Query 034451
Match_columns 94
No_of_seqs 114 out of 433
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 04:15:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034451.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034451hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nxu_A Cytochrome P450 3A4; al 97.4 7.6E-05 2.6E-09 55.8 3.2 41 36-94 8-48 (485)
2 3s79_A Cytochrome P450 19A1; o 96.1 0.0018 6.3E-08 48.4 1.8 42 39-94 42-83 (503)
3 3k9v_A 1,25-dihydroxyvitamin D 93.8 0.063 2.2E-06 39.6 4.1 48 26-94 16-63 (482)
4 1r9o_A Cytochrome P450 2C9; mo 93.2 0.041 1.4E-06 41.0 2.2 42 36-94 3-46 (477)
5 1po5_A Cytochrome P450 2B4; ox 92.6 0.063 2.2E-06 40.0 2.6 35 43-94 11-45 (476)
6 3tbg_A Cytochrome P450 2D6; mo 92.1 0.089 3E-06 38.7 2.8 41 37-94 3-45 (479)
7 3e6i_A CYPIIE1, P450-J, cytoch 91.3 0.1 3.6E-06 38.4 2.4 34 44-94 12-45 (476)
8 2fdv_A Cytochrome P450 2A6; CY 91.0 0.11 3.9E-06 38.6 2.4 41 37-94 3-45 (476)
9 2cd8_A Cytochrome P450 monooxy 90.9 0.07 2.4E-06 39.9 1.2 35 41-94 25-60 (436)
10 2ij2_A Cytochrome P450 BM3; mo 90.0 0.16 5.5E-06 38.0 2.4 36 42-94 3-38 (470)
11 2hi4_A Cytochrome P450 1A2; CY 89.8 0.14 4.9E-06 38.3 2.1 34 43-94 17-50 (495)
12 3swz_A Steroid 17-alpha-hydrox 89.1 0.074 2.5E-06 39.7 -0.0 34 45-94 11-44 (494)
13 3ld6_A Lanosterol 14-alpha dem 88.4 0.37 1.3E-05 35.6 3.4 34 43-94 9-46 (461)
14 3pm0_A Cypib1, cytochrome P450 87.6 0.18 6.2E-06 37.4 1.3 34 43-94 10-43 (507)
15 3czh_A Cytochrome P450 2R1; vi 87.5 0.38 1.3E-05 36.0 3.0 36 44-94 14-49 (481)
16 3dan_A Cytochrome P450 74A2; A 86.3 0.22 7.6E-06 36.7 1.1 39 43-94 10-49 (473)
17 2ve3_A Putative cytochrome P45 84.9 0.92 3.2E-05 33.4 3.9 33 43-94 13-45 (444)
18 3i3k_A Lanosterol 14-alpha dem 84.2 0.71 2.4E-05 33.9 3.1 32 45-94 14-46 (461)
19 3b98_A Prostaglandin I2 syntha 83.6 0.3 1E-05 36.0 0.7 34 43-94 19-53 (475)
20 3gw9_A Sterol 14alpha-demethyl 82.4 0.93 3.2E-05 32.9 3.0 32 44-93 5-37 (450)
21 3b6h_A Prostacyclin synthase; 81.7 0.37 1.3E-05 35.9 0.6 34 43-94 19-53 (498)
22 3dsk_A Cytochrome P450 74A, ch 81.0 0.57 2E-05 34.8 1.4 39 43-94 29-67 (495)
23 2cib_A Cytochrome P450 51; hem 80.1 0.75 2.6E-05 34.1 1.8 35 42-94 4-39 (455)
24 3v8d_A Cholesterol 7-alpha-mon 76.4 0.61 2.1E-05 34.7 0.4 33 44-94 15-48 (491)
25 3dax_A Cytochrome P450 7A1; ch 74.5 0.74 2.5E-05 34.0 0.4 32 45-94 16-48 (491)
26 1izo_A P450bsbeta, cytochrome 61.8 5.2 0.00018 29.1 2.7 28 48-93 6-33 (417)
27 3qz1_A Steroid 21-hydroxylase; 61.7 3.8 0.00013 30.2 2.0 12 83-94 47-58 (496)
28 3awm_A Fatty acid alpha-hydrox 55.3 9.4 0.00032 27.6 3.1 30 44-94 4-34 (415)
29 3n9y_A Cholesterol SIDE-chain 52.6 5.7 0.00019 29.1 1.6 38 43-94 10-47 (487)
30 3dbg_A Putative cytochrome P45 51.1 2.2 7.7E-05 31.4 -0.8 18 44-61 25-42 (467)
31 3me7_A Putative uncharacterize 32.4 47 0.0016 21.0 3.5 34 31-64 77-111 (170)
32 1n97_A CYP175A1; electron tran 26.4 7 0.00024 28.2 -1.6 32 45-94 2-33 (389)
33 4hde_A SCO1/SENC family lipopr 23.5 78 0.0027 20.1 3.3 35 31-65 82-117 (170)
34 1wij_A Ethylene-insensitive3-l 22.9 13 0.00046 24.6 -0.6 25 29-54 48-75 (140)
35 1xrs_A D-lysine 5,6-aminomutas 22.5 84 0.0029 25.0 3.7 44 24-68 127-175 (516)
36 1u57_A GAG polyprotein, HIV-1; 22.2 23 0.00077 18.8 0.3 9 42-50 9-17 (48)
37 2o5h_A Hypothetical protein; a 21.6 54 0.0019 21.6 2.2 35 35-69 59-94 (136)
38 2wwb_A Protein transport prote 21.2 2.9E+02 0.01 21.4 7.5 30 22-51 372-406 (476)
No 1
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=97.43 E-value=7.6e-05 Score=55.79 Aligned_cols=41 Identities=15% Similarity=0.269 Sum_probs=32.1
Q ss_pred HHHHHHcCCCCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCCcccccchHHHHHHHhhCC
Q 034451 36 EKFLRQQGLKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYGM 94 (94)
Q Consensus 36 ~~~lr~QGI~GP~~~~l~Gn~~e~~~~~~~a~~~~~~~shdi~prv~P~~~~w~k~YGk 94 (94)
..+++++|++||++.+++||+.++. .....++.+|.++||+
T Consensus 8 ~~~~k~~~~PGP~~~PliGn~~~~~------------------~~~~~~~~~~~~~yG~ 48 (485)
