BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034461
(94 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SUI0|RC24_ARATH UPF0057 membrane protein At4g30660 OS=Arabidopsis thaliana
GN=At4g30660 PE=2 SV=1
Length = 74
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/71 (80%), Positives = 63/71 (88%)
Query: 1 MPSCCEICCEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIVFVDR 60
MPS CEI CEI+IAILLPPLGVC + GCCTVEF ICL+LTILGYVPGIIYA+Y IVF R
Sbjct: 1 MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60
Query: 61 DEYFDEYRRPL 71
+EYFDEYRRP+
Sbjct: 61 EEYFDEYRRPI 71
>sp|O82232|RC22_ARATH UPF0057 membrane protein At2g24040 OS=Arabidopsis thaliana
GN=At2g24040 PE=3 SV=1
Length = 75
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/71 (78%), Positives = 64/71 (90%)
Query: 1 MPSCCEICCEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIVFVDR 60
M S CE+CCEI IAILLPP+GVCL+HGCCTVEF ICL+LT LGY+PGIIYA+YAI F+ R
Sbjct: 1 MASSCELCCEIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAICFLHR 60
Query: 61 DEYFDEYRRPL 71
DEYFDEYRRP+
Sbjct: 61 DEYFDEYRRPI 71
>sp|Q9M095|RC23_ARATH UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana
GN=At4g30650 PE=3 SV=1
Length = 73
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/72 (72%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
Query: 1 MPSCCEICCEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIVFVDR 60
M S E+ CEILIAILLPPLGVCLK GCCTVEF ICL+LTILGY+PGIIYALY IVF +R
Sbjct: 1 MASNMEVFCEILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIVFQNR 60
Query: 61 DEYFDEYRRPLK 72
E E PL
Sbjct: 61 -EGSTELGAPLN 71
>sp|Q9LRI7|OSR8_ORYSJ Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica GN=OSR8
PE=3 SV=1
Length = 72
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 51/58 (87%)
Query: 10 EILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIVFVDRDEYFDEY 67
EIL+AI+LPPLGV L+ GCC++EFCICLLLTILGYVPGIIYA+Y +V +D D+Y EY
Sbjct: 11 EILLAIILPPLGVFLRFGCCSMEFCICLLLTILGYVPGIIYAVYVLVALDSDQYQREY 68
>sp|Q0DKW8|LTI6B_ORYSJ Hydrophobic protein LTI6B OS=Oryza sativa subsp. japonica
GN=LTI6B PE=2 SV=1
Length = 55
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 8 CCEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAI 55
C +ILIAI+LPPLGV LK GC EF ICLLLT LGY+PGIIYA+YAI
Sbjct: 7 CIDILIAIILPPLGVFLKFGCGH-EFWICLLLTFLGYIPGIIYAIYAI 53
>sp|A2Y075|LTI6B_ORYSI Hydrophobic protein LTI6B OS=Oryza sativa subsp. indica GN=LTI6B
PE=3 SV=2
Length = 55
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 8 CCEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAI 55
C +ILIAI+LPPLGV LK GC EF ICLLLT LGY+PGIIYA+YAI
Sbjct: 7 CIDILIAIILPPLGVFLKFGCGH-EFWICLLLTFLGYIPGIIYAIYAI 53
>sp|Q9ZNQ7|RCI2A_ARATH Hydrophobic protein RCI2A OS=Arabidopsis thaliana GN=RCI2A PE=2
SV=1
Length = 54
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 40/46 (86%), Gaps = 1/46 (2%)
Query: 10 EILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAI 55
+I+IAILLPPLGV L+ GC VEF ICL+LT+LGY+PGIIYA+Y +
Sbjct: 8 DIIIAILLPPLGVFLRFGC-GVEFWICLVLTLLGYIPGIIYAIYVL 52
>sp|Q9ZNS6|RCI2B_ARATH Hydrophobic protein RCI2B OS=Arabidopsis thaliana GN=RCI2B PE=2
SV=1
Length = 54
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 39/46 (84%), Gaps = 1/46 (2%)
Query: 10 EILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAI 55
EI++AI+LPPLGV LK GC VEF ICL+LT+ GY+PGI+YALY I
