BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034463
(94 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|57900175|dbj|BAD88260.1| putative small nuclear ribonucleoprotein [Oryza sativa Japonica
Group]
Length = 431
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 60/64 (93%), Positives = 63/64 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRVRAFD HCNMVLENVREMWTE+PKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL
Sbjct: 368 KLLGRVRAFDSHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 427
Query: 91 RNPK 94
+NPK
Sbjct: 428 KNPK 431
>gi|297604251|ref|NP_001055168.2| Os05g0314100 [Oryza sativa Japonica Group]
gi|54291778|gb|AAV32147.1| putative small nuclear ribonucleoprotein D2 [Oryza sativa Japonica
Group]
gi|215768148|dbj|BAH00377.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768714|dbj|BAH00943.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218196532|gb|EEC78959.1| hypothetical protein OsI_19425 [Oryza sativa Indica Group]
gi|222631079|gb|EEE63211.1| hypothetical protein OsJ_18021 [Oryza sativa Japonica Group]
gi|255676234|dbj|BAF17082.2| Os05g0314100 [Oryza sativa Japonica Group]
Length = 105
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/64 (96%), Positives = 64/64 (100%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRVRAFDRHCNMVLENVREMWTE+PKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL
Sbjct: 42 KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 101
Query: 91 RNPK 94
RNPK
Sbjct: 102 RNPK 105
>gi|212722184|ref|NP_001131740.1| uncharacterized protein LOC100193106 [Zea mays]
gi|194692396|gb|ACF80282.1| unknown [Zea mays]
gi|195629728|gb|ACG36505.1| small nuclear ribonucleoprotein Sm D2 [Zea mays]
gi|413918934|gb|AFW58866.1| Small nuclear ribonucleoprotein Sm D2 isoform 1 [Zea mays]
gi|413918935|gb|AFW58867.1| Small nuclear ribonucleoprotein Sm D2 isoform 2 [Zea mays]
Length = 105
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/64 (96%), Positives = 64/64 (100%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRVRAFDRHCNMVLENVREMWTE+PKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL
Sbjct: 42 KLLGRVRAFDRHCNMVLENVREMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 101
Query: 91 RNPK 94
RNPK
Sbjct: 102 RNPK 105
>gi|226506222|ref|NP_001147167.1| LOC100280773 [Zea mays]
gi|195607934|gb|ACG25797.1| small nuclear ribonucleoprotein Sm D2 [Zea mays]
gi|195622778|gb|ACG33219.1| small nuclear ribonucleoprotein Sm D2 [Zea mays]
gi|238013460|gb|ACR37765.1| unknown [Zea mays]
gi|413942324|gb|AFW74973.1| Small nuclear ribonucleoprotein Sm D2 isoform 1 [Zea mays]
gi|413942325|gb|AFW74974.1| Small nuclear ribonucleoprotein Sm D2 isoform 2 [Zea mays]
gi|413942326|gb|AFW74975.1| Small nuclear ribonucleoprotein Sm D2 isoform 3 [Zea mays]
Length = 104
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/64 (96%), Positives = 64/64 (100%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRVRAFDRHCNMVLENVREMWTE+PKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL
Sbjct: 41 KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 100
Query: 91 RNPK 94
RNPK
Sbjct: 101 RNPK 104
>gi|413918936|gb|AFW58868.1| hypothetical protein ZEAMMB73_850141 [Zea mays]
Length = 104
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/64 (96%), Positives = 64/64 (100%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRVRAFDRHCNMVLENVREMWTE+PKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL
Sbjct: 41 KLLGRVRAFDRHCNMVLENVREMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 100
Query: 91 RNPK 94
RNPK
Sbjct: 101 RNPK 104
>gi|212720721|ref|NP_001132149.1| uncharacterized protein LOC100193568 [Zea mays]
gi|194693576|gb|ACF80872.1| unknown [Zea mays]
gi|414586342|tpg|DAA36913.1| TPA: hypothetical protein ZEAMMB73_879106 [Zea mays]
gi|414586343|tpg|DAA36914.1| TPA: hypothetical protein ZEAMMB73_879106 [Zea mays]
Length = 105
Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/64 (96%), Positives = 64/64 (100%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRVRAFDRHCNMVLENVREMWTE+PKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL
Sbjct: 42 KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 101
Query: 91 RNPK 94
RNPK
Sbjct: 102 RNPK 105
>gi|414586344|tpg|DAA36915.1| TPA: hypothetical protein ZEAMMB73_879106 [Zea mays]
Length = 102
Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/64 (96%), Positives = 64/64 (100%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRVRAFDRHCNMVLENVREMWTE+PKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL
Sbjct: 39 KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 98
Query: 91 RNPK 94
RNPK
Sbjct: 99 RNPK 102
>gi|326493364|dbj|BAJ85143.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 107
Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/64 (96%), Positives = 64/64 (100%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRVRAFDRHCNMVLENVREMWTE+PKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL
Sbjct: 44 KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 103
Query: 91 RNPK 94
RNPK
Sbjct: 104 RNPK 107
>gi|192910682|gb|ACF06449.1| small nuclear ribonucleoprotein-like protein [Elaeis guineensis]
Length = 105
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/64 (96%), Positives = 64/64 (100%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRVRAFDRHCNMVLENVREMWTE+PKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL
Sbjct: 42 KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 101
Query: 91 RNPK 94
RNPK
Sbjct: 102 RNPK 105
>gi|255573198|ref|XP_002527528.1| small nuclear ribonucleoprotein sm d2, putative [Ricinus communis]
gi|223533078|gb|EEF34837.1| small nuclear ribonucleoprotein sm d2, putative [Ricinus communis]
Length = 103
Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 61/64 (95%), Positives = 64/64 (100%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRVRAFDRHCNMVLENVREMWTE+PKTGKGKKKA+PVNKDRFISKMFLRGDSVIIVL
Sbjct: 40 KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAMPVNKDRFISKMFLRGDSVIIVL 99
Query: 91 RNPK 94
RNPK
Sbjct: 100 RNPK 103
>gi|297821194|ref|XP_002878480.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297324318|gb|EFH54739.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 109
Score = 131 bits (329), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 61/64 (95%), Positives = 64/64 (100%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRVRAFDRHCNMVLENVREMWTE+PKTGKGKKKALPVN+DRFISKMFLRGDSVIIVL
Sbjct: 46 KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVL 105
Query: 91 RNPK 94
