BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034454
(94 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O81796|IDH3_ARATH Isocitrate dehydrogenase [NAD] regulatory subunit 3, mitochondrial
OS=Arabidopsis thaliana GN=IDH3 PE=1 SV=1
Length = 368
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 83/94 (88%), Positives = 90/94 (95%)
Query: 1 MPGGNVGADHAIFEQGASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLET 60
MPGGNVGA+HAIFEQGASAGNVGN+K+VEQKKANPVALLLSSAMMLRHL+FP+FADRLET
Sbjct: 275 MPGGNVGAEHAIFEQGASAGNVGNDKMVEQKKANPVALLLSSAMMLRHLRFPTFADRLET 334
Query: 61 AVKRVISEGKCRTKDLGGSSTTQEIVDAVIAALE 94
AVK+VI EGK RTKDLGG TTQE+VDAVIAALE
Sbjct: 335 AVKQVIKEGKYRTKDLGGDCTTQEVVDAVIAALE 368
>sp|Q8LFC0|IDH1_ARATH Isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial
OS=Arabidopsis thaliana GN=IDH1 PE=1 SV=2
Length = 367
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 90/94 (95%)
Query: 1 MPGGNVGADHAIFEQGASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLET 60
MPGGNVGADHA+FEQGASAGNVG +K+V + KANPVALLLSSAMMLRHLQFPSFADRLET
Sbjct: 274 MPGGNVGADHAVFEQGASAGNVGKDKIVLENKANPVALLLSSAMMLRHLQFPSFADRLET 333
Query: 61 AVKRVISEGKCRTKDLGGSSTTQEIVDAVIAALE 94
AVK+VI+EGKCRTKDLGG+STTQE+VDAVIA L+
Sbjct: 334 AVKKVIAEGKCRTKDLGGTSTTQEVVDAVIAKLD 367
>sp|P93032|IDH2_ARATH Isocitrate dehydrogenase [NAD] regulatory subunit 2, mitochondrial
OS=Arabidopsis thaliana GN=IDH2 PE=1 SV=2
Length = 367
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 78/94 (82%), Positives = 87/94 (92%)
Query: 1 MPGGNVGADHAIFEQGASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLET 60
MPGGNVGA++A+FEQGASAGNVG + EQK ANPVALLLSSAMMLRHLQFPSFADRLET
Sbjct: 274 MPGGNVGAEYAVFEQGASAGNVGKDTTEEQKNANPVALLLSSAMMLRHLQFPSFADRLET 333
Query: 61 AVKRVISEGKCRTKDLGGSSTTQEIVDAVIAALE 94
AVKRVI+EG CRT+DLGG+STTQE+VDAVIA L+
Sbjct: 334 AVKRVIAEGNCRTEDLGGNSTTQEVVDAVIANLD 367
>sp|Q9LQK9|IDH4_ARATH Putative isocitrate dehydrogenase [NAD] subunit-like 4
OS=Arabidopsis thaliana GN=IDH4 PE=5 SV=1
Length = 294
Score = 97.4 bits (241), Expect = 2e-20, Method: Composition-based stats.
Identities = 55/92 (59%), Positives = 64/92 (69%), Gaps = 14/92 (15%)
Query: 3 GGNVGADHAIFEQGASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLETAV 62
GG+ G D+AIFEQ G+VGN K NPVALL SS MMLRHL P FADRL+TAV
Sbjct: 217 GGSFGDDYAIFEQ---VGSVGNHK-------NPVALLFSSVMMLRHLLLPLFADRLKTAV 266
Query: 63 KRVISEGKCRTKDLGGSSTTQEIVDAVIAALE 94
RVISEGKC + +TTQE+VD+VIA L+
Sbjct: 267 TRVISEGKCGNSN----TTTQEVVDSVIANLD 294
>sp|O94229|IDH1_KLULA Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=IDH1 PE=3
SV=1
Length = 361
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 63/93 (67%), Gaps = 3/93 (3%)
Query: 1 MPGGNVGADHAIFEQGASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLET 60
+PG N G ++A+FE G+ +VG + + Q ANP A++LSS +MLRHL ++ADR+
Sbjct: 269 VPGANFGREYAVFEPGSR--HVGLD-IKGQNVANPTAMILSSTLMLRHLGLNAYADRISK 325
Query: 61 AVKRVISEGKCRTKDLGGSSTTQEIVDAVIAAL 93
A VISEGK T+D+GGS++T E +AVI L
Sbjct: 326 ATYDVISEGKSTTRDIGGSASTSEFTNAVIEKL 358
>sp|O13696|IDH1_SCHPO Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=idh1 PE=1 SV=1
Length = 356
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 1 MPGGNVGADHAIFEQGASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLET 60
+PG N G D+A+FE G +VG + + +ANP A +LS+ +MLRHL +AD +