Sbjct: 8 EIILAIILPPLGVFLKFGC-KVEFWICLILTLFGYLPGILYALYII 52
>sp|Q9ARD5|LT02_HORVU Low temperature-induced protein lt101.2 OS=Hordeum vulgare
GN=LT101.2 PE=2 SV=1
Length = 54
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 41/47 (87%), Gaps = 1/47 (2%)
Query: 10 EILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIV 56
E+++AI+LPP+GV L++G VEF ICLLLT+LGY+PGIIYA+Y +V
Sbjct: 8 EVILAIILPPVGVFLRYGLA-VEFWICLLLTLLGYIPGIIYAVYVLV 53
>sp|Q8H5T6|LTI6A_ORYSJ Hydrophobic protein LTI6A OS=Oryza sativa subsp. japonica
GN=LTI6A PE=2 SV=1
Length = 56
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 1 MPSCCEICCEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAI 55
M C +I++AI+LPPLGV K GC +EF ICLLLT GY+PGIIYA++ I
Sbjct: 1 MADSTATCIDIILAIILPPLGVFFKFGC-GIEFWICLLLTFFGYLPGIIYAVWVI 54
>sp|P68179|LT01_HORVU Low temperature-induced protein lt101.1 OS=Hordeum vulgare
GN=LT101.1 PE=2 SV=1
Length = 54
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 8 CCEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIV 56
E+++AI+LPP+GV L++ VEF ICLLLTILGY+PGIIYA+Y +V
Sbjct: 6 VLEVILAIILPPVGVFLRYKL-GVEFWICLLLTILGYIPGIIYAVYVLV 53
>sp|P68178|ESI3_LOPEL Salt stress-induced hydrophobic peptide ESI3 OS=Lophopyrum
elongatum GN=ESI3 PE=2 SV=1
Length = 54
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 8 CCEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIV 56
E+++AI+LPP+GV L++ VEF ICLLLTILGY+PGIIYA+Y +V
Sbjct: 6 VLEVILAIILPPVGVFLRYKL-GVEFWICLLLTILGYIPGIIYAVYVLV 53
>sp|Q4HXT6|PMP3_GIBZE Plasma membrane proteolipid 3 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=PMP3 PE=3
SV=2
Length = 57
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 1 MPSCCEICCEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIV 56
MP C+I++AI+LPP+GV L+ GC +F I +LLTILGY+PGII+ALY I+
Sbjct: 1 MPFTASDICKIILAIILPPVGVFLERGCGA-DFFINILLTILGYIPGIIHALYIIL 55
>sp|Q871V2|PMP3_NEUCR Plasma membrane proteolipid 3 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=pmp-3 PE=3 SV=1
Length = 57
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 9 CEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIV 56
C+I++A++LPPLGV + GC + I +LLTILGY+PGI++ALY I+
Sbjct: 9 CKIIVAVILPPLGVFFERGCGA-DLFINILLTILGYLPGIVHALYIIL 55
>sp|Q4WYA5|PMP3_ASPFU Plasma membrane proteolipid 3 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=pmp3 PE=3 SV=1
Length = 57
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 1 MPSCCEICCEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAI 55
MP C+IL AI+LPPLGV L+ G C + I + LTILG++PGII+A Y I
Sbjct: 1 MPFTASDICKILFAIILPPLGVFLERG-CGADLLINICLTILGWIPGIIHAFYII 54
>sp|Q22701|YCU4_CAEEL UPF0057 membrane protein T23F2.4 OS=Caenorhabditis elegans
GN=T23F2.4 PE=3 SV=2
Length = 57
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Query: 10 EILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIV 56
+ L A+LLPP+GV L+ GC T IC+LLTILGY+PGIIYA Y I+
Sbjct: 10 KFLFALLLPPVGVFLEKGC-THHLAICILLTILGYIPGIIYACYIIL 55
>sp|Q22700|YCU3_CAEEL UPF0057 membrane protein T23F2.3 OS=Caenorhabditis elegans
GN=T23F2.3 PE=3 SV=1
Length = 57
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Query: 14 AILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIV 56
A+LLPP+GV L+ GC IC+LLTILGY+PGIIYA Y I+
Sbjct: 14 AVLLPPIGVFLEKGC-DYHLAICILLTILGYIPGIIYACYVIL 55