RNPK
Sbjct: 106 RNPK 109
>gi|242086617|ref|XP_002439141.1| hypothetical protein SORBIDRAFT_09g001270 [Sorghum bicolor]
gi|190688742|gb|ACE86405.1| putative small nuclear ribonucleoprotein D2 [Sorghum bicolor]
gi|241944426|gb|EES17571.1| hypothetical protein SORBIDRAFT_09g001270 [Sorghum bicolor]
Length = 104
Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 61/63 (96%), Positives = 63/63 (100%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRVRAFDRHCNMVLENVREMWTE+PKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL
Sbjct: 41 KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 100
Query: 91 RNP 93
RNP
Sbjct: 101 RNP 103
>gi|18407411|ref|NP_566107.1| small nuclear ribonucleoprotein D2 [Arabidopsis thaliana]
gi|145331435|ref|NP_001078076.1| small nuclear ribonucleoprotein D2 [Arabidopsis thaliana]
gi|145339793|ref|NP_567134.3| small nuclear ribonucleoprotein D2 [Arabidopsis thaliana]
gi|20196966|gb|AAM14847.1| putative small nuclear ribonucleoprotein D2 [Arabidopsis thaliana]
gi|20197310|gb|AAC63620.2| putative small nuclear ribonucleoprotein D2 [Arabidopsis thaliana]
gi|330255773|gb|AEC10867.1| small nuclear ribonucleoprotein D2 [Arabidopsis thaliana]
gi|330255776|gb|AEC10870.1| small nuclear ribonucleoprotein D2 [Arabidopsis thaliana]
gi|332646879|gb|AEE80400.1| small nuclear ribonucleoprotein D2 [Arabidopsis thaliana]
Length = 109
Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 61/64 (95%), Positives = 64/64 (100%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRVRAFDRHCNMVLENVREMWTE+PKTGKGKKKALPVN+DRFISKMFLRGDSVIIVL
Sbjct: 46 KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVL 105
Query: 91 RNPK 94
RNPK
Sbjct: 106 RNPK 109
>gi|30690747|ref|NP_850477.1| small nuclear ribonucleoprotein D2 [Arabidopsis thaliana]
gi|42571273|ref|NP_973710.1| small nuclear ribonucleoprotein D2 [Arabidopsis thaliana]
gi|145332931|ref|NP_001078331.1| small nuclear ribonucleoprotein D2 [Arabidopsis thaliana]
gi|7362764|emb|CAB83134.1| small nuclear ribonucleoprotein-like protein [Arabidopsis thaliana]
gi|28466881|gb|AAO44049.1| At2g47640 [Arabidopsis thaliana]
gi|110743879|dbj|BAE99774.1| putative small nuclear ribonucleoprotein D2 [Arabidopsis thaliana]
gi|330255774|gb|AEC10868.1| small nuclear ribonucleoprotein D2 [Arabidopsis thaliana]
gi|330255775|gb|AEC10869.1| small nuclear ribonucleoprotein D2 [Arabidopsis thaliana]
gi|332646880|gb|AEE80401.1| small nuclear ribonucleoprotein D2 [Arabidopsis thaliana]
Length = 108
Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 61/64 (95%), Positives = 64/64 (100%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRVRAFDRHCNMVLENVREMWTE+PKTGKGKKKALPVN+DRFISKMFLRGDSVIIVL
Sbjct: 45 KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVL 104
Query: 91 RNPK 94
RNPK
Sbjct: 105 RNPK 108
>gi|297743892|emb|CBI36862.3| unnamed protein product [Vitis vinifera]
Length = 170
Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 61/64 (95%), Positives = 63/64 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRVRAFDRHCNMVLENVREMWTE+PKTGKGKKKA PVNKDRFISKMFLRGDSVIIVL
Sbjct: 107 KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKANPVNKDRFISKMFLRGDSVIIVL 166
Query: 91 RNPK 94
RNPK
Sbjct: 167 RNPK 170
>gi|297824871|ref|XP_002880318.1| hypothetical protein ARALYDRAFT_483945 [Arabidopsis lyrata subsp.
lyrata]
gi|21554692|gb|AAM63661.1| small nuclear ribonucleoprotein-like protein [Arabidopsis thaliana]
gi|21592784|gb|AAM64733.1| small nuclear ribonucleoprotein-like protein [Arabidopsis thaliana]
gi|297326157|gb|EFH56577.1| hypothetical protein ARALYDRAFT_483945 [Arabidopsis lyrata subsp.
lyrata]
Length = 105
Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 61/64 (95%), Positives = 64/64 (100%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRVRAFDRHCNMVLENVREMWTE+PKTGKGKKKALPVN+DRFISKMFLRGDSVIIVL
Sbjct: 42 KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVL 101
Query: 91 RNPK 94
RNPK
Sbjct: 102 RNPK 105
>gi|242076520|ref|XP_002448196.1| hypothetical protein SORBIDRAFT_06g022770 [Sorghum bicolor]
gi|241939379|gb|EES12524.1| hypothetical protein SORBIDRAFT_06g022770 [Sorghum bicolor]
Length = 105
Score = 130 bits (328), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 61/63 (96%), Positives = 63/63 (100%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRVRAFDRHCNMVLENVREMWTE+PKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL
Sbjct: 42 KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 101
Query: 91 RNP 93
RNP
Sbjct: 102 RNP 104
>gi|218189807|gb|EEC72234.1| hypothetical protein OsI_05349 [Oryza sativa Indica Group]
Length = 96
Score = 130 bits (328), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 62/64 (96%), Positives = 64/64 (100%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRVRAFDRHCNMVLENVREMWTE+PKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL
Sbjct: 33 KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 92
Query: 91 RNPK 94
RNPK
Sbjct: 93 RNPK 96
>gi|224068340|ref|XP_002302713.1| predicted protein [Populus trichocarpa]
gi|224128478|ref|XP_002320342.1| predicted protein [Populus trichocarpa]
gi|118481477|gb|ABK92681.1| unknown [Populus trichocarpa]
gi|222844439|gb|EEE81986.1| predicted protein [Populus trichocarpa]
gi|222861115|gb|EEE98657.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/64 (95%), Positives = 63/64 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRVRAFDRHCNMVLENVREMWTE+PKTGKGKKKA PVNKDRFISKMFLRGDSVIIVL
Sbjct: 45 KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVL 104
Query: 91 RNPK 94
RNPK
Sbjct: 105 RNPK 108
>gi|449457536|ref|XP_004146504.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like
[Cucumis sativus]
gi|449499984|ref|XP_004160970.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like
[Cucumis sativus]
Length = 107
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/64 (95%), Positives = 63/64 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRVRAFDRHCNMVLENVREMWTE+PKTGKGKKKA PVNKDRFISKMFLRGDSVIIVL
Sbjct: 44 KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVL 103
Query: 91 RNPK 94
RNPK
Sbjct: 104 RNPK 107
>gi|359806642|ref|NP_001241022.1| uncharacterized protein LOC100793233 [Glycine max]
gi|255633912|gb|ACU17317.1| unknown [Glycine max]
Length = 108
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/64 (95%), Positives = 63/64 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRVRAFDRHCNMVLENVREMWTE+PKTGKGKKKA PVNKDRFISKMFLRGDSVIIVL
Sbjct: 45 KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVL 104
