ +K+++ GL PD V
Sbjct: 194 KAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIV 253
Query: 81 TYNT 84
T+N+
Sbjct: 254 TFNS 257
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 45/79 (56%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
S+ SY+ +++ L ++G ++A + +TD+ +++ N+++ L + G + +
Sbjct: 324 ASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTI 383
Query: 67 FDKIKQSGLTPDAVTYNTV 85
+K++G+ PDAVTY +
Sbjct: 384 VGLMKRNGVCPDAVTYGCL 402
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 16/79 (20%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
ISS +K + K G K+LE YNS LIL ++N FE L D
Sbjct: 575 ISSAFRVLKDMEKKGCH-KSLETYNS--------------LILGLGIKNQIFEIH-GLMD 618
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++K+ G++P+ TYNT Q
Sbjct: 619 EMKEKGISPNICTYNTAIQ 637
>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
Length = 795
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGL 75
++ GK G+ +A +++SI D NVF +I++ +NG L+L ++ Q+G+
Sbjct: 159 VEMYGKCGDVEQAGNVFDSIQDP----NVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGV 214
Query: 76 TPDAVTYNTV 85
PD T+ TV
Sbjct: 215 KPDGYTFTTV 224
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 29/42 (69%)
Query: 44 VFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
VF N+++ C+ + G E++ LF+++K GL PD VTYN++
Sbjct: 262 VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSM 303
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I GK G + + + D + +V N +++C + GK L+ + ++
Sbjct: 299 TYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM 358
Query: 71 KQSGLTPDAVTYNTV 85
K +GL P+ V+Y+T+
Sbjct: 359 KGNGLKPNVVSYSTL 373
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESD-KVNVFICNLILSCLVRNGKFESSL 64
+ ++ ++ I L KN KA++ +N I+++ + N I ++ L ++ + E++
Sbjct: 574 EVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAAT 633
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
LF+++ Q GL PD Y ++
Sbjct: 634 TLFEQMVQKGLVPDRTAYTSL 654
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 43/77 (55%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K S ++S I+ + G KA+E ++ + D K ++F NLIL LVR F +L
Sbjct: 125 KISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALA 184
Query: 66 LFDKIKQSGLTPDAVTY 82
+++++ + L PD VTY
Sbjct: 185 VYNQMLKCNLNPDVVTY 201
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 40/77 (51%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y I L K + AL +++ +TD N I +++LS L + K + +LF
Sbjct: 198 VVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFS 257
Query: 69 KIKQSGLTPDAVTYNTV 85
K++ SG D +TYN +
Sbjct: 258 KMRASGCNRDLITYNVL 274
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I+S ++ L ++G LKA ++ + D ++ N++++ + G + KLF
Sbjct: 491 IASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFK 550
Query: 69 KIKQSGLTPDAVTYNTV 85
+++ G PD+VTY T+
Sbjct: 551 EMQLKGHMPDSVTYGTL 567
Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 41/80 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +++ + FL + L AL +YN + + +V +++ L + K + +L
Sbjct: 160 KPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALV 219
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LFD++ G+ P+ + Y+ V
Sbjct: 220 LFDEMTDRGILPNQIIYSIV 239
>gi|357119238|ref|XP_003561352.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20740-like [Brachypodium distachyon]
Length = 732
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 44/75 (58%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+++ ++ LG G + + LE+ + DE + +VF+ ++ ++R G E +++++++
Sbjct: 272 TFAIIVRALGHAGMTERILEMIGRMRDEVCRPDVFVYTALVKTMMRRGHIEGCIRVWEEM 331
Query: 71 KQSGLTPDAVTYNTV 85
G+ PDA+ Y T+
Sbjct: 332 GTDGVEPDAMAYATM 346
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 44 VFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
V CN +L L G E +LKLFD++ + G+ P VT+ + ++
Sbjct: 235 VHACNRVLGALAAAGHVEDALKLFDEMSEGGVRPMPVTFAIIVRA 279
>gi|298712094|emb|CBJ26674.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 838
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 41/74 (55%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + G+ GN AL + + + + N F N + R GK++ +L+L +++
Sbjct: 144 TYTAAVTACGRGGNLEAALSLLDGMRGKGVSPNCFTYNSAIHACARKGKWKLALELIERM 203
Query: 71 KQSGLTPDAVTYNT 84
K G+TP+ TY++
Sbjct: 204 KADGVTPNLTTYSS 217
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G T ++++YSS K GN + AL+I + +V + N ++ G+
Sbjct: 203 MKADGVTPNLTTYSSAADACAKGGNCVAALKILEEVRSLDFEVGEILYNSVMEACAAVGQ 262
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNT 84
+ SL L + +++ G+ P TY T
Sbjct: 263 TKLSLSLLETMRKDGVKPSPATYTT 287
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY+S I G G +A + + +VF N ++ V G + ++L+L +++
Sbjct: 670 SYNSAIAACGPGGEVAEARALLECMRQRGTPPDVFSFNGVMQANVWGGDWAAALELLEEM 729
Query: 71 KQSGLTPDAVTYN 83
K GL PD ++N
Sbjct: 730 KSEGLMPDVTSFN 742
Score = 34.7 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESD-KVNVFICNLILSCLVRNGKFESSLKLFDK 69
SY++ K G+ AL + + ++ + N F ++ R G E++L L D
Sbjct: 108 SYTAAASACAKTGDWKGALRLLGQMREKDGLEPNEFTYTAAVTACGRGGNLEAALSLLDG 167
Query: 70 IKQSGLTPDAVTYNTVYQS 88
++ G++P+ TYN+ +
Sbjct: 168 MRGKGVSPNCFTYNSAIHA 186
>gi|255540881|ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550620|gb|EEF52107.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 876
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 44/77 (57%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS I LGK G+ A +++ + ++ N+ N++++ + ++S+LKL+ +
Sbjct: 487 TYSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDM 546
Query: 71 KQSGLTPDAVTYNTVYQ 87
+ +G PD VTY+ V +
Sbjct: 547 QSAGFQPDKVTYSIVME 563
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 33/71 (46%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y + GK GN KA + Y ++ + + NV CN +LS +R K + L +
Sbjct: 593 YGLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVPTCNSLLSAFLRVHKLADAYNLLQSML 652
Query: 72 QSGLTPDAVTY 82
+ GL P TY
Sbjct: 653 ELGLNPSLQTY 663
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 38/73 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y + I K G ALE+Y + + F ++I++CL + G ++ KLF ++
Sbjct: 452 TYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFCEM 511
Query: 71 KQSGLTPDAVTYN 83
+ G P+ VTYN
Sbjct: 512 VEQGCVPNLVTYN 524
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 44/77 (57%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y++ + L K+G A+E+ N ++ + + N ++ L + GK + + KL D
Sbjct: 259 IVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLD 318
Query: 69 KIKQSGLTPDAVTYNTV 85
+++ GL PD +TY+++
Sbjct: 319 EMRAKGLKPDIITYSSL 335
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M +HG T S SY+ + K +A+E +T ++ N +L+ L ++GK
Sbjct: 215 MPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGK 274
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+++++L +++ G +P +TYNTV
Sbjct: 275 VDAAVELLNQLSSKGCSPVLITYNTV 300
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 43/75 (57%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I L K G + +A ++ + + + K ++ + ++ L R GK + ++K F +
Sbjct: 296 TYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDL 355
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ P+A+TYN +
Sbjct: 356 EVLGVKPNAITYNAI 370
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 37/78 (47%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +++ I FL + G +A+++ + N N +L + K E +++
Sbjct: 188 SVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYL 247
Query: 68 DKIKQSGLTPDAVTYNTV 85
K+ G PD VTYNT+
Sbjct: 248 GKMTSRGCYPDIVTYNTL 265
Score = 34.3 bits (77), Expect = 9.6, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 31/67 (46%)
Query: 19 LGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPD 78
L +NG + S+ D ++ C ++ + GK + ++ + I+ SG PD
Sbjct: 94 LVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPD 153
Query: 79 AVTYNTV 85
+TYN +
Sbjct: 154 VITYNVL 160
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 41/76 (53%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
++ I K G L+A+++ + +NV + ++ + G +S+L+LFDK+
Sbjct: 297 FTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMN 356
Query: 72 QSGLTPDAVTYNTVYQ 87
++G+ P+ VTY + +
Sbjct: 357 ENGICPNNVTYAVIIE 372
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 44/85 (51%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+++ K ++ +YS + K G++ A +Y+ + E+ + F CN+I++ L + G+
Sbjct: 495 LEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRT 554
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
S K+ Q G P +TYN +
Sbjct: 555 SESQDRLKKLVQEGFIPTCMTYNCI 579
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 34/109 (31%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSI------------------------TDESDKV---- 42
+Y+ I++ KNGN KA EIYN + +E+ K+
Sbjct: 366 TYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEA 425
Query: 43 ------NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
NVF N +LS L + GK + +++K+ + G+ P V+YN +
Sbjct: 426 VACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNM 474
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
YSS I K N AL ++ + +E ++ I ++S L++ GK + +L+ ++
Sbjct: 681 YSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEML 740
Query: 72 QSGLTPDAVTYNTV 85
G+ PD +TY+ +
Sbjct: 741 AKGIMPDLITYSVL 754
>gi|326514834|dbj|BAJ99778.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 609
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G ++ +Y + + K AL++Y+ + E +VN FI +L+++ L +NGK
Sbjct: 472 MKERGIDPNVVTYGTVMDGFFKCQEQESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGK 531
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E + LF + + G+ D V Y T+
Sbjct: 532 MEEAEALFRDMNKRGMLLDHVNYTTL 557
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I L + GN A ++ + D+S NV + I++ L + G + K+
Sbjct: 413 TYTVLIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKM 472
Query: 71 KQSGLTPDAVTYNTV 85
K+ G+ P+ VTY TV
Sbjct: 473 KERGIDPNVVTYGTV 487
>gi|168004577|ref|XP_001754988.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694092|gb|EDQ80442.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 437
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
++ I K GN + ++ + D +V N+I++ RNG F+ + +LF+ +++
Sbjct: 115 NTLIDMYAKCGNIRQGHTMFTEMKDR----DVVTWNIIIAGAARNGYFDEAFELFEAMRE 170
Query: 73 SGLTPDAVTYNTV 85
+GL PD VTY V
Sbjct: 171 AGLKPDKVTYVCV 183
>gi|307105412|gb|EFN53661.1| hypothetical protein CHLNCDRAFT_58444 [Chlorella variabilis]
Length = 1131
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 48/88 (54%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+Q+ + S+ +YSS I K G AL+++ + E NV N +++ + ++
Sbjct: 458 VQKGCERSVITYSSLISACEKAGEWKLALQLFEEMRGEGCVPNVISYNSLITACAQGAQW 517
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
E + ++F+++++ G PD V+Y + Q+
Sbjct: 518 EKAAEVFEQMQRQGCRPDVVSYTALIQA 545
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 45/76 (59%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y++ I K G+ K L ++ + + + +V + ++S + G+++ +L+LF++
Sbjct: 432 TTYNALISAHSKGGDLPKVLAVFKEMVQKGCERSVITYSSLISACEKAGEWKLALQLFEE 491
Query: 70 IKQSGLTPDAVTYNTV 85
++ G P+ ++YN++
Sbjct: 492 MRGEGCVPNVISYNSL 507
>gi|242070261|ref|XP_002450407.1| hypothetical protein SORBIDRAFT_05g004830 [Sorghum bicolor]
gi|241936250|gb|EES09395.1| hypothetical protein SORBIDRAFT_05g004830 [Sorghum bicolor]
Length = 462
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I ++G +++AL++++ + + + N ++ CL R+G E + ++F +
Sbjct: 84 TYNSLITGADRSGLTVRALDLFDEMLRSGVAPDSWSYNALMHCLFRSGHPEHAYRVFADM 143
Query: 71 KQSGLTPDAVTYNT----VYQSDHIT 92
G+ P A TYNT ++++ H T
Sbjct: 144 ADKGVAPCATTYNTLLDGLFKAGHAT 169
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 33/77 (42%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y++ I L K+G A + + N ++ C R G+FE L+ F
Sbjct: 187 IVTYNTMINGLCKSGKVGYARMVLKELGRTEHAPNAVTYTTVMKCCFRYGRFEQGLETFL 246
Query: 69 KIKQSGLTPDAVTYNTV 85
+ + G DA Y TV
Sbjct: 247 SLLEGGYISDAFPYTTV 263
>gi|8778269|gb|AAF79278.1|AC068602_1 F14D16.2 [Arabidopsis thaliana]
Length = 977
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS I LGK G+ A +++ + D+ N+ N+++ + ++++LKL+ +
Sbjct: 588 TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM 647
Query: 71 KQSGLTPDAVTYNTVYQ 87
+ +G PD VTY+ V +
Sbjct: 648 QNAGFEPDKVTYSIVME 664
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G K +Y + I K G A+++Y + + F ++I++CL + G
Sbjct: 542 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 601
Query: 60 FESSLKLFDKIKQSGLTPDAVTYN 83
++ KLF ++ G TP+ VTYN
Sbjct: 602 LPAAHKLFCEMVDQGCTPNLVTYN 625
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 32/71 (45%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y + GK GN KA + Y ++ + NV CN +LS +R K + +L +
Sbjct: 694 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 753
Query: 72 QSGLTPDAVTY 82
GL P TY
Sbjct: 754 ALGLRPSLQTY 764
>gi|224111048|ref|XP_002315730.1| predicted protein [Populus trichocarpa]
gi|222864770|gb|EEF01901.1| predicted protein [Populus trichocarpa]
Length = 760
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDES-----DKVNVFICNLILSCLVRNGKFES 62
S+ SY++ K + + G + A +N + DE NV I LS +R +
Sbjct: 218 SVKSYNALFKVIVRKGRYMMAKRFFNKMLDEGIGPTRHTYNVLIWGFFLSMRLR-----T 272
Query: 63 SLKLFDKIKQSGLTPDAVTYNTV 85
+++ ++ +K G++PD VTYNT+
Sbjct: 273 AVRFYEDMKVRGISPDVVTYNTM 295
>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
Length = 642
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+++G + I+S++ + + G +A+E++ +I K + N +L C G
Sbjct: 540 MEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGM 599
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
FE + ++ ++K G DA+TY+++
Sbjct: 600 FEEAARMMREMKDKGFEYDAITYSSI 625
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 35/119 (29%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNG--- 58
+ G S Y+ IK GK G +A++++N + ++ +V+ N ++S +V+ G
Sbjct: 472 ENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMIN 531
Query: 59 -------KFES-------------------------SLKLFDKIKQSGLTPDAVTYNTV 85
K E ++++F+ IK SG+ PD VTYNT+
Sbjct: 532 EANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTL 590
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKV-NVFICNLILSCLVRNGKFESSL 64
K + S+Y+S I L + G K E+Y + +E D + + ++S + G+ +S++
Sbjct: 194 KPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAI 253
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
+LFD++K + + P Y T+
Sbjct: 254 RLFDEMKDNCMQPTEKIYTTL 274
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 41/81 (50%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+ IK LGK G +A Y + + +V N +++ L + G+ E +F
Sbjct: 302 TVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVF 361
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
++ TP V+YNTV ++
Sbjct: 362 SEMGMWRCTPTVVSYNTVIKA 382
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS+ I K G + A+ +++ + D + I +L + GK E +L LF+++
Sbjct: 235 TYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEM 294
Query: 71 KQSGLTPDAVTY 82
K++G +P TY
Sbjct: 295 KRAGCSPTVYTY 306
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 37/76 (48%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y S I LGK A E++ + + V+ + +++ + GK ++ LF++
Sbjct: 445 AAYCSLINALGKAKRYEAADELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNE 504
Query: 70 IKQSGLTPDAVTYNTV 85
+K G PD YN +
Sbjct: 505 MKNQGSGPDVYAYNAL 520
>gi|255585157|ref|XP_002533283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526886|gb|EEF29094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 405
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
KAL I++ I D K ++ N++L L R G+ + L F +K++G+ PD + YNT+
Sbjct: 239 KALLIFDQIKDLEYKPDLITYNMVLHILGRAGRVDEMLYEFSSMKEAGIVPDFICYNTL 297
Score = 34.7 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFIC-NLILSCLVRNGKFESSL 64
K + +Y+ + LG+ G + L ++S+ E+ V FIC N +L+ L + G+ + L
Sbjct: 253 KPDLITYNMVLHILGRAGRVDEMLYEFSSMK-EAGIVPDFICYNTLLNQLQKAGRLDLCL 311
Query: 65 KLFDKIKQSGLTPDAVTYNTVYQS 88
++ +SG+ D +TY + QS
Sbjct: 312 VYIREMGESGIEADLLTYTALIQS 335
>gi|168023641|ref|XP_001764346.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684498|gb|EDQ70900.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 978
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G K YSS + GN KALE+Y I + V N +++ L +
Sbjct: 533 MKKEGLKPGAVVYSSLMGVCSNLGNWEKALEVYQDIRSSGLQPTVSTFNALMTALCEANQ 592
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
F +L + +K SG+ P+ ++Y+ + ++
Sbjct: 593 FTRALSILQDVKNSGIMPNQISYSILLRA 621
>gi|15233259|ref|NP_188222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274469|sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 642
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+++G + I+S++ + + G +A+E++ +I K + N +L C G
Sbjct: 540 MEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGM 599
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
FE + ++ ++K G DA+TY+++
Sbjct: 600 FEEAARMMREMKDKGFEYDAITYSSI 625
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 35/119 (29%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNG--- 58
+ G S Y+ IK GK G +A++++N + ++ +V+ N ++S +V+ G
Sbjct: 472 ENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMIN 531
Query: 59 -------KFES-------------------------SLKLFDKIKQSGLTPDAVTYNTV 85
K E ++++F+ IK SG+ PD VTYNT+
Sbjct: 532 EANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTL 590
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKV-NVFICNLILSCLVRNGKFESSL 64
K + S+Y+S I L + G K E+Y + +E D + + ++S + G+ +S++
Sbjct: 194 KPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAI 253
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
+LFD++K + + P Y T+
Sbjct: 254 RLFDEMKDNCMQPTEKIYTTL 274
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 41/81 (50%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+ IK LGK G +A Y + + +V N +++ L + G+ E +F
Sbjct: 302 TVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVF 361
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
++ TP V+YNTV ++
Sbjct: 362 SEMGMWRCTPTVVSYNTVIKA 382
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS+ I K G + A+ +++ + D + I +L + GK E +L LF+++
Sbjct: 235 TYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEM 294
Query: 71 KQSGLTPDAVTY 82
K++G +P TY
Sbjct: 295 KRAGCSPTVYTY 306
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 37/76 (48%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y S I LGK A E++ + + V+ + +++ + GK ++ LF++
Sbjct: 445 AAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNE 504
Query: 70 IKQSGLTPDAVTYNTV 85
+K G PD YN +
Sbjct: 505 MKNQGSGPDVYAYNAL 520
>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 605
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
++Y++ I + G KA N + +S K ++F CN+++ L G + +LKLF
Sbjct: 395 TTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKT 454
Query: 70 IKQSGLTPDAVTYNTV 85