Sbjct: 264 IPGANFGRDYALFEPGCR--HVG-LSITGRGEANPTAAILSACLMLRHLGLKDYADLINA 320
Query: 61 AVKRVISEGKCRTKDLGGSSTTQEIVDAVIAALE 94
A VI EGK TKDLGGS++T + A++ +E
Sbjct: 321 ATYSVIEEGKTLTKDLGGSASTGDFTHAILERME 354
>sp|O13302|IDH1_AJECA Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial
OS=Ajellomyces capsulatus GN=IDH1 PE=2 SV=1
Length = 388
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
Query: 1 MPGGNVGADHAIFEQGASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLET 60
+PG N+G D A+FE G +VG + + + +ANP AL+LS +M+LRHL A+R+
Sbjct: 295 VPGCNMGRDVAVFEPGCR--HVGLD-IKGKDQANPTALILSGSMLLRHLGLDEHANRISK 351
Query: 61 AVKRVISEGKCRTKDLGGSSTTQEIVDAVIAALE 94
AV VI EG RT+D+GG ++T E AV+ +E
Sbjct: 352 AVYDVIGEGVTRTRDMGGQASTHEFTRAVLDKME 385
>sp|Q93353|IDH3B_CAEEL Probable isocitrate dehydrogenase [NAD] subunit beta, mitochondrial
OS=Caenorhabditis elegans GN=C37E2.1 PE=3 SV=1
Length = 379
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Query: 1 MPGGNVGADHAIFEQGASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLET 60
+PG +VG D IFE G+ ++ + + ANP A++L +A ML HL ++ + L
Sbjct: 288 VPGQSVGRDFVIFEPGSRHSF---QEAMGRSIANPTAMILCAANMLNHLHLDAWGNSLRQ 344
Query: 61 AVKRVISEGKCRTKDLGGSSTTQEIVDAVI 90
AV V+ EGK RT+DLGG +TT + DAVI
Sbjct: 345 AVADVVKEGKVRTRDLGGYATTVDFADAVI 374
>sp|Q945K7|IDH5_ARATH Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial
OS=Arabidopsis thaliana GN=IDH5 PE=1 SV=1
Length = 374
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 7/90 (7%)
Query: 2 PGGNVGADHAIFEQG--ASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLE 59
P N+G D + SA ++ + L ANP ALLLS MMLRHL+F A+++
Sbjct: 286 PSCNIGEDGVALAEAVHGSAPDIAGKNL-----ANPTALLLSGVMMLRHLKFNEQAEQIH 340
Query: 60 TAVKRVISEGKCRTKDLGGSSTTQEIVDAV 89
+A+ I+EGK RT DLGGSSTT E A+
Sbjct: 341 SAIINTIAEGKYRTADLGGSSTTTEFTKAI 370
>sp|P28834|IDH1_YEAST Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=IDH1 PE=1 SV=2
Length = 360
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 3 GGNVGADHAIFEQGASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLETAV 62
G N G D+A+FE G+ +VG + + Q ANP A++LSS +ML HL +A R+ AV
Sbjct: 270 GANFGRDYAVFEPGSR--HVGLD-IKGQNVANPTAMILSSTLMLNHLGLNEYATRISKAV 326
Query: 63 KRVISEGKCRTKDLGGSSTTQEIVDAVIAAL 93
I+EGK T+D+GGSS+T + + +I L
Sbjct: 327 HETIAEGKHTTRDIGGSSSTTDFTNEIINKL 357
>sp|O94230|IDH2_KLULA Isocitrate dehydrogenase [NAD] subunit 2, mitochondrial
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=IDH2 PE=3
SV=1
Length = 368
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 54/95 (56%), Gaps = 9/95 (9%)
Query: 2 PGGNVGADHAIFE--QGASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLE 59
P N+G +IFE G++ G Q KANP ALLLSS MML H+ AD++E
Sbjct: 280 PSANIGHTVSIFEAVHGSAPDIAG------QNKANPTALLLSSVMMLNHMGLTEHADKIE 333
Query: 60 TAVKRVI-SEGKCRTKDLGGSSTTQEIVDAVIAAL 93
AV I S+ K RT DLGGS++T DAVI L
Sbjct: 334 KAVLTTIASDAKNRTGDLGGSASTSSFTDAVIERL 368
>sp|Q9VWH4|IDH3A_DROME Probable isocitrate dehydrogenase [NAD] subunit alpha,
mitochondrial OS=Drosophila melanogaster GN=l(1)G0156
PE=2 SV=1
Length = 377
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 55/93 (59%), Gaps = 6/93 (6%)
Query: 2 PGGNVGADHAIFEQ-GASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLET 60
P GN+G + A+FE +A ++ + L ANP ALLLS+ MMLRH++ ++AD++E
