BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034452
(94 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6AVK1|COSA_ORYSJ Costars family protein OS=Oryza sativa subsp. japonica
GN=Os03g0690000 PE=3 SV=1
Length = 87
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 76/91 (83%), Positives = 81/91 (89%), Gaps = 4/91 (4%)
Query: 1 MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
MNVEEEV +LKEEIQRLG+ QPDGSYKVTFGV+F+DDRCANIFEALVGTLRAAKKRK +
Sbjct: 1 MNVEEEVGKLKEEIQRLGQKQPDGSYKVTFGVIFNDDRCANIFEALVGTLRAAKKRKIVK 60
Query: 61 YDGELLLQGVHDNVEITLKPPPPQPLAVAAA 91
YDGELLLQG HDNVEITL PPP AVAAA
Sbjct: 61 YDGELLLQGAHDNVEITLLPPP----AVAAA 87
>sp|A2XKU9|COSA_ORYSI Costars family protein OS=Oryza sativa subsp. indica
GN=OsI_012692 PE=3 SV=1
Length = 87
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 76/91 (83%), Positives = 81/91 (89%), Gaps = 4/91 (4%)
Query: 1 MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
MNVEEEV +LKEEIQRLG+ QPDGSYKVTFGV+F+DDRCANIFEALVGTLRAAKKRK +
Sbjct: 1 MNVEEEVGKLKEEIQRLGQKQPDGSYKVTFGVIFNDDRCANIFEALVGTLRAAKKRKIVK 60
Query: 61 YDGELLLQGVHDNVEITLKPPPPQPLAVAAA 91
YDGELLLQG HDNVEITL PPP AVAAA
Sbjct: 61 YDGELLLQGAHDNVEITLLPPP----AVAAA 87
>sp|A9NK39|COSA_PICSI Costars family protein WS02710_H03 OS=Picea sitchensis PE=3 SV=1
Length = 95
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/84 (80%), Positives = 74/84 (88%)
Query: 1 MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
+NV+EEVERLKEEI+RL + +PDGSY V FGVLF DDRCANIFEALVGTLRAAKKRK +T
Sbjct: 3 LNVDEEVERLKEEIKRLAQPRPDGSYVVKFGVLFSDDRCANIFEALVGTLRAAKKRKVVT 62
Query: 61 YDGELLLQGVHDNVEITLKPPPPQ 84
YDGELLLQGVHDNVEI L PP Q
Sbjct: 63 YDGELLLQGVHDNVEIVLLKPPTQ 86
>sp|Q8LBN7|COSA_ARATH Costars family protein At4g33640 OS=Arabidopsis thaliana
GN=At4g33640 PE=3 SV=1
Length = 95
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/79 (78%), Positives = 72/79 (91%)
Query: 1 MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
MNV+EE+++L+EEI RLG Q DGSYKVTFGVLF+DDRCANIFEALVGTLRAAKKRK +
Sbjct: 1 MNVDEEIQKLEEEIHRLGSRQTDGSYKVTFGVLFNDDRCANIFEALVGTLRAAKKRKIVA 60
Query: 61 YDGELLLQGVHDNVEITLK 79
++GELLLQGVHD VEITL+
Sbjct: 61 FEGELLLQGVHDKVEITLR 79
>sp|B4YYA9|COSA_THEHA Costars family protein ST45-2 OS=Thellungiella halophila PE=3
SV=1
Length = 92
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/92 (78%), Positives = 82/92 (89%)
Query: 1 MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
MNVEEE+++L+EEI RLG +Q DGSYKVTFGVLF+DDRCANIFEALVGTLRAAKKRK +
Sbjct: 1 MNVEEEIQKLEEEIHRLGSLQSDGSYKVTFGVLFNDDRCANIFEALVGTLRAAKKRKIVA 60
Query: 61 YDGELLLQGVHDNVEITLKPPPPQPLAVAAAA 92
+ GELLLQGVHD VEITL+PPPP P AVAA +
Sbjct: 61 FPGELLLQGVHDKVEITLRPPPPPPQAVAATS 92
>sp|B5X8A5|ABRAL_SALSA Costars family protein ABRACL OS=Salmo salar PE=3 SV=1
Length = 81
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/78 (70%), Positives = 63/78 (80%)