G DAVT+NT+
Sbjct: 455 WISKGKAIDAVTFNTI 470
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 25 SLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNT 84
SLK E+ + + + K N N+++ V+ GK +++ K+++SG +PD VT+NT
Sbjct: 204 SLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNT 263
Query: 85 V 85
+
Sbjct: 264 L 264
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 33/62 (53%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVY 86
KAL+++ + + ++ N I+S L G+FE + L ++++ L PD T+N +
Sbjct: 447 KALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAIL 506
Query: 87 QS 88
+
Sbjct: 507 SA 508
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y++ + L KNGN A+EI+ + + NV N +LS L +G +L +
Sbjct: 290 IVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMIS 349
Query: 69 KIKQSGLTPDAVTYNTV 85
++ G+ PD +TYN++
Sbjct: 350 QMLSKGIDPDVITYNSL 366
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y+ ++ L G + + + I + NV ++++S L R+GK E S+
Sbjct: 182 KPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVN 241
Query: 66 LFDKIKQSGLTPDAVTYN 83
L +K+ GLTPDA Y+
Sbjct: 242 LVKVMKEKGLTPDAYCYD 259
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 42/78 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++SSY++ + L +G+ +AL + + + + +V N ++SCL R+G + ++ L
Sbjct: 324 NVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLL 383
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ P+ V+Y TV
Sbjct: 384 ADMLSGRFQPNIVSYKTV 401
Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 35 ITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYN 83
I ++ K +VF N ++S + + ES+ + D++K+ G +PD VT+N
Sbjct: 35 ILEKHGKPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHN 83
Score = 37.7 bits (86), Expect = 0.98, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 37/78 (47%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ + L K G +A E ++ K +V N++L L+ GK++ K +I
Sbjct: 152 TYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEI 211
Query: 71 KQSGLTPDAVTYNTVYQS 88
G P+ VTY+ + S
Sbjct: 212 FSRGCEPNVVTYSILISS 229
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 18 FLGKNGNSLKALEIYNSI-TDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLT 76
F GK L AL+++ + D + K + +++ + G + +LKL D++ GL
Sbjct: 89 FCGKGKIDL-ALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLE 147
Query: 77 PDAVTYNTV 85
PD TYN +
Sbjct: 148 PDTFTYNVI 156
Score = 34.7 bits (78), Expect = 7.1, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 40/78 (51%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +YS I L ++G +++ + + ++ + + + +++ R GK + +++
Sbjct: 219 NVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFL 278
Query: 68 DKIKQSGLTPDAVTYNTV 85
D + G PD V YNT+
Sbjct: 279 DCMICDGFLPDIVNYNTI 296
>gi|302768873|ref|XP_002967856.1| hypothetical protein SELMODRAFT_169254 [Selaginella moellendorffii]
gi|300164594|gb|EFJ31203.1| hypothetical protein SELMODRAFT_169254 [Selaginella moellendorffii]
Length = 731
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 47/77 (61%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
+SS + GN KA+ +Y +I + +V N +++ L R +F+++L+ +++K
Sbjct: 330 FSSLMGVCSNTGNWEKAIFLYENIQAVGIRPSVSTLNALMTALCRGKQFQNALQSLEELK 389
Query: 72 QSGLTPDAVTYNTVYQS 88
++G++P+ +TY+ + ++
Sbjct: 390 EAGVSPNQLTYSILLEA 406
>gi|297849558|ref|XP_002892660.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338502|gb|EFH68919.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 367
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 42/63 (66%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ I LG++GN+ ++L +++ + + +V++ ++ CL ++G F+ +L+L D++
Sbjct: 285 SYTAVIDSLGRSGNTKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQGALQLSDEL 344
Query: 71 KQS 73
K +
Sbjct: 345 KNT 347
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESD-KVNVFICNLILSCLVRNGKFESSL 64
K + +Y+S + LG+ G + L + +++ ++ D VN+ N +L+ + + +F+ L
Sbjct: 209 KPDVITYNSVLDILGRAGLVNEMLGVLSTMKEDCDVSVNIITYNTVLNGMRKACRFDMCL 268
Query: 65 KLFDKIKQSGLTPDAVTYNTVYQS 88
+++++ G+ PD ++Y V S
Sbjct: 269 VIYNEMVLRGIEPDLLSYTAVIDS 292
>gi|22128708|gb|AAM92820.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31432840|gb|AAP54427.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
Length = 517
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 43/77 (55%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ SY++ I K G+S KA Y+ + D NV + I++ L + + ++++ +
Sbjct: 341 VVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPNVVTYSSIIAALCKAQAMDKAMEVLN 400
Query: 69 KIKQSGLTPDAVTYNTV 85
+ ++G+ PD +TYN++
Sbjct: 401 TMVKNGVMPDCMTYNSI 417
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 39/77 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S + +G +A+ + + + NV +++ L +NG+ + K+FD +
Sbjct: 413 TYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYRSLMNYLCKNGRCTEARKIFDSM 472
Query: 71 KQSGLTPDAVTYNTVYQ 87
+ GL PD TY T+ Q
Sbjct: 473 TKRGLEPDIATYRTLLQ 489
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 39/78 (50%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +YSS I L K KA+E+ N++ + N IL +G+ + ++
Sbjct: 375 NVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTL 434
Query: 68 DKIKQSGLTPDAVTYNTV 85
K++ G+ P+ VTY ++
Sbjct: 435 KKMRSDGVEPNVVTYRSL 452
>gi|413937640|gb|AFW72191.1| hypothetical protein ZEAMMB73_762171 [Zea mays]
Length = 503
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ ++ K N + E+ +S+ + NV +I++ L + +FE +L + D
Sbjct: 257 VITYTAVLEAYCKQRNFRRVYEVLDSMGSQGCHPNVITYTMIMTSLTKCERFEEALSVSD 316
Query: 69 KIKQSGLTPDAVTYNTV 85
++K SG PD + YN +
Sbjct: 317 RMKSSGCKPDTLFYNAL 333
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 47/77 (61%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+S + + ++G++ AL++ + + + K +VF + I+ L R+G ++++ LF
Sbjct: 193 VVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFK 252
Query: 69 KIKQSGLTPDAVTYNTV 85
+++ G+ VTYN++
Sbjct: 253 EMETKGIKSSVVTYNSL 269
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G K+S+ +Y+S ++ L K G + + NV N++L V+ GK
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + +L+ ++ G++P+ +TYNT+
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTL 339
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Query: 1 MQQHGK-TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M HG + +Y + L NG KALEI+ + + + + I+ + + GK
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 488
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E + LF + G+ P+ +TY +
Sbjct: 489 VEDAWNLFCSLPCKGVKPNVMTYTVM 514
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 41/80 (51%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I Y++ I+ + K G A ++ S+ + K NV +++S L + G + L
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532
Query: 69 KIKQSGLTPDAVTYNTVYQS 88
K+++ G P+ TYNT+ ++
Sbjct: 533 KMEEDGNAPNDCTYNTLIRA 552
>gi|297727717|ref|NP_001176222.1| Os10g0495400 [Oryza sativa Japonica Group]
gi|255679525|dbj|BAH94950.1| Os10g0495400, partial [Oryza sativa Japonica Group]
Length = 438
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 43/77 (55%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ SY++ I K G+S KA Y+ + D NV + I++ L + + ++++ +
Sbjct: 204 VVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPNVVTYSSIIAALCKAQAMDKAMEVLN 263
Query: 69 KIKQSGLTPDAVTYNTV 85
+ ++G+ PD +TYN++
Sbjct: 264 TMVKNGVMPDCMTYNSI 280
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 39/77 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S + +G +A+ + + + NV +++ L +NG+ + K+FD +
Sbjct: 276 TYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYRSLMNYLCKNGRCTEARKIFDSM 335
Query: 71 KQSGLTPDAVTYNTVYQ 87
+ GL PD TY T+ Q
Sbjct: 336 TKRGLEPDIATYRTLLQ 352
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 35/113 (30%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDE----------------SDKVNVFICNLIL 51
++ +Y S + +L KNG +A +I++S+T + K + + +L
Sbjct: 308 NVVTYRSLMNYLCKNGRCTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALL 367
Query: 52 SCLVRNG-------------------KFESSLKLFDKIKQSGLTPDAVTYNTV 85
+VRNG K + ++ +F K++Q GL P+ V Y TV
Sbjct: 368 DLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTV 420
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 39/78 (50%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +YSS I L K KA+E+ N++ + N IL +G+ + ++
Sbjct: 238 NVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTL 297
Query: 68 DKIKQSGLTPDAVTYNTV 85
K++ G+ P+ VTY ++
Sbjct: 298 KKMRSDGVEPNVVTYRSL 315
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K I + + I L K G A E++ +++E + NV +++ R G+ + +
Sbjct: 457 KLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANV 516
Query: 66 LFDKIKQSGLTPDAVTYNTVYQ 87
L K++ +G TPD +TYNT+ +
Sbjct: 517 LIQKMEANGCTPDIITYNTLMR 538
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ HG S +Y ++ L KN +A++++ + + K+ + N ++ L + GK
Sbjct: 416 MKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGK 475
Query: 60 FESSLKLFDKIKQSGLTPDAVTY 82
E++ +LF+K+ G P+ VTY
Sbjct: 476 LETAWELFEKLSNEGHEPNVVTY 498
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
SI SY+S I G ++ + + + D+ + ++ N+++ L + GK + KL
Sbjct: 249 SIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLL 308
Query: 68 DKIKQSGLTPDAVTYNTVYQ 87
+ +SG+ PD VTYN++ +
Sbjct: 309 GVMIESGIVPDLVTYNSLIE 328
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 41/80 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ +Y+ + L K G +A +++ + + ++ N ++ GK+E S +
Sbjct: 212 KPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKR 271
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L D++ GL PD VT+N +
Sbjct: 272 LLDEMLDQGLQPDMVTFNVL 291
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 39/85 (45%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
M+ S+SS++ + L K + + +YN + + N++L+CL +
Sbjct: 61 MRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRL 120
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
F I + G +P+ VTYNT+
Sbjct: 121 REGFAAFAGILRRGYSPNIVTYNTL 145
>gi|297839881|ref|XP_002887822.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333663|gb|EFH64081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 407
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 42/75 (56%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SYS Y+ + K+G KA+++Y + K++V N ++ + + E +++F ++
Sbjct: 186 SYSIYMDIMCKSGKPWKAVKLYKEMKSRRIKLDVVAYNTVIRAIGASQGVEFGIRVFREM 245
Query: 71 KQSGLTPDAVTYNTV 85
++ G P+ T+NT+
Sbjct: 246 RERGCEPNVATHNTI 260
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 42/81 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y++ I+ +G + + ++ + + + NV N I+ L +G+ + +
Sbjct: 216 KLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYR 275
Query: 66 LFDKIKQSGLTPDAVTYNTVY 86
+ D++ + G PD+++Y ++
Sbjct: 276 MLDEMPKKGCQPDSISYMCLF 296
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ SY++ I L + G KA +++ + D+ N N +L +GK + ++ +F
Sbjct: 206 VVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFR 265
Query: 69 KIKQSGLTPDAVTYNTV 85
K+ + G+ PD VTYNT+
Sbjct: 266 KMCRDGVEPDVVTYNTL 282
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 50/112 (44%), Gaps = 35/112 (31%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNV------------------------ 44
+ +Y++ + +L KNG S++A ++++S+ + K +
Sbjct: 276 VVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLD 335
Query: 45 -----------FICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
+I N+++ ++G + ++ F K++Q GL P+ VTY TV
Sbjct: 336 VMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTV 387
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 34/66 (51%)
Query: 20 GKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDA 79
K+G +A+ ++ + + N+ ++ L R GK + ++ FD++ GLTP+
Sbjct: 357 AKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNG 416
Query: 80 VTYNTV 85
V + T+
Sbjct: 417 VVFRTL 422
>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSL-KALEIYNSITDESDKVNVFICNLILSCLVRNG 58
M++ G + ++ +Y+ + GK G S K L + + + + K + F C+ +LS R G
Sbjct: 236 MKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREG 295
Query: 59 KFESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
+ + F ++K G P VTYN + Q
Sbjct: 296 LLREAKEFFAELKSCGYEPGTVTYNALLQ 324
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 39/71 (54%)
Query: 15 YIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSG 74
+++ LG+ A ++ + I + ++V IL R GK+E ++ LF+++K+ G
Sbjct: 181 FVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMG 240
Query: 75 LTPDAVTYNTV 85
+P VTYN +
Sbjct: 241 PSPTLVTYNVI 251
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 41 KVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
K ++ I N +LS RN ++ + + + I++ GL+PD VTYN++
Sbjct: 628 KPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSL 672
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I GK G +AL+++ S+ + N N +LS L + + +K+ +
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM 447
Query: 71 KQSGLTPDAVTYNTV 85
K +G +P+ T+NT+
Sbjct: 448 KSNGCSPNRATWNTM 462
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ ++ GK G +AL + + + S + N +++ VR G + + + + +
Sbjct: 318 TYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMM 377
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ P+A+TY TV
Sbjct: 378 TKKGVMPNAITYTTV 392
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 2 QQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
++HG K + ++S + +N +A I SI ++ ++ N ++ VR G+
Sbjct: 623 KKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGEC 682
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++ +++S L PD V+YNTV
Sbjct: 683 WKAEEILKTLEKSQLKPDLVSYNTV 707
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 36/74 (48%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S + + G KA EI ++ K ++ N ++ R G + ++++ ++
Sbjct: 668 TYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEM 727
Query: 71 KQSGLTPDAVTYNT 84
+ G+ P TYNT
Sbjct: 728 TERGIRPCIFTYNT 741
Score = 34.7 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 36/75 (48%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ + + G S +A + +T + N ++ + GK + +LKLF +
Sbjct: 353 TYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM 412
Query: 71 KQSGLTPDAVTYNTV 85
K++G P+ TYN V
Sbjct: 413 KEAGCVPNTCTYNAV 427
>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Brachypodium distachyon]
Length = 791
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 40/77 (51%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ + L + G A+ YN + K N+ N ++ GKF + +FD
Sbjct: 352 VITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFD 411
Query: 69 KIKQSGLTPDAVTYNTV 85
+I+ +G PD VT+NT+
Sbjct: 412 EIRSAGFVPDVVTWNTL 428
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 41/81 (50%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S ++Y+S + + G+ K I I + + + N ++ R G+ + + +LF
Sbjct: 631 STATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLF 690
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
++K SGL PD VTYN +S
Sbjct: 691 SEMKCSGLVPDIVTYNIFVKS 711
Score = 40.8 bits (94), Expect = 0.098, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 42/78 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y S I + G +A+EIY + + ++ N +LS L R G++E + KLF ++
Sbjct: 459 TYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEM 518
Query: 71 KQSGLTPDAVTYNTVYQS 88
+ PD ++Y+++ +
Sbjct: 519 ENLDSRPDELSYSSLLHA 536
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 35/59 (59%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
+ L + +S+ + ++ + N ++SC R ++ + K+FD+++ +G PD VT N++
Sbjct: 230 EVLALVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSL 288
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 36/77 (46%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ I G+ G +A +++ + ++ N+ + V N FE ++ L +
Sbjct: 669 SYNTMIYAYGRKGQMKEASRLFSEMKCSGLVPDIVTYNIFVKSYVANSMFEEAIDLVRYM 728
Query: 71 KQSGLTPDAVTYNTVYQ 87
G P+ TYNT+ Q
Sbjct: 729 VTHGCKPNERTYNTILQ 745
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 36/77 (46%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I+ ++ I GKNG K EI + + + S ++ N ++ R G E +
Sbjct: 597 INVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRLGDCEKCENILT 656
Query: 69 KIKQSGLTPDAVTYNTV 85
+IK S PD +YNT+
Sbjct: 657 EIKSSRARPDRYSYNTM 673
Score = 34.3 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+Q G S+ +Y+S I K+G +A ++ + + + +V ++S L R GK
Sbjct: 308 MEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTTLVSGLDRAGK 367
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
++++ ++++ ++G P+ TYN +
Sbjct: 368 IDAAIGTYNEMLRNGCKPNLCTYNAL 393
>gi|299115824|emb|CBN74387.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 91
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
++S I K +AL I + + NV N ++ GK+E +L+L ++++
Sbjct: 13 FNSAIDARAKGDQWSEALNIPRDMPTAAVAPNVINYNSAITACATGGKWEEALELLNEMR 72
Query: 72 QSGLTPDAVTYNTVYQS 88
+GLTPDA+ +N+ +S
Sbjct: 73 VAGLTPDAIRFNSAIES 89
>gi|297802776|ref|XP_002869272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315108|gb|EFH45531.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 468
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
G + IS+Y+S I+ G++ AL ++NS+ + N+ ++ C +NG+ E ++
Sbjct: 143 GTSDISAYNSIIQMYSGCGSAEDALTVFNSMPER----NLETWCGVIRCFAKNGQGEDAI 198
Query: 65 KLFDKIKQSGLTPDAVTYNTVY 86
+F + K+ G PD + ++
Sbjct: 199 DIFSRFKEEGNRPDGEIFKDIF 220
>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 44/80 (55%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y+S + + + L AL +YN + + N ++L+ L +NGK + +LK
Sbjct: 163 KPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALK 222
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+FD++ Q G+ P+ + Y +
Sbjct: 223 MFDEMTQKGIPPNTMIYTII 242
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 19 LGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPD 78
L KNG + AL++++ +T + N I +ILS L + + + +L + +K SG PD
Sbjct: 211 LCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPD 270
Query: 79 AVTYNTV 85
++T N +
Sbjct: 271 SITCNAL 277
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 41/81 (50%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S ++Y+S + + G+ K I I + + + N ++ R G+ + + +LF
Sbjct: 627 SAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLF 686
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
++K SGL PD VTYN +S
Sbjct: 687 SEMKCSGLKPDVVTYNIFVKS 707
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 40/80 (50%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y++ I L + G A+ Y+ + K N+ N ++ GKF +
Sbjct: 345 KPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMA 404
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+FD+ + +G PD VT+NT+
Sbjct: 405 VFDEFRSAGFVPDIVTWNTL 424
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 35/59 (59%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +E+ S+ + + + N ++SC R ++ + ++FD++K SG PD VT+N++