Sbjct: 290 PSGNMGLNGALFESVHGTAPDIAGKDL-----ANPTALLLSAVMMLRHMELNTYADKIER 344
Query: 61 AVKRVISEGKCRTKDLGGSSTTQEIVDAVIAAL 93
A I EGK T DLGG + E + + A L
Sbjct: 345 AAFETIKEGKYLTGDLGGRAKCSEFTNEICAKL 377
>sp|Q93714|IDH3A_CAEEL Probable isocitrate dehydrogenase [NAD] subunit alpha,
mitochondrial OS=Caenorhabditis elegans GN=F43G9.1 PE=1
SV=3
Length = 358
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 53/95 (55%), Gaps = 8/95 (8%)
Query: 2 PGGNVGADHAIFE--QGASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLE 59
P GN+G A+FE G + G Q KANP ALLLS+ MMLR++ P A R+E
Sbjct: 267 PSGNIGKGAAVFESVHGTAPDIAG------QDKANPTALLLSAVMMLRYMNLPQHAARIE 320
Query: 60 TAVKRVISEGKCRTKDLGGSSTTQEIVDAVIAALE 94
AV I++G+ +T DLGG+ T V A ++
Sbjct: 321 KAVFDAIADGRAKTGDLGGTGTCSSFTADVCARVK 355
>sp|Q54B68|IDHB_DICDI Isocitrate dehydrogenase [NAD] regulatory subunit B, mitochondrial
OS=Dictyostelium discoideum GN=idhB PE=3 SV=1
Length = 360
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 3 GGNVGADHAIFEQGAS--AGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLET 60
G NVG IFE GA A ++ + KANP LLL+S MML+HL A ++E
Sbjct: 269 GANVGEGSIIFEMGAHHVAADIAG-----KDKANPTGLLLASVMMLKHLGLNEHATKVEN 323
Query: 61 AVKRVISEGKCRTKDLGGSSTTQEIVDAVIAALE 94
AVK VI EG T D+GG S+T++ AVI +E
Sbjct: 324 AVKAVIKEGTL-TSDIGGKSSTKQFTGAVIDYIE 356
>sp|Q9USP8|IDH2_SCHPO Isocitrate dehydrogenase [NAD] subunit 2, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=idh2 PE=1 SV=2
Length = 379
Score = 66.2 bits (160), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 7/95 (7%)
Query: 2 PGGNVGADHAIFEQ-GASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLET 60
P GN+G +IFE +A ++ + L ANP ALLLSS MML+H+ +A R+E+
Sbjct: 290 PSGNIGNQASIFEAVHGTAPDIAGKGL-----ANPTALLLSSVMMLKHMNLNDYAKRIES 344
Query: 61 AVKRVISEG-KCRTKDLGGSSTTQEIVDAVIAALE 94
A+ ++ RTKDLGG S + DA+I+ L+
Sbjct: 345 AIFDTLANNPDARTKDLGGKSNNVQYTDAIISKLK 379
>sp|Q8LG77|IDH6_ARATH Isocitrate dehydrogenase [NAD] catalytic subunit 6, mitochondrial
OS=Arabidopsis thaliana GN=IDH6 PE=1 SV=2
Length = 374
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 2 PGGNVGADHAIFEQGA--SAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLE 59
P N+G D + SA ++ L ANP ALLLS MMLRHL+ A+++
Sbjct: 286 PSMNIGEDGIALAEAVHGSAPDIAGMNL-----ANPTALLLSGVMMLRHLKLNKQAEQIH 340
Query: 60 TAVKRVISEGKCRTKDLGGSSTTQEIVDAV 89
+A+ I+EGK RT DLGGSSTT + A+
Sbjct: 341 SAIINTIAEGKYRTADLGGSSTTTDFTKAI 370
>sp|Q55BI2|IDHA_DICDI Isocitrate dehydrogenase [NAD] regulatory subunit A, mitochondrial
OS=Dictyostelium discoideum GN=idhA PE=3 SV=1
Length = 354
Score = 63.5 bits (153), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/93 (43%), Positives = 55/93 (59%), Gaps = 5/93 (5%)
Query: 2 PGGNVGAD-HAIFEQGASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLET 60
P GN+G + AIFE A G + + + KANP AL+LSS MMLRHL A +E
Sbjct: 260 PSGNIGENGSAIFE--AVHGTAPD--IAGKNKANPTALILSSIMMLRHLGHFHEASIIEN 315
Query: 61 AVKRVISEGKCRTKDLGGSSTTQEIVDAVIAAL 93
AV ++EGK +T DLGG+S+ E D ++ +
Sbjct: 316 AVLNTLTEGKVKTGDLGGNSSCSEYTDELVKKI 348
>sp|P28241|IDH2_YEAST Isocitrate dehydrogenase [NAD] subunit 2, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=IDH2 PE=1 SV=1
Length = 369
Score = 63.5 bits (153), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/93 (43%), Positives = 55/93 (59%), Gaps = 5/93 (5%)
Query: 2 PGGNVGADHAIFEQGASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLETA 61
P N+G +IFE A G+ + + Q KANP ALLLSS MML H+ + AD+++ A
Sbjct: 281 PSANIGHKISIFE--AVHGSAPD--IAGQDKANPTALLLSSVMMLNHMGLTNHADQIQNA 336
Query: 62 VKRVISEG-KCRTKDLGGSSTTQEIVDAVIAAL 93
V I+ G + RT DL G++TT +AVI L
Sbjct: 337 VLSTIASGPENRTGDLAGTATTSSFTEAVIKRL 369
>sp|P41563|IDH3A_BOVIN Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Bos
taurus GN=IDH3A PE=1 SV=1
Length = 366
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 7/90 (7%)
Query: 2 PGGNVGADH-AIFEQ-GASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLE 59
P GN+GA+ AIFE +A ++ + + ANP ALLLS+ MMLRH+ A ++E
Sbjct: 274 PSGNIGANGVAIFESVHGTAPDIAGKDM-----ANPTALLLSAVMMLRHMGLFDHAAKIE 328
Query: 60 TAVKRVISEGKCRTKDLGGSSTTQEIVDAV 89
TA I +GK TKDLGG+S + + +
Sbjct: 329 TACFATIKDGKSLTKDLGGNSKCSDFTEEI 358
>sp|Q5R678|IDH3A_PONAB Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial
OS=Pongo abelii GN=IDH3A PE=2 SV=1
Length = 366
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 2 PGGNVGADH-AIFEQ-GASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLE 59
P GN+GA+ AIFE +A ++ + + ANP ALLLS+ MMLRH+ A R+E
Sbjct: 274 PSGNIGANGVAIFESVHGTAPDIAGKDM-----ANPTALLLSAVMMLRHMGLFDHAARIE 328
Query: 60 TAVKRVISEGKCRTKDLGGSSTTQEIVDAV 89
A I +GK TKDLGG++ + + +
Sbjct: 329 AACFATIKDGKSLTKDLGGNAKCSDFTEEI 358
>sp|P50213|IDH3A_HUMAN Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Homo
sapiens GN=IDH3A PE=1 SV=1
Length = 366
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 2 PGGNVGADH-AIFEQ-GASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLE 59
P GN+GA+ AIFE +A ++ + + ANP ALLLS+ MMLRH+ A R+E
Sbjct: 274 PSGNIGANGVAIFESVHGTAPDIAGKDM-----ANPTALLLSAVMMLRHMGLFDHAARIE 328
Query: 60 TAVKRVISEGKCRTKDLGGSSTTQEIVDAV 89
A I +GK TKDLGG++ + + +
Sbjct: 329 AACFATIKDGKSLTKDLGGNAKCSDFTEEI 358
>sp|Q28480|IDH3A_MACFA Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial
(Fragment) OS=Macaca fascicularis GN=IDH3A PE=2 SV=2
Length = 347
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 2 PGGNVGADH-AIFEQ-GASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLE 59
P GN+GA+ AIFE +A ++ + + ANP ALLLS+ MMLRH+ A R+E
Sbjct: 255 PSGNIGANGVAIFESVHGTAPDIAGKDM-----ANPTALLLSAVMMLRHMGLFDHAARIE 309
Query: 60 TAVKRVISEGKCRTKDLGGSSTTQEIVDAV 89
A I +GK TKDLGG++ + + +
Sbjct: 310 AACFATIKDGKSLTKDLGGNAKCSDFTEEI 339
>sp|Q6TWC4|LEU3_SORMA 3-isopropylmalate dehydrogenase OS=Sordaria macrospora GN=LEU1 PE=3
SV=1
Length = 368
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 34 NPVALLLSSAMMLRH-LQFPSFADRLETAVKRVISEGKCRTKDLGGSSTTQEIVDAVIAA 92
NPV +LS AMMLR+ L P AD +E AVK I G +TKDLGGS+TT ++ +AV+A
Sbjct: 303 NPVGTILSVAMMLRYSLNLPKEADAVEAAVKAAIDNG-TKTKDLGGSATTSDMGNAVVAE 361
Query: 93 LE 94
LE
Sbjct: 362 LE 363
>sp|Q9HDQ5|LEU3_CANRU 3-isopropylmalate dehydrogenase OS=Candida rugosa GN=LEU2 PE=3 SV=1
Length = 359
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 32 KANPVALLLSSAMMLR-HLQFPSFADRLETAVKRVISEGKCRTKDLGGSSTTQEIVDAVI 90
K NP+A +LS+AMMLR L + ADR+E AV+ VI G T DLGGSS+T E+ DA++
Sbjct: 296 KVNPLACILSAAMMLRLSLDNAAAADRIEQAVREVIDSG-VATADLGGSSSTGEVGDAIV 354
Query: 91 AALE 94
ALE
Sbjct: 355 KALE 358
>sp|O29627|LEU3_ARCFU 3-isopropylmalate dehydrogenase OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=leuB PE=3 SV=1
Length = 326