Query: 91 RNPK 94
RNPK
Sbjct: 105 RNPK 108
>gi|357126948|ref|XP_003565149.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like
isoform 1 [Brachypodium distachyon]
gi|357126950|ref|XP_003565150.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like
isoform 2 [Brachypodium distachyon]
Length = 105
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/64 (95%), Positives = 63/64 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRVRAFDRHCNMVLENVREMWTE+PKTGKGKKKA PVNKDRFISKMFLRGDSVIIVL
Sbjct: 42 KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAHPVNKDRFISKMFLRGDSVIIVL 101
Query: 91 RNPK 94
RNPK
Sbjct: 102 RNPK 105
>gi|357521399|ref|XP_003630988.1| Small nuclear ribonucleoprotein-like protein [Medicago truncatula]
gi|355525010|gb|AET05464.1| Small nuclear ribonucleoprotein-like protein [Medicago truncatula]
Length = 104
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/64 (95%), Positives = 63/64 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRVRAFDRHCNMVLENVREMWTE+PKTGKGKKKA PVNKDRFISKMFLRGDSVIIVL
Sbjct: 41 KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVL 100
Query: 91 RNPK 94
RNPK
Sbjct: 101 RNPK 104
>gi|356513032|ref|XP_003525218.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like
[Glycine max]
Length = 108
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/64 (95%), Positives = 63/64 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRVRAFDRHCNMVLENVREMWTE+PKTGKGKKKA PVNKDRFISKMFLRGDSVIIVL
Sbjct: 45 KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVL 104
Query: 91 RNPK 94
RNPK
Sbjct: 105 RNPK 108
>gi|357521397|ref|XP_003630987.1| Small nuclear ribonucleoprotein-like protein [Medicago truncatula]
gi|355525009|gb|AET05463.1| Small nuclear ribonucleoprotein-like protein [Medicago truncatula]
gi|388506390|gb|AFK41261.1| unknown [Medicago truncatula]
Length = 108
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/64 (95%), Positives = 63/64 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRVRAFDRHCNMVLENVREMWTE+PKTGKGKKKA PVNKDRFISKMFLRGDSVIIVL
Sbjct: 45 KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVL 104
Query: 91 RNPK 94
RNPK
Sbjct: 105 RNPK 108
>gi|225437378|ref|XP_002268945.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like
[Vitis vinifera]
Length = 104
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/64 (95%), Positives = 63/64 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRVRAFDRHCNMVLENVREMWTE+PKTGKGKKKA PVNKDRFISKMFLRGDSVIIVL
Sbjct: 41 KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKANPVNKDRFISKMFLRGDSVIIVL 100
Query: 91 RNPK 94
RNPK
Sbjct: 101 RNPK 104
>gi|297737605|emb|CBI26806.3| unnamed protein product [Vitis vinifera]
Length = 103
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/64 (95%), Positives = 63/64 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRVRAFDRHCNMVLENVREMWTE+PKTGKGKKKA PVNKDRFISKMFLRGDSVIIVL
Sbjct: 40 KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKANPVNKDRFISKMFLRGDSVIIVL 99
Query: 91 RNPK 94
RNPK
Sbjct: 100 RNPK 103
>gi|225424416|ref|XP_002285043.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like
[Vitis vinifera]
Length = 107
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/64 (95%), Positives = 63/64 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRVRAFDRHCNMVLENVREMWTE+PKTGKGKKKA PVNKDRFISKMFLRGDSVIIVL
Sbjct: 44 KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKANPVNKDRFISKMFLRGDSVIIVL 103
Query: 91 RNPK 94
RNPK
Sbjct: 104 RNPK 107
>gi|222619939|gb|EEE56071.1| hypothetical protein OsJ_04893 [Oryza sativa Japonica Group]
Length = 104
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/64 (93%), Positives = 63/64 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRVRAFD HCNMVLENVREMWTE+PKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL
Sbjct: 41 KLLGRVRAFDSHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 100
Query: 91 RNPK 94
+NPK
Sbjct: 101 KNPK 104
>gi|116780023|gb|ABK21523.1| unknown [Picea sitchensis]
Length = 108
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/64 (93%), Positives = 63/64 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRVRAFDRHCNMVLENV+EMWTE+PKTGKGKKKA PVNKDRFISKMFLRGDSVIIVL
Sbjct: 45 KLLGRVRAFDRHCNMVLENVKEMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVL 104
Query: 91 RNPK 94
RNPK
Sbjct: 105 RNPK 108
>gi|351727138|ref|NP_001238430.1| uncharacterized protein LOC100500203 [Glycine max]
gi|255629692|gb|ACU15195.1| unknown [Glycine max]
Length = 117
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/64 (93%), Positives = 63/64 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRVRAFDRHCNMVLENVREMWTE+PKTGKGKKK+ PVNKDRFISKMFLRGDSVIIVL
Sbjct: 45 KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKSQPVNKDRFISKMFLRGDSVIIVL 104
Query: 91 RNPK 94
RNPK
Sbjct: 105 RNPK 108
>gi|388501344|gb|AFK38738.1| unknown [Medicago truncatula]
Length = 97
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/64 (93%), Positives = 62/64 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV AFDRHCNMVLENVREMWTE+PKTGKGKKKA PVNKDRFISKMFLRGDSVIIVL
Sbjct: 34 KLLGRVMAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVL 93
Query: 91 RNPK 94
RNPK
Sbjct: 94 RNPK 97
>gi|357495277|ref|XP_003617927.1| Small nuclear ribonucleoprotein-like protein [Medicago
truncatula]
gi|355519262|gb|AET00886.1| Small nuclear ribonucleoprotein-like protein [Medicago
truncatula]
Length = 81
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/64 (93%), Positives = 62/64 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV AFDRHCNMVLENVREMWTE+PKTGKGKKKA PVNKDRFISKMFLRGDSVIIVL
Sbjct: 18 KLLGRVMAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVL 77
Query: 91 RNPK 94
RNPK
Sbjct: 78 RNPK 81
>gi|380027112|ref|XP_003697276.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like
[Apis florea]
Length = 133
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/63 (90%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTELP+TGKGKKKA PVNKDRFISKMFLRGDSVI+VL
Sbjct: 64 KLLGRVKAFDRHCNMVLENVKEMWTELPRTGKGKKKAKPVNKDRFISKMFLRGDSVILVL 123
Query: 91 RNP 93
RNP
Sbjct: 124 RNP 126
>gi|357495275|ref|XP_003617926.1| Small nuclear ribonucleoprotein-like protein [Medicago truncatula]
gi|355519261|gb|AET00885.1| Small nuclear ribonucleoprotein-like protein [Medicago truncatula]
Length = 159
Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/64 (93%), Positives = 62/64 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV AFDRHCNMVLENVREMWTE+PKTGKGKKKA PVNKDRFISKMFLRGDSVIIVL
Sbjct: 96 KLLGRVMAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVL 155