Sbjct: 226 EVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSL 284
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y S I + G A++IY + + +V N +LS L R G++E + KLF ++
Sbjct: 455 TYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEM 514
Query: 71 KQSGLTPDAVTYNTVYQS 88
++ PD +Y+++ +
Sbjct: 515 EERDCKPDEYSYSSLLHA 532
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 38/77 (49%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ I G+ G +A +++ + K +V N+ + V N FE +++L +
Sbjct: 665 SYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYM 724
Query: 71 KQSGLTPDAVTYNTVYQ 87
G P+ TYN++ +
Sbjct: 725 VTQGCKPNERTYNSIVE 741
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+++S + GK +A+E+ + +V N ++S V++G E ++ L ++
Sbjct: 280 TFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEM 339
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ PD VTY T+
Sbjct: 340 EVKGMKPDVVTYTTL 354
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 43/78 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +Y+S I K+G +A+ + + + K +V ++S L R GK ++++ +
Sbjct: 312 SVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEY 371
Query: 68 DKIKQSGLTPDAVTYNTV 85
D++ ++G P+ TYN +
Sbjct: 372 DEMVRNGCKPNLCTYNAL 389
Score = 34.3 bits (77), Expect = 8.5, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 39/84 (46%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ I+ ++ + GKN K +I + + + + ++ N ++ R G E
Sbjct: 586 QKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCE 645
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
+ +IK SG+ PD +YNTV
Sbjct: 646 KCENILTEIKSSGVRPDRYSYNTV 669
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSI--TDESDKVNVFICNLILSCLVRNGKFESSLKL 66
I S++S I L K G +A I++ I T E VN+F + CL+ GK + ++
Sbjct: 491 ILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLI--GKMSEAFRV 548
Query: 67 FDKIKQSGLTPDAVTYNTV 85
D + G+ PD VTY T+
Sbjct: 549 HDAMVSVGIEPDIVTYGTL 567
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESD--KVNVFICNLILSCLVRNGKFESSLKLFD 68
SYS+ +K + +G S AL+I + NV + + ++ L + GK + LF
Sbjct: 176 SYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFH 235
Query: 69 KIKQSGLTPDAVTYNTVYQS 88
++ Q G+ P+ VTYN+V +
Sbjct: 236 EMTQQGVPPNVVTYNSVIHA 255
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 39/74 (52%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
YS+ + L K G +A ++++ +T + NV N ++ L + + + + ++
Sbjct: 214 YSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMV 273
Query: 72 QSGLTPDAVTYNTV 85
+G+ PD VTYNT+
Sbjct: 274 GNGVQPDNVTYNTL 287
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 42/81 (51%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I +YS + L +N + +A+ ++ + + K ++ I N+++S + + + E + LF
Sbjct: 630 TIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLF 689
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
I GL P TY + ++
Sbjct: 690 ASIPDYGLVPTVQTYTIMMEN 710
>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 789
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 20 GKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDA 79
GK N+L+ L + E N+ ICN + LV+ K E +L+ ++++ +G+ PD
Sbjct: 245 GKLRNALRVLTLMQKAGVEP---NLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDI 301
Query: 80 VTYNTV 85
VTYN++
Sbjct: 302 VTYNSL 307
>gi|302795498|ref|XP_002979512.1| hypothetical protein SELMODRAFT_52562 [Selaginella moellendorffii]
gi|300152760|gb|EFJ19401.1| hypothetical protein SELMODRAFT_52562 [Selaginella moellendorffii]
Length = 419
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+Q+ + S+ ++ I LGK G +A ++ I+ K + N +L+ L +NG+
Sbjct: 53 IQERMEPSLVIHNMLIDCLGKAGYVDRACSVFQEISKRGLKPELVTYNSLLAVLCKNGRR 112
Query: 61 ESSLKLFDKIKQS-GLTPDAVTYNTV 85
++ KLF +K+ G++PD VTY+ +
Sbjct: 113 YAAWKLFLAMKEEDGISPDCVTYSIL 138
Score = 38.9 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G K Y+S + + A+ Y + E + ++ I N+++ CL + G
Sbjct: 17 MEEGGNKADFYVYTSLVSGHCQANRPGDAIVHYEQMIQERMEPSLVIHNMLIDCLGKAGY 76
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + +F +I + GL P+ VTYN++
Sbjct: 77 VDRACSVFQEISKRGLKPELVTYNSL 102
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ +G T + +Y+ + LG+ G+ A ++ + + + + + +L L R+ K
Sbjct: 298 MKANGLTPDLVTYNKLMAMLGETGDFKGAFKLLQDLESCGLQADGYTYSALLHNLGRHRK 357
Query: 60 FESSLKLFDKIKQSGLTPDAVTYN 83
+++ KLFD+++ G P A+TYN
Sbjct: 358 VKTACKLFDELENRGHKPCAMTYN 381
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 41/81 (50%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S ++Y+S + + G+ K I I + + + N ++ R G+ + + +LF
Sbjct: 609 SAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLF 668
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
++K SGL PD VTYN +S
Sbjct: 669 SEMKCSGLKPDVVTYNIFVKS 689
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 40/80 (50%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y++ I L + G A+ Y+ + K N+ N ++ GKF +
Sbjct: 327 KPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMA 386
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+FD+ + +G PD VT+NT+
Sbjct: 387 VFDEFRSAGFVPDIVTWNTL 406
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 35/59 (59%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +E+ S+ + + + N ++SC R ++ + ++FD++K SG PD VT+N++
Sbjct: 208 EVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSL 266
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y S I + G A++IY + + +V N +LS L R G++E + KLF ++
Sbjct: 437 TYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEM 496
Query: 71 KQSGLTPDAVTYNTVYQS 88
++ PD +Y+++ +
Sbjct: 497 EERDCKPDEYSYSSLLHA 514
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 38/77 (49%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ I G+ G +A +++ + K +V N+ + V N FE +++L +
Sbjct: 647 SYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYM 706
Query: 71 KQSGLTPDAVTYNTVYQ 87
G P+ TYN++ +
Sbjct: 707 VTQGCKPNERTYNSIVE 723
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+++S + GK +A+E+ + +V N ++S V++G E ++ L ++
Sbjct: 262 TFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEM 321
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ PD VTY T+
Sbjct: 322 EVKGMKPDVVTYTTL 336
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 43/78 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +Y+S I K+G +A+ + + + K +V ++S L R GK ++++ +
Sbjct: 294 SVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEY 353
Query: 68 DKIKQSGLTPDAVTYNTV 85
D++ ++G P+ TYN +
Sbjct: 354 DEMVRNGCKPNLCTYNAL 371
Score = 34.3 bits (77), Expect = 8.5, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 39/84 (46%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ I+ ++ + GKN K +I + + + + ++ N ++ R G E
Sbjct: 568 QKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCE 627
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
+ +IK SG+ PD +YNTV
Sbjct: 628 KCENILTEIKSSGVRPDRYSYNTV 651
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 41/81 (50%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S ++Y+S + + G+ K I I + + + N ++ R G+ + + +LF
Sbjct: 627 SAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLF 686
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
++K SGL PD VTYN +S
Sbjct: 687 SEMKCSGLKPDVVTYNIFVKS 707
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y++ I L + G A+ Y+ + K N+ N ++ GKF +
Sbjct: 345 KPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMA 404
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+FD+++ +G PD VT+NT+
Sbjct: 405 VFDELRSAGFVPDIVTWNTL 424
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 35/59 (59%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +E+ S+ + + + N ++SC R ++ + ++FD++K SG PD VT+N++
Sbjct: 226 EVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSL 284
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y S I + G A++IY + + +V N +LS L R G++E + KLF ++
Sbjct: 455 TYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEM 514
Query: 71 KQSGLTPDAVTYNTVYQS 88
++ PD +Y+++ +
Sbjct: 515 EERDCKPDEYSYSSLLHA 532
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 38/77 (49%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ I G+ G +A +++ + K +V N+ + V N FE +++L +
Sbjct: 665 SYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYM 724
Query: 71 KQSGLTPDAVTYNTVYQ 87
G P+ TYN++ +
Sbjct: 725 VTQGCKPNERTYNSIVE 741
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+++S + GK +A+E+ + +V N ++S V++G E ++ L ++
Sbjct: 280 TFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEM 339
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ PD VTY T+
Sbjct: 340 EVKGIKPDVVTYTTL 354
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 43/78 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +Y+S I K+G +A+ + + + K +V ++S L R GK ++++ +
Sbjct: 312 SVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEY 371
Query: 68 DKIKQSGLTPDAVTYNTV 85
D++ ++G P+ TYN +
Sbjct: 372 DEMVRNGCKPNLCTYNAL 389
Score = 34.3 bits (77), Expect = 8.5, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 39/84 (46%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ I+ ++ + GKN K +I + + + + ++ N ++ R G E
Sbjct: 586 QKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCE 645
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
+ +IK SG+ PD +YNTV
Sbjct: 646 KCENILTEIKSSGVRPDRYSYNTV 669
>gi|115482764|ref|NP_001064975.1| Os10g0499500 [Oryza sativa Japonica Group]
gi|22165074|gb|AAM93691.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31432889|gb|AAP54465.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639584|dbj|BAF26889.1| Os10g0499500 [Oryza sativa Japonica Group]
gi|125575293|gb|EAZ16577.1| hypothetical protein OsJ_32049 [Oryza sativa Japonica Group]
gi|215694503|dbj|BAG89496.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215697419|dbj|BAG91413.1| unnamed protein product [Oryza sativa Japonica Group]
gi|295901486|dbj|BAJ07249.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
Group]
gi|295901490|dbj|BAJ07251.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
Group]
Length = 506
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 44/78 (56%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ SYS+ I L K G+ KA Y + D NV I + I++ L + + ++++
Sbjct: 197 NVVSYSTVIDGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVH 256
Query: 68 DKIKQSGLTPDAVTYNTV 85
D++ ++G+TP+ TY ++
Sbjct: 257 DRMVKNGVTPNCFTYTSL 274
Score = 42.4 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 51/113 (45%), Gaps = 35/113 (30%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNV----------------------- 44
++ +YSS++ +L KNG +A +I++S+ K ++
Sbjct: 302 NVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLF 361
Query: 45 ------------FICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
++ N ++ + GK + ++ +F K++Q GL P+ VTY+T+
Sbjct: 362 DLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTYSTL 414
Score = 38.1 bits (87), Expect = 0.73, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S + +G +A++ + + NV + + L +NG+ + K+FD +
Sbjct: 270 TYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSM 329
Query: 71 KQSGLTPDAVTYNTV 85
+ GL PD TY+++
Sbjct: 330 VKRGLKPDITTYSSL 344
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 37/73 (50%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
YSS I L K KA+E+++ + N F ++ +G+ ++K +K+
Sbjct: 236 YSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMC 295
Query: 72 QSGLTPDAVTYNT 84
+G+ P+ VTY++
Sbjct: 296 SNGVEPNVVTYSS 308
>gi|356529499|ref|XP_003533328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 447
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTS-ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G+ + + +YSS I L KNG+ +A+ ++N + D+ + N+F ++L L + G+
Sbjct: 301 MRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGR 360
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + ++F + G + TYN +
Sbjct: 361 LKDAQEVFQDLLTKGYHLNVYTYNVM 386
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G ++ +YS+ + GN A+E++ + D + N+ N+I+ L R GK
Sbjct: 318 MEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGK 377
Query: 60 FESSLKLFDKIKQSGLTPDAVTYN 83
+ F+K+ Q L PD T+N
Sbjct: 378 LAKAYFYFEKLLQRRLCPDVYTFN 401
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 28 ALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
+E++ S+ + N+ ++++ + R G E +L++F ++ G+ PD V +NT+
Sbjct: 417 GVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTL-- 474
Query: 88 SDHITWI 94
I W+
Sbjct: 475 ---IRWL 478
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 2 QQHGKTSIS---SYSSYIKFLGKNGNSLKALEIYNSITDESDKV-NVFICNLILSCLVRN 57
++H T++ +Y+S I L K G L+A ++++ E + + I+ L +
Sbjct: 176 RKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKL 235
Query: 58 GKFESSLKLFDKIKQSGLTPDAVTY 82
G+ E + F +++ G PDAVTY
Sbjct: 236 GRVEEGCERFHEMRNRGYEPDAVTY 260
>gi|224141051|ref|XP_002323888.1| predicted protein [Populus trichocarpa]
gi|222866890|gb|EEF04021.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M Q+G K + + I K GN AL I+ ++ D K N+ CN +++ L + G+
Sbjct: 215 MVQNGLKPREDTLHAVIGACSKKGNWDLALNIFQNMLDHGLKPNLIACNALINLLGKAGE 274
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + K+F +K G TPD T+N +
Sbjct: 275 IKLAFKVFKILKSLGHTPDEYTWNAL 300
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 39/71 (54%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+T + S I L ++ AL++ S+ + N CN +LSCL+R+ E +L+
Sbjct: 44 ETDENELSRRILMLSRSNKIRSALQLLRSMEFSGLQPNTHACNSLLSCLIRHELHEDALR 103
Query: 66 LFDKIKQSGLT 76
+F+ +K++ +T
Sbjct: 104 VFEYMKKNEIT 114
>gi|224149779|ref|XP_002336862.1| predicted protein [Populus trichocarpa]
gi|222837029|gb|EEE75408.1| predicted protein [Populus trichocarpa]
Length = 370
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 46/83 (55%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ +YS I L + G +A +++ + D + N N ++ V+ G+ E L+
Sbjct: 283 KPNVYTYSIVIDSLCRCGQITRAHDVFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQ 342
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
+++++K+ G PD VTYN + ++
Sbjct: 343 VYNQMKRLGCEPDTVTYNFLIET 365
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 41/74 (55%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ ++ + GN +A ++ + K NV+ ++++ L R G+ + +F ++
Sbjct: 254 YTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDVFAEML 313
Query: 72 QSGLTPDAVTYNTV 85
+G P+++TYN++
Sbjct: 314 DAGCQPNSITYNSL 327
>gi|255635248|gb|ACU17978.1| unknown [Glycine max]
Length = 234
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
MQ+ G I+ S + L + + ALE + + E V+V I N+ + L + G+
Sbjct: 106 MQKLGFPVIADLSKFFSVLVEKKGPIMALETFGQLK-EKGHVSVEIYNIFMDSLHKIGEV 164
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNT 84
+ +L LFD++K L PD+ TY T
Sbjct: 165 KKALSLFDEMKGLSLKPDSFTYCT 188
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFI-CNLILSCLVRNGK 59
+++ G S+ Y+ ++ L K G KAL +++ + S K + F C IL CLV G+
Sbjct: 140 LKEKGHVSVEIYNIFMDSLHKIGEVKKALSLFDEMKGLSLKPDSFTYCTAIL-CLVDLGE 198
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQSDHITW 93
+ + ++I + P Y+++ + W
Sbjct: 199 IKEACACHNRIIEMSCIPSVAAYSSLTKRALPNW 232
>gi|255572205|ref|XP_002527042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533604|gb|EEF35342.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 520
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 37 DESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
DE + +V N ++SC ++GK E +L++F K++ SG P++VT TV S
Sbjct: 89 DEMPERDVACWNTVISCYYQDGKAEKALEMFGKMRDSGFEPNSVTLTTVISS 140
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 31/45 (68%)
Query: 41 KVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
K NV + N+++S V G + +L ++D++K + + PDAVT++++
Sbjct: 295 KANVVLWNVMISGYVTIGDYVKALDMYDEMKIASVKPDAVTFSSI 339
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 41/77 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
++ ++F + G +A+++ ++ N +CN++++ + + G+ + + + + +
Sbjct: 287 TFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM 346
Query: 71 KQSGLTPDAVTYNTVYQ 87
G +PD ++Y TV +
Sbjct: 347 GSYGCSPDTISYTTVLK 363
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M +HG T ++ +Y++ + + + NS +ALE+ + + ++ + I+ L R +
Sbjct: 518 MMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDR 577
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E ++K+F ++ G+ P AV YN +
Sbjct: 578 VEEAIKMFHIVQDLGMRPKAVIYNKI 603
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 45/82 (54%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ S+ +Y+ ++ + K+ +A+E+ + + + N+ N+I++ + R G+ + + +
Sbjct: 177 QPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARE 236
Query: 66 LFDKIKQSGLTPDAVTYNTVYQ 87
+++ G PD V+Y TV +
Sbjct: 237 FLNRLSSYGFQPDTVSYTTVLK 258
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I+ L G +AL + + + + +V ++L + ++ F ++++ D++
Sbjct: 147 TYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEM 206
Query: 71 KQSGLTPDAVTYNTV 85
+ G TP+ VTYN +
Sbjct: 207 RAKGCTPNIVTYNVI 221
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 44/85 (51%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+Q+ ++ +++ + F + G +A+E+ + + N+ N +L + +
Sbjct: 484 LQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNS 543
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
E +L+L + +G++PD VTY+++
Sbjct: 544 EEALELLHGLVSNGVSPDIVTYSSI 568
>gi|255578133|ref|XP_002529936.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530566|gb|EEF32444.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 548
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++S+++ ++ GK G+ A ++N + K N+ + +++ L +NG E ++ LF
Sbjct: 267 AVSTFNKILEMYGKCGDMDSAFAVFNKMP----KRNLTTWDTMIAWLAKNGLGEDAIDLF 322
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
+ KQ+GL PDA + V+ +
Sbjct: 323 SQFKQAGLVPDAQLFIGVFSA 343
>gi|15220166|ref|NP_178170.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75264854|sp|Q9M8M3.1|PP136_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80550, mitochondrial; Flags: Precursor
gi|6730729|gb|AAF27119.1|AC018849_7 unknown protein; 31926-33272 [Arabidopsis thaliana]
gi|332198297|gb|AEE36418.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 448
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTS-ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M G T + SYS Y+ + K+G KA+++Y + K++V N ++ + +
Sbjct: 215 MDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQG 274
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E +++F ++++ G P+ T+NT+
Sbjct: 275 VEFGIRVFREMRERGCEPNVATHNTI 300
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 42/81 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y++ I+ +G + + ++ + + + NV N I+ L +G+ + +
Sbjct: 256 KLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYR 315
Query: 66 LFDKIKQSGLTPDAVTYNTVY 86
+ D++ + G PD++TY ++
Sbjct: 316 MLDEMPKRGCQPDSITYMCLF 336