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 9/95 (9%)
Query: 2 PGGNVGADHAIFE--QGASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLE 59
P NVG AIFE GA+ G + ANP A++L++ MMLRH + A ++E
Sbjct: 239 PSANVGERTAIFEPVHGAAFDIAG------KGIANPTAMILTACMMLRHFGYVEEAKKVE 292
Query: 60 TAVKRVISEGKCRTKDLGGSSTTQEIVDAVIAALE 94
AV++ I EGK +T DLGG+ T E + V + L+
Sbjct: 293 EAVEKTIKEGK-KTPDLGGNLKTMEFANEVASLLD 326
>sp|O77784|IDH3B_BOVIN Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Bos
taurus GN=IDH3B PE=2 SV=2
Length = 385
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 1 MPGGNVGADHAIFEQGASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLET 60
+PG + A++A+FE GA + V + ANP A+LLS++ MLRHL ++ +
Sbjct: 291 VPGESYSAEYAVFETGARHPFA---QAVGRNIANPTAMLLSASNMLRHLNLEHHSNMIAE 347
Query: 61 AVKRVISEGKCRTKDLGGSSTTQEIVDAVIAALE 94
AVK+VI GK RT+D+GG STT + + +VI L
Sbjct: 348 AVKKVIKVGKVRTRDMGGYSTTTDFIKSVIGHLH 381
>sp|Q28479|IDH3B_MACFA Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial
OS=Macaca fascicularis GN=IDH3B PE=2 SV=2
Length = 385
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 1 MPGGNVGADHAIFEQGASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLET 60
+PG + A++A+FE GA + V + ANP A+LLS++ MLRHL ++ +
Sbjct: 291 VPGESYSAEYAVFETGARHPFA---QAVGRNIANPTAMLLSASNMLRHLNLEYHSNMIAD 347
Query: 61 AVKRVISEGKCRTKDLGGSSTTQEIVDAVIAALE 94
AVK+VI GK RT+D+GG STT + + +VI L
Sbjct: 348 AVKKVIKVGKVRTRDMGGYSTTTDFIKSVIGHLH 381
>sp|P34738|LEU3_NEUCR 3-isopropylmalate dehydrogenase OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=leu-1 PE=3 SV=2
Length = 368
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 34 NPVALLLSSAMMLRH-LQFPSFADRLETAVKRVISEGKCRTKDLGGSSTTQEIVDAVIAA 92
NPV +LS AMMLR+ L P AD +E AVK I G +TKDLGG++TT ++ +AV+A
Sbjct: 303 NPVGTILSVAMMLRYSLNLPKEADAVEAAVKAAIDNG-TKTKDLGGNATTSDMGNAVVAE 361
Query: 93 LE 94
LE
Sbjct: 362 LE 363
>sp|O43837|IDH3B_HUMAN Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Homo
sapiens GN=IDH3B PE=1 SV=2
Length = 385
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 1 MPGGNVGADHAIFEQGASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLET 60
+PG + A++A+FE GA + V + ANP A+LLS++ MLRHL + +
Sbjct: 291 VPGESYSAEYAVFETGARHPFA---QAVGRNIANPTAMLLSASNMLRHLNLEYHSSMIAD 347
Query: 61 AVKRVISEGKCRTKDLGGSSTTQEIVDAVIAALE 94
AVK+VI GK RT+D+GG STT + + +VI L+
Sbjct: 348 AVKKVIKVGKVRTRDMGGYSTTTDFIKSVIGHLQ 381
>sp|Q9D6R2|IDH3A_MOUSE Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Mus
musculus GN=Idh3a PE=1 SV=1
Length = 366
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 2 PGGNVGADH-AIFEQ-GASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLE 59
P GN+GA+ AIFE +A ++ + + ANP ALLLS+ MMLRH+ A ++E
Sbjct: 274 PSGNIGANGVAIFESVHGTAPDIAGKDM-----ANPTALLLSAVMMLRHMGLFDHAAKIE 328
Query: 60 TAVKRVISEGKCRTKDLGGSSTTQEIVDAV 89
A I +GK TKDLGG++ + + +
Sbjct: 329 AACFATIKDGKSLTKDLGGNAKCSDFTEEI 358
>sp|Q4QQT5|IDHG2_RAT Probable isocitrate dehydrogenase [NAD] gamma 2, mitochondrial
OS=Rattus norvegicus PE=2 SV=1
Length = 395
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 1 MPGGNVGADHAIFEQGASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLET 60
+PG N G +AIFE G+ +G + L + ANPVA+LL+S +ML +L +A + +
Sbjct: 291 VPGANYGDSYAIFETGSK--EIGQD-LAHRNIANPVAMLLTSCIMLDYLDLQLYAAHIRS 347
Query: 61 AVKRVISEGKCRTKDLGGSSTTQEIVDAVI 90