Query: 91 RNPK 94
RNPK
Sbjct: 156 RNPK 159
>gi|66500455|ref|XP_397475.2| PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like
isoform 1 [Apis mellifera]
gi|340709815|ref|XP_003393496.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like
[Bombus terrestris]
gi|350410361|ref|XP_003489020.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like
[Bombus impatiens]
gi|383861912|ref|XP_003706428.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like
[Megachile rotundata]
Length = 120
Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/63 (90%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTELP+TGKGKKKA PVNKDRFISKMFLRGDSVI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTELPRTGKGKKKAKPVNKDRFISKMFLRGDSVILVL 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|328792204|ref|XP_003251694.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like
[Apis mellifera]
Length = 122
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/63 (90%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTELP+TGKGKKKA PVNKDRFISKMFLRGDSVI+VL
Sbjct: 53 KLLGRVKAFDRHCNMVLENVKEMWTELPRTGKGKKKAKPVNKDRFISKMFLRGDSVILVL 112
Query: 91 RNP 93
RNP
Sbjct: 113 RNP 115
>gi|217075318|gb|ACJ86019.1| unknown [Medicago truncatula]
Length = 108
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/64 (92%), Positives = 61/64 (95%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV AFDRHCNMVLENVREMW E+PKTGKGKKKA PVNKDRFISKMFLRGDSVIIVL
Sbjct: 45 KLLGRVGAFDRHCNMVLENVREMWAEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVL 104
Query: 91 RNPK 94
RNPK
Sbjct: 105 RNPK 108
>gi|156544546|ref|XP_001607849.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like
[Nasonia vitripennis]
Length = 120
Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 56/63 (88%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTELP+TGKGKKKA PVNKDRFISKMFLRGDSVI+V+
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTELPRTGKGKKKAKPVNKDRFISKMFLRGDSVILVV 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|307177333|gb|EFN66506.1| Probable small nuclear ribonucleoprotein Sm D2 [Camponotus
floridanus]
Length = 137
Score = 124 bits (310), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 56/63 (88%), Positives = 61/63 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTELP+TGKGKKKA PVNKDRFI KMFLRGDSVI+VL
Sbjct: 68 KLLGRVKAFDRHCNMVLENVKEMWTELPRTGKGKKKAKPVNKDRFIPKMFLRGDSVILVL 127
Query: 91 RNP 93
RNP
Sbjct: 128 RNP 130
>gi|321460184|gb|EFX71229.1| hypothetical protein DAPPUDRAFT_309154 [Daphnia pulex]
Length = 122
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/63 (87%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+P+TGKGKKK+ PVNKDRFISKMFLRGDSVI+VL
Sbjct: 52 KLLGRVKAFDRHCNMVLENVKEMWTEVPRTGKGKKKSKPVNKDRFISKMFLRGDSVILVL 111
Query: 91 RNP 93
RNP
Sbjct: 112 RNP 114
>gi|307194529|gb|EFN76821.1| Probable small nuclear ribonucleoprotein Sm D2 [Harpegnathos
saltator]
gi|322786953|gb|EFZ13177.1| hypothetical protein SINV_00701 [Solenopsis invicta]
Length = 110
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/63 (88%), Positives = 61/63 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTELP+TGKGKKKA PVNKDRFI KMFLRGDSVI+VL
Sbjct: 41 KLLGRVKAFDRHCNMVLENVKEMWTELPRTGKGKKKAKPVNKDRFIPKMFLRGDSVILVL 100
Query: 91 RNP 93
RNP
Sbjct: 101 RNP 103
>gi|115629150|ref|XP_001178435.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like
[Strongylocentrotus purpuratus]
gi|115918091|ref|XP_001177365.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like
[Strongylocentrotus purpuratus]
Length = 118
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/63 (82%), Positives = 60/63 (95%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE PK GKGKK++ PVNKDR+I+KMFLRGDSVI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTETPKAGKGKKRSKPVNKDRYITKMFLRGDSVILVL 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|384247738|gb|EIE21224.1| small nuclear ribonucleo protein Sm D2 [Coccomyxa subellipsoidea
C-169]
Length = 110
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/64 (81%), Positives = 61/64 (95%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNM+LENV+EMWTE+PKTGKGKK + PVNKDRFI K+F+RGDSVI+VL
Sbjct: 47 KLLGRVKAFDRHCNMILENVKEMWTEIPKTGKGKKGSTPVNKDRFIPKLFIRGDSVILVL 106
Query: 91 RNPK 94
RNPK
Sbjct: 107 RNPK 110
>gi|255564180|ref|XP_002523087.1| small nuclear ribonucleoprotein sm d2, putative [Ricinus communis]
gi|223537649|gb|EEF39272.1| small nuclear ribonucleoprotein sm d2, putative [Ricinus communis]
Length = 169
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/73 (80%), Positives = 62/73 (84%), Gaps = 9/73 (12%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTEL---------PKTGKGKKKALPVNKDRFISKMFL 81
+LLGRVR FDRHCNMVLENVREMWTE+ PKTGKGKKKA PVNKDRFISKMFL
Sbjct: 97 KLLGRVRTFDRHCNMVLENVREMWTEVYNYTLFIWVPKTGKGKKKAQPVNKDRFISKMFL 156
Query: 82 RGDSVIIVLRNPK 94
RGDSVIIVLRNP+
Sbjct: 157 RGDSVIIVLRNPE 169
>gi|159480556|ref|XP_001698348.1| small nuclear ribonucleoprotein Sm D2 [Chlamydomonas reinhardtii]
gi|158282088|gb|EDP07841.1| small nuclear ribonucleoprotein Sm D2 [Chlamydomonas reinhardtii]
Length = 110
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 52/64 (81%), Positives = 61/64 (95%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNM+LENV+EMWTE+PKTGKG+K + PVNKDRF+SKMFLRGDSVI+VL
Sbjct: 47 KLLARVKAFDRHCNMILENVKEMWTEIPKTGKGQKASRPVNKDRFVSKMFLRGDSVIMVL 106
Query: 91 RNPK 94
RNPK
Sbjct: 107 RNPK 110
>gi|145343983|ref|XP_001416522.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576747|gb|ABO94815.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 103
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/64 (84%), Positives = 60/64 (93%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+E+WTE+PKTGKG KA PVNKDRFISKMFLRGDSVI+VL
Sbjct: 40 KLLARVKAFDRHCNMVLENVKEIWTEVPKTGKGAAKAKPVNKDRFISKMFLRGDSVILVL 99
Query: 91 RNPK 94
RNPK
Sbjct: 100 RNPK 103
>gi|308801164|ref|XP_003075361.1| small nuclear ribonucleoprotein D2-like protein (ISS) [Ostreococcus
tauri]
gi|116061917|emb|CAL52635.1| small nuclear ribonucleoprotein D2-like protein (ISS), partial
[Ostreococcus tauri]
Length = 103
Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 53/64 (82%), Positives = 60/64 (93%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+E+WTE+PKTGKG KA PVNKDRF+SKMFLRGDSVI+VL
Sbjct: 40 KLLARVKAFDRHCNMVLENVKEIWTEVPKTGKGSAKAKPVNKDRFVSKMFLRGDSVILVL 99
Query: 91 RNPK 94
RNPK
Sbjct: 100 RNPK 103
>gi|302839956|ref|XP_002951534.1| hypothetical protein VOLCADRAFT_81522 [Volvox carteri f.