>gi|15221377|ref|NP_177613.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207514|sp|Q9SSF9.1|PP123_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74750
gi|5882748|gb|AAD55301.1|AC008263_32 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332197508|gb|AEE35629.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 855
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G + + +YS I LGK G+ A ++ + + N+ N++++ +
Sbjct: 455 MQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARN 514
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
+E++LKL+ ++ +G PD VTY+ V +
Sbjct: 515 YETALKLYRDMQNAGFQPDKVTYSIVME 542
Score = 37.4 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G + +Y + I K G A+++Y + + + F ++I++CL + G
Sbjct: 420 MQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGH 479
Query: 60 FESSLKLFDKIKQSGLTPDAVTYN 83
++ +LF ++ G TP+ VT+N
Sbjct: 480 LPAAHRLFCEMVGQGCTPNLVTFN 503
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 31/71 (43%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y + GK GN KA + Y ++ + NV CN +LS +R + + L +
Sbjct: 572 YGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSML 631
Query: 72 QSGLTPDAVTY 82
GL P TY
Sbjct: 632 ALGLHPSLQTY 642
>gi|412988833|emb|CCO15424.1| predicted protein [Bathycoccus prasinos]
Length = 975
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSI--TDESDKVNVFIC-NLILSCLVRNGKFESSLKLF 67
++ S +K ++ LKAL + + T+E++ N + N+++S V+ G+ + + +
Sbjct: 473 AWCSLLKAHSRSSEPLKALSAFEEMLKTNETETKNSLLAHNILMSACVKGGRPDWARDML 532
Query: 68 DKIKQSGLTPDAVTYNT 84
DK K++GL PD+++Y T
Sbjct: 533 DKAKENGLKPDSISYAT 549
>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
Length = 987
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +YS ++ L K +AL I + +T K N+ +I+S +++ GK + +
Sbjct: 627 KADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKS 686
Query: 66 LFDKIKQSGLTPDAVTYNTVYQSDH 90
LF+++ SG P A TY TV+ S +
Sbjct: 687 LFNEMISSGHKPSATTY-TVFISSY 710
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 42/80 (52%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y+S I K G ALE++ + E N + ++ L+++ K ++ L
Sbjct: 457 NVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALI 516
Query: 68 DKIKQSGLTPDAVTYNTVYQ 87
K+++ G+TP +TY T+ Q
Sbjct: 517 TKMQEDGITPGVITYTTLIQ 536
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K +I +Y+ I + K G A ++N + K + + +S + G+ E +
Sbjct: 662 KCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEH 721
Query: 66 LFDKIKQSGLTPDAVTYN 83
L ++++ G+TPD VTYN
Sbjct: 722 LIGEMERDGVTPDVVTYN 739
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y S I L ++ KA+ + + ++ V ++ + +F+++ +LF+ +
Sbjct: 495 TYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMM 554
Query: 71 KQSGLTPDAVTYNTV 85
+Q+GLTPD YN +
Sbjct: 555 EQNGLTPDEQAYNVL 569
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S + K GN+ A + + +E K +++ +++L L + K +L + D++
Sbjct: 597 TYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQM 656
Query: 71 KQSGLTPDAVTYNTV 85
SG+ + V Y +
Sbjct: 657 TVSGVKCNIVAYTII 671
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 22/38 (57%)
Query: 48 NLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
NL L L+R E KL+ + Q GL PD VTYNT+
Sbjct: 148 NLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTM 185
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M + G T S++SY+S + + N K+ +I+ I D+ + +V N+++ RN
Sbjct: 626 MYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREILDKGIEPDVISYNIVIYAYCRNDM 685
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNT 84
+ + ++ +++K PD VTYNT
Sbjct: 686 MDEAKRIIEEMKVPAPVPDVVTYNT 710
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 39/70 (55%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGL 75
+ LGK G +A + +++ + +V+V+ +++ N K+ +LK+F K+K+ G
Sbjct: 151 VSILGKTGRVSRAASLLHNLEADGFEVDVYGYTSLITAYANNKKYRDALKVFGKMKEVGC 210
Query: 76 TPDAVTYNTV 85
P +TYN +
Sbjct: 211 EPTLITYNAI 220
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + GK+ +A+E+ + S + +V N ++S VR G E +L L K+
Sbjct: 287 TYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKM 346
Query: 71 KQSGLTPDAVTYNTV 85
G+ PD TY T+
Sbjct: 347 VDKGIKPDVYTYTTL 361
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 40/80 (50%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y++ + G A+E++ + K N+ N ++ GKFE +K
Sbjct: 352 KPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVK 411
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+F +IK +PD VT+NT+
Sbjct: 412 VFKEIKVCKCSPDIVTWNTL 431
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 48 NLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
N ++SC +E +L LF++IK +G PDAVTYN +
Sbjct: 254 NTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNAL 291
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 42/78 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
++++ I G+ G+ +A+ Y + + ++ N +L+ L R G +E S K+ ++
Sbjct: 462 TFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEM 521
Query: 71 KQSGLTPDAVTYNTVYQS 88
K G P+ VTY+++ +
Sbjct: 522 KDGGCKPNEVTYSSLLHA 539
>gi|226492862|ref|NP_001141929.1| uncharacterized protein LOC100274078 [Zea mays]
gi|194706478|gb|ACF87323.1| unknown [Zea mays]
gi|414585156|tpg|DAA35727.1| TPA: hypothetical protein ZEAMMB73_571639 [Zea mays]
Length = 442
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+Q G + +Y++ I +G A+ +Y + D K N+ N I+ + G+
Sbjct: 238 MKQRGIRIDTVAYNTAIHAVGMAQGVDSAVRLYRQMVDAGCKPNIATYNAIIKLFCKEGR 297
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
F+ +++++G PD +TY+ +Q
Sbjct: 298 FKEGYAFVQQMRKTGCKPDVLTYHCFFQ 325
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 39/77 (50%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ SYS Y+ L K+G KA +++ + +++ N + + +S+++L+
Sbjct: 212 LHSYSIYMDALAKSGKPWKAFKVFKEMKQRGIRIDTVAYNTAIHAVGMAQGVDSAVRLYR 271
Query: 69 KIKQSGLTPDAVTYNTV 85
++ +G P+ TYN +
Sbjct: 272 QMVDAGCKPNIATYNAI 288
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 42/77 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I + G A +++N + D ++ N++L CL NGK E +L + + +
Sbjct: 886 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 945
Query: 71 KQSGLTPDAVTYNTVYQ 87
++S + D +TYN + Q
Sbjct: 946 QKSEMDVDIITYNIIIQ 962
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 42/85 (49%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
M++ + ++++ I K GN +A E+Y + S N N I++ L +G+
Sbjct: 238 MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRL 297
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+ K FD + G P+ VTYNT+
Sbjct: 298 YDAKKTFDLMASKGCFPNVVTYNTL 322
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 37/74 (50%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
+++ I K GN L+A +Y + S NVF N +++ +G + +FD +
Sbjct: 782 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 841
Query: 72 QSGLTPDAVTYNTV 85
G PD VTYNT+
Sbjct: 842 SKGCFPDVVTYNTL 855
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y+ + L NG KAL + + V++ N+I+ L R K + + LF
Sbjct: 919 IVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFR 978
Query: 69 KIKQSGLTPDAVTYNTV 85
+ + G+ PDA+ Y T+
Sbjct: 979 SLTRKGVKPDAIAYITM 995
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
NV + N ++ L +NG+ +L+L +++++ GL D VTYNT+
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTL 217
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 38/74 (51%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y++ I L KNG ALE+ N + + +V N +L+ L +G++ + ++ +
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM 238
Query: 72 QSGLTPDAVTYNTV 85
+ + PD VT+ +
Sbjct: 239 KRSINPDVVTFTAL 252
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
NV I N +++ L +N ++L++F +++ G+ DAVTYNT+
Sbjct: 708 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTL 750
>gi|357135408|ref|XP_003569301.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49240-like [Brachypodium distachyon]
Length = 665
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESD-----KVNVFICNLILSCLVRNGKFESSLK 65
SY+ + LG+NG A+++++ + E D VN+ N+++ R +F+ +++
Sbjct: 314 SYNMVLDALGRNGKLEDAVQLFDRMCKEHDPPRRIAVNLGSFNVMVDAYCRAERFQDAVE 373
Query: 66 LFDKIKQSGLTPDAVTYNTVYQSDHITWI 94
+F K+ + +PDA++YN + I W+
Sbjct: 374 VFGKMGEKRCSPDALSYNNL-----IDWL 397
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ I +LG+N +A +YN + + S + + L++ ++ + + ++ F+K+
Sbjct: 389 SYNNLIDWLGRNELVGEAEGLYNEMGERSINPDEYTYVLLIESCLKVDRVDDAVGYFNKM 448
Query: 71 KQSGLTPDAVTYNTV 85
GL P+A +N V
Sbjct: 449 FDVGLRPNANAFNKV 463
>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
Length = 347
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ I L K G + +ALE+ + + + + ++ I S L R K E +++ F K+
Sbjct: 193 SYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKV 252
Query: 71 KQSGLTPDAVTYNTV 85
+ G+ P V YN +
Sbjct: 253 QDMGIRPTVVLYNAI 267
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I SY++ + L +NG A+++ + + + + N ++ L + GK + +L+L D
Sbjct: 156 IVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLD 215
Query: 69 KIKQSGLTPDAVTYNTV 85
++ GL PD +TY T+
Sbjct: 216 EMISKGLQPDIITYTTI 232
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 30/46 (65%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
NV N+++S L R G E ++++ ++I + G TP++++YN + +
Sbjct: 85 NVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHA 130
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 44/80 (55%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +Y+S + + + L AL +YN + + N ++L+ L +NGK + +LK
Sbjct: 163 KPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALK 222
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+FD++ Q G+ P+ + Y +
Sbjct: 223 MFDEMTQKGIPPNTMIYTII 242
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 19 LGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPD 78
L KNG + AL++++ +T + N I +ILS L + + + +L + +K SG PD
Sbjct: 211 LCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPD 270
Query: 79 AVTYNTV 85
++T N +
Sbjct: 271 SITCNAL 277
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 42/81 (51%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDK 69
+S + ++ L ++G LKA ++ + D ++ N++++ + + KLF +
Sbjct: 495 ASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRE 554
Query: 70 IKQSGLTPDAVTYNTVYQSDH 90
++ G +PD+VTY T+ H
Sbjct: 555 LQLKGHSPDSVTYGTLIDGFH 575
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K I + + I L K G A E++ +++E + NV +++ R G+ + +
Sbjct: 432 KLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANV 491
Query: 66 LFDKIKQSGLTPDAVTYNTVYQ 87
L K++ +G TPD +TYNT+ +
Sbjct: 492 LIQKMEANGCTPDIITYNTLMR 513
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ HG S +Y ++ L KN +A++++ + + K+ + N ++ L + GK
Sbjct: 391 MKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGK 450
Query: 60 FESSLKLFDKIKQSGLTPDAVTY 82
E++ +LF+K+ G P+ VTY
Sbjct: 451 LETAWELFEKLSNEGHEPNVVTY 473
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%)
Query: 31 IYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
I N + D+ + ++ N+++ L + GK + KL + +SG+ PD VTYN++ +
Sbjct: 247 IPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIE 303
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 39/85 (45%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
M+ S+SS++ + L K + + +YN + + N++L+CL +
Sbjct: 61 MRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRL 120
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
F I + G +P+ VTYNT+
Sbjct: 121 REGFAAFAGILRRGYSPNIVTYNTL 145
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 29/42 (69%)
Query: 44 VFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
VF N+++ C+ + G E++ LF+++K GL PD VTYN++
Sbjct: 130 VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSM 171
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I GK G + + + D + +V N +++C + GK L+ + ++
Sbjct: 167 TYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM 226
Query: 71 KQSGLTPDAVTYNTV 85
K +GL P+ V+Y+T+
Sbjct: 227 KGNGLKPNVVSYSTL 241
Score = 37.4 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESD-KVNVFICNLILSCLVRNGKFESSL 64
+ ++ ++ I L KN KA++ +N I+++ + N I ++ L ++ + E++
Sbjct: 442 EVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAAT 501
Query: 65 KLFDKIKQSGLTPDAVTYNTV 85
LF+++ Q GL PD Y ++
Sbjct: 502 TLFEQMVQKGLVPDRTAYTSL 522
>gi|414871052|tpg|DAA49609.1| TPA: hypothetical protein ZEAMMB73_878928 [Zea mays]
Length = 807
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 44/78 (56%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S +YS+ I L K G+ +A +I+ S+T+E ++++ CN +++ +G K+
Sbjct: 284 SRHTYSTIIHGLCKVGSVNEAFDIFQSVTEEGMELDIVTCNSLINGFRLHGHTREIPKMI 343
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ ++ G+ PD VTY +
Sbjct: 344 EMMRGLGVEPDVVTYTIL 361
>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
Length = 384
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G++ S +Y++ I+ G+ G +ALE+Y+ + +V N+ ++ + G
Sbjct: 114 MKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGL 173
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E +L D++ G+ PD VTYNT+
Sbjct: 174 LEDMERLLDEMDTKGVPPDQVTYNTL 199
Score = 40.8 bits (94), Expect = 0.099, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + K +KA EI +T+ + N++ N++LS + + +LF+ +
Sbjct: 195 TYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENL 254
Query: 71 KQSGLTPDAVTYNTV 85
K G+ P+ VTY+ +
Sbjct: 255 KSKGVVPNIVTYSAM 269
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 39/82 (47%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q ++ +Y++ IK G +++ + D+ + N + N ++ R G F+
Sbjct: 81 QDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFK 140
Query: 62 SSLKLFDKIKQSGLTPDAVTYN 83
+L+L+D++ G D TYN
Sbjct: 141 EALELYDEMDGVGCAKDVHTYN 162
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 15 YIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSG 74
Y++ K ++L+ LE+ + D++ + N +++ LV +G+ E++ K+ D +KQ
Sbjct: 27 YLRQKSKLDHALRLLEVMKESGKKPDEI---LYNCLVNGLVNSGRLEAAEKILDDMKQDK 83
Query: 75 LTPDAVTYNTV 85
++ + VTY +
Sbjct: 84 VSANLVTYTNL 94
>gi|255660994|gb|ACU25666.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 376
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ G +YS+ I L K N KA+ + N + K N + N +++ LV KFE
Sbjct: 122 QKGGVLDAFAYSAMINGLCKEANFDKAVSVLNGMIKSGCKPNAHVYNTLINGLVAASKFE 181
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
++ +F ++ +P +TYNT+
Sbjct: 182 DAIIVFREMGTMHCSPTIITYNTL 205
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 45/81 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+ +YS +K L + +AL+++N +T + K +V + N+++ L GK + +L L+
Sbjct: 233 GVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVRMHNILIHGLCSVGKMQLALSLY 292
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
+ + P+ V++NT+ +
Sbjct: 293 FDMNRWKCAPNLVSHNTLMEG 313
>gi|224141275|ref|XP_002324000.1| predicted protein [Populus trichocarpa]
gi|222867002|gb|EEF04133.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYN--SITDESDKV---NVFICNLILSCLV 55
++ G+ + Y S IK G + A+ + + I E+D N+FI N +LS +
Sbjct: 145 LKDKGELPVQVYLSMIKGFGWDKKMEPAIALVDWLKIKKETDGTIVPNLFIYNSLLSAVK 204
Query: 56 RNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
++ ++E + K+ +++ Q G+ P+ VTYN +
Sbjct: 205 QSEQYEETEKILERMTQEGVAPNVVTYNIL 234
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 41/85 (48%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
++Q K ++ SY + + L K +A+ ++ + K NV+ ++ S R G F
Sbjct: 494 VEQGEKPTVISYGALLSALEKGRLYDEAVRVWEHMLKVGVKPNVYAYTIMASVFTRQGNF 553
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+ +++ +G+ P VTYN +
Sbjct: 554 RLVDAIINEMVSTGIEPTVVTYNAI 578
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVN-------VFICNLILSCLVRNGKF 60
S+S + I +GK ALE+Y + D+ K N V N++L+ + G +
Sbjct: 389 SLSVCNHVIWLMGKAKKWWAALEVYEDLLDKGPKPNNLSYELIVSYFNVLLTAAKKRGIW 448
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
++L +K+++ GL P + +N V
Sbjct: 449 RWGVRLLNKMEEKGLKPGSKEWNAV 473
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 41/73 (56%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+S + + ++ + +I +T E NV N+++ V+ G+ + +L + ++++
Sbjct: 196 YNSLLSAVKQSEQYEETEKILERMTQEGVAPNVVTYNILMVIYVKQGQAKKALDVLEEMR 255
Query: 72 QSGLTPDAVTYNT 84
++G TP A +Y++
Sbjct: 256 RNGFTPSAASYSS 268
>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 783
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K S ++S I+ + G KA+E + + D K ++F NLIL LVR F +L
Sbjct: 125 KISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALA 184
Query: 66 LFDKIKQSGLTPDAVTY 82
+++++ + L PD VTY
Sbjct: 185 VYNQMLKCNLNPDVVTY 201
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 40/77 (51%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y I L K + AL +++ +TD N I +++LS L + K + +LF
Sbjct: 198 VVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFS 257
Query: 69 KIKQSGLTPDAVTYNTV 85
K++ SG D +TYN +
Sbjct: 258 KMRASGCNRDLITYNVL 274
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I+S ++ L ++G LKA ++ + D ++ N++++ + G + KLF
Sbjct: 491 IASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFK 550
Query: 69 KIKQSGLTPDAVTYNTV 85
+++ G PD+VTY T+
Sbjct: 551 EMQLKGHMPDSVTYGTL 567
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 41/80 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +++ + FL + L AL +YN + + +V +++ L + K + +L
Sbjct: 160 KPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALV 219
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LFD++ G+ P+ + Y+ V
Sbjct: 220 LFDEMTDRGILPNQIIYSIV 239
>gi|384485437|gb|EIE77617.1| hypothetical protein RO3G_02321 [Rhizopus delemar RA 99-880]
Length = 1080
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 28 ALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
AL IY+ K F N+++S L + K ES++KLF+++KQ + P+++TY +
Sbjct: 761 ALLIYDEAKRHDVKPTTFFYNVVISKLAKARKLESAMKLFEEMKQFNIAPNSITYGAI 818
>gi|255561325|ref|XP_002521673.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539064|gb|EEF40660.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 341
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 46/84 (54%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
+Q K ++ ++S+ + +L G +A + + + +E +V+ N+++S L + G+ E
Sbjct: 166 KQRCKPNVRTFSTLMHYLCAKGEVNQAFGLLDRMENEGIEVDTITFNILISGLRKRGRIE 225
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
++L K+K G P+A +Y V
Sbjct: 226 EGMELLVKMKLKGCEPNAGSYQEV 249
>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 884
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+S I L G +AL++ + + ++F N+I++ + G+ +S+ F ++
Sbjct: 631 YNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMH 690
Query: 72 QSGLTPDAVTYNTV 85
G+TPD VTYNT+
Sbjct: 691 HIGVTPDTVTYNTL 704
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
++S++I L K G +A E ++ ++ + N F+ N ++ L GK +LKL ++
Sbjct: 595 AFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREM 654
Query: 71 KQSGLTPDAVTYNTV 85
+Q GL PD T N +
