BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034456
MAISTVSIHIFGDVPSSPLVGVLQDRVNNWRETALILTAILFPAAAIWFIGIFLHSVDKF
SEDNEDKVSRIERSKTTPLLEDEKAETTQACAEP

High Scoring Gene Products

Symbol, full name Information P value
AT5G64500 protein from Arabidopsis thaliana 2.2e-25
AT2G22730 protein from Arabidopsis thaliana 1.4e-17
AT5G65687 protein from Arabidopsis thaliana 2.7e-17

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034456
        (94 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2179401 - symbol:AT5G64500 "AT5G64500" species...   292  2.2e-25   1
TAIR|locus:2066045 - symbol:AT2G22730 "AT2G22730" species...   222  1.4e-17   1
TAIR|locus:504954889 - symbol:AT5G65687 "AT5G65687" speci...   219  2.7e-17   1


>TAIR|locus:2179401 [details] [associations]
            symbol:AT5G64500 "AT5G64500" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0055085 "transmembrane transport"
            evidence=IEA] [GO:0016020 "membrane" evidence=ISS] [GO:0006635
            "fatty acid beta-oxidation" evidence=RCA] [GO:0016126 "sterol
            biosynthetic process" evidence=RCA] [GO:0016558 "protein import
            into peroxisome matrix" evidence=RCA] [GO:0046520 "sphingoid
            biosynthetic process" evidence=RCA] InterPro:IPR011701 Pfam:PF07690
            GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0031902
            GO:GO:0005765 GO:GO:0006869 GO:GO:0055085 InterPro:IPR016196
            SUPFAM:SSF103473 InterPro:IPR020846 PROSITE:PS50850 EMBL:AB010076
            EMBL:AB025640 HOGENOM:HOG000265160 EMBL:AY034956 EMBL:BT001973
            IPI:IPI00518419 RefSeq:NP_201255.1 UniGene:At.19158
            ProteinModelPortal:Q9FLG8 SMR:Q9FLG8 PaxDb:Q9FLG8 PRIDE:Q9FLG8
            EnsemblPlants:AT5G64500.1 GeneID:836571 KEGG:ath:AT5G64500
            TAIR:At5g64500 eggNOG:NOG305600 InParanoid:Q9FLG8 OMA:PRIMERD
            PhylomeDB:Q9FLG8 ProtClustDB:CLSN2686269 Genevestigator:Q9FLG8
            Uniprot:Q9FLG8
        Length = 484

 Score = 292 (107.8 bits), Expect = 2.2e-25, P = 2.2e-25
 Identities = 59/83 (71%), Positives = 71/83 (85%)

Query:     1 MAISTVSIHIFGDVPSSPLVGVLQDRVNNWRETALILTAILFPAAAIWFIGIFLHSVDKF 60
             MA+STVSIHIFGDVPSSPLVGVLQD VNNWR T+L+LT +LFPAAAIW IGIFL+SVD++
Sbjct:   403 MAMSTVSIHIFGDVPSSPLVGVLQDYVNNWRVTSLVLTFVLFPAAAIWSIGIFLNSVDRY 462

Query:    61 SEDNE-DKVSRIERSKTTPLLED 82
             +ED+E D V+R   S   PLL++
Sbjct:   463 NEDSEPDAVTR--ESTAAPLLQE 483


>TAIR|locus:2066045 [details] [associations]
            symbol:AT2G22730 "AT2G22730" species:3702 "Arabidopsis
            thaliana" [GO:0005351 "sugar:hydrogen symporter activity"
            evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0015144
            "carbohydrate transmembrane transporter activity" evidence=ISS]
            [GO:0016020 "membrane" evidence=ISS] [GO:0016021 "integral to
            membrane" evidence=IEA] [GO:0055085 "transmembrane transport"
            evidence=IEA] InterPro:IPR011701 Pfam:PF07690 GO:GO:0016021
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006869 GO:GO:0005743
            GO:GO:0055085 InterPro:IPR016196 SUPFAM:SSF103473 EMBL:AC006340
            InterPro:IPR020846 PROSITE:PS50850 HOGENOM:HOG000265160
            IPI:IPI00536492 PIR:B84616 RefSeq:NP_179858.2 UniGene:At.39397
            ProteinModelPortal:F4IKF6 EnsemblPlants:AT2G22730.1 GeneID:816803
            KEGG:ath:AT2G22730 TAIR:At2g22730 eggNOG:NOG261370
            InParanoid:Q9ZQ41 OMA:QTVFISC Uniprot:F4IKF6
        Length = 510