>sp|Q6BVN0|PMP3_DEBHA Plasma membrane proteolipid 3 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=PMP3 PE=3 SV=1
Length = 57
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%), Gaps = 1/40 (2%)
Query: 17 LPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIV 56
LPPLGV L+ GC + F I ++LTILGY+PGII+ALY I+
Sbjct: 17 LPPLGVFLERGCAS-SFWINIVLTILGYIPGIIHALYVIL 55
>sp|Q9FE70|RC21_ARATH UPF0057 membrane protein At1g57550 OS=Arabidopsis thaliana
GN=At1g57550 PE=2 SV=1
Length = 52
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
Query: 10 EILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAI 55
E+L AI +PP+GV L++G +EF +CLLLT+ ++PG+IYA+Y +
Sbjct: 6 EVLCAIFIPPVGVFLRYGL-GLEFWVCLLLTLFAFIPGLIYAIYVL 50
>sp|Q22702|YCU5_CAEEL UPF0057 membrane protein T23F2.5 OS=Caenorhabditis elegans
GN=T23F2.5 PE=3 SV=1
Length = 57
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 10 EILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIV 56
+ L A+LLPP+GV L+ GC T I +LLTILGY+PGII+A Y I+
Sbjct: 10 KFLCALLLPPIGVWLEKGC-TYHLAINILLTILGYIPGIIHACYVIL 55
>sp|P0AE42|YQAE_ECOLI UPF0057 membrane protein YqaE OS=Escherichia coli (strain K12)
GN=yqaE PE=3 SV=1
Length = 52
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 9 CEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALY 53
I+I I+LPPLGV L G F I +LLT+LGY+PG+I+A +
Sbjct: 4 WRIVITIILPPLGVLLGKGFGW-AFIINILLTLLGYIPGLIHAFW 47
>sp|P0AE43|YQAE_ECOL6 UPF0057 membrane protein YqaE OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=yqaE PE=3 SV=1
Length = 52
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 9 CEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALY 53
I+I I+LPPLGV L G F I +LLT+LGY+PG+I+A +
Sbjct: 4 WRIVITIILPPLGVLLGKGFGW-AFIINILLTLLGYIPGLIHAFW 47
>sp|P0AE44|YQAE_ECO57 UPF0057 membrane protein YqaE OS=Escherichia coli O157:H7 GN=yqaE
PE=3 SV=1
Length = 52
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 9 CEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALY 53
I+I I+LPPLGV L G F I +LLT+LGY+PG+I+A +
Sbjct: 4 WRIVITIILPPLGVLLGKGFGW-AFIINILLTLLGYIPGLIHAFW 47
>sp|Q9C1W4|PMP3_SCHPO Plasma membrane proteolipid 3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pmp3 PE=3 SV=2
Length = 57
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 10 EILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIV 56
+++ AI+LPPLGV L+ GC + I +LL LGYVPGII+ALY I+
Sbjct: 10 KVIFAIILPPLGVFLERGCGA-DVIINILLCCLGYVPGIIHALYIIL 55
>sp|Q9Y068|RIC1_PHYIN Protein Ric1 OS=Phytophthora infestans GN=RIC1 PE=3 SV=1
Length = 57
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 1 MPSCCEICCEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIV 56
MP C ++ ++++PP+GV + GC T + I LLT+LGY+PG+I+A+Y ++
Sbjct: 1 MPITCGDIPRLICSVIIPPVGVFFQVGC-TKDLAINCLLTVLGYIPGVIHAVYILI 55
>sp|P0CS18|PMP3_CRYNJ Plasma membrane proteolipid 3 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=PMP3 PE=3 SV=1
Length = 57
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 1 MPSCCEICCEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIV 56
M C +I++AI+LPPLGV L+ GC + I +LLTILGY+PGII+ALY I+
Sbjct: 1 MAFTCSDIFKIILAIILPPLGVFLERGCGA-DLLINILLTILGYIPGIIHALYIIL 55
>sp|P0CS19|PMP3_CRYNB Plasma membrane proteolipid 3 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=PMP3 PE=3
SV=1
Length = 57
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 1 MPSCCEICCEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIV 56