Query: 1 MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
MNV+ EV L EIQRLG DG V FGVLF+DDRCANIFEALVGTLRAAK++K +
Sbjct: 1 MNVQHEVSLLVGEIQRLGSKNADGQTCVKFGVLFNDDRCANIFEALVGTLRAAKRKKIIA 60
Query: 61 YDGELLLQGVHDNVEITL 78
++GELLLQGVHDNV+ITL
Sbjct: 61 FEGELLLQGVHDNVDITL 78
>sp|Q4KML4|ABRAL_MOUSE Costars family protein ABRACL OS=Mus musculus GN=Abracl PE=3 SV=1
Length = 81
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/78 (70%), Positives = 61/78 (78%)
Query: 1 MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
MNVE EV L EEI RLG DG V FGVLF DDRCAN+FEALVGTL+AAK+RK +T
Sbjct: 1 MNVEHEVNLLVEEIHRLGSKNADGKLSVKFGVLFQDDRCANLFEALVGTLKAAKRRKIVT 60
Query: 61 YDGELLLQGVHDNVEITL 78
Y GELLLQGVHD+V+I L
Sbjct: 61 YAGELLLQGVHDDVDIVL 78
>sp|A4IHJ3|ABRAL_XENTR Costars family protein ABRACL OS=Xenopus tropicalis GN=abracl
PE=3 SV=1
Length = 81
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/78 (70%), Positives = 62/78 (79%)
Query: 1 MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
MNV+ EV L EEI+RLG DG V FGVLF DD+CAN+FEALVGTL+AAKKRK +T
Sbjct: 1 MNVDHEVNLLVEEIRRLGSKGNDGKLSVKFGVLFSDDKCANLFEALVGTLKAAKKRKIVT 60
Query: 61 YDGELLLQGVHDNVEITL 78
Y GELLLQGVHDNV+I L
Sbjct: 61 YQGELLLQGVHDNVDIVL 78
>sp|Q498C5|ABRAL_XENLA Costars family protein ABRACL OS=Xenopus laevis GN=abracl PE=3
SV=1
Length = 81
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/78 (69%), Positives = 62/78 (79%)
Query: 1 MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
MNV+ EV L EI+RLG DG + V FGVLF DD+CAN+FEALVGTL+AAKKRK +T
Sbjct: 1 MNVDHEVNLLVGEIRRLGSKGNDGKFSVKFGVLFSDDKCANLFEALVGTLKAAKKRKIIT 60
Query: 61 YDGELLLQGVHDNVEITL 78
Y GELLLQGVHDNV+I L
Sbjct: 61 YQGELLLQGVHDNVDIVL 78
>sp|Q6TGV7|ABRAL_DANRE Costars family protein ABRACL OS=Danio rerio GN=abracl PE=3 SV=1
Length = 81
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 52/78 (66%), Positives = 64/78 (82%)
Query: 1 MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
MNVE EV L +EI+RLG DG V FGVLF+DD+CAN+FEALVGTL+AAK++K +T
Sbjct: 1 MNVEHEVSLLIDEIRRLGSKNADGKTSVKFGVLFNDDQCANLFEALVGTLKAAKRKKVIT 60
Query: 61 YDGELLLQGVHDNVEITL 78
+DGELLLQGVHDNV++ L
Sbjct: 61 FDGELLLQGVHDNVDVVL 78
>sp|Q3ZBN0|ABRAL_BOVIN Costars family protein ABRACL OS=Bos taurus GN=ABRACL PE=3 SV=1
Length = 81
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/78 (67%), Positives = 62/78 (79%)
Query: 1 MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
MNV+ EV+ L EEI RLG DG V FGVLF DD+CAN+FEALVGTL+AAK+RK +T
Sbjct: 1 MNVDHEVKLLVEEIHRLGSKNADGKLSVKFGVLFQDDKCANLFEALVGTLKAAKRRKIIT 60
Query: 61 YDGELLLQGVHDNVEITL 78
Y GELLLQGVHD+V+I L
Sbjct: 61 YSGELLLQGVHDDVDIIL 78
>sp|Q6V289|ABRAL_COTCO Costars family protein ABRACL OS=Coturnix coturnix PE=3 SV=2
Length = 81
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 53/78 (67%), Positives = 62/78 (79%)