Sbjct: 655 RQKGLLPDIFTTNII 669
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 43/85 (50%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K S+ ++S+ I GN ++A +I+ I + NV + N ++S + +
Sbjct: 345 KPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANM 404
Query: 66 LFDKIKQSGLTPDAVTYNTVYQSDH 90
L+++++ G+ PD T+N + ++
Sbjct: 405 LYEEMRDKGIAPDGATFNILVAGNY 429
>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
Length = 987
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K + +YS ++ L K +AL I + +T K N+ +I+S +++ GK + +
Sbjct: 627 KADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKS 686
Query: 66 LFDKIKQSGLTPDAVTYNTVYQSDH 90
LF+++ SG P A TY TV+ S +
Sbjct: 687 LFNEMISSGHKPSATTY-TVFISSY 710
Score = 37.7 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 38/76 (50%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+S I K G ALE++ + E N + ++ L+++ K ++ L K++
Sbjct: 461 YTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQ 520
Query: 72 QSGLTPDAVTYNTVYQ 87
+ G+TP + Y T+ Q
Sbjct: 521 EDGITPGVIAYTTLIQ 536
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 39/78 (50%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K +I +Y+ I + K G A ++N + K + + +S + G+ E +
Sbjct: 662 KCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEH 721
Query: 66 LFDKIKQSGLTPDAVTYN 83
L ++++ G+TPD VTY+
Sbjct: 722 LIGEMERDGVTPDVVTYH 739
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S + K GN+ A + + +E K +++ +++L L + K +L + D++
Sbjct: 597 TYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQM 656
Query: 71 KQSGLTPDAVTYNTV 85
SG+ + V Y +
Sbjct: 657 TVSGVKCNIVAYTII 671
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 22/38 (57%)
Query: 48 NLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
NL L L+R E KL+ + Q GL PD VTYNT+
Sbjct: 148 NLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTM 185
>gi|356557985|ref|XP_003547290.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 692
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 42/77 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
++S+ IK GN K LE+Y + K NV N +L ++R+ K + + ++
Sbjct: 263 TFSTLIKMYSMAGNYDKCLEVYQEMKVLGVKPNVATYNTLLGAMLRSKKHRQAKAIHKEM 322
Query: 71 KQSGLTPDAVTYNTVYQ 87
K +G++PD +TY ++ +
Sbjct: 323 KSNGVSPDFITYASLLE 339
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
+V + N+ L L + FE + KLFD++ Q G+ PD +T++T+
Sbjct: 155 HVVLYNVTLKVLRESRDFEGAEKLFDEMLQRGVKPDNITFSTL 197
>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
Length = 384
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G++ S +Y++ I+ G+ G +ALE+Y+ + +V N+ ++ + G
Sbjct: 114 MKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGL 173
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E +L D++ G+ PD VTYNT+
Sbjct: 174 LEDMERLLDEMDTKGVPPDQVTYNTL 199
Score = 40.8 bits (94), Expect = 0.099, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + K +KA EI +T+ + N++ N++LS + + +LF+ +
Sbjct: 195 TYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENL 254
Query: 71 KQSGLTPDAVTYNTV 85
K G+ P+ VTY+ +
Sbjct: 255 KSKGVVPNIVTYSAM 269
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 38/76 (50%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y++ IK G +++ + D+ + N + N ++ R G F+ +L+L+
Sbjct: 87 NLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELY 146
Query: 68 DKIKQSGLTPDAVTYN 83
D++ G D TYN
Sbjct: 147 DEMDGVGCAKDVHTYN 162
>gi|297844618|ref|XP_002890190.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336032|gb|EFH66449.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 741
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+S IK G +A + + + E ++ +CNL++ R G+FE + +F
Sbjct: 415 LVTYTSLIKGFVDLGMVEEAFTVLSKVQSEGLAPDIVLCNLMIHTFTRLGRFEEARNVFT 474
Query: 69 KIKQSGLTPDAVTYNTVYQS 88
+K+ L PD T+ ++ S
Sbjct: 475 SLKKRKLVPDQYTFVSILSS 494
>gi|449455399|ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Cucumis sativus]
Length = 576
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G + + +Y+ I GK S A I++ + + K N+ +++ L R G
Sbjct: 251 MKRDGCQPTTDTYTMLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGL 310
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
E + ++F++++++G PD YN + +S
Sbjct: 311 CEKAEEIFEQMQEAGYEPDVYAYNALMES 339
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 40/81 (49%)
Query: 3 QHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFES 62
Q K +I ++++ + L + G KA EI+ + + + +V+ N ++ R G
Sbjct: 289 QRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYG 348
Query: 63 SLKLFDKIKQSGLTPDAVTYN 83
+ ++F ++ G PD +YN
Sbjct: 349 AAEIFSLMQHMGCEPDRASYN 369
>gi|297827821|ref|XP_002881793.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
gi|297327632|gb|EFH58052.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
Length = 822
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 42/78 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S S+Y++ I G +GN +ALE+ +TD ++ N++LS ++ +L F
Sbjct: 212 SRSTYNNLINACGSSGNWRQALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYF 271
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ +K + + PD T+N +
Sbjct: 272 ELMKGAKVRPDTTTFNII 289
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 41/83 (49%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + +++S + G ++ ++ E K N+ N ++ +G E++L
Sbjct: 317 RPDVVTFTSIMHLYSVRGEIENCRAVFEAMLAEGLKPNIVSYNALMGAYAVHGMSENALS 376
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
+F IK++G+ PD V+Y ++ S
Sbjct: 377 VFGDIKRNGIVPDVVSYTSLLNS 399
Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 40/77 (51%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ SY+S + G++ KA E++ + E K NV N ++ NG ++++F
Sbjct: 390 VVSYTSLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFR 449
Query: 69 KIKQSGLTPDAVTYNTV 85
+++Q G P+ V+ T+
Sbjct: 450 QMEQDGTKPNVVSVCTL 466
>gi|293334951|ref|NP_001170632.1| uncharacterized protein LOC100384682 [Zea mays]
gi|238006488|gb|ACR34279.1| unknown [Zea mays]
gi|413925463|gb|AFW65395.1| hypothetical protein ZEAMMB73_565010 [Zea mays]
Length = 462
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I ++G +++AL++++ + + + N ++ CL R+G E + ++F +
Sbjct: 84 TYNSLITGADRSGLTVRALDLFDEMLRSGVAPDSWSYNALMHCLFRSGHPEHAYRVFADM 143
Query: 71 KQSGLTPDAVTYNT----VYQSDHIT 92
G+ P A TYNT + ++ H+T
Sbjct: 144 ADRGVAPCATTYNTLLDGLLKAGHVT 169
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 33/77 (42%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y++ I L K+G A + + N ++ C R G+FE L+ F
Sbjct: 187 IVTYNTMINGLCKSGKVGYARMVLKELGRTEHAPNAVTYTTVMKCCFRYGRFEQGLETFL 246
Query: 69 KIKQSGLTPDAVTYNTV 85
+ + G DA Y TV
Sbjct: 247 SLLEGGYISDAFPYTTV 263
Score = 34.7 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY++ + L ++G+ A ++ + D N +L L++ G ++ ++F +
Sbjct: 119 SYNALMHCLFRSGHPEHAYRVFADMADRGVAPCATTYNTLLDGLLKAGHVTNAFRMFRYL 178
Query: 71 KQSGLTPDAVTYNTV 85
+++GL VTYNT+
Sbjct: 179 QRAGLPVGIVTYNTM 193
>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDE-SDKVNVFICNLILSCLVRNGK 59
MQQ T+ ++ + LGK A+EI+ +D V V+ N ++ RNG
Sbjct: 222 MQQWYATNARMVATILSVLGKANQEGIAVEIFAKAESVIADTVQVY--NAMMGVYARNGN 279
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
FE ++F+ +++ G PD V++NT+
Sbjct: 280 FEKVNEMFNLMRERGCEPDIVSFNTL 305
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 45/80 (56%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ I +Y++ I + N +A+ +++ + + +++ N ++S R G +
Sbjct: 333 RPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGFALKAEH 392
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LF+K+K +G +PDAVTYN++
Sbjct: 393 LFEKLKSNGFSPDAVTYNSL 412
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S + K GN+ K +I + + N I+ ++G+ + +L+L+ +
Sbjct: 408 TYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDM 467
Query: 71 KQSGLTPDAVTYNTV 85
K SG PDAVTY +
Sbjct: 468 KSSGRNPDAVTYTVL 482
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL--K 65
++ Y++ + +NGN K E++N + + + ++ N +++ V++ S L +
Sbjct: 263 TVQVYNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLINAKVKSCATVSGLAIE 322
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L D++ + GL PD +TYNT+
Sbjct: 323 LLDEVGKFGLRPDIITYNTL 342
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 41/80 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ +YS+ I K G ++A E +N + + K + +++L +R + + +
Sbjct: 508 KPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFFLRFNEIKKAAA 567
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
L+ ++ ++G TPD Y +
Sbjct: 568 LYQEMIEAGFTPDTGLYEVM 587
>gi|255660906|gb|ACU25622.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 484
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G + +I SY++ K + + G + A +N + E + N+++ +GK
Sbjct: 106 MEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGK 165
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E++ + F+ +K ++PD VTYNT+
Sbjct: 166 VETANRFFEDMKSREISPDVVTYNTI 191
>gi|2335106|gb|AAC02776.1| putative salt-inducible protein [Arabidopsis thaliana]
Length = 810
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 42/78 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S S+Y++ I G +GN +ALE+ +TD ++ N++LS ++ +L F
Sbjct: 212 SRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYF 271
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ +K + + PD T+N +
Sbjct: 272 ELMKGAKVRPDTTTFNII 289
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 40/77 (51%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ SY+ + G++ KA E++ + E K NV N ++ NG ++++F
Sbjct: 390 VVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFR 449
Query: 69 KIKQSGLTPDAVTYNTV 85
+++Q G+ P+ V+ T+
Sbjct: 450 QMEQDGIKPNVVSVCTL 466
Score = 34.3 bits (77), Expect = 8.5, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 38/83 (45%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + +++S + G ++ ++ E K N+ N ++ +G ++L
Sbjct: 317 RPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALS 376
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
+ IKQ+G+ PD V+Y + S
Sbjct: 377 VLGDIKQNGIIPDVVSYTCLLNS 399
>gi|414876958|tpg|DAA54089.1| TPA: hypothetical protein ZEAMMB73_851506 [Zea mays]
gi|414876959|tpg|DAA54090.1| TPA: hypothetical protein ZEAMMB73_851506 [Zea mays]
Length = 1090
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
++ HG S S+Y + L +G AL +++ +T+ +V+ IC+ I+S R GK
Sbjct: 124 IEDHGMVLSPSTYCGMVVLLCAHGEVDCALRVFDIMTNRGCQVDDRICSSIVSGFSRTGK 183
Query: 60 FESSLKLFDKIKQ--SGLTPDAVTYNTVYQS 88
+ L +DK+K+ SG P VT +V +
Sbjct: 184 AGAGLHFYDKVKRQFSGFDPGLVTLTSVVHA 214
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 2 QQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+Q G ++ YS + L K G KAL++ + E + N+ I N +LS L G
Sbjct: 714 EQSGFSVDLTMYSIVVDGLCKGGYLEKALDLCEGMKKEGFQPNIVIHNSVLSGLCHQGCL 773
Query: 61 ESSLKLFDKIKQSGLTPDAVTY 82
+ +LFD ++ S + P +TY
Sbjct: 774 TEAFRLFDYLENSKMLPTIITY 795
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 31/116 (26%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDES-------------------- 39
M+ G K SI +Y++ I L K G+ KA+EI + ++
Sbjct: 371 MENKGIKASIITYNAIINGLCKAGHCEKAVEISEGVAADNFTYSTLLHGYINRGDITGVM 430
Query: 40 ---DKV-------NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
D++ +V CN+++ L K + LF K+ + GL P+ +TY+T+
Sbjct: 431 AMKDRLEGSGISMDVVTCNVLIKALFMINKVNDAWSLFHKMPEIGLRPNTITYHTI 486
>gi|326507912|dbj|BAJ86699.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 44/81 (54%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +YS + GK+G + K LE Y + +S + + N ++ + G+ E L F
Sbjct: 150 SVKTYSCLLNCYGKHGLAYKGLEFYEKMKAKSIVPDKLVYNYLMILYQKAGQPEKILSTF 209
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
+++++SG++ D Y T+ +S
Sbjct: 210 EEMRESGISADKFAYFTLIES 230
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 9 ISSYSSYIKFLGKNGNSLKALE-IYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+ +YS+ I L K G +ALE +++ + + N N +++ L ++ E + KL
Sbjct: 113 VVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLL 172
Query: 68 DKIKQSGLTPDAVTYNTV 85
+++ G PD +TYNT+
Sbjct: 173 EEMASKGYVPDNITYNTI 190
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + L + G +A + ++S+ +V N +L L + GK + ++KLF +
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDV 245
Query: 71 KQSGLTPDAVTYNTV 85
G PD VTYN++
Sbjct: 246 IAKGYMPDTVTYNSI 260
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I L K+ N +A ++ + + + N ILS L R GK + + FD +
Sbjct: 151 AYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSM 210
Query: 71 KQSGLTPDAVTYN 83
G +PD V YN
Sbjct: 211 PSRGYSPDVVAYN 223
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I SYS + L K A +++ + + +V N+++ L + GK + + L D
Sbjct: 359 IVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLD 418
Query: 69 KIKQSGLTPDAVTYNTV 85
++ SG PD V YNT+
Sbjct: 419 QMTCSGCAPDYVAYNTL 435
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 37/74 (50%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+ I K G +A +Y + + +++ N +L+ + K + +++LF +
Sbjct: 46 YNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMA 105
Query: 72 QSGLTPDAVTYNTV 85
+ G PD VTY+T+
Sbjct: 106 EKGFEPDVVTYSTI 119
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK-L 66
SI +Y+S + K +A+E++ ++ ++ + +V + I+S L + GK +L+ L
Sbjct: 77 SIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEML 136
Query: 67 FDKIKQSGLTPDAVTYNTV 85
F K+ + G + + V YN +
Sbjct: 137 FHKMIERGCSANTVAYNAL 155
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+ + L K KA E+++++ D ++ +++L+ L + K + LFD
Sbjct: 324 VVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFD 383
Query: 69 KIKQSGLTPDAVTYNTV 85
++ + L PD VT+N +
Sbjct: 384 RMIERKLVPDVVTFNIL 400
>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 543
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 47/84 (55%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
+Q+ +++YS+ + L K+G +AL++++ +T + + N+F N ++ L +++
Sbjct: 159 EQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWK 218
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
+ L + + G+ PD T+N +
Sbjct: 219 EAAPLLANMMRKGIMPDVQTFNVI 242
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 42/77 (54%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
YS + + +G ALE+++ ++ + K++V N++++ L + G + + L K++
Sbjct: 414 YSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKME 473
Query: 72 QSGLTPDAVTYNTVYQS 88
++G PD TYN Q
Sbjct: 474 ENGCPPDECTYNVFVQG 490
>gi|240254086|ref|NP_173127.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806394|sp|Q3EDA9.2|PPR46_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g16830
gi|332191383|gb|AEE29504.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 608
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+S IK G +A + + + E ++ +CNL++ R G+FE + K+F
Sbjct: 282 LVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFT 341
Query: 69 KIKQSGLTPDAVTYNTVYQS 88
+++ L PD T+ ++ S
Sbjct: 342 SLEKRKLVPDQYTFASILSS 361
>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
Length = 1139
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ ++ + G+ KA ++++++ + ++ N+++ L + GK + ++ L KI
Sbjct: 725 TYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKI 783
Query: 71 KQSGLTPDAVTYNTV 85
+SG +PD ++Y+T+
Sbjct: 784 TESGFSPDCISYSTI 798
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M + G T + +SYS I L +NG+ +E++ + + N + +++ ++ K
Sbjct: 434 MVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKK 493
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
+ + +LFDK+ S + P+ VT+N + +
Sbjct: 494 MDEAARLFDKMIDSNVIPNEVTFNVMIE 521
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 42/83 (50%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
M Q SI S++ IK L K G +A+++ + IT+ + + I+ L + G
Sbjct: 749 MLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDI 808
Query: 61 ESSLKLFDKIKQSGLTPDAVTYN 83
+ +L++++ GL PD V YN
Sbjct: 809 NKAFELWNEMLYKGLKPDVVAYN 831
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SYS+ I L K G+ KA E++N + + K +V N+ + +G+ + +L ++ +
Sbjct: 794 SYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNM 853
Query: 71 KQSGLTPDAVTYNTV 85
+SG+ P+ TY +
Sbjct: 854 IRSGVQPNWDTYRAL 868
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I +Y++ + L KNG KA+ ++ + + ++ N+++ + + GK E LF
Sbjct: 260 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 319
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ G+ PD V YNT+
Sbjct: 320 CNLSLKGVKPDVVAYNTM 337
Score = 42.4 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M Q G + +Y+ I+ L + G+ A EI+ + + N+ N +L L +NGK
Sbjct: 217 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 276
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
E ++ +F+ +++S + P TYN + +
Sbjct: 277 LEKAMVVFEYLQRSKMEPTIYTYNIMIE 304
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G + ++ +YSS I L G A + + + + +VF + ++ V+ GK
Sbjct: 77 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 136
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ KL+D++ + + P VTY+++
Sbjct: 137 LVEAEKLYDEMVKRSIDPSIVTYSSL 162
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 44/81 (54%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I +Y+ I+ + K G +++ +++ + K +V N ++S R G E + LF
Sbjct: 295 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 354
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
++K+ G P++ YNT+ ++
Sbjct: 355 KEMKEDGTLPNSGCYNTLIRA 375
Score = 34.7 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 43/85 (50%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+ +H + +Y++ IK K + +E++ ++ N N+++ L + G
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + ++F ++ G+ P+ +TYNT+
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTL 267
>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ ++ + G+ KA ++++++ + ++ N+++ L + GK + ++ L KI
Sbjct: 748 TYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKI 806
Query: 71 KQSGLTPDAVTYNTV 85
+SG +PD ++Y+T+
Sbjct: 807 TESGFSPDCISYSTI 821
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M + G T + +SYS I L +NG+ +E++ + + N + +++ ++ K
Sbjct: 457 MVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKK 516
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
+ + +LFDK+ S + P+ VT+N + +
Sbjct: 517 MDEAARLFDKMIDSNVIPNEVTFNVMIE 544
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 42/83 (50%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
M Q SI S++ IK L K G +A+++ + IT+ + + I+ L + G
Sbjct: 772 MLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDI 831
Query: 61 ESSLKLFDKIKQSGLTPDAVTYN 83
+ +L++++ GL PD V YN
Sbjct: 832 NKAFELWNEMLYKGLKPDVVAYN 854
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SYS+ I L K G+ KA E++N + + K +V N+ + +G+ + +L ++ +
Sbjct: 817 SYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNM 876
Query: 71 KQSGLTPDAVTYNTV 85
+SG+ P+ TY +
Sbjct: 877 IRSGVQPNWDTYRAL 891
>gi|449444202|ref|XP_004139864.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Cucumis sativus]