M C +I++AI+LPPLGV L+ GC + I +LLTILGY+PGII+ALY I+
Sbjct: 1 MAFTCSDIFKIILAIILPPLGVFLERGCGA-DLLINILLTILGYIPGIIHALYIIL 55
>sp|P34655|YOT0_CAEEL UPF0057 membrane protein ZK632.10 OS=Caenorhabditis elegans
GN=ZK632.10 PE=3 SV=2
Length = 80
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 9 CEILIAIL---LPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIVFVDRDEYFD 65
C+IL+AIL LPP+ V L GC + I +LLT LG +PGII+A Y I+ ++ +
Sbjct: 2 CQILLAILAIFLPPIAVLLDVGC-NCDLLINILLTCLGIIPGIIHAWYIILCKEKTVVQN 60
Query: 66 EYRR 69
Y +
Sbjct: 61 IYVQ 64
>sp|Q9I5W9|Y567_PSEAE UPF0057 membrane protein PA0567 OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA0567
PE=3 SV=1
Length = 52
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 18 PPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAI 55
PPLGV L+ G F + +LLT+LGY+PGI++A+Y I
Sbjct: 13 PPLGVFLQVGFGG-AFWLNILLTLLGYIPGIVHAVYII 49
>sp|P74805|Y1169_SYNY3 UPF0057 membrane protein ssr1169 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=ssr1169 PE=3 SV=2
Length = 54
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 34/48 (70%), Gaps = 2/48 (4%)
Query: 9 CEILIAILLPPLGVCLKHGCCTVEFCICLLLTILG-YVPGIIYALYAI 55
+I+ AILLPPLGV L+ G +F I LLLTI G Y+ G+++A++ I
Sbjct: 4 VKIICAILLPPLGVFLQVGIGK-DFWINLLLTIFGLYILGLVHAIWVI 50
>sp|Q75C38|PMP3_ASHGO Plasma membrane proteolipid 3 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=PMP3
PE=3 SV=1
Length = 55
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 8 CCEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAI 55
++IAI LPP+ V L G VE + LLLTI + PG++YALY +
Sbjct: 6 VVNVIIAIFLPPVAVFLARGWG-VECIVDLLLTIFFFFPGMLYALYIV 52
>sp|Q07549|SNA4_YEAST Protein SNA4 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SNA4 PE=1 SV=1
Length = 140
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 4 CCEICCEIL--IAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIVFVD 59
CC + IL +A PP V L+ G C+ +F + +LLT+LG++PG+++A Y I
Sbjct: 7 CCTVSDFILYIVAFFFPPAAVLLRSGPCSSDFLLNVLLTLLGFLPGMLHAFYYITITS 64
>sp|P87284|PMP3_YEAST Plasma membrane proteolipid 3 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PMP3 PE=1 SV=1
Length = 55
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 10 EILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIV 56
I++++ LPP+ V L G T + + ++LTIL + PG++YALY ++
Sbjct: 8 NIILSLFLPPVAVFLARGWGT-DCIVDIILTILAWFPGMLYALYIVL 53
>sp|Q17638|YAM5_CAEEL UPF0057 membrane protein C04G6.5 OS=Caenorhabditis elegans
GN=C04G6.5 PE=3 SV=1
Length = 59
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 31/53 (58%)
Query: 1 MPSCCEICCEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALY 53
M + ++ E+++ I LPPL + C + I ++ +L ++PGI+YA+Y
Sbjct: 1 MATDADVIIEVILCIFLPPLAIWWHTKECDINVLIDIIFCLLFWLPGILYAVY 53
>sp|Q9P824|PMP3_CANAX Plasma membrane proteolipid 3 homolog OS=Candida albicans GN=PMP3
PE=3 SV=1
Length = 55
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 6 EICCEILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIV 56
E E++IAI LPP+ V +K G T I L+L I + P I++ALY ++
Sbjct: 4 EKIIEVIIAIFLPPVAVFMKCGATT-PLWINLVLCIFIWFPAILHALYVVL 53
>sp|O74837|PMP31_SCHPO Plasma membrane proteolipid 31 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pmp31 PE=1 SV=2
Length = 109
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 11 ILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALYAIVFVDRDEYFDEYRRP 70