AV + T D+GG TT +V+ ++
Sbjct: 348 AVMASLQNKSICTPDIGGQGTTAGVVEYIL 377
>sp|Q68FX0|IDH3B_RAT Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial
OS=Rattus norvegicus GN=Idh3B PE=1 SV=1
Length = 385
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 1 MPGGNVGADHAIFEQGASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLET 60
+PG + A++A+FE GA + V + ANP A+LLS++ MLRHL + +
Sbjct: 291 VPGESYSAEYAVFETGARHPFA---QAVGRNIANPTAMLLSASNMLRHLNLEYHSSMIAD 347
Query: 61 AVKRVISEGKCRTKDLGGSSTTQEIVDAVIAALE 94
AVK+VI GK RT+D+GG STT + + +VI L
Sbjct: 348 AVKKVIKVGKVRTRDMGGYSTTTDFIKSVIGHLH 381
>sp|Q5RBT4|IDH3B_PONAB Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Pongo
abelii GN=IDH3B PE=2 SV=1
Length = 385
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 1 MPGGNVGADHAIFEQGASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLET 60
+PG + A++A+FE GA + V + ANP A+LLS++ MLRHL + +
Sbjct: 291 VPGESYSAEYAVFETGARHPFA---QAVGRNIANPTAMLLSASNMLRHLNLEYHSSMIAD 347
Query: 61 AVKRVISEGKCRTKDLGGSSTTQEIVDAVIAALE 94
AVK+VI GK RT+D+GG STT + + +VI L
Sbjct: 348 AVKKVIKVGKVRTRDMGGYSTTTDFIKSVIGHLH 381
>sp|Q5NPQ9|LEU3_ZYMMO 3-isopropylmalate dehydrogenase OS=Zymomonas mobilis subsp. mobilis
(strain ATCC 31821 / ZM4 / CP4) GN=leuB PE=3 SV=1
Length = 349
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
Query: 32 KANPVALLLSSAMMLRH-LQFPSFADRLETAVKRVISEGKCRTKDLGGSSTTQEIVDAVI 90
KANP+A +LS AMMLR+ L+ + ADR+E AV + +G RT DLGG TT E+ +AV+
Sbjct: 287 KANPLATILSGAMMLRYSLKREADADRIEKAVSTALEKG-ARTADLGGKMTTSEMGNAVL 345
Query: 91 AAL 93
AAL
Sbjct: 346 AAL 348
>sp|Q99NA5|IDH3A_RAT Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial
OS=Rattus norvegicus GN=Idh3a PE=1 SV=1
Length = 366
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 7/88 (7%)
Query: 4 GNVGADH-AIFEQ-GASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLETA 61
GN+GA+ AIFE +A ++ + + ANP ALLLS+ MMLRH+ A ++E A
Sbjct: 276 GNIGANGVAIFESVHGTAPDIAGKDM-----ANPTALLLSAVMMLRHMGLFDHAAKIEAA 330
Query: 62 VKRVISEGKCRTKDLGGSSTTQEIVDAV 89
I +GK TKDLGG+S + + +
Sbjct: 331 CFATIKDGKSLTKDLGGNSKCSDFTEEI 358
>sp|Q48806|DLPA_LEGPH Protein DlpA OS=Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 / ATCC 33152 / DSM 7513) GN=dlpA PE=3
SV=1
Length = 615
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 2 PGGNVGADHAIFEQGASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLETA 61
P N+G + FE +G + + ANP A+ L+ +M+L H +P A ++ A
Sbjct: 280 PSANIGDKGSYFEPVHGSG-----PRIRKNCANPSAMFLTISMLLNHFGYPDRAKKIVNA 334
Query: 62 VKRVISEGKCRTKDLGGSSTTQEIVDAVI 90
V +VI E + T DLGG +TT ++ +AVI
Sbjct: 335 VMQVIKEKRFITYDLGGHATTTDMANAVI 363
>sp|Q8BPC6|IDHG2_MOUSE Probable isocitrate dehydrogenase [NAD] gamma 2, mitochondrial
OS=Mus musculus PE=1 SV=1
Length = 396
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 1 MPGGNVGADHAIFEQGASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLET 60
+PG N G +AIFE G+ +G + L + ANPVA+LL+S +ML +L +A + +
Sbjct: 291 VPGANYGDSYAIFEMGSK--EIGKD-LAHRNIANPVAMLLTSCIMLDYLDLQPYATHIRS 347
Query: 61 AVKRVISEGKCRTKDLGGSSTTQEIVDAVI 90
AV + T D+GG T V+ ++
Sbjct: 348 AVMASLQNKAVCTPDIGGQGNTASTVEYIL 377
>sp|O14104|LYS12_SCHPO Probable homoisocitrate dehydrogenase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=lys12 PE=1 SV=1
Length = 362
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 1 MPGGNVGADHAIFEQ-GASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLE 59