Query: 1 MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
MNVE E+ L EEI+RLG DG V FGVLF D++CAN+FEALVGTL+AAK+RK +T
Sbjct: 1 MNVEHEISLLVEEIRRLGTKNADGQVSVKFGVLFADEKCANLFEALVGTLKAAKRRKIVT 60
Query: 61 YDGELLLQGVHDNVEITL 78
Y GELLLQGVHDNV+I L
Sbjct: 61 YQGELLLQGVHDNVDIVL 78
>sp|Q9P1F3|ABRAL_HUMAN Costars family protein ABRACL OS=Homo sapiens GN=ABRACL PE=1 SV=1
Length = 81
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/78 (67%), Positives = 61/78 (78%)
Query: 1 MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
MNV+ EV L EEI RLG DG V FGVLF DD+CAN+FEALVGTL+AAK+RK +T
Sbjct: 1 MNVDHEVNLLVEEIHRLGSKNADGKLSVKFGVLFRDDKCANLFEALVGTLKAAKRRKIVT 60
Query: 61 YDGELLLQGVHDNVEITL 78
Y GELLLQGVHD+V+I L
Sbjct: 61 YPGELLLQGVHDDVDIIL 78
>sp|A7RHL5|COSA_NEMVE Costars family protein v1g158749 OS=Nematostella vectensis
GN=v1g158749 PE=3 SV=1
Length = 82
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/78 (66%), Positives = 63/78 (80%)
Query: 1 MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
MNVE EV+ L EE++RLG+ D V FGVLF+DDRCANIFEALVGTL+AAK++K +
Sbjct: 1 MNVEHEVKLLVEELKRLGQPNSDDKIVVKFGVLFNDDRCANIFEALVGTLKAAKRKKIVH 60
Query: 61 YDGELLLQGVHDNVEITL 78
YD ELLLQGVHD+V+I L
Sbjct: 61 YDSELLLQGVHDHVDIVL 78
>sp|Q558Y7|COSA_DICDI Protein costars OS=Dictyostelium discoideum GN=cosA PE=2 SV=1
Length = 82
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 59/78 (75%)
Query: 1 MNVEEEVERLKEEIQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLT 60
M+V+ EV+ L + I++LG DG Y V +GVLF+DD AN FEALVGTL+AAKKR +T
Sbjct: 1 MDVDHEVKELVKFIKKLGTKGADGKYSVKYGVLFNDDDVANFFEALVGTLKAAKKRGIIT 60
Query: 61 YDGELLLQGVHDNVEITL 78
+ GE+LLQ VHDNV++ L
Sbjct: 61 FQGEILLQRVHDNVDVIL 78
>sp|Q8BUZ1|ABRA_MOUSE Actin-binding Rho-activating protein OS=Mus musculus GN=Abra PE=1
SV=1
Length = 375
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 14 IQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDN 73
I+ + + + DG +VTFG LF DR I + +VG L A+K + ++GE+L QG D+
Sbjct: 311 IRTMARHRRDGKIQVTFGELF--DRYVRISDKVVGILMRARKHGLVHFEGEMLWQGRDDH 368
Query: 74 VEITL 78
V ITL
Sbjct: 369 VVITL 373
>sp|Q8K4K7|ABRA_RAT Actin-binding Rho-activating protein OS=Rattus norvegicus GN=Abra
PE=1 SV=2
Length = 375
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 14 IQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDN 73
I+ + + + DG +VTFG LF DR I + +VG L A+K + ++GE+L QG D+
Sbjct: 311 IRTMARHRRDGKIQVTFGELF--DRYVRISDKVVGILMRARKHGLVHFEGEMLWQGKDDH 368
Query: 74 VEITL 78
V ITL
Sbjct: 369 VVITL 373
>sp|B5SNZ6|ABRA_PIG Actin-binding Rho-activating protein OS=Sus scrofa GN=ABRA PE=2
SV=1
Length = 384
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 14 IQRLGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAAKKRKFLTYDGELLLQGVHDN 73
I+ + + DG +VTFG LF DR I + +VG L A+K + ++GE+L QG D+