I+++ +P + V ++ G CT +F I + L LG +PGII+A+Y ++ R D P
Sbjct: 12 IVLSFFVPFIVVGIRRGFCTADFLINICLCALG-IPGIIHAIYIVIKYPRTVRLDIENSP 70
>sp|Q20516|YV31_CAEEL UPF0057 membrane protein F47B7.1 OS=Caenorhabditis elegans
GN=F47B7.1 PE=3 SV=1
Length = 59
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 27/44 (61%)
Query: 10 EILIAILLPPLGVCLKHGCCTVEFCICLLLTILGYVPGIIYALY 53
E+++AI LPPL + + C + + ++L +VP +I+AL+
Sbjct: 10 ELILAIFLPPLAIFIHGNDCNMHVAVNIILCFFFFVPAVIHALW 53
>sp|Q9HWC5|RL11_PSEAE 50S ribosomal protein L11 OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=rplK PE=3
SV=1
Length = 143
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 18 PPLGVCL-KHGCCTVEFCICLLLTILGYVPGIIYALYAIVFVDRDEYFDEYRRPLKV 73
PP+G L +HG +EFC G PG+ + V+ DR F+ P V
Sbjct: 22 PPVGPALGQHGVNIMEFCKAFNAKTQGQEPGLPTPVIITVYSDRSFTFETKSTPAAV 78
>sp|Q02T91|RL11_PSEAB 50S ribosomal protein L11 OS=Pseudomonas aeruginosa (strain
UCBPP-PA14) GN=rplK PE=3 SV=1
Length = 143
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 18 PPLGVCL-KHGCCTVEFCICLLLTILGYVPGIIYALYAIVFVDRDEYFDEYRRPLKV 73
PP+G L +HG +EFC G PG+ + V+ DR F+ P V
Sbjct: 22 PPVGPALGQHGVNIMEFCKAFNAKTQGQEPGLPTPVIITVYSDRSFTFETKSTPAAV 78
>sp|B7V633|RL11_PSEA8 50S ribosomal protein L11 OS=Pseudomonas aeruginosa (strain
LESB58) GN=rplK PE=3 SV=1
Length = 143
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 18 PPLGVCL-KHGCCTVEFCICLLLTILGYVPGIIYALYAIVFVDRDEYFDEYRRPLKV 73
PP+G L +HG +EFC G PG+ + V+ DR F+ P V
Sbjct: 22 PPVGPALGQHGVNIMEFCKAFNAKTQGQEPGLPTPVIITVYSDRSFTFETKSTPAAV 78
>sp|A6UZH7|RL11_PSEA7 50S ribosomal protein L11 OS=Pseudomonas aeruginosa (strain PA7)
GN=rplK PE=3 SV=1
Length = 143
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 18 PPLGVCL-KHGCCTVEFCICLLLTILGYVPGIIYALYAIVFVDRDEYFDEYRRPLKV 73
PP+G L +HG +EFC G PG+ + V+ DR F+ P V
Sbjct: 22 PPVGPALGQHGVNIMEFCKAFNAKTQGQEPGLPTPVIITVYSDRSFTFETKSTPAAV 78
>sp|A4XZA1|RL11_PSEMY 50S ribosomal protein L11 OS=Pseudomonas mendocina (strain ymp)
GN=rplK PE=3 SV=1
Length = 143
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 18 PPLGVCL-KHGCCTVEFCICLLLTILGYVPGIIYALYAIVFVDRDEYFDEYRRPLKV 73
PP+G L +HG +EFC G PG+ + V+ DR F+ P V
Sbjct: 22 PPVGPALGQHGVNIMEFCKAFNAKTQGMEPGLPTPVIITVYSDRSFTFETKSTPASV 78
>sp|Q1IFX7|RL11_PSEE4 50S ribosomal protein L11 OS=Pseudomonas entomophila (strain L48)
GN=rplK PE=3 SV=1
Length = 143
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 18 PPLGVCL-KHGCCTVEFCICLLLTILGYVPGIIYALYAIVFVDRDEYFDEYRRPLKV 73
PP+G L +HG +EFC G PG+ + V+ DR F+ P V
Sbjct: 22 PPVGPALGQHGVNIMEFCKAFNARTQGQEPGLPTPVIITVYSDRSFTFETKSTPASV 78
>sp|C1DKK1|RL11_AZOVD 50S ribosomal protein L11 OS=Azotobacter vinelandii (strain DJ /
ATCC BAA-1303) GN=rplK PE=3 SV=1
Length = 143
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 18 PPLGVCL-KHGCCTVEFCICLLLTILGYVPGIIYALYAIVFVDRDEYFDEYRRPLKV 73
PP+G L +HG +EFC G PG+ + V+ DR F+ P V
Sbjct: 22 PPVGPALGQHGVNIMEFCKAFNARTQGMEPGLPTPVIITVYSDRSFTFETKSTPASV 78
>sp|A4VHL9|RL11_PSEU5 50S ribosomal protein L11 OS=Pseudomonas stutzeri (strain A1501)
GN=rplK PE=3 SV=1
Length = 143
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 18 PPLGVCL-KHGCCTVEFCICLLLTILGYVPGIIYALYAIVFVDRDEYFDEYRRPLKV 73
PP+G L +HG +EFC G PG+ + V+ DR F+ P V
Sbjct: 22 PPVGPALGQHGVNIMEFCKAFNARTQGQEPGLPTPVIITVYSDRSFTFETKSTPAAV 78
>sp|Q48D25|RL11_PSE14 50S ribosomal protein L11 OS=Pseudomonas syringae pv.