nagariensis]
gi|300263143|gb|EFJ47345.1| hypothetical protein VOLCADRAFT_81522 [Volvox carteri f.
nagariensis]
Length = 110
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 52/64 (81%), Positives = 60/64 (93%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNM+LENV+EMWTE+PKTGKG K + PVNKDRF+SKMFLRGDSVI+VL
Sbjct: 47 KLLARVKAFDRHCNMILENVKEMWTEIPKTGKGSKGSRPVNKDRFVSKMFLRGDSVIMVL 106
Query: 91 RNPK 94
RNPK
Sbjct: 107 RNPK 110
>gi|328768266|gb|EGF78313.1| hypothetical protein BATDEDRAFT_90808 [Batrachochytrium
dendrobatidis JAM81]
Length = 115
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 58/62 (93%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE P+TGKG KKA PVNKDRFISKMFLRGDSVI+VL
Sbjct: 52 KLLARVKAFDRHCNMVLENVKEMWTETPQTGKGIKKAKPVNKDRFISKMFLRGDSVILVL 111
Query: 91 RN 92
RN
Sbjct: 112 RN 113
>gi|307108556|gb|EFN56796.1| hypothetical protein CHLNCDRAFT_22041 [Chlorella variabilis]
Length = 115
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/64 (82%), Positives = 59/64 (92%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+E WTE+PK GKG K + PVNKDRFISKMFLRGDSVI+VL
Sbjct: 52 KLLGRVKAFDRHCNMVLENVKEFWTEIPKRGKGAKASKPVNKDRFISKMFLRGDSVILVL 111
Query: 91 RNPK 94
RNPK
Sbjct: 112 RNPK 115
>gi|428173912|gb|EKX42811.1| hypothetical protein GUITHDRAFT_153446 [Guillardia theta
CCMP2712]
Length = 99
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/63 (82%), Positives = 59/63 (93%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE P+TGKGK K+ PVNKDRFISKMFLRGDSVI+VL
Sbjct: 36 KLLARVKAFDRHCNMVLENVKEMWTEAPRTGKGKAKSKPVNKDRFISKMFLRGDSVIMVL 95
Query: 91 RNP 93
+NP
Sbjct: 96 KNP 98
>gi|255070809|ref|XP_002507486.1| small nuclear ribonucleoprotein sm D2 [Micromonas sp. RCC299]
gi|226522761|gb|ACO68744.1| small nuclear ribonucleoprotein sm D2 [Micromonas sp. RCC299]
Length = 101
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/64 (79%), Positives = 61/64 (95%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+E+WTE+PKTGKG KKA ++KDRF+SKMF+RGDSVI+VL
Sbjct: 38 KLLGRVKAFDRHCNMVLENVKELWTEIPKTGKGCKKARTISKDRFLSKMFIRGDSVILVL 97
Query: 91 RNPK 94
RNPK
Sbjct: 98 RNPK 101
>gi|297598393|ref|NP_001045506.2| Os01g0967000 [Oryza sativa Japonica Group]
gi|255674111|dbj|BAF07420.2| Os01g0967000 [Oryza sativa Japonica Group]
Length = 226
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 56/63 (88%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRVRAFD HCNMVLENVREMWTE+PKTGKGKKKALPVNKDRFISKMFLRGDS
Sbjct: 164 KLLGRVRAFDSHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSGNQGK 223
Query: 91 RNP 93
NP
Sbjct: 224 ENP 226
>gi|427786227|gb|JAA58565.1| Putative small nuclear ribonucleoprotein d2 polypeptide
[Rhipicephalus pulchellus]
Length = 118
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 52/63 (82%), Positives = 59/63 (93%), Gaps = 1/63 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PKTGK KK PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEIPKTGKSKKNN-PVNKDRYISKMFLRGDSVILVL 109
Query: 91 RNP 93
+NP
Sbjct: 110 KNP 112
>gi|241690286|ref|XP_002411748.1| small nuclear ribonucleoprotein sm D2, putative [Ixodes scapularis]
gi|215504583|gb|EEC14077.1| small nuclear ribonucleoprotein sm D2, putative [Ixodes scapularis]
gi|442752791|gb|JAA68555.1| Putative small nuclear ribonucleoprotein d2 polypeptide [Ixodes
ricinus]
Length = 118
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 52/63 (82%), Positives = 59/63 (93%), Gaps = 1/63 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PKTGK KK PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEIPKTGKSKKNN-PVNKDRYISKMFLRGDSVILVL 109
Query: 91 RNP 93
+NP
Sbjct: 110 KNP 112
>gi|221114937|ref|XP_002158231.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like
[Hydra magnipapillata]
Length = 118
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/63 (80%), Positives = 60/63 (95%), Gaps = 1/63 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMW E+PKTGKG KKA P+NKDR+I+KMFLRGDSVI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWYEIPKTGKG-KKAKPINKDRYIAKMFLRGDSVILVL 109
Query: 91 RNP 93
+NP
Sbjct: 110 KNP 112
>gi|346468901|gb|AEO34295.1| hypothetical protein [Amblyomma maculatum]
gi|346468903|gb|AEO34296.1| hypothetical protein [Amblyomma maculatum]
gi|346468905|gb|AEO34297.1| hypothetical protein [Amblyomma maculatum]
Length = 118
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/63 (80%), Positives = 59/63 (93%), Gaps = 1/63 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+P+TGK KK PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEIPRTGKSKKNN-PVNKDRYISKMFLRGDSVILVL 109
Query: 91 RNP 93
+NP
Sbjct: 110 KNP 112
>gi|134948671|ref|NP_001077096.1| small nuclear ribonucleoprotein sm d2 [Bombyx mori]
gi|117606770|gb|ABK42005.1| small nuclear ribonucleoprotein sm d2 [Bombyx mori]
Length = 119
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/63 (82%), Positives = 59/63 (93%), Gaps = 1/63 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+P+TGKG KK VNKD+FISKMFLRGDSVI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEVPRTGKG-KKGKAVNKDKFISKMFLRGDSVILVL 109