 Score = 222 (83.2 bits), Expect = 1.4e-17, P = 1.4e-17
 Identities = 46/64 (71%), Positives = 55/64 (85%)

Query:     1 MAISTVSIHIFGDVPSSPLVGVLQDRVNNWRETALILTAILFPAAAIWFIG-IFLHSVDK 59
             MAISTV+IHIFGDVPSSPLVG++QD +N+WR+T LILT+ILF AAAIWFIG I L+S   
Sbjct:   428 MAISTVAIHIFGDVPSSPLVGIVQDHINSWRKTTLILTSILFLAAAIWFIGKINLNSF-- 485

Query:    60 FSED 63
             +S D
Sbjct:   486 YSND 489


>TAIR|locus:504954889 [details] [associations]
            symbol:AT5G65687 "AT5G65687" species:3702 "Arabidopsis
            thaliana" [GO:0005351 "sugar:hydrogen symporter activity"
            evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISM] [GO:0015144
            "carbohydrate transmembrane transporter activity" evidence=ISS]
            [GO:0016020 "membrane" evidence=ISS] [GO:0016021 "integral to
            membrane" evidence=IEA] [GO:0055085 "transmembrane transport"
            evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
            InterPro:IPR011701 Pfam:PF07690 GO:GO:0016021 GO:GO:0005886
            EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB010075 EMBL:AL021684
            GO:GO:0031902 GO:GO:0005765 GO:GO:0006869 GO:GO:0055085
            eggNOG:COG0477 InterPro:IPR016196 SUPFAM:SSF103473
            InterPro:IPR020846 PROSITE:PS50850 EMBL:BT011621 EMBL:BT014809
            IPI:IPI00539504 IPI:IPI00548188 PIR:T05899 RefSeq:NP_680469.1
            UniGene:At.45472 ProteinModelPortal:Q6NMN6 PRIDE:Q6NMN6
            EnsemblPlants:AT5G65687.1 GeneID:836697 KEGG:ath:AT5G65687
            TAIR:At5g65687 HOGENOM:HOG000265160 InParanoid:Q6NMN6 OMA:FHANDAQ
            PhylomeDB:Q6NMN6 Genevestigator:Q6NMN6 Uniprot:Q6NMN6
        Length = 492

 Score = 219 (82.2 bits), Expect = 2.7e-17, P = 2.7e-17
 Identities = 47/79 (59%), Positives = 60/79 (75%)

Query:     1 MAISTVSIHIFGDVPSSPLVGVLQDRVNNWRETALILTAILFPAAAIWFIGIFLHSVDK- 59
             MA STV IHI GDVPSSPL G +QD + NWR++ LI+T+ILF AA IW IGIF++SVD+ 
Sbjct:   409 MASSTVLIHILGDVPSSPLYGKMQDHLKNWRKSTLIITSILFLAAIIWGIGIFMNSVDRS 468

Query:    60 --FSEDNEDKVSRIERSKT 76
                SED+E +  ++E SKT
Sbjct:   469 NEVSEDDEVEEDKLE-SKT 486


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.133   0.388    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       94        94   0.00091  102 3  11 22  0.36    30
                                                     29  0.42    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  558 (59 KB)
  Total size of DFA:  115 KB (2076 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.92u 0.13s 11.05t   Elapsed:  00:00:00
  Total cpu time:  10.92u 0.13s 11.05t   Elapsed:  00:00:00
  Start:  Mon May 20 16:48:39 2013   End:  Mon May 20 16:48:39 2013

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