gi|449502917|ref|XP_004161779.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Cucumis sativus]
Length = 532
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 40/77 (51%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y + I L K G AL+++ ++ + +V ICN I+ L + +L++F
Sbjct: 300 IYTYGTLINSLTKKGKLGTALKLFRAMWERGLTTDVVICNCIIDALCFKKRIPEALEIFK 359
Query: 69 KIKQSGLTPDAVTYNTV 85
++ + G + TYNT+
Sbjct: 360 EMNERGCAANVATYNTL 376
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 23 GNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTY 82
GN +A + I + + +++ +++ L + GK ++LKLF + + GLT D V
Sbjct: 279 GNVHEAKRFWREIIESKCEPDIYTYGTLINSLTKKGKLGTALKLFRAMWERGLTTDVVIC 338
Query: 83 NTV 85
N +
Sbjct: 339 NCI 341
>gi|42570531|ref|NP_850859.2| SNF1-like protein kinase [Arabidopsis thaliana]
gi|75160582|sp|Q8S9D1.1|PP395_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g21222; AltName: Full=SNF1-like protein kinase AtC401
gi|19071860|dbj|BAB85674.1| SNF1-like protein kinase [Arabidopsis thaliana]
gi|332005563|gb|AED92946.1| SNF1-like protein kinase [Arabidopsis thaliana]
Length = 831
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ S + + L + G +A I+N++ +E K ++ +++ L R F S L L
Sbjct: 319 VRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLIS 378
Query: 69 KIKQSGLTPDAVTYNTV 85
K++++GL PD + +N +
Sbjct: 379 KVEKNGLKPDTILFNAI 395
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 47/85 (55%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+++ K S+ +Y++ + L + + L + + + K + + N I++ +G
Sbjct: 346 IEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNL 405
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++K+F+K+K+SG P A T+NT+
Sbjct: 406 DQAMKIFEKMKESGCKPTASTFNTL 430
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNS-ITDESDKVNVFICNLILSCLVRNG 58
M++ G K + S++++ IK GK G ++ + + + DE + N CN+++
Sbjct: 415 MKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQR 474
Query: 59 KFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
K E + + K++ G+ PD VT+NT+ ++
Sbjct: 475 KIEEAWNIVYKMQSYGVKPDVVTFNTLAKA 504
>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 452
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YSS I L K+G A ++ N + + +V N +L L +N + + ++ L KI
Sbjct: 296 TYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKI 355
Query: 71 KQSGLTPDAVTY 82
K G+ PD TY
Sbjct: 356 KDQGIQPDIYTY 367
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 51/110 (46%), Gaps = 22/110 (20%)
Query: 1 MQQHGKTS-ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M G+ + + +Y+S + L KN KA+ + I D+ + +++ +++ L +NG+
Sbjct: 320 MHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGR 379
Query: 60 ---------------------FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
F+ +L L K++ +G TP+ VT+ + ++
Sbjct: 380 LKDAQEVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFEILIRA 429
>gi|224122684|ref|XP_002318900.1| predicted protein [Populus trichocarpa]
gi|222859573|gb|EEE97120.1| predicted protein [Populus trichocarpa]
Length = 109
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 44/83 (53%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ S +Y+ I GK S AL+++N + + + ++ +++ R G E + +
Sbjct: 22 QPSTDTYTLLINLHGKASQSYMALKLFNEMRSQKCRPDICTYTALVNAFAREGLCEKAEE 81
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
+F+++++ L PD TYN + ++
Sbjct: 82 IFEQMQEDKLEPDVYTYNALMEA 104
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 43/77 (55%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y I L K G A+E+ + + + ++ N IL+CL + + + +L +F+K+
Sbjct: 339 YDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLG 398
Query: 72 QSGLTPDAVTYNTVYQS 88
+ G +P+A +YN+++ +
Sbjct: 399 EVGCSPNASSYNSMFSA 415
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y+ I L G ALE N + E+ K V +++ + G + ++KL D
Sbjct: 161 IVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLD 220
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++ + L PD TYN++ +
Sbjct: 221 EMLEINLQPDMFTYNSIIR 239
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 42/78 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I+ + + G +A +I +SI+ + +V N++L L+ GK+E+ +L +
Sbjct: 233 TYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDM 292
Query: 71 KQSGLTPDAVTYNTVYQS 88
G + VTY+ + S
Sbjct: 293 VARGCEANVVTYSVLISS 310
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/87 (19%), Positives = 46/87 (52%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
++++ K ++ +Y+ I+ G +A+++ + + + + + ++F N I+ + R G
Sbjct: 188 LKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYV 247
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
+ + ++ I G PD +TYN + +
Sbjct: 248 DRAFQIISSISSKGYAPDVITYNILLR 274
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 39/80 (48%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y+ ++ L G E+ + + + NV ++++S + R+GK E + L
Sbjct: 266 VITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLK 325
Query: 69 KIKQSGLTPDAVTYNTVYQS 88
+K+ GL PD Y+ + +
Sbjct: 326 DMKKKGLKPDGYCYDPLIAA 345
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 10 SSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF-- 67
SSY+S L G+ ++AL + + D+ + N ++SCL R+G + +++L
Sbjct: 407 SSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVD 466
Query: 68 DKIKQSGLTPDAVTYNTV 85
+++ S P V+YN V
Sbjct: 467 MEMESSECKPSVVSYNIV 484
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 48 NLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
N I++ R + +S+ ++ D++K G +PD VTYN + S
Sbjct: 130 NAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGS 170
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 41/79 (51%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +++ IK G KA+ I+N + D K NV +++ L R GK + +++ F+
Sbjct: 394 ICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFN 453
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++ G+ PD Y+ + Q
Sbjct: 454 QMIDQGVAPDKYAYHCLIQ 472
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 36/73 (49%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I G +A+ ++ + +S +V N+++ L + GK + + +FD +
Sbjct: 291 TYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTM 350
Query: 71 KQSGLTPDAVTYN 83
G PD +YN
Sbjct: 351 AMKGQNPDVFSYN 363
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILS--CLVRNGKFESSLKLFDK 69
+SS I L K G + A I++ + + ++++ CLV GK E +L++FD
Sbjct: 502 FSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLV--GKMEKALRVFDA 559
Query: 70 IKQSGLTPDAVTYNTV 85
+ +G+ P+ V Y T+
Sbjct: 560 MVSAGIEPNDVVYGTL 575
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 40/73 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS ++ L KN +A+ ++ + + K+++ N +++ + + + E + LF I
Sbjct: 641 TYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASI 700
Query: 71 KQSGLTPDAVTYN 83
+SGL P VTY+
Sbjct: 701 SRSGLVPCVVTYS 713
>gi|19071826|dbj|BAB85657.1| PnC401 homologue [Arabidopsis thaliana]
Length = 831
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ S + + L + G +A I+N++ +E K ++ +++ L R F S L L
Sbjct: 319 VRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLIS 378
Query: 69 KIKQSGLTPDAVTYNTV 85
K++++GL PD + +N +
Sbjct: 379 KVEKNGLKPDTILFNAI 395
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 47/85 (55%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+++ K S+ +Y++ + L + + L + + + K + + N I++ +G
Sbjct: 346 IEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNL 405
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++K+F+K+K+SG P A T+NT+
Sbjct: 406 DQAMKIFEKMKESGCKPTASTFNTL 430
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNS-ITDESDKVNVFICNLILSCLVRNG 58
M++ G K + S++++ IK GK G ++ + + + DE + N CN+++
Sbjct: 415 MKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQR 474
Query: 59 KFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
K E + + K++ G+ PD VT+NT+ ++
Sbjct: 475 KIEEAWNIVYKMQSYGVKPDVVTFNTLAKA 504
>gi|357140650|ref|XP_003571877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Brachypodium distachyon]
Length = 753
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 40/70 (57%)
Query: 16 IKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGL 75
I+ L K G + KA ++ + + CN++++ L R G+ S++ + + ++ SG
Sbjct: 333 IRGLVKTGKANKARQVLEVMVLSGGIPDTITCNMLIAQLCRGGQLSSAMSVLEDMRYSGT 392
Query: 76 TPDAVTYNTV 85
+P+ +T+NT+
Sbjct: 393 SPNGITFNTL 402
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y++ + + K G +AL I + I ++ + N ++ L G+ + ++ LFD
Sbjct: 571 IVTYNTLLNAISKEGMVEEALVIAHFIRQNGWQLVLITYNTLIDALANKGEVKKAMVLFD 630
Query: 69 KIKQSGLTPDAVTYNTV 85
++ ++PD +TY ++
Sbjct: 631 EMASGRISPDDITYGSL 647
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 42/77 (54%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+++Y+ +I + K G+ +A+++ + + ++ N +L+ + + G E +L +
Sbjct: 536 VTAYNIFINYFCKYGHLDQAIDVLEKMVSDKCCPDIVTYNTLLNAISKEGMVEEALVIAH 595
Query: 69 KIKQSGLTPDAVTYNTV 85
I+Q+G +TYNT+
Sbjct: 596 FIRQNGWQLVLITYNTL 612
>gi|302821834|ref|XP_002992578.1| hypothetical protein SELMODRAFT_43484 [Selaginella moellendorffii]
gi|300139647|gb|EFJ06384.1| hypothetical protein SELMODRAFT_43484 [Selaginella moellendorffii]
Length = 427
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 40/80 (50%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ S +Y I LGK G L+A E+++ + N ++S L R G+ E +L+
Sbjct: 312 RPSFLTYWVIIDGLGKAGRGLEADEVFSDMIRGDVSPQTVTYNALISGLCRVGRVERALE 371
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LF ++ Q PDA TY +
Sbjct: 372 LFREMPQRECRPDAATYGAL 391
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFIC-NLILSCLVRNGK 59
MQ+ + S+YS+ I L + G A ++ + D+ DK+ C + L L R G+
Sbjct: 99 MQETCQPDSSTYSTMIYELSRQGRLDHATKVAQEMVDK-DKIPDMPCLGVALEILCRCGR 157
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ KL +K+ PDAV + V
Sbjct: 158 VSDAWKLLRMMKEKHFKPDAVPHTYV 183
>gi|29294052|gb|AAO73889.1| protein kinase family [Arabidopsis thaliana]
Length = 854
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ S + + L + G +A I+N++ +E K ++ +++ L R F S L L
Sbjct: 342 VRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLIS 401
Query: 69 KIKQSGLTPDAVTYNTV 85
K++++GL PD + +N +
Sbjct: 402 KVEKNGLKPDTILFNAI 418
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 47/85 (55%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+++ K S+ +Y++ + L + + L + + + K + + N I++ +G
Sbjct: 369 IEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNL 428
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++K+F+K+K+SG P A T+NT+
Sbjct: 429 DQAMKIFEKMKESGCKPTASTFNTL 453
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNS-ITDESDKVNVFICNLILSCLVRNG 58
M++ G K + S++++ IK GK G ++ + + + DE + N CN+++
Sbjct: 438 MKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQR 497
Query: 59 KFESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
K E + + K++ G+ PD VT+NT+ ++
Sbjct: 498 KIEEAWNIVYKMQSYGVKPDVVTFNTLAKA 527
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 43/78 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y++ + + G A + + D K N+ N +++ + + GK E + K+F
Sbjct: 184 NVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVF 243
Query: 68 DKIKQSGLTPDAVTYNTV 85
D++ + GL PD V+YNT+
Sbjct: 244 DEMMREGLAPDGVSYNTL 261
>gi|297814291|ref|XP_002875029.1| hypothetical protein ARALYDRAFT_912211 [Arabidopsis lyrata subsp.
lyrata]
gi|297320866|gb|EFH51288.1| hypothetical protein ARALYDRAFT_912211 [Arabidopsis lyrata subsp.
lyrata]
Length = 653
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 46/84 (54%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
Q+ + +Y++ + + K G +A + + ++ +V N+I++ R G E
Sbjct: 470 QEESGPDVYAYNALMSGMVKAGMIDEANLLLRKMEEKGCIADVNSHNIIMNGFARTGVPE 529
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTV 85
+++LF+ +K SGL PD +TYNT+
Sbjct: 530 RAIELFETMKHSGLKPDGITYNTL 553
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 1 MQQHGKTS-ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G + ++S++ + + G +A+E++ ++ K + N +L C G
Sbjct: 503 MEEKGCIADVNSHNIIMNGFARTGVPERAIELFETMKHSGLKPDGITYNTLLGCFAHAGM 562
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQSD 89
F+ + ++ ++K G DA+T++++ ++D
Sbjct: 563 FKEAARMMREMKDEGFVYDAITHSSILEAD 592
>gi|242092154|ref|XP_002436567.1| hypothetical protein SORBIDRAFT_10g004910 [Sorghum bicolor]
gi|241914790|gb|EER87934.1| hypothetical protein SORBIDRAFT_10g004910 [Sorghum bicolor]
Length = 492
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I Y I LGK KA E++ ++ DE N+ ++S R+G+F + L D
Sbjct: 141 IGIYIKLITMLGKCKKPEKAHELFQAMIDEGCAPNLESYTALVSAYSRSGRFHEAFNLLD 200
Query: 69 KIKQS-GLTPDAVTYNTVYQS 88
++K + G PD TY+ + +S
Sbjct: 201 RMKDTPGCQPDVKTYSILIKS 221
>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 628
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S S Y+ Y+ L KNG +AL+++ + + NV I N +++ + R+ K E + +LF
Sbjct: 455 SYSIYNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLEIAWELF 514
Query: 68 DKIKQSGLTPDAVTY 82
+++ L PD VTY
Sbjct: 515 NRLCNEALQPDVVTY 529
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ SYS I L K+G +A E + + ++ NV +L L ++E + +
Sbjct: 250 KPTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKR 309
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
LF ++ GL PD VT++ +
Sbjct: 310 LFIEMVDHGLLPDVVTFSVL 329
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/81 (20%), Positives = 48/81 (59%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
++++ ++S I + ++ A E++N + +E+ + +V +++ L + G+ + + L
Sbjct: 489 SNVAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYDL 548
Query: 67 FDKIKQSGLTPDAVTYNTVYQ 87
F ++++ G P+ VT+NT+ +
Sbjct: 549 FLEMEEKGCAPNVVTFNTLMR 569
>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 544
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
NVF CN+++ L + ES++K+ D++ G+ P+ VTY T+
Sbjct: 200 NVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTI 242
>gi|222624963|gb|EEE59095.1| hypothetical protein OsJ_10946 [Oryza sativa Japonica Group]
Length = 318
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 44/77 (57%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y S + + K G+ A ++Y+ + + K + CN++++ +G+ + +L +F+++
Sbjct: 172 AYCSLVAYYCKAGDFEMARKVYDEMLGKGLKESTVSCNILVTGFCTHGRVDEALGMFEEM 231
Query: 71 KQSGLTPDAVTYNTVYQ 87
+ G+ D +TYN + Q
Sbjct: 232 VKKGIEHDVITYNILIQ 248
>gi|218192883|gb|EEC75310.1| hypothetical protein OsI_11678 [Oryza sativa Indica Group]
Length = 473
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 44/77 (57%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y S + + K G+ A ++Y+ + + K + CN++++ +G+ + +L +F+++
Sbjct: 327 AYCSLVAYYCKAGDFEMARKVYDEMLGKGLKESTVSCNILVTGFCTHGRVDEALGMFEEM 386
Query: 71 KQSGLTPDAVTYNTVYQ 87
+ G+ D +TYN + Q
Sbjct: 387 VKKGIEHDVITYNILIQ 403
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 42/77 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I + G A +++N + D ++ N++L CL NGK E +L + + +
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Query: 71 KQSGLTPDAVTYNTVYQ 87
++S + D +TYN + Q
Sbjct: 421 QKSEMDVDIITYNIIIQ 437
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 37/74 (50%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
+++ I K GN L+A +Y + S NVF N +++ +G + +FD +
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316
Query: 72 QSGLTPDAVTYNTV 85
G PD VTYNT+
Sbjct: 317 SKGCFPDVVTYNTL 330
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y+ + L NG KAL + + V++ N+I+ L R K + + LF
Sbjct: 394 IVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFR 453
Query: 69 KIKQSGLTPDAVTYNTV 85
+ + G+ PDA+ Y T+
Sbjct: 454 SLTRKGVKPDAIAYITM 470
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
NV I N +++ L +N ++L++F +++ G+ DAVTYNT+
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTL 225
>gi|115453133|ref|NP_001050167.1| Os03g0363700 [Oryza sativa Japonica Group]
gi|108708311|gb|ABF96106.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113548638|dbj|BAF12081.1| Os03g0363700 [Oryza sativa Japonica Group]
Length = 564
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 44/77 (57%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y S + + K G+ A ++Y+ + + K + CN++++ +G+ + +L +F+++
Sbjct: 327 AYCSLVAYYCKAGDFEMARKVYDEMLGKGLKESTVSCNILVTGFCTHGRVDEALGMFEEM 386
Query: 71 KQSGLTPDAVTYNTVYQ 87
+ G+ D +TYN + Q
Sbjct: 387 VKKGIEHDVITYNILIQ 403
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 45/75 (60%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I L K G + KA+++ + + + K + + ++ L R GK + ++K F +
Sbjct: 451 TYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEF 510
Query: 71 KQSGLTPDAVTYNTV 85
++ G+ P+AVT+N++
Sbjct: 511 ERMGVRPNAVTFNSI 525
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y++ + L K+G A+EI N ++ + + N ++ L + GK ++KL D
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473
Query: 69 KIKQSGLTPDAVTYNTV 85
+++ L PD +TY+++
Sbjct: 474 EMRAKDLKPDTITYSSL 490
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ ++ L +G +A+E+ + + +V +++ R+ ++KL D
Sbjct: 204 VVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLD 263
Query: 69 KIKQSGLTPDAVTYNTV 85
+++ G TPD VTYN +
Sbjct: 264 EMRDRGCTPDVVTYNVL 280
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M +HG S SY+ + K +A+E + ++ N +L+ L ++GK
Sbjct: 370 MPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK 429
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E ++++ +++ G +P +TYNTV
Sbjct: 430 VEDAVEILNQLSSKGCSPVLITYNTV 455
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G T + +Y+ + + K G +A++ N + + NV N+IL + G+
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + KL + + G +P VT+N +
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNIL 350
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 39/78 (50%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +++ I FL + G +A++I + + N N +L + K + +++
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402
Query: 68 DKIKQSGLTPDAVTYNTV 85
+++ G PD VTYNT+
Sbjct: 403 ERMVSRGCYPDIVTYNTM 420
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M HG I ++ I+ + G + KA +I + +V N+++S + G+
Sbjct: 128 MVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGE 187
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
++L + D++ ++PD VTYNT+ +S
Sbjct: 188 INNALSVLDRMS---VSPDVVTYNTILRS 213
>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 554
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
M G + SY++ IK K G++ A +++ + + +V + + + G F
Sbjct: 317 MWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSF 376
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTVYQSDHI 91
+ KL D++ + GL+PD + Y T+ DH+
Sbjct: 377 NIAKKLLDQMTEMGLSPDCIFYTTII--DHL 405
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS +I L K N E+ + + + +++ N+ L L G+ + +L++F+KI
Sbjct: 81 TYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKI 140
Query: 71 KQSGLTPDAVTYNTV 85
++G PD VTY +