Query: 91 RNP 93
RNP
Sbjct: 110 RNP 112
>gi|357627860|gb|EHJ77403.1| small nuclear ribonucleoprotein sm d2 [Danaus plexippus]
Length = 109
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/63 (82%), Positives = 59/63 (93%), Gaps = 1/63 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+P+TGKG KK VNKD+FISKMFLRGDSVI+VL
Sbjct: 41 KLLGRVKAFDRHCNMVLENVKEMWTEVPRTGKG-KKGKAVNKDKFISKMFLRGDSVILVL 99
Query: 91 RNP 93
RNP
Sbjct: 100 RNP 102
>gi|302766595|ref|XP_002966718.1| hypothetical protein SELMODRAFT_439675 [Selaginella moellendorffii]
gi|300166138|gb|EFJ32745.1| hypothetical protein SELMODRAFT_439675 [Selaginella moellendorffii]
Length = 1249
Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 59/64 (92%), Positives = 63/64 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENVREMWTE+PKTGKGKKKA PVNKDRFISKMFLRGDSVIIVL
Sbjct: 1065 KLLGRVKAFDRHCNMVLENVREMWTEVPKTGKGKKKAKPVNKDRFISKMFLRGDSVIIVL 1124
Query: 91 RNPK 94
+NPK
Sbjct: 1125 KNPK 1128
>gi|391344476|ref|XP_003746524.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like
[Metaseiulus occidentalis]
Length = 116
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/63 (82%), Positives = 57/63 (90%), Gaps = 1/63 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE P+T KG +K PVNKDRFI KMFLRGDSVIIVL
Sbjct: 50 KLLGRVKAFDRHCNMVLENVKEMWTETPRTAKG-RKGQPVNKDRFIPKMFLRGDSVIIVL 108
Query: 91 RNP 93
RNP
Sbjct: 109 RNP 111
>gi|298710498|emb|CBJ25562.1| small nuclear ribonucleoprotein D2-like protein [Ectocarpus
siliculosus]
Length = 82
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 58/63 (92%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL R++AFDRHCNMVL +V+EMWTE PKTGKG+KKA VNKDR++SKMFLRGDSV++VL
Sbjct: 19 KLLARIKAFDRHCNMVLTDVKEMWTEQPKTGKGQKKAKAVNKDRYVSKMFLRGDSVVLVL 78
Query: 91 RNP 93
RNP
Sbjct: 79 RNP 81
>gi|196006700|ref|XP_002113216.1| hypothetical protein TRIADDRAFT_57149 [Trichoplax adhaerens]
gi|190583620|gb|EDV23690.1| hypothetical protein TRIADDRAFT_57149 [Trichoplax adhaerens]
Length = 173
Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 50/63 (79%), Positives = 59/63 (93%), Gaps = 1/63 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
++L RV+AFDRHCNMVLENV+EMWTE P+TGKG +KA PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 103 KILARVKAFDRHCNMVLENVKEMWTETPRTGKG-RKAKPVNKDRYISKMFLRGDSVILVL 161
Query: 91 RNP 93
+NP
Sbjct: 162 KNP 164
>gi|384500116|gb|EIE90607.1| small nuclear ribonucleoprotein Sm D2 [Rhizopus delemar RA 99-880]
Length = 113
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/62 (79%), Positives = 57/62 (91%), Gaps = 1/62 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE P+TGKG KA PVNKDRF+SKMFLRGD+V++VL
Sbjct: 51 KLLARVKAFDRHCNMVLENVKEMWTETPRTGKG-SKAKPVNKDRFVSKMFLRGDTVVLVL 109
Query: 91 RN 92
RN
Sbjct: 110 RN 111
>gi|313226859|emb|CBY22004.1| unnamed protein product [Oikopleura dioica]
gi|313242576|emb|CBY34708.1| unnamed protein product [Oikopleura dioica]
Length = 118
Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 50/63 (79%), Positives = 56/63 (88%), Gaps = 1/63 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+L+GRV+AFDRHCNMVLENV+EMW E PKT KG K PVN+DRFISKMFLRGDSVIIVL
Sbjct: 52 KLMGRVKAFDRHCNMVLENVKEMWVERPKTAKG-KGGQPVNRDRFISKMFLRGDSVIIVL 110
Query: 91 RNP 93
+NP
Sbjct: 111 KNP 113
>gi|313214959|emb|CBY41164.1| unnamed protein product [Oikopleura dioica]
Length = 118
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/63 (79%), Positives = 56/63 (88%), Gaps = 1/63 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+L+GRV+AFDRHCNMVLENV+EMW E PKT KG K PVN+DRFISKMFLRGDSVIIVL
Sbjct: 52 KLMGRVKAFDRHCNMVLENVKEMWVERPKTSKG-KGGQPVNRDRFISKMFLRGDSVIIVL 110
Query: 91 RNP 93
+NP
Sbjct: 111 KNP 113
>gi|303274376|ref|XP_003056509.1| small nuclear ribonucleoprotein sm D2 [Micromonas pusilla CCMP1545]
gi|226462593|gb|EEH59885.1| small nuclear ribonucleoprotein sm D2 [Micromonas pusilla CCMP1545]
Length = 103
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/64 (73%), Positives = 58/64 (90%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLG+++AFDRHCNMVLENV+E W E+ KTGKG K+ P++K+RFISKMFLRGDSVI+VL
Sbjct: 40 KLLGQIKAFDRHCNMVLENVKEYWLEVSKTGKGVKRTTPIHKERFISKMFLRGDSVILVL 99
Query: 91 RNPK 94
RNPK
Sbjct: 100 RNPK 103
>gi|168044533|ref|XP_001774735.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673890|gb|EDQ60406.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 103
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/64 (92%), Positives = 63/64 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PKTGKGKKKA PVNKDRFISKMFLRGDSVIIVL
Sbjct: 40 KLLGRVKAFDRHCNMVLENVKEMWTEVPKTGKGKKKAKPVNKDRFISKMFLRGDSVIIVL 99
Query: 91 RNPK 94
RNPK
Sbjct: 100 RNPK 103
>gi|339252990|ref|XP_003371718.1| small nuclear ribonucleoprotein Sm D2 [Trichinella spiralis]
gi|316967993|gb|EFV52337.1| small nuclear ribonucleoprotein Sm D2 [Trichinella spiralis]
