BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034458
MVLETVLSSPHRRSSSFKRQFTKDEFGSWSTLAERHRFLLTALVLLGLLCTIYLYFAVTL
GAATSCSGLIGTEKALCHLEQAKASVAKGKLKFL

High Scoring Gene Products

Symbol, full name Information P value
AT1G16170 protein from Arabidopsis thaliana 9.2e-20
AT1G79660 protein from Arabidopsis thaliana 8.3e-19

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034458
        (94 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2200482 - symbol:AT1G16170 "AT1G16170" species...   235  9.2e-20   1
TAIR|locus:2019888 - symbol:AT1G79660 "AT1G79660" species...   226  8.3e-19   1


>TAIR|locus:2200482 [details] [associations]
            symbol:AT1G16170 "AT1G16170" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 EMBL:AF370249 EMBL:AY063065
            EMBL:AY087170 IPI:IPI00535917 RefSeq:NP_563992.1 UniGene:At.11864
            PRIDE:Q94K72 EnsemblPlants:AT1G16170.1 GeneID:838186
            KEGG:ath:AT1G16170 eggNOG:NOG260207 OMA:DSLSSPH
            ProtClustDB:CLSN2687824 ArrayExpress:Q94K72 Genevestigator:Q94K72
            Uniprot:Q94K72
        Length = 92

 Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
 Identities = 48/94 (51%), Positives = 64/94 (68%)

Query:     1 MVLETVLSSPHRRSSSFKRQFTKDEFGSWSTLAERHRFXXXXXXXXXXXCTIYLYFAVTL 60
             MVL+ ++SSP RR    K+Q+  DE GSWSTL +RH++           CT+YLYFAVTL
Sbjct:     1 MVLDGLVSSPSRRQQCLKKQW--DELGSWSTLIQRHQYLLTALALLAFLCTVYLYFAVTL 58

Query:    61 GAA-TSCSGLIGTEKALCHLEQAKASVAKGKLKF 93
             GA  +SC GL G +KA+C L+  +A ++KGKLKF
Sbjct:    59 GARHSSCYGLTGKDKAMCQLQLVQA-LSKGKLKF 91


>TAIR|locus:2019888 [details] [associations]
            symbol:AT1G79660 "AT1G79660" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC010793
            UniGene:At.34070 UniGene:At.68567 ProtClustDB:CLSN2687824
            EMBL:AY052243 EMBL:AY060515 IPI:IPI00536840 RefSeq:NP_565217.1
            ProMEX:Q9MA09 EnsemblPlants:AT1G79660.1 GeneID:844305
            KEGG:ath:AT1G79660 TAIR:At1g79660 eggNOG:NOG285141
            HOGENOM:HOG000077700 InParanoid:Q9MA09 OMA:RFLLTAM PhylomeDB:Q9MA09
            Genevestigator:Q9MA09 Uniprot:Q9MA09
        Length = 93

 Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
 Identities = 46/94 (48%), Positives = 62/94 (65%)

Query:     1 MVLETVLSSPHRRSSSFKRQFTKDEFGSWSTLAERHRFXXXXXXXXXXXCTIYLYFAVTL 60
             MVL+ ++SSP RR  + K+Q+  D+ GS ST+ +RHRF           CTIY+YFAVTL
Sbjct:     1 MVLDGIVSSPLRRPHALKKQW--DDLGSCSTVVQRHRFLLTAMLLLAFLCTIYIYFAVTL 58

Query:    61 GAA-TSCSGLIGTEKALCHLEQAKASVAKGKLKF 93
             GA    CSG+ G +KA+C +E  +AS + GKLKF
Sbjct:    59 GARHLLCSGMTGKDKAMCQMEHIQASFSNGKLKF 92


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.131   0.390    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       94        83   0.00091  102 3  11 22  0.37    29
                                                     29  0.44    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  520 (55 KB)
  Total size of DFA:  99 KB (2070 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  6.84u 0.16s 7.00t   Elapsed:  00:00:01
  Total cpu time:  6.84u 0.16s 7.00t   Elapsed:  00:00:01
  Start:  Thu May  9 16:03:38 2013   End:  Thu May  9 16:03:39 2013

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