phaseolicola (strain 1448A / Race 6) GN=rplK PE=3 SV=1
Length = 143
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 18 PPLGVCL-KHGCCTVEFCICLLLTILGYVPGIIYALYAIVFVDRDEYFDEYRRPLKV 73
PP+G L +HG +EFC G PG+ + V+ DR F+ P V
Sbjct: 22 PPVGPALGQHGVNIMEFCKAFNARTQGIEPGLPTPVIITVYSDRSFTFETKSTPASV 78
>sp|Q2HAR0|PMP3_CHAGB Plasma membrane proteolipid 3 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=PMP3 PE=3 SV=1
Length = 53
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 1 MPSCCEICCEILIAILLPPLGVCLKHGCCT 30
MP C+I+ A++LPPLGV L+ GC +
Sbjct: 1 MPFTASDICKIIFAVILPPLGVFLERGCNS 30
>sp|C3K2Y7|RL11_PSEFS 50S ribosomal protein L11 OS=Pseudomonas fluorescens (strain
SBW25) GN=rplK PE=3 SV=1
Length = 143
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 18 PPLGVCL-KHGCCTVEFCICLLLTILGYVPGIIYALYAIVFVDRDEYFDEYRRPLKV 73
PP+G L +HG +EFC G PG+ + V+ DR F+ P V
Sbjct: 22 PPVGPALGQHGVNIMEFCKAFNARTQGLEPGLPTPVIITVYSDRSFTFETKSTPASV 78
>sp|Q4K522|RL11_PSEF5 50S ribosomal protein L11 OS=Pseudomonas fluorescens (strain Pf-5
/ ATCC BAA-477) GN=rplK PE=3 SV=1
Length = 143
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 18 PPLGVCL-KHGCCTVEFCICLLLTILGYVPGIIYALYAIVFVDRDEYFDEYRRPLKV 73
PP+G L +HG +EFC G PG+ + V+ DR F+ P V
Sbjct: 22 PPVGPALGQHGVNIMEFCKAFNARTQGLEPGLPTPVIITVYSDRSFTFETKSTPASV 78
>sp|Q4ZMN3|RL11_PSEU2 50S ribosomal protein L11 OS=Pseudomonas syringae pv. syringae
(strain B728a) GN=rplK PE=3 SV=1
Length = 143
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 18 PPLGVCL-KHGCCTVEFCICLLLTILGYVPGIIYALYAIVFVDRDEYFDEYRRPLKV 73
PP+G L +HG +EFC G PG+ + V+ DR F+ P V
Sbjct: 22 PPVGPALGQHGVNIMEFCKAFNARTQGIEPGLPTPVIITVYSDRSFTFETKSTPASV 78
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.335 0.151 0.528
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,733,641
Number of Sequences: 539616
Number of extensions: 1317854
Number of successful extensions: 4333
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 4267
Number of HSP's gapped (non-prelim): 60
length of query: 94
length of database: 191,569,459
effective HSP length: 64
effective length of query: 30
effective length of database: 157,034,035
effective search space: 4711021050
effective search space used: 4711021050
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 55 (25.8 bits)