T 3nxu_A 8 HGLFKKLGIPGPTPLPFLGNILSYH------------------KGFCMFDMECHKKYGK 48 (485)
T ss_dssp TTHHHHHTCCCCCCBTTTBTGGGGG------------------GCHHHHHHHHHHHHCS
T ss_pred chHHhhCCCCCCCCcCeecCcHHhh------------------cChHHHHHHHHHHcCC
Confidence 3689999999999999999985442 2223467899999995
No 2
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=96.15 E-value=0.0018 Score=48.43 Aligned_cols=42 Identities=17% Similarity=0.141 Sum_probs=28.4
Q ss_pred HHHcCCCCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCCcccccchHHHHHHHhhCC
Q 034451 39 LRQQGLKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYGM 94 (94)
Q Consensus 39 lr~QGI~GP~~~~l~Gn~~e~~~~~~~a~~~~~~~shdi~prv~P~~~~w~k~YGk 94 (94)
.++++++||++-+++||+.++.+... + .....+.+|.++||+
T Consensus 42 ~~~~~pPGP~~~P~iGnl~~~~~~~~-----------~---~~~~~~~~~~~~yG~ 83 (503)
T 3s79_A 42 EGTSSIPGPGYCMGIGPLISHGRFLW-----------M---GIGSACNYYNRVYGE 83 (503)
T ss_dssp ---CCCCSCCCCSSSHHHHHHHHHHH-----------H---CHHHHHHHHHHHSCS
T ss_pred hccCCCCCCCCCceeeehhccccccc-----------c---chhHHHHHHHHHhCC
Confidence 34579999999999999988754211 0 111256889999995
No 3
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=93.78 E-value=0.063 Score=39.59 Aligned_cols=48 Identities=21% Similarity=0.106 Sum_probs=31.0
Q ss_pred HHHHhchHHHHHHHHHcCCCCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCCcccccchHHHHHHHhhCC
Q 034451 26 NWVWLRPKKLEKFLRQQGLKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYGM 94 (94)
Q Consensus 26 ~~~w~~P~rl~~~lr~QGI~GP~~~~l~Gn~~e~~~~~~~a~~~~~~~shdi~prv~P~~~~w~k~YGk 94 (94)
.....+|.+ .++||++.+++||+.++.. ..-.....-++.+|.++||+
T Consensus 16 ~~~~~~pl~--------~~PGP~~~p~iG~~~~~~~-------------~~~~~~~~~~~~~l~~~YG~ 63 (482)
T 3k9v_A 16 TDGETRNVT--------DLPGPTNWPLLGSLLEIFW-------------KGGLKKQHDTLAEYHKKYGQ 63 (482)
T ss_dssp ---CCEEGG--------GCCCSCCCTTTBTHHHHHH-------------TTCGGGHHHHHHHHHHHHCS
T ss_pred cccccCCCC--------CCCCCCCCCccccHHHHhc-------------cCCcccHHHHHHHHHHHcCC
Confidence 444556643 4999999999999988754 00011222467899999995
No 4
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=93.19 E-value=0.041 Score=41.01 Aligned_cols=42 Identities=17% Similarity=0.153 Sum_probs=20.5
Q ss_pred HHHHHHc--CCCCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCCcccccchHHHHHHHhhCC
Q 034451 36 EKFLRQQ--GLKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYGM 94 (94)
Q Consensus 36 ~~~lr~Q--GI~GP~~~~l~Gn~~e~~~~~~~a~~~~~~~shdi~prv~P~~~~w~k~YGk 94 (94)
.+++++. .++||++.+++||+.++. .....+++.+|.++||+
T Consensus 3 ~~~~~~~~~~pPgP~~~p~iG~~~~~~-----------------~~~~~~~~~~l~~~yG~ 46 (477)
T 1r9o_A 3 KKTSSGRGKLPPGPTPLPVIGNILQIG-----------------IKDISKSLTNLSKVYGP 46 (477)
T ss_dssp ------CCBCCCCSSSCC-----CCBC-----------------HHHHHHHHHHHHHHHCS
T ss_pred cccccCCCCCCCCCCCCceeccHhhcC-----------------CCChHHHHHHHHHHhCC
Confidence 3556666 578999999999984431 11123567888888984
No 5
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=92.64 E-value=0.063 Score=40.02 Aligned_cols=35 Identities=20% Similarity=0.159 Sum_probs=25.1
Q ss_pred CCCCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCCcccccchHHHHHHHhhCC
Q 034451 43 GLKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYGM 94 (94)
Q Consensus 43 GI~GP~~~~l~Gn~~e~~~~~~~a~~~~~~~shdi~prv~P~~~~w~k~YGk 94 (94)
.++||++.+++||+.++. ......++.+|.++||+
T Consensus 11 ~pPgP~~~p~iG~~~~~~-----------------~~~~~~~~~~l~~~yG~ 45 (476)
T 1po5_A 11 LPPGPSPLPVLGNLLQMD-----------------RKGLLRSFLRLREKYGD 45 (476)
T ss_dssp CCCCSCCBTTTBTGGGCC-----------------TTCHHHHHHHHHHHHCS
T ss_pred CCcCCCCCCccccHHhcc-----------------CCcHHHHHHHHHHHhCC
Confidence 578999999999985441 11123577899999985
No 6
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=92.12 E-value=0.089 Score=38.74 Aligned_cols=41 Identities=22% Similarity=0.234 Sum_probs=23.7
Q ss_pred HHHHHcC-CC-CCCCcCCCCCHHHHHHHHHHhhcCCCCCCCCcccccchHHHHHHHhhCC
Q 034451 37 KFLRQQG-LK-GNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYGM 94 (94)
Q Consensus 37 ~~lr~QG-I~-GP~~~~l~Gn~~e~~~~~~~a~~~~~~~shdi~prv~P~~~~w~k~YGk 94 (94)