+P NVG + + E SA ++ + ANPVA S A+ML + A +
Sbjct: 272 VPSANVGDNFVMSEPVHGSAPDIAGRGI-----ANPVATFRSVALMLEFMGHQDAAADIY 326
Query: 60 TAVKRVISEGKCRTKDLGGSSTTQEIVDAVIAAL 93
TAV +V++EGK T DLGG S T EI DAV+A +
Sbjct: 327 TAVDKVLTEGKVLTPDLGGKSGTNEITDAVLANI 360
>sp|Q9P3Y0|LEU3_ZYGBA 3-isopropylmalate dehydrogenase OS=Zygosaccharomyces bailii GN=LEU2
PE=3 SV=1
Length = 362
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 32 KANPVALLLSSAMMLR-HLQFPSFADRLETAVKRVISEGKCRTKDLGGSSTTQEIVDAVI 90
K NPVA++LS+AMML+ L + LETAVK+V+ G RT DLGGS++T E+ DA+
Sbjct: 296 KVNPVAMILSAAMMLKLSLNMAKEGEALETAVKQVLDSG-VRTGDLGGSNSTSEVGDAIA 354
Query: 91 AALE 94
A++
Sbjct: 355 KAVK 358
>sp|P51553|IDH3G_HUMAN Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial OS=Homo
sapiens GN=IDH3G PE=1 SV=1
Length = 393
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 3 GGNVGADHAIFEQGASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLETAV 62
G N G +A+FE N G + + + ANP A LL+S MML HL+ S+A + AV
Sbjct: 296 GANYGHVYAVFETATR--NTG-KSIANKNIANPTATLLASCMMLDHLKLHSYATSIRKAV 352
Query: 63 KRVISEGKCRTKDLGGSSTTQEIVDAVI 90
+ T D+GG TT E + VI
Sbjct: 353 LASMDNENMHTPDIGGQGTTSEAIQDVI 380
>sp|Q58CP0|IDH3G_BOVIN Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial OS=Bos
taurus GN=IDH3G PE=2 SV=1
Length = 392
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 3 GGNVGADHAIFEQGASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLETAV 62
G N G +A+FE N G + + + ANP A LL+S MML HL+ S+A + AV
Sbjct: 295 GANYGHVYAVFETATR--NTG-KSIANKNIANPTATLLASCMMLDHLKLHSYATSIRKAV 351
Query: 63 KRVISEGKCRTKDLGGSSTTQEIVDAVI 90
+ T D+GG TT E + +I
Sbjct: 352 LASMDNENMHTPDIGGQGTTSEAIQDII 379
>sp|P41564|IDH3G_MACFA Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial
(Fragment) OS=Macaca fascicularis GN=IDH3G PE=2 SV=1
Length = 355
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 3 GGNVGADHAIFEQGASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLETAV 62
G N G +A+FE N G + + + ANP A LL+S MML HL+ S+A + AV
Sbjct: 258 GANYGHVYAVFETATR--NTG-KSIANKNIANPTATLLASCMMLDHLKLHSYATSIRKAV 314
Query: 63 KRVISEGKCRTKDLGGSSTTQEIVDAVI 90
+ T D+GG TT E + +I
Sbjct: 315 LASMDNENMHTPDIGGQGTTSEAIQDII 342
>sp|Q2G4X5|LEU3_NOVAD 3-isopropylmalate dehydrogenase OS=Novosphingobium aromaticivorans
(strain DSM 12444) GN=leuB PE=3 SV=2
Length = 352
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 33 ANPVALLLSSAMMLRH-LQFPSFADRLETAVKRVISEGKCRTKDLGGSSTTQEIVDAVIA 91
ANP+A +LS+AM+LRH L ADR+E AV + +++G +DLGG++ T EI DAV+A
Sbjct: 292 ANPMATILSAAMLLRHSLGLEVAADRIEAAVAKALADG-VLGRDLGGTAGTTEIGDAVLA 350
Query: 92 AL 93
L
Sbjct: 351 RL 352
>sp|P04173|LEU3_YEAST 3-isopropylmalate dehydrogenase OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=LEU2 PE=1 SV=4
Length = 364
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 23 GNEKLVEQKKANPVALLLSSAMMLR-HLQFPSFADRLETAVKRVISEGKCRTKDLGGSST 81
G+ + + K NP+A +LS+AMML+ L P +E AVK+V+ G RT DLGGS++
Sbjct: 289 GSAPDLPKNKVNPIATILSAAMMLKLSLNLPEEGKAIEDAVKKVLDAG-IRTGDLGGSNS 347
Query: 82 TQEIVDAV 89
T E+ DAV
Sbjct: 348 TTEVGDAV 355
>sp|P70404|IDHG1_MOUSE Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial
OS=Mus musculus GN=Idh3g PE=1 SV=1
Length = 393
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 3 GGNVGADHAIFEQGASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLETAV 62