Sbjct: 141 VKNGRKPDVVTYTII 155
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 42/78 (53%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + S+Y++ I L + +S L ++ + + VNV + ++ R G+ +++L
Sbjct: 197 RPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALS 256
Query: 66 LFDKIKQSGLTPDAVTYN 83
L D++K + L PD V YN
Sbjct: 257 LLDEMKSNSLEPDVVLYN 274
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G ++ +++ I+ + G AL + + + S + +V + N+ + C + GK
Sbjct: 226 MQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGK 285
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + K F ++K +GL D VTY ++
Sbjct: 286 VDMAWKXFHEMKANGLVLDDVTYTSM 311
Score = 41.6 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ SY+ + LG+ G +AL+ + + ++ N+ N+++ L + GK E++L +
Sbjct: 374 SVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGKLETALVVR 432
Query: 68 DKIKQSGLTPDAVTYN 83
D +K +GL P+ +T N
Sbjct: 433 DAMKDAGLFPNVITVN 448
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+S I+ K G +IYN + ++ + N + C+ + G+ E LF +IK
Sbjct: 517 YTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIK 576
Query: 72 QSGLTPDAVTY 82
G PDA +Y
Sbjct: 577 NLGFIPDARSY 587
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 44/87 (50%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
M++ ++S+Y+ I L K G AL + +++ D NV N+++ L + +
Sbjct: 401 MKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRL 460
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
+ + +F+ + PDAVTY ++ +
Sbjct: 461 DDACSIFEGLDHKTCRPDAVTYCSLIE 487
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY+ I L K G + +A E++ ++ ++ ++ N ++ ++GK + +L +++
Sbjct: 586 SYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEM 645
Query: 71 KQSGLTPDAVTYNTV 85
K G P VTY +V
Sbjct: 646 KTKGHEPTVVTYGSV 660
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 35/74 (47%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
YSS I GK G +A I + + NV+ N +L LV+ + +L F +K
Sbjct: 692 YSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMK 751
Query: 72 QSGLTPDAVTYNTV 85
TP+ +TY+ +
Sbjct: 752 DLKCTPNYITYSIL 765
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 35/77 (45%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS I L K KA + + + K NVF ++S L + G + LF+K
Sbjct: 761 TYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKF 820
Query: 71 KQSGLTPDAVTYNTVYQ 87
K+ G D+ YN + +
Sbjct: 821 KEKGGVADSAIYNAIIE 837
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 42/78 (53%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + S+Y++ I L + +S L ++ + + VNV + ++ R G+ +++L
Sbjct: 197 RPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALS 256
Query: 66 LFDKIKQSGLTPDAVTYN 83
L D++K + L PD V YN
Sbjct: 257 LLDEMKSNSLEPDVVLYN 274
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G ++ +++ I+ + G AL + + + S + +V + N+ + C + GK
Sbjct: 226 MQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGK 285
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + K F ++K +GL D VTY ++
Sbjct: 286 VDMAWKFFHEMKANGLVLDDVTYTSM 311
Score = 41.6 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ SY+ + LG+ G +AL+ + + ++ N+ N+++ L + GK E++L +
Sbjct: 374 SVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGKLETALVVR 432
Query: 68 DKIKQSGLTPDAVTYN 83
D +K +GL P+ +T N
Sbjct: 433 DAMKDAGLFPNVITVN 448
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
Y+S I+ K G +IYN + ++ + N + C+ + G+ E LF +IK
Sbjct: 517 YTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIK 576
Query: 72 QSGLTPDAVTY 82
G PDA +Y
Sbjct: 577 NLGFIPDARSY 587
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 44/87 (50%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
M++ ++S+Y+ I L K G AL + +++ D NV N+++ L + +
Sbjct: 401 MKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRL 460
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
+ + +F+ + PDAVTY ++ +
Sbjct: 461 DDACSIFEGLDHKTCRPDAVTYCSLIE 487
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SY+ I L K G + +A E++ ++ ++ ++ N ++ ++GK + +L +++
Sbjct: 586 SYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEM 645
Query: 71 KQSGLTPDAVTYNTV 85
K G P VTY +V
Sbjct: 646 KTKGHEPTVVTYGSV 660
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 35/74 (47%)
Query: 12 YSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
YSS I GK G +A I + + NV+ N +L LV+ + +L F +K
Sbjct: 692 YSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMK 751
Query: 72 QSGLTPDAVTYNTV 85
TP+ +TY+ +
Sbjct: 752 DLKCTPNYITYSIL 765
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 35/77 (45%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS I L K KA + + + K NVF ++S L + G + LF+K
Sbjct: 761 TYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKF 820
Query: 71 KQSGLTPDAVTYNTVYQ 87
K+ G D+ YN + +
Sbjct: 821 KEKGGVADSAIYNAIIE 837
>gi|357165906|ref|XP_003580534.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Brachypodium distachyon]
Length = 775
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 45/85 (52%)
Query: 5 GKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSL 64
G+ S YS + L K+G A+ +Y + +V+ + ++ LVR GK ++ +
Sbjct: 285 GRASPGVYSVMVDVLAKSGRLDAAMGMYREMVAVGHRVSTSVSTAMVEGLVRAGKLDAGM 344
Query: 65 KLFDKIKQSGLTPDAVTYNTVYQSD 89
+L++++++ GL P Y V +++
Sbjct: 345 ELWEEMRRGGLRPSFGLYTMVVEAN 369
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 45/75 (60%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I L K G + KA+++ + + + K + + ++ L R GK + ++K F +
Sbjct: 451 TYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEF 510
Query: 71 KQSGLTPDAVTYNTV 85
++ G+ P+AVT+N++
Sbjct: 511 ERMGIRPNAVTFNSI 525
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y++ + L K+G A+EI N ++ + + N ++ L + GK ++KL D
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473
Query: 69 KIKQSGLTPDAVTYNTV 85
+++ L PD +TY+++
Sbjct: 474 EMRAKDLKPDTITYSSL 490
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ ++ L +G +A+E+ + + +V +++ R+ ++KL D
Sbjct: 204 VVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLD 263
Query: 69 KIKQSGLTPDAVTYNTV 85
+++ G TPD VTYN +
Sbjct: 264 EMRDRGCTPDVVTYNVL 280
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 1 MQQHGKTSIS-SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M QHG S SY+ + K +A+E + ++ N +L+ L ++GK
Sbjct: 370 MPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK 429
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E ++++ +++ G +P +TYNTV
Sbjct: 430 VEDAVEILNQLSSKGCSPVLITYNTV 455
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G T + +Y+ + + K G +A++ N + + NV N+IL + G+
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + KL + + G +P VT+N +
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNIL 350
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 39/78 (50%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +++ I FL + G +A++I + + N N +L + K + +++
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402
Query: 68 DKIKQSGLTPDAVTYNTV 85
+++ G PD VTYNT+
Sbjct: 403 ERMVSRGCYPDIVTYNTM 420
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M HG I ++ I+ + G + KA +I + +V N+++S + G+
Sbjct: 128 MVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGE 187
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
++L + D++ ++PD VTYNT+ +S
Sbjct: 188 INNALSVLDRMS---VSPDVVTYNTILRS 213
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 46/82 (56%)
Query: 7 TSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
++ +YS+ I G A++++N + E+ K +V+ N+++ ++GK +LKL
Sbjct: 260 PNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKL 319
Query: 67 FDKIKQSGLTPDAVTYNTVYQS 88
D++ G P+ VTY+++ +
Sbjct: 320 VDEMHDRGQPPNIVTYSSILDA 341
>gi|359485617|ref|XP_003633296.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g10330-like [Vitis vinifera]
Length = 531
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
++ I GK G A++I+N + + V N ++S L NG+ + +L LF+K+K
Sbjct: 275 TALIALYGKTGCLENAMKIFNGMVVKG----VCTWNAMISSLACNGREKQALDLFEKMKM 330
Query: 73 SGLTPDAVTYNTV 85
GL PD VT+ V
Sbjct: 331 QGLCPDEVTFVAV 343
>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ ++ + G+ KA ++++++ + ++ N+++ L + GK + ++ L KI
Sbjct: 725 TYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKI 783
Query: 71 KQSGLTPDAVTYNTV 85
+SG +PD ++Y+T+
Sbjct: 784 TESGFSPDCISYSTI 798
Score = 41.6 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M + G T + +SYS I L +NG+ +E++ + + N + +++ ++ K
Sbjct: 434 MVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKK 493
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
+ + +LFDK+ S + P+ VT+N + +
Sbjct: 494 MDEAARLFDKMIDSNVIPNEVTFNVMIE 521
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 42/83 (50%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
M Q SI S++ IK L K G +A+++ + IT+ + + I+ L + G
Sbjct: 749 MLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDI 808
Query: 61 ESSLKLFDKIKQSGLTPDAVTYN 83
+ +L++++ GL PD V YN
Sbjct: 809 NKAFELWNEMLYKGLKPDVVAYN 831
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
SYS+ I L K G+ KA E++N + + K +V N+ + +G+ + +L ++ +
Sbjct: 794 SYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNM 853
Query: 71 KQSGLTPDAVTYNTV 85
+SG+ P+ TY +
Sbjct: 854 IRSGVQPNWDTYRAL 868
>gi|30688764|ref|NP_850356.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75158748|sp|Q8RWS8.1|PP199_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g41720; AltName: Full=Protein EMBRYO DEFECTIVE 2654
gi|20268762|gb|AAM14084.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|21436141|gb|AAM51317.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330254931|gb|AEC10025.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 42/78 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S S+Y++ I G +GN +ALE+ +TD ++ N++LS ++ +L F
Sbjct: 212 SRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYF 271
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ +K + + PD T+N +
Sbjct: 272 ELMKGAKVRPDTTTFNII 289
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 40/77 (51%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ SY+ + G++ KA E++ + E K NV N ++ NG ++++F
Sbjct: 390 VVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFR 449
Query: 69 KIKQSGLTPDAVTYNTV 85
+++Q G+ P+ V+ T+
Sbjct: 450 QMEQDGIKPNVVSVCTL 466
Score = 34.3 bits (77), Expect = 9.3, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 38/83 (45%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + +++S + G ++ ++ E K N+ N ++ +G ++L
Sbjct: 317 RPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALS 376
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
+ IKQ+G+ PD V+Y + S
Sbjct: 377 VLGDIKQNGIIPDVVSYTCLLNS 399
>gi|302797815|ref|XP_002980668.1| hypothetical protein SELMODRAFT_113147 [Selaginella moellendorffii]
gi|300151674|gb|EFJ18319.1| hypothetical protein SELMODRAFT_113147 [Selaginella moellendorffii]
Length = 402
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQ 72
++ I K +S KA ++++ + D +VF+ N++++ ++G E SL LF +++
Sbjct: 122 TTIIHRYSKFSSSGKARQVFDKVRDP----DVFVYNVMVAAYAKDGLHEESLGLFQRMQM 177
Query: 73 SGLTPDAVTY 82
G+TPD +T+
Sbjct: 178 EGITPDKITF 187
>gi|297817888|ref|XP_002876827.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322665|gb|EFH53086.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 611
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 36/54 (66%)
Query: 32 YNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
Y+ T+ D N+ N ++S ++ NG+ E++++LF+++ GL PD+ T+N++
Sbjct: 284 YSVFTELKDTRNLISWNSVISGMMLNGQHETAVELFEQLDSEGLKPDSATWNSL 337
>gi|255661020|gb|ACU25679.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 376
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 43/75 (57%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS+ I L K+ KA+ + N + K N + N +++ LV + KFE ++++F ++
Sbjct: 131 AYSAMINGLCKDSKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGSSKFEDAIRVFQEM 190
Query: 71 KQSGLTPDAVTYNTV 85
+ +P +TYNT+
Sbjct: 191 GSTHCSPTIITYNTL 205
>gi|255660870|gb|ACU25604.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 476
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G + +I SY++ K + + G + +N + E + N+++ +GK
Sbjct: 98 MEELGVERTIKSYNALFKVILRRGRYMMGKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGK 157
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E++++ F+ +K ++PD VTYNT+
Sbjct: 158 VETAIRFFEDMKSREISPDVVTYNTM 183
>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
[Vitis vinifera]
gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 44/80 (55%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ +YSS + K+G S +ALE+ + + N+ + ++ L + GK + +++
Sbjct: 258 KPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVE 317
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+ D++K GL PDA Y +
Sbjct: 318 ILDRMKLQGLRPDAGLYGKI 337
Score = 34.3 bits (77), Expect = 9.7, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 8 SISSYSSYIKFLGKNGNSLKA-LEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKL 66
S++S + IK L KN ++ A L I+ + + + + +++ L R GK + +L
Sbjct: 154 SVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKEL 213
Query: 67 FDKIKQSGLTPDAVTYNTV 85
F +++ +P VTY ++
Sbjct: 214 FKEMETKACSPTVVTYTSL 232
>gi|147828617|emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
Length = 477
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 44/80 (55%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K ++ +YSS + K+G S +ALE+ + + N+ + ++ L + GK + +++
Sbjct: 258 KPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVE 317
Query: 66 LFDKIKQSGLTPDAVTYNTV 85
+ D++K GL PDA Y +
Sbjct: 318 ILDRMKLQGLRPDAGLYGKI 337
>gi|115466100|ref|NP_001056649.1| Os06g0125300 [Oryza sativa Japonica Group]
gi|6983867|dbj|BAA90802.1| salt-inducible protein-like [Oryza sativa Japonica Group]
gi|113594689|dbj|BAF18563.1| Os06g0125300 [Oryza sativa Japonica Group]
gi|125553869|gb|EAY99474.1| hypothetical protein OsI_21443 [Oryza sativa Indica Group]
gi|125595884|gb|EAZ35664.1| hypothetical protein OsJ_19951 [Oryza sativa Japonica Group]
Length = 535
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 43 NVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
N+ CN++L LV G +++LK+ D++ G+TPD VTY TV
Sbjct: 192 NLVSCNILLKGLVGIGDLDAALKVLDEMPGLGITPDVVTYTTV 234
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + S+Y+ I + + +ALE+ + + +V V + ++ L R G+ E +L
Sbjct: 179 RPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALA 238
Query: 66 LFDKIKQSGLTPDAVTYN 83
L D++K S L PD V YN
Sbjct: 239 LVDEVKGSCLEPDIVLYN 256
Score = 41.6 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G + + +++ ++ L + G AL + + + + ++ + N+ + C + G
Sbjct: 208 MQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGN 267
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + K F ++K GL PD V+Y ++
Sbjct: 268 VDMAWKFFHELKSQGLKPDDVSYTSM 293
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 34/74 (45%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y S I LGK GN A ++ ++ D N + ++ +G+ E K+F ++
Sbjct: 463 TYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEM 522
Query: 71 KQSGLTPDAVTYNT 84
+ G PD NT
Sbjct: 523 NRRGCQPDLTLLNT 536
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ S++S + LGK +AL ++ ++ +++ N N+I+ L GK E + +
Sbjct: 356 SVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEP-NSSTYNIIIDMLCMAGKVEEAYMIR 414
Query: 68 DKIKQSGLTPDAVTYN 83
D+++ +GL P+ +T N
Sbjct: 415 DEMEHAGLFPNLLTVN 430
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 41/82 (50%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
M++ + + S+Y+ I L G +A I + + N+ N+++ L + KF
Sbjct: 383 MKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKF 442
Query: 61 ESSLKLFDKIKQSGLTPDAVTY 82
E + ++F+ Q G P++VTY
Sbjct: 443 EPAYEMFETASQRGCNPNSVTY 464
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I G G A ++ + + + +V N IL+CL + K + +L LF+ +
Sbjct: 324 AYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAM 383
Query: 71 KQSGLTPDAVTYNTV 85
K+ P++ TYN +
Sbjct: 384 KKDA-EPNSSTYNII 397
Score = 34.3 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M + G T ++ +++S + L K +AL + S+ + N + +++++ L R K
Sbjct: 697 MMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQK 756
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + + ++++ GL P+ VTY T+
Sbjct: 757 YNKAFVFWQEMQKQGLVPNVVTYTTM 782
>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 737
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 21 KNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAV 80
+ G A+++ + + N+ ICN + LV K E +L+ ++++ G+TP+ V
Sbjct: 183 RAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVV 242
Query: 81 TYNT-------VYQSDH 90
TYN +YQ +H
Sbjct: 243 TYNCLIKGYCDLYQVEH 259
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M +HG K + SY++ + L ++GNSL+A E+ N+ ++ N ++++ L R GK
Sbjct: 408 MYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGK 467
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+ + ++ G P V N + +S
Sbjct: 468 LSEACDVVREMLTKGFFPTPVEINLLIKS 496
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ + L K+G++ +ALE + +V+ + I++ G+ + + ++ +++
Sbjct: 314 TYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEM 373
Query: 71 KQSGLTPDAVTYNTV 85
G +PD VTY V
Sbjct: 374 ITKGCSPDVVTYTAV 388
>gi|168000535|ref|XP_001752971.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695670|gb|EDQ82012.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 391
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESD-KVNVFICNLILSCLVRNG 58
M++ G K + S+++ I G+N + KAL+++ + +D + + N ++S R G
Sbjct: 42 MEKRGIKKTAVSFNALIHSYGRNNEAHKALQLFEDMKATNDCQPTLVTYNTLISMYSRMG 101
Query: 59 KFESSLKLFDKIKQSGLTPDAVTYNTV 85
E KLF K++G +PD TYN +
Sbjct: 102 ATEEMKKLFLDCKEAGFSPDRHTYNAL 128
>gi|449524124|ref|XP_004169073.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11900-like [Cucumis sativus]
Length = 363
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 27 KALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVY 86
KA +I+N + S +++ N+IL + R G+ + L +F +K+ G+ PD V+YNT+
Sbjct: 197 KAFQIFNQMKCLSCTPDLYTYNIILDMVGRAGRVDEILHIFVSMKEEGIAPDIVSYNTLI 256
Query: 87 QS 88
S
Sbjct: 257 NS 258
Score = 34.7 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 42/78 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ + +G+ G + L I+ S+ +E ++ N +++ L + G+ + S+ F ++
Sbjct: 216 TYNIILDMVGRAGRVDEILHIFVSMKEEGIAPDIVSYNTLINSLRKVGRLDISVIYFREM 275
Query: 71 KQSGLTPDAVTYNTVYQS 88
G+ PD +TY + +S
Sbjct: 276 VAMGIEPDLLTYTALIES 293
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I +Y++ + L KNG KA+ ++ + + ++ N+++ + + GK E LF
Sbjct: 465 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ G+ PD V YNT+
Sbjct: 525 CNLSLKGVKPDVVAYNTM 542
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M Q G + +Y+ I+ L + G+ A EI+ + + N+ N +L L +NGK
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