|.-+++| ++ ||++-+++||+.++.. .+ ..-.+.+|.++||+
T Consensus 3 ~~~ss~~kLPPGP~~lP~iGn~~~~~~-------------~~----~~~~~~~~~~kYG~ 45 (479)
T 3tbg_A 3 KKTSSKGKLPPGPLPLPGLGNLLHVDF-------------QN----TPYCFDQLRRRFGD 45 (479)
T ss_dssp ------CCCCCCSCCBTTTBTGGGCCT-------------TS----HHHHHHHHHHHHCS
T ss_pred CCCCCCCCCCCCCCCcCcccchHhhcC-------------CC----HHHHHHHHHHHhCC
Confidence 3445556 54 9999999999844311 11 11246899999995
No 7
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=91.32 E-value=0.1 Score=38.42 Aligned_cols=34 Identities=15% Similarity=0.184 Sum_probs=24.7
Q ss_pred CCCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCCcccccchHHHHHHHhhCC
Q 034451 44 LKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYGM 94 (94)
Q Consensus 44 I~GP~~~~l~Gn~~e~~~~~~~a~~~~~~~shdi~prv~P~~~~w~k~YGk 94 (94)
.+||++.+++||+.++. ......++.+|.++||+
T Consensus 12 pPgP~~~PliG~~~~~~-----------------~~~~~~~~~~~~~~yG~ 45 (476)
T 3e6i_A 12 PPGPFPLPIIGNLFQLE-----------------LKNIPKSFTRLAQRFGP 45 (476)
T ss_dssp CCCCCCBTTTBTGGGCC-----------------TTCHHHHHHHHHHHHCS
T ss_pred CcCCCCcccccChhhhc-----------------cccHhHHHHHHHHHhCC
Confidence 68999999999985431 11222467999999995
No 8
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=91.00 E-value=0.11 Score=38.61 Aligned_cols=41 Identities=17% Similarity=0.202 Sum_probs=25.2
Q ss_pred HHHHHc-C-CCCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCCcccccchHHHHHHHhhCC
Q 034451 37 KFLRQQ-G-LKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYGM 94 (94)
Q Consensus 37 ~~lr~Q-G-I~GP~~~~l~Gn~~e~~~~~~~a~~~~~~~shdi~prv~P~~~~w~k~YGk 94 (94)
++|++. + ++||++.+++||+.++.. .| ...++.+|.++||+
T Consensus 3 ~~~~~~~~~pPgP~~~p~iG~~~~~~~-------------~~----~~~~~~~l~~~yG~ 45 (476)
T 2fdv_A 3 KKTSSKGKLPPGPTPLPFIGNYLQLNT-------------EQ----MYNSLMKISERYGP 45 (476)
T ss_dssp -----CCBCCCCCCCBTTTBTGGGCCT-------------TB----HHHHHHHHHHHHCS
T ss_pred ccccccCCCCCCCCCCcccccHhhcCC-------------cc----hHHHHHHHHHHhCC
Confidence 455555 4 589999999999854310 11 23577899999985
No 9
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=90.92 E-value=0.07 Score=39.94 Aligned_cols=35 Identities=26% Similarity=0.291 Sum_probs=17.6
Q ss_pred HcCCCCCCCcCCCCCHH-HHHHHHHHhhcCCCCCCCCcccccchHHHHHHHhhCC
Q 034451 41 QQGLKGNSYRLLFGDLK-ENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYGM 94 (94)
Q Consensus 41 ~QGI~GP~~~~l~Gn~~-e~~~~~~~a~~~~~~~shdi~prv~P~~~~w~k~YGk 94 (94)
++|++||++.+++||.. ++.+ | -.++++++ ++||+
T Consensus 25 ~~~~PGP~~~p~lG~~~~~~~~--------------~----p~~~~~~l-~~yGp 60 (436)
T 2cd8_A 25 QQGTTASPPVLDLGALGQDFAA--------------D----PYPTYARL-RAEGP 60 (436)
T ss_dssp ---------CCBHHHHHHHHHH--------------C----CHHHHHHH-HTTCS
T ss_pred ccCCCCCCccccCCCCCccccc--------------C----hHHHHHHH-HHhCC
Confidence 57899999999999986 3322 2 13577888 88985
No 10
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=89.99 E-value=0.16 Score=37.98 Aligned_cols=36 Identities=14% Similarity=0.086 Sum_probs=25.5
Q ss_pred cCCCCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCCcccccchHHHHHHHhhCC
Q 034451 42 QGLKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYGM 94 (94)
Q Consensus 42 QGI~GP~~~~l~Gn~~e~~~~~~~a~~~~~~~shdi~prv~P~~~~w~k~YGk 94 (94)
.+++||++.+++||+.++.. . .....+.+|.++||+
T Consensus 3 ~~~PGP~~~p~iG~l~~~~~-------------~----~~~~~~~~~~~~yG~ 38 (470)
T 2ij2_A 3 KEMPQPKTFGELKNLPLLNT-------------D----KPVQALMKIADELGE 38 (470)
T ss_dssp CCCCCCCCCGGGTTGGGGCS-------------S----CHHHHHHHHHHHHCS
T ss_pred CCCCCCCCCCccccHHHHhc-------------c----cchHHHHHHHHHhCC
Confidence 47899999999999855411 1 112367889999995
No 11
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=89.82 E-value=0.14 Score=38.32 Aligned_cols=34 Identities=18% Similarity=0.112 Sum_probs=25.3
Q ss_pred CCCCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCCcccccchHHHHHHHhhCC
Q 034451 43 GLKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYGM 94 (94)
Q Consensus 43 GI~GP~~~~l~Gn~~e~~~~~~~a~~~~~~~shdi~prv~P~~~~w~k~YGk 94 (94)