Sbjct: 320 IRTMAHPRRDGKIQVTFGDLF--DRYVRISDKVVGILMRARKHGLVDFEGEMLWQGRDDH 377
Query: 74 VEITL 78
V ITL
Sbjct: 378 VVITL 382
>sp|Q8N0Z2|ABRA_HUMAN Actin-binding Rho-activating protein OS=Homo sapiens GN=ABRA PE=2
SV=1
Length = 381
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 13/85 (15%)
Query: 5 EEVERLKEEIQR-----------LGKIQPDGSYKVTFGVLFHDDRCANIFEALVGTLRAA 53
E +R +E I R + + + DG +VTFG LF DR I + +VG L A
Sbjct: 297 ERAKRAEEHIYREMMDMCFIICTMARHRRDGKIQVTFGDLF--DRYVRISDKVVGILMRA 354
Query: 54 KKRKFLTYDGELLLQGVHDNVEITL 78
+K + ++GE+L QG D+V ITL
Sbjct: 355 RKHGLVDFEGEMLWQGRDDHVVITL 379
>sp|A9VN58|ISPE_BACWK 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Bacillus
weihenstephanensis (strain KBAB4) GN=ispE PE=3 SV=1
Length = 289
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 6 EVERLKEEIQRLGK--IQPDGSYKVTFGVLFHDDRCANIFEALVG 48
EV R+K +++R G + GS FG++ HD R I+ L G
Sbjct: 227 EVARIKSQMKRFGADAVLMSGSGPTVFGLVHHDSRMHRIYNGLKG 271
>sp|Q81JA2|ISPE_BACCR 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Bacillus
cereus (strain ATCC 14579 / DSM 31) GN=ispE PE=3 SV=1
Length = 289
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 6 EVERLKEEIQRLGK--IQPDGSYKVTFGVLFHDDRCANIFEALVG 48
EV R+K +++R G + GS FG++ HD R I+ L G
Sbjct: 227 EVARIKSQMKRFGADAVLMSGSGPTVFGLVHHDSRMHRIYNGLKG 271
>sp|B7HIL3|ISPE_BACC4 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Bacillus
cereus (strain B4264) GN=ispE PE=3 SV=1
Length = 289
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 6 EVERLKEEIQRLGK--IQPDGSYKVTFGVLFHDDRCANIFEALVG 48
EV R+K +++R G + GS FG++ HD R I+ L G
Sbjct: 227 EVARIKSQMKRFGADAVLMSGSGPTVFGLVHHDSRMHRIYNGLKG 271
>sp|B7ISV5|ISPE_BACC2 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Bacillus
cereus (strain G9842) GN=ispE PE=3 SV=1
Length = 289
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 6 EVERLKEEIQRLGK--IQPDGSYKVTFGVLFHDDRCANIFEALVG 48
EV R+K +++R G + GS FG++ HD R I+ L G
Sbjct: 227 EVARIKSQMKRFGADAVLMSGSGPTVFGLVHHDSRMHRIYNGLKG 271
>sp|Q6HPX2|ISPE_BACHK 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Bacillus
thuringiensis subsp. konkukian (strain 97-27) GN=ispE
PE=3 SV=1
Length = 292
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 6 EVERLKEEIQRLGK--IQPDGSYKVTFGVLFHDDRCANIFEALVG 48
EV R+K +++R G + GS FG++ HD R I+ L G
Sbjct: 230 EVARIKAQMKRFGADAVLMSGSGPTVFGLVHHDSRMHRIYNGLKG 274
>sp|Q63HI8|ISPE_BACCZ 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Bacillus
cereus (strain ZK / E33L) GN=ispE PE=3 SV=1
Length = 292
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 6 EVERLKEEIQRLGK--IQPDGSYKVTFGVLFHDDRCANIFEALVG 48
EV R+K +++R G + GS FG++ HD R I+ L G
Sbjct: 230 EVARIKAQMKRFGADAVLMSGSGPTVFGLVHHDSRMHRIYNGLKG 274
>sp|B9IZC8|ISPE_BACCQ 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Bacillus
cereus (strain Q1) GN=ispE PE=3 SV=1
Length = 292