Length = 118
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 58/64 (90%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+L+ RV+AFDRHCNM+LENV+EMWTE+P+ GKG+K+ VNKDRFISKMFLRGD VI+V+
Sbjct: 46 KLIARVKAFDRHCNMILENVKEMWTEIPRVGKGQKRGNAVNKDRFISKMFLRGDIVILVM 105
Query: 91 RNPK 94
+NP+
Sbjct: 106 KNPQ 109
>gi|134108164|ref|XP_777280.1| hypothetical protein CNBB2650 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259967|gb|EAL22633.1| hypothetical protein CNBB2650 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 165
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/62 (83%), Positives = 56/62 (90%), Gaps = 4/62 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE PK GKGKK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 106 KLLARVKAFDRHCNMVLENVKEMWTETPK-GKGKK---PVNKDRFISKMFLRGDSVILVL 161
Query: 91 RN 92
RN
Sbjct: 162 RN 163
>gi|328768108|gb|EGF78155.1| hypothetical protein BATDEDRAFT_91018 [Batrachochytrium
dendrobatidis JAM81]
Length = 109
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/57 (84%), Positives = 52/57 (91%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVI 87
+LL RV+AFDRHCNMVLENV+EMWTE P+TGKG KKA PVNKDRFISKMFLRGDS I
Sbjct: 52 KLLARVKAFDRHCNMVLENVKEMWTETPQTGKGIKKAKPVNKDRFISKMFLRGDSGI 108
>gi|58263220|ref|XP_569020.1| pre-mRNA splicing factor [Cryptococcus neoformans var. neoformans
JEC21]
gi|321249059|ref|XP_003191330.1| pre-mRNA splicing factor [Cryptococcus gattii WM276]
gi|57223670|gb|AAW41713.1| pre-mRNA splicing factor, putative [Cryptococcus neoformans var.
neoformans JEC21]
gi|317457797|gb|ADV19543.1| Pre-mRNA splicing factor, putative [Cryptococcus gattii WM276]
gi|405118541|gb|AFR93315.1| pre-mRNA splicing factor [Cryptococcus neoformans var. grubii H99]
Length = 111
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/62 (83%), Positives = 56/62 (90%), Gaps = 4/62 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE PK GKGKK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 52 KLLARVKAFDRHCNMVLENVKEMWTETPK-GKGKK---PVNKDRFISKMFLRGDSVILVL 107
Query: 91 RN 92
RN
Sbjct: 108 RN 109
>gi|443703701|gb|ELU01136.1| hypothetical protein CAPTEDRAFT_149444 [Capitella teleta]
Length = 118
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/63 (88%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PKTGKGKKK+ PVNKDRFISKMFLRGDSVI+VL
Sbjct: 52 KLLGRVKAFDRHCNMVLENVKEMWTEVPKTGKGKKKSKPVNKDRFISKMFLRGDSVILVL 111
Query: 91 RNP 93
RNP
Sbjct: 112 RNP 114
>gi|168057690|ref|XP_001780846.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667702|gb|EDQ54325.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 99
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/64 (90%), Positives = 63/64 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PKTGKGKKKA PVNKDRFISKMFLRG+SVIIVL
Sbjct: 36 KLLGRVKAFDRHCNMVLENVKEMWTEVPKTGKGKKKAKPVNKDRFISKMFLRGESVIIVL 95
Query: 91 RNPK 94
RNPK
Sbjct: 96 RNPK 99
>gi|294882885|ref|XP_002769869.1| Small nuclear ribonucleoprotein Sm D2, putative [Perkinsus marinus
ATCC 50983]
gi|239873682|gb|EER02587.1| Small nuclear ribonucleoprotein Sm D2, putative [Perkinsus marinus
ATCC 50983]
Length = 110
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/64 (78%), Positives = 57/64 (89%), Gaps = 3/64 (4%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
++LGRV+AFDRH NMVLENVRE+WTE+PK G KK PVNKDRF+SKMFLRGDSVI+VL
Sbjct: 47 KILGRVKAFDRHFNMVLENVRELWTEVPKGGSNKK---PVNKDRFVSKMFLRGDSVIMVL 103
Query: 91 RNPK 94
RNPK
Sbjct: 104 RNPK 107
>gi|403332734|gb|EJY65407.1| Small nuclear riboprotein Sm D2 [Oxytricha trifallax]
Length = 103
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/64 (79%), Positives = 57/64 (89%), Gaps = 1/64 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRH NMVLENV EMWTE PK KG KKA PVN++R+ISKMFLRGDSVIIV+
Sbjct: 41 KLLGRVKAFDRHMNMVLENVCEMWTETPKPHKG-KKAHPVNRERYISKMFLRGDSVIIVI 99
Query: 91 RNPK 94
RNPK
Sbjct: 100 RNPK 103
>gi|328765680|gb|EGF75829.1| hypothetical protein BATDEDRAFT_15195 [Batrachochytrium
dendrobatidis JAM81]
Length = 74
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 48/57 (84%), Positives = 52/57 (91%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVI 87
+LL RV+AFDRHCNMVLENV+EMWTE P+TGKG KKA PVNKDRFISKMFLRGDS I
Sbjct: 17 KLLARVKAFDRHCNMVLENVKEMWTETPQTGKGIKKAKPVNKDRFISKMFLRGDSGI 73
>gi|112253319|gb|ABI14247.1| Sm-like protein [Pfiesteria piscicida]
gi|112253321|gb|ABI14248.1| small nuclear ribonucleoprotein D2-like protein [Pfiesteria
piscicida]
Length = 101
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 50/64 (78%), Positives = 57/64 (89%), Gaps = 2/64 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
++L RV+AFDRH NMVLENVREMWTE+P GK KKA PVNKDRFI+K+FLRGDSVI+VL
Sbjct: 40 KILARVKAFDRHSNMVLENVREMWTEVPHGGK--KKAKPVNKDRFITKLFLRGDSVILVL 97
Query: 91 RNPK 94
RNPK
Sbjct: 98 RNPK 101
>gi|291224549|ref|XP_002732266.1| PREDICTED: Small Nuclear Ribonucleoprotein family member
(snr-4)-like [Saccoglossus kowalevskii]