+++||++.+++||+.++.+ | ...++.+|.++||+
T Consensus 17 ~~PgP~~~p~~G~~~~~~~--------------~----~~~~~~~l~~~yG~ 50 (495)
T 2hi4_A 17 SPPEPWGWPLLGHVLTLGK--------------N----PHLALSRMSQRYGD 50 (495)
T ss_dssp CCCCCCCBTTTBTHHHHTT--------------C----HHHHHHHHHHHHCS
T ss_pred CCCCCCCCcceeeHHhcCc--------------c----HHHHHHHHHHHhCC
Confidence 4599999999999976622 1 12467899999995
No 12
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=89.08 E-value=0.074 Score=39.67 Aligned_cols=34 Identities=24% Similarity=0.139 Sum_probs=21.1
Q ss_pred CCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCCcccccchHHHHHHHhhCC
Q 034451 45 KGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYGM 94 (94)
Q Consensus 45 ~GP~~~~l~Gn~~e~~~~~~~a~~~~~~~shdi~prv~P~~~~w~k~YGk 94 (94)
+||++-+++||+.++.+ + ....-.+.+|.++||+
T Consensus 11 PgP~~lPliGnl~~l~~-------------~---~~~~~~~~~~~~kYG~ 44 (494)
T 3swz_A 11 KSLLSLPLVGSLPFLPR-------------H---GHMHNNFFKLQKKYGP 44 (494)
T ss_dssp -CCBCCCEEEEESSCTT-------------S---SCHHHHHHHTHHHHCS
T ss_pred CCCCCCCeEcchHHhCC-------------C---CchhHHHHHHHHHcCC
Confidence 56666899999833211 0 1122367899999995
No 13
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=88.39 E-value=0.37 Score=35.63 Aligned_cols=34 Identities=24% Similarity=0.352 Sum_probs=23.3
Q ss_pred CCCCCCC----cCCCCCHHHHHHHHHHhhcCCCCCCCCcccccchHHHHHHHhhCC
Q 034451 43 GLKGNSY----RLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYGM 94 (94)
Q Consensus 43 GI~GP~~----~~l~Gn~~e~~~~~~~a~~~~~~~shdi~prv~P~~~~w~k~YGk 94 (94)
|.++||. -+++||+.++.+ | | ..++.+|.++||+
T Consensus 9 g~~~PP~~~~~lP~iG~~~~~~~--------------~--~--~~~~~~~~~kYG~ 46 (461)
T 3ld6_A 9 GVKSPPYIFSPIPFLGHAIAFGK--------------S--P--IEFLENAYEKYGP 46 (461)
T ss_dssp -CCCCCBCCCSSTTTBTHHHHHH--------------C--H--HHHHHHHHHHHCS
T ss_pred CCCCCCCCCCCcCeeeeHHHhhh--------------C--H--HHHHHHHHHHhCC
Confidence 6666653 357899988765 2 1 2478999999995
No 14
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=87.57 E-value=0.18 Score=37.43 Aligned_cols=34 Identities=18% Similarity=0.165 Sum_probs=10.7
Q ss_pred CCCCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCCcccccchHHHHHHHhhCC
Q 034451 43 GLKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYGM 94 (94)
Q Consensus 43 GI~GP~~~~l~Gn~~e~~~~~~~a~~~~~~~shdi~prv~P~~~~w~k~YGk 94 (94)
-.+||++.+++||+.++.+ | ...++.+|.++||+
T Consensus 10 ~pPgP~~~P~iG~~~~~~~--------------~----~~~~~~~~~~~yG~ 43 (507)
T 3pm0_A 10 KPPGPFAWPLIGNAAAVGQ--------------A----AHLSFARLARRYGD 43 (507)
T ss_dssp ------------------C--------------C----HHHHHHHHHHHHCS
T ss_pred CCcCCCCCCeeCchhhcCc--------------c----HHHHHHHHHHHhCC
Confidence 4789999999999866521 1 12367999999995
No 15
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=87.46 E-value=0.38 Score=35.95 Aligned_cols=36 Identities=14% Similarity=0.170 Sum_probs=26.2
Q ss_pred CCCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCCcccccchHHHHHHHhhCC
Q 034451 44 LKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYGM 94 (94)
Q Consensus 44 I~GP~~~~l~Gn~~e~~~~~~~a~~~~~~~shdi~prv~P~~~~w~k~YGk 94 (94)
++||++.+++||+.++.. .+ ....+++.+|.++||+
T Consensus 14 pPgP~~~p~~G~~~~~~~-------------~~--~~~~~~~~~l~~~yG~ 49 (481)
T 3czh_A 14 PPGPPGLPFIGNIYSLAA-------------SS--ELPHVYMRKQSQVYGE 49 (481)
T ss_dssp CCCCCCBTTTBHHHHHHH-------------CS--SCHHHHHHHHHHHHCS
T ss_pred CCCCCCCcccccHhhcCc-------------cc--CcHHHHHHHHHHHhCC
Confidence 589999999999987744 11 0123578899999995
No 16
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=86.28 E-value=0.22 Score=36.67 Aligned_cols=39 Identities=10% Similarity=0.136 Sum_probs=28.1
Q ss_pred CCCCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCCccc-ccchHHHHHHHhhCC
Q 034451 43 GLKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAI-RVNPFLHKLVNDYGM 94 (94)
Q Consensus 43 GI~GP~~~~l~Gn~~e~~~~~~~a~~~~~~~shdi~p-rv~P~~~~w~k~YGk 94 (94)
.|+||.+-+++||+.++.+- .... ...+++.+|.++||+
T Consensus 10 ~iPGp~g~P~iG~~~~~~~~-------------~~~~g~~~~~~~~~~~kyG~ 49 (473)