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 6 EVERLKEEIQRLGK--IQPDGSYKVTFGVLFHDDRCANIFEALVG 48
EV R+K +++R G + GS FG++ HD R I+ L G
Sbjct: 230 EVARIKAQMKRFGADAVLMSGSGPTVFGLVHHDSRMHRIYNGLKG 274
>sp|A0R8B7|ISPE_BACAH 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Bacillus
thuringiensis (strain Al Hakam) GN=ispE PE=3 SV=1
Length = 292
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 6 EVERLKEEIQRLGK--IQPDGSYKVTFGVLFHDDRCANIFEALVG 48
EV R+K +++R G + GS FG++ HD R I+ L G
Sbjct: 230 EVARIKAQMKRFGADAVLMSGSGPTVFGLVHHDSRMHRIYNGLKG 274
>sp|B7HPV6|ISPE_BACC7 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Bacillus
cereus (strain AH187) GN=ispE PE=3 SV=1
Length = 289
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 6 EVERLKEEIQRLGK--IQPDGSYKVTFGVLFHDDRCANIFEALVG 48
EV R+K +++R G + GS FG++ HD R I+ L G
Sbjct: 227 EVARIKAQMKRFGADAVLMSGSGPTVFGLVHHDSRMHRIYNGLKG 271
>sp|C1ESX4|ISPE_BACC3 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Bacillus
cereus (strain 03BB102) GN=ispE PE=3 SV=1
Length = 289
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 6 EVERLKEEIQRLGK--IQPDGSYKVTFGVLFHDDRCANIFEALVG 48
EV R+K +++R G + GS FG++ HD R I+ L G
Sbjct: 227 EVARIKAQMKRFGADAVLMSGSGPTVFGLVHHDSRMHRIYNGLKG 271
>sp|Q73FG3|ISPE_BACC1 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Bacillus
cereus (strain ATCC 10987) GN=ispE PE=3 SV=1
Length = 289
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 6 EVERLKEEIQRLGK--IQPDGSYKVTFGVLFHDDRCANIFEALVG 48
EV R+K +++R G + GS FG++ HD R I+ L G
Sbjct: 227 EVARIKAQMKRFGADAVLMSGSGPTVFGLVHHDSRMHRIYNGLKG 271
>sp|B7JK51|ISPE_BACC0 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Bacillus
cereus (strain AH820) GN=ispE PE=3 SV=1
Length = 289
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 6 EVERLKEEIQRLGK--IQPDGSYKVTFGVLFHDDRCANIFEALVG 48
EV R+K +++R G + GS FG++ HD R I+ L G
Sbjct: 227 EVARIKAQMKRFGADAVLMSGSGPTVFGLVHHDSRMHRIYNGLKG 271
>sp|Q81VZ6|ISPE_BACAN 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Bacillus
anthracis GN=ispE PE=3 SV=1
Length = 289
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 6 EVERLKEEIQRLGK--IQPDGSYKVTFGVLFHDDRCANIFEALVG 48
EV R+K +++R G + GS FG++ HD R I+ L G
Sbjct: 227 EVARIKAQMKRFGADAVLMSGSGPTVFGLVHHDSRMHRIYNGLKG 271
>sp|C3LJ17|ISPE_BACAC 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Bacillus
anthracis (strain CDC 684 / NRRL 3495) GN=ispE PE=3 SV=1
Length = 289
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 6 EVERLKEEIQRLGK--IQPDGSYKVTFGVLFHDDRCANIFEALVG 48
EV R+K +++R G + GS FG++ HD R I+ L G
Sbjct: 227 EVARIKAQMKRFGADAVLMSGSGPTVFGLVHHDSRMHRIYNGLKG 271
>sp|C3P9J0|ISPE_BACAA 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Bacillus
anthracis (strain A0248) GN=ispE PE=3 SV=1
Length = 289
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 6 EVERLKEEIQRLGK--IQPDGSYKVTFGVLFHDDRCANIFEALVG 48