G N G +A+FE N G + + + ANP A LL+S MML HL+ S+A + AV
Sbjct: 296 GANYGHVYAVFETATR--NTG-KSIANKNIANPTATLLASCMMLDHLKLHSYATSIRKAV 352
Query: 63 KRVISEGKCRTKDLGGSSTTQEIVDAVI 90
+ T D+GG TT + + +I
Sbjct: 353 LASMDNENMHTPDIGGQGTTSQAIQDII 380
>sp|P41565|IDHG1_RAT Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial
OS=Rattus norvegicus GN=Idh3g PE=2 SV=2
Length = 393
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 3 GGNVGADHAIFEQGASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLETAV 62
G N G +A+FE N G + + + ANP A LL+S MML HL+ S+A + AV
Sbjct: 296 GANYGHVYAVFETATR--NTG-KSIANKNIANPTATLLASCMMLDHLKLHSYATSIRKAV 352
Query: 63 KRVISEGKCRTKDLGGSSTTQEIVDAVI 90
+ T D+GG TT + + +I
Sbjct: 353 LASMDNENMHTPDIGGQGTTSQAIQDII 380
>sp|P87257|LEU3B_ASPNG 3-isopropylmalate dehydrogenase B OS=Aspergillus niger GN=leu2B
PE=2 SV=1
Length = 371
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 33 ANPVALLLSSAMMLRH-LQFPSFADRLETAVKRVISEGKCRTKDLGGSSTTQEIVDAVIA 91
ANP A++L ++M R+ + A ++E AV+ V+ G RT DLGG+S+TQE DAV+A
Sbjct: 307 ANPTAMILCVSLMFRYSFNMENEARQIEDAVRAVLDRG-LRTPDLGGNSSTQEFGDAVVA 365
Query: 92 ALE 94
AL+
Sbjct: 366 ALQ 368
>sp|P41926|LEU3_KODOH 3-isopropylmalate dehydrogenase OS=Kodamaea ohmeri GN=LEU2 PE=3
SV=1
Length = 368
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Query: 32 KANPVALLLSSAMMLR-HLQFPSFADRLETAVKRVISEGKCRTKDLGGSSTTQEIVDAVI 90
K NPVA +LS AMMLR L A+ LE AV +V+ G RT DL GSS+T+E+ DAV
Sbjct: 299 KVNPVATILSVAMMLRLSLDCLKEAEALEKAVGQVLDAG-IRTADLRGSSSTKEVGDAVA 357
Query: 91 AALE 94
AA+E
Sbjct: 358 AAVE 361
>sp|Q58130|LEU3_METJA 3-isopropylmalate/3-methylmalate dehydrogenase
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=leuB PE=1
SV=2
Length = 333
Score = 52.8 bits (125), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 2 PGGNVGADHAIFEQ-GASAGNVGNEKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLET 60
P N+G +H +FE SA ++ +K+ ANP A +LS+ +MLR+L AD++E
Sbjct: 244 PSANIGDEHGLFEPVHGSAPDIAGKKI-----ANPTATILSAVLMLRYLGEYEAADKVEK 298
Query: 61 AVKRVISEGKCRTKDLGGSSTTQEIVDAV 89
A++ V++ G T DLGG+ T E+ + V
Sbjct: 299 ALEEVLALG-LTTPDLGGNLNTFEMAEEV 326
>sp|Q96WI0|LEU3_ZYGRC 3-isopropylmalate dehydrogenase OS=Zygosaccharomyces rouxii (strain
ATCC 2623 / CBS 732 / NBRC 1130 / NCYC 568 / NRRL Y-229)
GN=LEU2 PE=3 SV=1
Length = 362
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Query: 32 KANPVALLLSSAMMLR-HLQFPSFADRLETAVKRVISEGKCRTKDLGGSSTTQEIVDAVI 90
K NP+A++LS+AMML+ L + +E AVK+V+ G RT DLGGS++T E+ DA+
Sbjct: 296 KVNPIAMILSAAMMLKLSLNLSKEGEAVEKAVKQVLDSG-VRTGDLGGSNSTSEVGDAIA 354
Query: 91 AALE 94
A++
Sbjct: 355 KAVK 358
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.353
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,866,473
Number of Sequences: 539616
Number of extensions: 978451
Number of successful extensions: 2287
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 204
Number of HSP's that attempted gapping in prelim test: 2055
Number of HSP's gapped (non-prelim): 329
length of query: 94
length of database: 191,569,459
effective HSP length: 64
effective length of query: 30
effective length of database: 157,034,035
effective search space: 4711021050
effective search space used: 4711021050
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)