T 3dan_A 10 EIPGSYGIPFFQPIKDRLEY-------------FYGTGGRDEYFRSRMQKYQS 49 (473)
T ss_dssp CCCCCCCSTTHHHHHHHHHH-------------HHSTTHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCcchhhHHHHHHH-------------HHhhcCchHHHHhHHHHhCC
Confidence 68999988999999877541 1111 223688999999995
No 17
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=84.94 E-value=0.92 Score=33.44 Aligned_cols=33 Identities=15% Similarity=0.015 Sum_probs=25.7
Q ss_pred CCCCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCCcccccchHHHHHHHhhCC
Q 034451 43 GLKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYGM 94 (94)
Q Consensus 43 GI~GP~~~~l~Gn~~e~~~~~~~a~~~~~~~shdi~prv~P~~~~w~k~YGk 94 (94)
.++||++.+++||..++.+ | |. ++.+|.++||+
T Consensus 13 ~pPgp~~~P~iG~~~~~~~--------------~--~~---~~~~~~~~yg~ 45 (444)
T 2ve3_A 13 IPPGDFGLPWLGETLNFLN--------------D--GD---FGKKRQQQFGP 45 (444)
T ss_dssp CCCCCCCBTTTBTHHHHHH--------------C--TT---HHHHHHHHHCS
T ss_pred CCCCCCCCCccccHHHHhc--------------C--cH---HHHHHHHHcCC
Confidence 5799999999999987754 2 22 56789999985
No 18
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=84.24 E-value=0.71 Score=33.94 Aligned_cols=32 Identities=19% Similarity=0.084 Sum_probs=22.9
Q ss_pred CC-CCCcCCCCCHHHHHHHHHHhhcCCCCCCCCcccccchHHHHHHHhhCC
Q 034451 45 KG-NSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYGM 94 (94)
Q Consensus 45 ~G-P~~~~l~Gn~~e~~~~~~~a~~~~~~~shdi~prv~P~~~~w~k~YGk 94 (94)
+| |++-+++||+.++.+ | | ..++.+|.++||+
T Consensus 14 Pg~P~~lP~iG~l~~~~~--------------~--~--~~~~~~~~~~yG~ 46 (461)
T 3i3k_A 14 PYIFSPIPFLGHAIAFGK--------------S--P--IEFLENAYEKYGP 46 (461)
T ss_dssp CBCCCSSTTTBTHHHHHH--------------C--H--HHHHHHHHHHHCS
T ss_pred CCCCCCCCccccHHhhcc--------------C--H--HHHHHHHHHHhCC
Confidence 45 555688999988754 1 1 2478899999995
No 19
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=83.60 E-value=0.3 Score=36.02 Aligned_cols=34 Identities=15% Similarity=0.072 Sum_probs=25.8
Q ss_pred CCCCCCC-cCCCCCHHHHHHHHHHhhcCCCCCCCCcccccchHHHHHHHhhCC
Q 034451 43 GLKGNSY-RLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYGM 94 (94)
Q Consensus 43 GI~GP~~-~~l~Gn~~e~~~~~~~a~~~~~~~shdi~prv~P~~~~w~k~YGk 94 (94)
-.+||++ -+++||+.++.+ | | .+++.+|.++||+
T Consensus 19 ~pPgp~~~~P~iG~~~~~~~--------------~--~--~~~~~~l~~~yG~ 53 (475)
T 3b98_A 19 EPPLDKGMIPWLGHALEFGK--------------D--A--AKFLTRMKEKHGD 53 (475)
T ss_dssp CCCEECCSSTTTBTHHHHHH--------------C--H--HHHHHHHHHHHCS
T ss_pred CCCCCCCCcchHHhHHHHhh--------------C--H--HHHHHHHHHHhCC
Confidence 4689988 689999987743 2 1 3578999999995
No 20
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=82.45 E-value=0.93 Score=32.89 Aligned_cols=32 Identities=6% Similarity=-0.002 Sum_probs=23.2
Q ss_pred CCCCCC-cCCCCCHHHHHHHHHHhhcCCCCCCCCcccccchHHHHHHHhhC
Q 034451 44 LKGNSY-RLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYG 93 (94)
Q Consensus 44 I~GP~~-~~l~Gn~~e~~~~~~~a~~~~~~~shdi~prv~P~~~~w~k~YG 93 (94)
-+|||+ -+++||+.++.+ | + ..++.+|.++||
T Consensus 5 PPg~p~~~P~iG~~~~~~~--------------~--~--~~~~~~~~~~yG 37 (450)
T 3gw9_A 5 PPVYPVTVPILGHIIQFGK--------------S--P--LGFMQECKRQLK 37 (450)
T ss_dssp CCBCCCCSTTTBTHHHHHH--------------C--H--HHHHHHHHHHHT
T ss_pred CCCCCCCcchhccHHHHcc--------------C--H--HHHHHHHHHHhC
Confidence 468776 678999988754 1 1 136799999999
No 21
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=81.71 E-value=0.37 Score=35.89 Aligned_cols=34 Identities=12% Similarity=0.020 Sum_probs=25.3
Q ss_pred CCCCCCC-cCCCCCHHHHHHHHHHhhcCCCCCCCCcccccchHHHHHHHhhCC
Q 034451 43 GLKGNSY-RLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYGM 94 (94)
Q Consensus 43 GI~GP~~-~~l~Gn~~e~~~~~~~a~~~~~~~shdi~prv~P~~~~w~k~YGk 94 (94)
-.+||++ -+++||+.++.+ | + ..++.+|.++||+
T Consensus 19 ~PPgp~~~~P~iG~~~~~~~--------------~--~--~~~~~~l~~kYG~ 53 (498)
T 3b6h_A 19 EPPLDLGSIPWLGYALDFGK--------------D--A--ASFLTRMKEKHGD 53 (498)
T ss_dssp CCCEECCSSTTTBTHHHHHH--------------C--H--HHHHHHHHHHHCS