EV R+K +++R G + GS FG++ HD R I+ L G
Sbjct: 227 EVARIKAQMKRFGADAVLMSGSGPTVFGLVHHDSRMHRIYNGLKG 271
>sp|A7GJV7|ISPE_BACCN 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Bacillus
cereus subsp. cytotoxis (strain NVH 391-98) GN=ispE PE=3
SV=1
Length = 289
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 6 EVERLKEEIQRLGK--IQPDGSYKVTFGVLFHDDRCANIFEALVG 48
EV R+K ++R G + GS FG++ HD R I+ L G
Sbjct: 227 EVARIKTRMKRFGADAVLMSGSGPTVFGLVHHDSRMHRIYNGLKG 271
>sp|C5D367|ISPE_GEOSW 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Geobacillus
sp. (strain WCH70) GN=ispE PE=3 SV=1
Length = 289
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 6 EVERLKEEIQRLGK--IQPDGSYKVTFGVLFHDDRCANIFEALVG 48
EV +KE+++R G + GS FG++ HD R I+ L G
Sbjct: 227 EVAHIKEQMKRFGADAVLMSGSGPTVFGLVQHDSRLQRIYNGLRG 271
>sp|A4IJC2|ISPE_GEOTN 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Geobacillus
thermodenitrificans (strain NG80-2) GN=ispE PE=3 SV=1
Length = 290
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 6 EVERLKEEIQRLGK--IQPDGSYKVTFGVLFHDDRCANIFEALVG 48
EV +KE+++R G + GS FG++ HD R ++ L G
Sbjct: 228 EVAHIKEQMRRFGADAVLMSGSGPTVFGLIEHDSRMQRVYNGLRG 272
>sp|Q0AIV2|RL19_NITEC 50S ribosomal protein L19 OS=Nitrosomonas eutropha (strain C91)
GN=rplS PE=3 SV=1
Length = 129
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 1 MNVEEEVERLKEEIQRLGKIQPDGS----YKVTFGVLFHDDRCANIFEALV 47
MN+ E++ER EEI+RLGKI PD S V V+ D + FE +V
Sbjct: 1 MNLIEQLER--EEIERLGKIIPDFSPGDTLVVNVNVVEGDRKRTQAFEGVV 49
>sp|Q5L3V4|ISPE_GEOKA 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Geobacillus
kaustophilus (strain HTA426) GN=ispE PE=3 SV=1
Length = 290
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 6 EVERLKEEIQRLGK--IQPDGSYKVTFGVLFHDDRCANIFEALVG 48
EV +KE+++R G + GS FG++ HD R ++ L G
Sbjct: 228 EVAHIKEQMKRFGADAVLMSGSGPTVFGLIEHDSRMQRVYNGLRG 272
>sp|Q82U36|RL19_NITEU 50S ribosomal protein L19 OS=Nitrosomonas europaea (strain ATCC
19718 / NBRC 14298) GN=rplS PE=3 SV=1
Length = 132
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 1 MNVEEEVERLKEEIQRLGKIQPDGS----YKVTFGVLFHDDRCANIFEALV 47
MN+ E++ER EEI+RLGK PD S V V+ D + FE +V
Sbjct: 1 MNLIEQLER--EEIERLGKTIPDFSPGDTLVVNVNVVEGDRKRVQAFEGVV 49
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.137 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,962,806
Number of Sequences: 539616
Number of extensions: 1340666
Number of successful extensions: 5645
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 5619
Number of HSP's gapped (non-prelim): 46
length of query: 94
length of database: 191,569,459
effective HSP length: 64
effective length of query: 30
effective length of database: 157,034,035
effective search space: 4711021050
effective search space used: 4711021050
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)