E ++ +F+ +++S + P TYN + +
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIE 509
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ G + ++ +YSS I L G A + + + + +VF + ++ V+ GK
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ KL+D++ + + P VTY+++
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSL 367
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 44/81 (54%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I +Y+ I+ + K G +++ +++ + K +V N ++S R G E + LF
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559
Query: 68 DKIKQSGLTPDAVTYNTVYQS 88
++K+ G P++ YNT+ ++
Sbjct: 560 KEMKEDGTLPNSGCYNTLIRA 580
Score = 34.3 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 43/85 (50%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+ +H + +Y++ IK K + +E++ ++ N N+++ L + G
Sbjct: 388 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 447
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
+ + ++F ++ G+ P+ +TYNT+
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTL 472
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 41 KVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
K +VF N+++ L + G E + LF ++K++G TPD VTYN++
Sbjct: 252 KRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSL 296
Score = 38.9 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 40/75 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y + I L K+G +A+ + +++ + NV + ++ L +N FE + KLFD++
Sbjct: 572 TYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEM 631
Query: 71 KQSGLTPDAVTYNTV 85
G+ PD + Y +
Sbjct: 632 LDKGMMPDKIAYTAL 646
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G T I +Y+S I GK G + + I+ + D +V N +++C + +
Sbjct: 281 MKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFER 340
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNT 84
+ + ++K +GL P+ VTY+T
Sbjct: 341 MPKAFEFLHEMKANGLKPNVVTYST 365
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 37/75 (49%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I K GN +AL++ I K+NV +L L G+ + + ++F +
Sbjct: 397 TYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAM 456
Query: 71 KQSGLTPDAVTYNTV 85
+G+ P+ TY +
Sbjct: 457 LNAGVAPNQETYTAL 471
Score = 34.7 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ +G K ++ +YS++I K G +A++ + + + N F ++ + G
Sbjct: 351 MKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGN 410
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+LKL ++I Q+G+ + VTY +
Sbjct: 411 LAEALKLVEEILQAGIKLNVVTYTAL 436
>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
Length = 1365
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 42/78 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I N A+ I+ + + +++ N ++S R G+ E++ +F +
Sbjct: 198 TYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIM 257
Query: 71 KQSGLTPDAVTYNTVYQS 88
++ G TPDAVTYN+V +
Sbjct: 258 QEQGFTPDAVTYNSVLHA 275
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
+QQHG + S+YS+ + + GN +A +++ + N N +L R GK
Sbjct: 672 LQQHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNATCANYVLEAFGRAGK 731
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+ + F ++ + G++P++ T+ ++ +
Sbjct: 732 AKEISEFFQRLPEMGISPNSRTFVVIFHA 760
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G I +Y++ I G+ G A I+ + ++ + N +L R+G+
Sbjct: 222 MQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGR 281
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E ++ ++ + + D +TYNT+
Sbjct: 282 IEEVERIRGMMRDARCSSDEITYNTM 307
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G SI + + + + + A E+ I ++++ I N ++S + G
Sbjct: 777 MKEAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDIDIYNHMISLYSKLGS 836
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+ ++ +F +++ G +PDA T+NT+
Sbjct: 837 YRNAALVFKGMQEIGCSPDATTFNTL 862
>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
Length = 1354
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 42/78 (53%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I N A+ I+ + + +++ N ++S R G+ E++ +F +
Sbjct: 187 TYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIM 246
Query: 71 KQSGLTPDAVTYNTVYQS 88
++ G TPDAVTYN+V +
Sbjct: 247 QEQGFTPDAVTYNSVLHA 264
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
+Q+HG + S+YS+ + + GN +A +++ + N N +L R GK
Sbjct: 661 LQRHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNAACANYVLEAFGRAGK 720
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+ + + ++ + G+TP++ T+ ++ +
Sbjct: 721 AKELSEFYQRLPEMGITPNSRTFVVIFHA 749
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
MQ+ G I +Y++ I G+ G A I+ + ++ + N +L R+G+
Sbjct: 211 MQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGR 270
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
E ++ ++ + + D +TYNT+
Sbjct: 271 IEEVERIRGMMRDARCSSDEITYNTM 296
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 41 KVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
K +VF N+++ L + G E + LF ++K++G TPD VTYN++
Sbjct: 53 KRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSL 97
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G T I +Y+S I GK G + + I+ + D +V N +++C + +
Sbjct: 82 MKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFER 141
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNT 84
+ + ++K +GL P+ VTY+T
Sbjct: 142 MPKAFEFLHEMKANGLKPNVVTYST 166
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 37/75 (49%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I K GN +AL++ I K+NV +L L G+ + + ++F +
Sbjct: 198 TYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAM 257
Query: 71 KQSGLTPDAVTYNTV 85
+G+ P+ TY +
Sbjct: 258 LNAGVAPNQETYTAL 272
Score = 34.7 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 1 MQQHG-KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M+ +G K ++ +YS++I K G +A++ + + + N F ++ + G
Sbjct: 152 MKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGN 211
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTV 85
+LKL ++I Q+G+ + VTY +
Sbjct: 212 LAEALKLVEEILQAGIKLNVVTYTAL 237
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 46/85 (54%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+Q+ ++ +Y++ L K G+ A E+ + + + ++N+F N +++ L + G
Sbjct: 452 VQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNL 511
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
E +++ + ++GL PD TY T+
Sbjct: 512 EQAMRTMIDMDEAGLKPDVYTYTTI 536
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 46/85 (54%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+Q+ ++ +Y++ L K G+ A E+ + + + ++N+F N +++ L + G
Sbjct: 452 VQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNL 511
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
E +++ + ++GL PD TY T+
Sbjct: 512 EQAMRTMIDMDEAGLKPDVYTYTTI 536
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 46/85 (54%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
+Q+ ++ +Y++ L K G+ A E+ + + + ++N+F N +++ L + G
Sbjct: 452 VQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNL 511
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTV 85
E +++ + ++GL PD TY T+
Sbjct: 512 EQAMRTMIDMDEAGLKPDVYTYTTI 536
>gi|124360267|gb|ABN08280.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 349
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 19 LGKNGNSLKALEIYNSITDESDK-VNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTP 77
K+G AL I+ + ++++ +++ N++L L R G+ + L +F +K++G P
Sbjct: 170 FAKSGQKDSALAIFEHLREQNNSCLDLITYNIVLDILGRKGRVDEMLDMFASLKETGFVP 229
Query: 78 DAVTYNTV 85
D ++YNT+
Sbjct: 230 DTISYNTL 237
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 46/78 (58%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
K I +++S +K L K+ KA E++ ++ S +V N+++ R G+ E ++K
Sbjct: 224 KPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMK 283
Query: 66 LFDKIKQSGLTPDAVTYN 83
+ +++Q G+TPD V+++
Sbjct: 284 FYKEMQQRGVTPDVVSFS 301
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 39/77 (50%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +Y++ + L K L A E+ N + + ++ ++ R+G FE +L+LFD
Sbjct: 367 VVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFD 426
Query: 69 KIKQSGLTPDAVTYNTV 85
+ L PD V YN++
Sbjct: 427 TLLHQRLRPDVVAYNSL 443
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 1 MQQHGKT-SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGK 59
M++ G T + ++++ I ++GN KAL++++++ + + +V N ++ + R G
Sbjct: 393 MKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGD 452
Query: 60 FESSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+ +L+D + + P+ VTY+ + S
Sbjct: 453 LAKANELWDDMHAREIFPNHVTYSILIDS 481
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 1 MQQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKF 60
MQ + + ++++ I K N A ++N + E + + N+I++ G
Sbjct: 534 MQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNM 593
Query: 61 ESSLKLFDKIKQSGLTPDAVTYNTVYQSDHIT 92
E + ++F K+ SG+ PD TY ++ H+T
Sbjct: 594 EEAGRVFKKMGASGIEPDRYTYMSLING-HVT 624
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 40/78 (51%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
+I +Y+S IK ++GN K + + ++ ++ N ++ ++ + +F
Sbjct: 506 NIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVF 565
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ +++ + PDAVTYN +
Sbjct: 566 NIMEKEMVQPDAVTYNMI 583
>gi|227202654|dbj|BAH56800.1| AT2G41720 [Arabidopsis thaliana]
Length = 815
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 42/78 (53%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S S+Y++ I G +GN +ALE+ +TD ++ N++LS ++ +L F
Sbjct: 212 SRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYF 271
Query: 68 DKIKQSGLTPDAVTYNTV 85
+ +K + + PD T+N +
Sbjct: 272 ELMKGAKVRPDTTTFNII 289
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 40/77 (51%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ SY+ + G++ KA E++ + E K NV N ++ NG ++++F
Sbjct: 390 VVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFR 449
Query: 69 KIKQSGLTPDAVTYNTV 85
+++Q G+ P+ V+ T+
Sbjct: 450 QMEQDGIKPNVVSVCTL 466
Score = 34.3 bits (77), Expect = 9.9, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 38/83 (45%)
Query: 6 KTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLK 65
+ + +++S + G ++ ++ E K N+ N ++ +G ++L
Sbjct: 317 RPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALS 376
Query: 66 LFDKIKQSGLTPDAVTYNTVYQS 88
+ IKQ+G+ PD V+Y + S
Sbjct: 377 VLGDIKQNGIIPDVVSYTCLLNS 399
>gi|225427240|ref|XP_002278451.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic [Vitis vinifera]
Length = 723
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 42/76 (55%)
Query: 3 QHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFES 62
+H + SY++ + G GN +A+++++ +++ ++NV C + CL R + +
Sbjct: 439 EHCRPDSWSYTAMLNIYGSGGNVDRAMQLFDEMSELGVQINVMGCTCLSQCLGRARRIDD 498
Query: 63 SLKLFDKIKQSGLTPD 78
+K+F+ + G+ PD
Sbjct: 499 LVKVFEVSLERGVKPD 514
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 33/56 (58%)
Query: 30 EIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTV 85
E+ N + +++ + I++C R F+ ++K F+++ ++GL PD VTY+ +
Sbjct: 220 ELANEMISTGVELDNITYSTIITCAKRCNLFDKAVKWFERMYKTGLMPDEVTYSAI 275
>gi|168019305|ref|XP_001762185.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686589|gb|EDQ72977.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 237
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 47/84 (55%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y++ I + G +A ++ I+++ +V N ++S ++ G+ + +L+ +
Sbjct: 15 IVTYNTMIHICSRAGRVREAKSLFKKISEKGLVPDVASYNTLISMFIKRGEKQKALQYYQ 74
Query: 69 KIKQSGLTPDAVTYNTVYQSDHIT 92
K+K +G+TPD VT+ + + +T
Sbjct: 75 KMKTAGVTPDTVTFRILLKHSMLT 98
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 40/72 (55%)
Query: 14 SYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQS 73
S+I + G A+E+YN + ++ + + F N+++ L GK + +L L +++ S
Sbjct: 284 SFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEIS 343
Query: 74 GLTPDAVTYNTV 85
G + +TYNT+
Sbjct: 344 GCARNVITYNTL 355
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 39/75 (52%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+ I L G +AL + + NV N ++ +N K E + ++FD++
Sbjct: 316 TYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQM 375
Query: 71 KQSGLTPDAVTYNTV 85
+ GL+ ++VTYNT+
Sbjct: 376 EIQGLSRNSVTYNTL 390
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 41/78 (52%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +Y++ I KN +A EI++ + + N N ++ L ++ + + + +L
Sbjct: 348 NVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLM 407
Query: 68 DKIKQSGLTPDAVTYNTV 85
D++ GL PD TYN++
Sbjct: 408 DQMIMEGLKPDKFTYNSM 425
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 40/79 (50%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
I +Y + I L K G A + SI + + N ++ L + + + +++LF
Sbjct: 454 IVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFR 513
Query: 69 KIKQSGLTPDAVTYNTVYQ 87
++++ G TPDA TY V++
Sbjct: 514 EMEEKGNTPDAFTYKIVFR 532
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 43/78 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ Y++ I+ K GN +A ++ I +V ++++ L RNGK + +F
Sbjct: 564 NVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIF 623
Query: 68 DKIKQSGLTPDAVTYNTV 85
++++ GL P+A TYN++
Sbjct: 624 SELQEKGLLPNAFTYNSL 641
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I K GN KA ++ + + ++ N+++ L + G+ E + LFD I
Sbjct: 637 TYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDI 696
Query: 71 KQSGLTPDAVTY 82
+ GLTP+ VTY
Sbjct: 697 EGRGLTPNCVTY 708
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +YS I L +NG +A I++ + ++ N F N ++S + G + + +L +
Sbjct: 600 VQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLE 659
Query: 69 KIKQSGLTPDAVTYNTV 85
++ G+ PD VTYN +
Sbjct: 660 EMCIKGINPDIVTYNIL 676
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 43/77 (55%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I + G+ +A I + + + N+ I N +L+ + + GK E +L++ ++
Sbjct: 322 TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM 381
Query: 71 KQSGLTPDAVTYNTVYQ 87
+ G+ PD+ TY+ + +
Sbjct: 382 MEKGVEPDSQTYSLLIE 398
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 37/78 (47%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +YS I L + GN I + K N + +++ + G+ E S +
Sbjct: 424 TVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMIL 483
Query: 68 DKIKQSGLTPDAVTYNTV 85
+++++ G+ PD YN++
Sbjct: 484 ERMREQGILPDVFCYNSL 501
>gi|356519383|ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 614
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 28 ALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKIKQSGLTPDAVTYNTVYQ 87
A I+N I D S +FI NL++ V++G F S++ LF ++++ G+ PD TY V +
Sbjct: 61 ANRIFNYIHDPS----LFIYNLMIKAFVKSGSFRSAISLFQQLREHGVWPDNYTYPYVLK 116
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 13 SSYIKFLGKNGNSLKALEIYNSITD-ESDKVNVFICNLILSCLVRNGKFESSLKLFDKIK 71
++ I+ K G K+ EI+N + + ++ IC L + NGK +L+LF ++
Sbjct: 380 TALIEMYAKCGCIEKSFEIFNGLKEKDTTSWTSIICGLAM-----NGKPSEALELFKAMQ 434
Query: 72 QSGLTPDAVTYNTV 85
GL PD +T+ V
Sbjct: 435 TCGLKPDDITFVAV 448
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 43/78 (55%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ Y++ I+ K GN +A ++ I +V ++++ L RNGK + +F
Sbjct: 555 NVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIF 614
Query: 68 DKIKQSGLTPDAVTYNTV 85
++++ GL P+A TYN++
Sbjct: 615 SELQEKGLLPNAFTYNSL 632
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y+S I K GN KA ++ + + ++ N+++ L + G+ E + LFD I
Sbjct: 628 TYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDI 687
Query: 71 KQSGLTPDAVTY 82
+ GLTP+ VTY
Sbjct: 688 EGRGLTPNCVTY 699
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 41/77 (53%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+ +YS I L +NG +A I++ + ++ N F N ++S + G + + +L +
Sbjct: 591 VQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLE 650
Query: 69 KIKQSGLTPDAVTYNTV 85
++ G+ PD VTYN +
Sbjct: 651 EMCIKGINPDIVTYNIL 667
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 43/77 (55%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+Y++ I + G+ +A I + + + N+ I N +L+ + + GK E +L++ ++
Sbjct: 313 TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM 372
Query: 71 KQSGLTPDAVTYNTVYQ 87
+ G+ PD+ TY+ + +
Sbjct: 373 MEKGVEPDSQTYSLLIE 389
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 37/78 (47%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
++ +YS I L + GN I + K N + +++ + G+ E S +
Sbjct: 415 TVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMIL 474
Query: 68 DKIKQSGLTPDAVTYNTV 85
+++++ G+ PD YN++
Sbjct: 475 ERMREQGILPDVFCYNSL 492
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 46/87 (52%)
Query: 2 QQHGKTSISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFE 61
+Q K ++ +Y+S I L NG +A + + + + K N+ N +L+ +N +
Sbjct: 264 RQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVK 323
Query: 62 SSLKLFDKIKQSGLTPDAVTYNTVYQS 88
+ +LFD + + G+TP+ TYN + +
Sbjct: 324 QAGELFDDMPKQGITPNVTTYNILIDA 350
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 43/77 (55%)
Query: 9 ISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFD 68
+S+Y+ I L + G+ A + + + + K ++ N+++ L G+ + +L+L D
Sbjct: 376 VSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLD 435
Query: 69 KIKQSGLTPDAVTYNTV 85
++ + GL P +TYNT+
Sbjct: 436 EMCRKGLKPSQLTYNTM 452
>gi|255661002|gb|ACU25670.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 376
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 41/75 (54%)
Query: 11 SYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLFDKI 70
+YS+ I L K N KA+ + N + K N + N +++ LV KFE ++++F ++
Sbjct: 131 AYSAMINGLCKEANLDKAVXVLNDMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREM 190
Query: 71 KQSGLTPDAVTYNTV 85
+P +TYNT+
Sbjct: 191 GXVRCSPTIITYNTL 205
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 45/80 (56%)
Query: 8 SISSYSSYIKFLGKNGNSLKALEIYNSITDESDKVNVFICNLILSCLVRNGKFESSLKLF 67
S+ +YS +K L + +AL+++N + + K +V + N+++ L GK + +L L+
Sbjct: 233 SVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQLALSLY 292
Query: 68 DKIKQSGLTPDAVTYNTVYQ 87
+ + P+ VT+NT+ +
Sbjct: 293 FDMNRWKCAPNLVTHNTLME 312
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.132 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,414,782,742
Number of Sequences: 23463169
Number of extensions: 47022389
Number of successful extensions: 175452
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3872
Number of HSP's successfully gapped in prelim test: 941
Number of HSP's that attempted gapping in prelim test: 148359
Number of HSP's gapped (non-prelim): 27192
length of query: 94
length of database: 8,064,228,071
effective HSP length: 64
effective length of query: 30
effective length of database: 6,562,585,255
effective search space: 196877557650
effective search space used: 196877557650
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)