T ss_pred CCCCCCCCCcchhhHHHhcc--------------C--H--HHHHHHHHHHcCC
Confidence 3689988 588999977743 1 1 2478999999995
No 22
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=80.95 E-value=0.57 Score=34.79 Aligned_cols=39 Identities=15% Similarity=0.224 Sum_probs=27.9
Q ss_pred CCCCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCCcccccchHHHHHHHhhCC
Q 034451 43 GLKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYGM 94 (94)
Q Consensus 43 GI~GP~~~~l~Gn~~e~~~~~~~a~~~~~~~shdi~prv~P~~~~w~k~YGk 94 (94)
-++||++-+++||+.++.+-.. ...-..++.++.++||+
T Consensus 29 ~pPGp~g~P~iG~~~~~~~~~~-------------~~~~~~f~~~~~~kyG~ 67 (495)
T 3dsk_A 29 NIPGNYGLPIVGPIKDRWDYFY-------------DQGAEEFFKSRIRKYNS 67 (495)
T ss_dssp CCCCCCCSTTHHHHHHHHHHHT-------------TSCHHHHHHHHHHHHTC
T ss_pred CCCCCCCCCccchHHHHHHHHH-------------hcCcHHHHHHHHHHhCC
Confidence 5889988899999988754110 11223588999999995
No 23
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=80.12 E-value=0.75 Score=34.05 Aligned_cols=35 Identities=14% Similarity=0.159 Sum_probs=24.3
Q ss_pred cCCCC-CCCcCCCCCHHHHHHHHHHhhcCCCCCCCCcccccchHHHHHHHhhCC
Q 034451 42 QGLKG-NSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYGM 94 (94)
Q Consensus 42 QGI~G-P~~~~l~Gn~~e~~~~~~~a~~~~~~~shdi~prv~P~~~~w~k~YGk 94 (94)
...+| |++.+++||..++.+ | | ..++.+|.++||+
T Consensus 4 ~~PPg~p~~~P~iG~~~~~~~--------------~--~--~~~~~~l~~~yG~ 39 (455)
T 2cib_A 4 VALPRVSGGHDEHGHLEEFRT--------------D--P--IGLMQRVRDELGD 39 (455)
T ss_dssp -CCCBCSCCCBTTBTHHHHTT--------------C--H--HHHHHHHHHHHCS
T ss_pred CCCCCCCCCCCCccCHHHHhh--------------C--h--HHHHHHHHHHcCC
Confidence 34577 667889999977632 2 1 2577899999984
No 24
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=76.45 E-value=0.61 Score=34.66 Aligned_cols=33 Identities=12% Similarity=-0.078 Sum_probs=24.3
Q ss_pred CCCCCCc-CCCCCHHHHHHHHHHhhcCCCCCCCCcccccchHHHHHHHhhCC
Q 034451 44 LKGNSYR-LLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYGM 94 (94)
Q Consensus 44 I~GP~~~-~l~Gn~~e~~~~~~~a~~~~~~~shdi~prv~P~~~~w~k~YGk 94 (94)
-+||++. +++||+.++ ...-.+++.+|.++||+
T Consensus 15 PPgp~~~lPliG~~~~~------------------~~~p~~~~~~l~~~yGp 48 (491)
T 3v8d_A 15 PPLENGLIPYLGCALQF------------------GANPLEFLRANQRKHGH 48 (491)
T ss_dssp CCEEEEEESSTTTTGGG------------------TCCHHHHHHHHHHHHCS
T ss_pred CCCCCCCcceeccHHHH------------------hcCHHHHHHHHHHHcCC
Confidence 5788884 899998554 22334688999999995
No 25
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=74.47 E-value=0.74 Score=34.00 Aligned_cols=32 Identities=16% Similarity=-0.024 Sum_probs=20.9
Q ss_pred CCCCC-cCCCCCHHHHHHHHHHhhcCCCCCCCCcccccchHHHHHHHhhCC
Q 034451 45 KGNSY-RLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYGM 94 (94)
Q Consensus 45 ~GP~~-~~l~Gn~~e~~~~~~~a~~~~~~~shdi~prv~P~~~~w~k~YGk 94 (94)
+||++ -+++||+.++.+ | ...++.+|.++||+
T Consensus 16 Pgp~~~~P~iG~~~~~~~--------------~----~~~~~~~~~~kyG~ 48 (491)
T 3dax_A 16 PLENGLIPYLGCALQFGA--------------N----PLEFLRANQRKHGH 48 (491)
T ss_dssp CEEEEEESCTTTTGGGTC--------------C----HHHHHHHHHHHHCS
T ss_pred CcCCCcccchhhHHHHhh--------------C----HHHHHHHHHHhcCC
Confidence 56665 488999854411 1 12367899999995
No 26
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=61.76 E-value=5.2 Score=29.06 Aligned_cols=28 Identities=7% Similarity=-0.033 Sum_probs=20.5
Q ss_pred CCcCCCCCHHHHHHHHHHhhcCCCCCCCCcccccchHHHHHHHhhC
Q 034451 48 SYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYG 93 (94)
Q Consensus 48 ~~~~l~Gn~~e~~~~~~~a~~~~~~~shdi~prv~P~~~~w~k~YG 93 (94)
|..+++||..++.+ | | .++++++.++||
T Consensus 6 Pg~P~lG~~~~~~~--------------~--p--~~~~~~l~~~yg 33 (417)
T 1izo_A 6 PHDKSLDNSLTLLK--------------E--G--YLFIKNRTERYN 33 (417)
T ss_dssp CBCCCTTHHHHHHH--------------H--G--GGHHHHHHHHTT
T ss_pred CCCCccchHHHHhh--------------C--c--HHHHHHHHHHhC
Confidence 33378999988754 2 1 358899999998
No 27
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=61.74 E-value=3.8 Score=30.16 Aligned_cols=12 Identities=25% Similarity=0.249 Sum_probs=8.7
Q ss_pred hHHHHHHHhhCC
Q 034451 83 PFLHKLVNDYGM 94 (94)
Q Consensus 83 P~~~~w~k~YGk 94 (94)
..+.+|.++||+
T Consensus 47 ~~~~~l~~~yG~ 58 (496)
T 3qz1_A 47 IHLLSLTQKLGP 58 (496)
T ss_dssp HHHHHGGGTSCS
T ss_pred HHHHHHHHHhCC
Confidence 466788888874
No 28
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=55.31 E-value=9.4 Score=27.64 Aligned_cols=30 Identities=3% Similarity=-0.138 Sum_probs=18.6
Q ss_pred CCCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCCcccccchHHHHHHHhh-CC
Q 034451 44 LKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDY-GM 94 (94)
Q Consensus 44 I~GP~~~~l~Gn~~e~~~~~~~a~~~~~~~shdi~prv~P~~~~w~k~Y-Gk 94 (94)
++|| +++||..++.+ | | .+++.++.++| |+
T Consensus 4 pPg~---P~iG~~~~~~~--------------~--p--~~~~~~l~~~y~gp 34 (415)
T 3awm_A 4 TPHT---KGPDETLSLLA--------------D--P--YRFISRQCQRLGAN 34 (415)
T ss_dssp --------CCCCHHHHHH--------------S--T--TTHHHHHHHHHTSS
T ss_pred CCCC---CccchHHHHHh--------------C--h--HHHHHHHHHHhCCC
Confidence 4555 68999988754 2 1 36889999999 53
No 29
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=52.63 E-value=5.7 Score=29.10 Aligned_cols=38 Identities=13% Similarity=-0.034 Sum_probs=22.2
Q ss_pred CCCCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCCcccccchHHHHHHHhhCC
Q 034451 43 GLKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYGM 94 (94)
Q Consensus 43 GI~GP~~~~l~Gn~~e~~~~~~~a~~~~~~~shdi~prv~P~~~~w~k~YGk 94 (94)
-++||+...+ +|+.++... +-......++.+|.++||+
T Consensus 10 ~~PGP~~~~~-~~~~~~~~~-------------~~~~~~~~~~~~l~~kYG~ 47 (487)
T 3n9y_A 10 EIPSPGDNGW-LNLYHFWRE-------------TGTHKVHLHHVQNFQKYGP 47 (487)
T ss_dssp GSCCSCSCHH-HHHHHHHHH-------------TCGGGHHHHHHHHHHHHCS
T ss_pred hCCCCCCCCh-hhHHHHHhc-------------CCCcchhHHHHHHHHHcCc
Confidence 3889987544 376655330 0011222367899999995
No 30
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=51.06 E-value=2.2 Score=31.42 Aligned_cols=18 Identities=11% Similarity=-0.178 Sum_probs=14.9
Q ss_pred CCCCCCcCCCCCHHHHHH
Q 034451 44 LKGNSYRLLFGDLKENSI 61 (94)
Q Consensus 44 I~GP~~~~l~Gn~~e~~~ 61 (94)
.+||++-+++||..++.+
T Consensus 25 pPgP~~~P~iG~~~~~~~ 42 (467)
T 3dbg_A 25 PVAGGGVPLLGHGWRLAR 42 (467)
T ss_dssp CEECCCCSTTHHHHHHHH
T ss_pred CCCCCCCCcccchHHhcc
Confidence 678888899999988754
No 31
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=32.38 E-value=47 Score=21.03 Aligned_cols=34 Identities=12% Similarity=0.328 Sum_probs=26.2
Q ss_pred chHHHHHHHHHcCCCCCCCcCCC-CCHHHHHHHHH
Q 034451 31 RPKKLEKFLRQQGLKGNSYRLLF-GDLKENSIELK 64 (94)
Q Consensus 31 ~P~rl~~~lr~QGI~GP~~~~l~-Gn~~e~~~~~~ 64 (94)
.|..++++.++.|+..|...+++ |+..++.++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~~~~~~ 111 (170)
T 3me7_A 77 TLEDIKRFQKEYGIDGKGWKVVKAKTSEDLFKLLD 111 (170)
T ss_dssp CHHHHHHHHHHTTCCSSSEEEEEESSHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCCCCeEEEeCCCHHHHHHHHH
Confidence 47888999999999888777754 77777766544
No 32
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=26.40 E-value=7 Score=28.20 Aligned_cols=32 Identities=19% Similarity=-0.042 Sum_probs=21.7
Q ss_pred CCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCCcccccchHHHHHHHhhCC
Q 034451 45 KGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYGM 94 (94)
Q Consensus 45 ~GP~~~~l~Gn~~e~~~~~~~a~~~~~~~shdi~prv~P~~~~w~k~YGk 94 (94)
++++-..++||+.++.+ | | .+++.+|.++||+
T Consensus 2 ~~~~~~p~iGnl~~~~~--------------~--p--~~~~~~l~~~yGp 33 (389)
T 1n97_A 2 KRLSLREAWPYLKDLQQ--------------D--P--LAVLLAWGRAHPR 33 (389)
T ss_dssp EECCHHHHHHHHHHHHH--------------C--H--HHHHHHHHHHCSE
T ss_pred cccccccccccHHHHhh--------------C--h--HHHHHHHHHHcCC
Confidence 34555677899877643 2 1 2578889889984
No 33
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=23.45 E-value=78 Score=20.06 Aligned_cols=35 Identities=23% Similarity=0.411 Sum_probs=26.3
Q ss_pred chHHHHHHHHHcCCCCCCCcCCCCC-HHHHHHHHHH
Q 034451 31 RPKKLEKFLRQQGLKGNSYRLLFGD-LKENSIELKE 65 (94)
Q Consensus 31 ~P~rl~~~lr~QGI~GP~~~~l~Gn-~~e~~~~~~~ 65 (94)
.|.+++++.++.|...+...++.|. ..++.+....
T Consensus 82 tp~~l~~y~~~~~~~~~~~~~ltg~~~~~~~~~~~~ 117 (170)
T 4hde_A 82 KPENLKAFIQKFTEDTSNWNLLTGYSLEDITKFSKD 117 (170)
T ss_dssp CHHHHHHHHTTTCSCCTTEEEEBCSCHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCCCCCceecCcccHHHHHHHHHh
Confidence 4788999999999998888889995 4455554333
No 34
>1wij_A Ethylene-insensitive3-like 3 protein; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: a.140.5.1
Probab=22.89 E-value=13 Score=24.60 Aligned_cols=25 Identities=28% Similarity=0.543 Sum_probs=19.4
Q ss_pred HhchHHHHHHHHHcCCC---CCCCcCCCC
Q 034451 29 WLRPKKLEKFLRQQGLK---GNSYRLLFG 54 (94)
Q Consensus 29 w~~P~rl~~~lr~QGI~---GP~~~~l~G 54 (94)
|| |.--|..|-.+|++ ||||+-...
T Consensus 48 WW-PtG~E~WW~~lGl~~~~~PPYkkPhd 75 (140)
T 1wij_A 48 WW-PTGNEEWWVKLGLPKSQSPPYRKPHD 75 (140)
T ss_dssp HC-CCSCCHHHHHHTCCTTCCCCCCCGGG
T ss_pred CC-CCCCchhHHhcCCCCCCCCCCCCchh
Confidence 55 77778889999997 799986543
No 35
>1xrs_A D-lysine 5,6-aminomutase alpha subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.1.19.4
Probab=22.55 E-value=84 Score=24.96 Aligned_cols=44 Identities=16% Similarity=0.111 Sum_probs=30.0
Q ss_pred HHHHHHhchHHHHHHHHHcCCCCCCCcCC----CCCHHH-HHHHHHHhhc
Q 034451 24 VLNWVWLRPKKLEKFLRQQGLKGNSYRLL----FGDLKE-NSIELKEAKA 68 (94)
Q Consensus 24 ~~~~~w~~P~rl~~~lr~QGI~GP~~~~l----~Gn~~e-~~~~~~~a~~ 68 (94)
.+..+=-+-..-++++++.| .||.|-+. .||+.| +.+++++|+.
T Consensus 127 ~~~~i~~~r~~Re~~~~~~g-~~~~p~iy~ivAtG~i~eDi~qa~aAA~~ 175 (516)
T 1xrs_A 127 TVEKIKNNRSIRESRFEEYG-DKSGPLLYVIVATGNIYEDITQAVAAAKQ 175 (516)
T ss_dssp HHHHHHHHHHHHHHHHHHHC-CCSSCEEEEEECCSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhcC-CCCCCEEEEEEecCchHHHHHHHHHHHHc
Confidence 33444444555677899999 77877653 599877 7778777754
No 36
>1u57_A GAG polyprotein, HIV-1; particle assembly, viral protein; NMR {Human immunodeficiency virus 1}
Probab=22.18 E-value=23 Score=18.83 Aligned_cols=9 Identities=33% Similarity=0.615 Sum_probs=7.0
Q ss_pred cCCCCCCCc
Q 034451 42 QGLKGNSYR 50 (94)
Q Consensus 42 QGI~GP~~~ 50 (94)
||+.||.++
T Consensus 9 qgvggp~hK 17 (48)
T 1u57_A 9 QGVGGPGHK 17 (48)
T ss_dssp TTTSBCTTH
T ss_pred cCCCCCcch
Confidence 799888664
No 37
>2o5h_A Hypothetical protein; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; 1.90A {Neisseria meningitidis} SCOP: d.363.1.1
Probab=21.59 E-value=54 Score=21.65 Aligned_cols=35 Identities=17% Similarity=0.172 Sum_probs=26.7
Q ss_pred HHHHHHHcCCC-CCCCcCCCCCHHHHHHHHHHhhcC
Q 034451 35 LEKFLRQQGLK-GNSYRLLFGDLKENSIELKEAKAR 69 (94)
Q Consensus 35 l~~~lr~QGI~-GP~~~~l~Gn~~e~~~~~~~a~~~ 69 (94)
+++.|...-|+ +++..|+-|+..|..++..++.++
T Consensus 59 l~kLL~eG~iKLa~~G~fl~Gs~~EqVe~fR~~fP~ 94 (136)
T 2o5h_A 59 FKELLRRGHLKLQRDGQIIGHTPEEWEQIFREVWPE 94 (136)
T ss_dssp HHHHHHTTSEEEEETTEECCCCHHHHHHHHHHHCCS
T ss_pred HHHHHhCCcEEecCCCeeccCCHHHHHHHHHHHCCC
Confidence 34555555555 578899999999999999988654
No 38
>2wwb_A Protein transport protein SEC61 subunit alpha ISO; ribosome, protein EXIT tunnel, cotranslational protein translocation, protein conducting channel; 6.48A {Canis lupus familiaris}
Probab=21.17 E-value=2.9e+02 Score=21.38 Aligned_cols=30 Identities=20% Similarity=0.272 Sum_probs=22.0
Q ss_pred HHHHHHHH-----hchHHHHHHHHHcCCCCCCCcC
Q 034451 22 WRVLNWVW-----LRPKKLEKFLRQQGLKGNSYRL 51 (94)
Q Consensus 22 ~~~~~~~w-----~~P~rl~~~lr~QGI~GP~~~~ 51 (94)
..++...| ..|+.+.+.|++||.-=|-.|.
T Consensus 372 ~~fyt~~Wv~i~g~np~dvA~~Lkk~G~~IpGiRp 406 (476)
T 2wwb_A 372 CAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRE 406 (476)
T ss_dssp HHHHHHHHTTTSSCCHHHHHHHHHHHCTTTCCCCT
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHcCCccCCCCc
Confidence 35566667 7999999999999864444444
Done!