Length = 123
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/63 (87%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PKTGKGKKK+ PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 56 KLLGRVKAFDRHCNMVLENVKEMWTEVPKTGKGKKKSKPVNKDRYISKMFLRGDSVILVL 115
Query: 91 RNP 93
RNP
Sbjct: 116 RNP 118
>gi|402217994|gb|EJT98072.1| Sm-like ribonucleo protein [Dacryopinax sp. DJM-731 SS1]
Length = 111
Score = 103 bits (258), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/62 (82%), Positives = 56/62 (90%), Gaps = 4/62 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRH NMVLENV+EMWTE+PK GKGKK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 52 KLLARVKAFDRHTNMVLENVKEMWTEVPK-GKGKK---PVNKDRFISKMFLRGDSVILVL 107
Query: 91 RN 92
RN
Sbjct: 108 RN 109
>gi|430813655|emb|CCJ29007.1| unnamed protein product [Pneumocystis jirovecii]
Length = 114
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/62 (79%), Positives = 54/62 (87%), Gaps = 1/62 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRH NMVLENV+EMWTE P+ KG KK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 52 KLLARVKAFDRHSNMVLENVKEMWTETPRNSKG-KKGKPVNKDRFISKMFLRGDSVILVL 110
Query: 91 RN 92
RN
Sbjct: 111 RN 112
>gi|71021395|ref|XP_760928.1| hypothetical protein UM04781.1 [Ustilago maydis 521]
gi|46101003|gb|EAK86236.1| hypothetical protein UM04781.1 [Ustilago maydis 521]
gi|343426204|emb|CBQ69735.1| probable small nuclear ribonucleoprotein chain D2 [Sporisorium
reilianum SRZ2]
gi|443900125|dbj|GAC77452.1| 17 beta-hydroxysteroid dehydrogenase type 3 [Pseudozyma antarctica
T-34]
Length = 111
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/62 (80%), Positives = 56/62 (90%), Gaps = 4/62 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRH NMVLENV+EMWTE+PK GKGKK PVNKDRFISKMFLRGDSV++VL
Sbjct: 52 KLLARVKAFDRHSNMVLENVKEMWTEVPK-GKGKK---PVNKDRFISKMFLRGDSVVLVL 107
Query: 91 RN 92
RN
Sbjct: 108 RN 109
>gi|348676937|gb|EGZ16754.1| hypothetical protein PHYSODRAFT_559644 [Phytophthora sojae]
Length = 123
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 60/63 (95%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE+PK+GKGKK A PVNKDRF+SKMFLRGDSVIIVL
Sbjct: 59 KLLARVKAFDRHCNMVLENVKEMWTEVPKSGKGKKAAKPVNKDRFVSKMFLRGDSVIIVL 118
Query: 91 RNP 93
RNP
Sbjct: 119 RNP 121
>gi|388857230|emb|CCF49243.1| probable small nuclear ribonucleoprotein chain D2 [Ustilago hordei]
Length = 111
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/62 (80%), Positives = 56/62 (90%), Gaps = 4/62 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRH NMVLENV+EMWTE+PK GKGKK PVNKDRFISKMFLRGDSV++VL
Sbjct: 52 KLLARVKAFDRHSNMVLENVKEMWTEVPK-GKGKK---PVNKDRFISKMFLRGDSVVLVL 107
Query: 91 RN 92
RN
Sbjct: 108 RN 109
>gi|126697412|gb|ABO26663.1| small nuclear ribonucleoprotein D2-like protein [Haliotis discus
discus]
Length = 119
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 61/63 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE+PKTGKGKKK+ PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 52 KLLARVKAFDRHCNMVLENVKEMWTEVPKTGKGKKKSKPVNKDRYISKMFLRGDSVILVL 111
Query: 91 RNP 93
RNP
Sbjct: 112 RNP 114
>gi|406866515|gb|EKD19555.1| LSM domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 106
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/60 (81%), Positives = 53/60 (88%), Gaps = 1/60 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE PKT G KK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 46 KLLARVKAFDRHCNMVLENVKEMWTEAPKTS-GGKKGRPVNKDRFISKMFLRGDSVILVL 104
>gi|242024699|ref|XP_002432764.1| small nuclear ribonucleoprotein sm D2, putative [Pediculus humanus
corporis]
gi|212518249|gb|EEB20026.1| small nuclear ribonucleoprotein sm D2, putative [Pediculus humanus
corporis]
Length = 110
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/63 (87%), Positives = 61/63 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTELP++GKGKKKA VNKDRFISKMFLRGDSVI+VL
Sbjct: 41 KLLGRVKAFDRHCNMVLENVKEMWTELPRSGKGKKKAKSVNKDRFISKMFLRGDSVILVL 100
Query: 91 RNP 93
RNP
Sbjct: 101 RNP 103
>gi|395334237|gb|EJF66613.1| Sm-like ribonucleo protein [Dichomitus squalens LYAD-421 SS1]
Length = 111
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/62 (82%), Positives = 55/62 (88%), Gaps = 4/62 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRH NMVLENV+EMWTELPK GK KK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 52 KLLARVKAFDRHSNMVLENVKEMWTELPK-GKNKK---PVNKDRFISKMFLRGDSVILVL 107
Query: 91 RN 92
RN
Sbjct: 108 RN 109
>gi|405978739|gb|EKC43103.1| Putative small nuclear ribonucleoprotein Sm D2 [Crassostrea gigas]
Length = 119
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 61/63 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE+PKTGKGKKK+ PVNKDR+ISKMFLRGDSVI++L
Sbjct: 52 KLLARVKAFDRHCNMVLENVKEMWTEVPKTGKGKKKSKPVNKDRYISKMFLRGDSVILIL 111
Query: 91 RNP 93
RNP
Sbjct: 112 RNP 114
>gi|260835152|ref|XP_002612573.1| hypothetical protein BRAFLDRAFT_265042 [Branchiostoma floridae]
gi|229297951|gb|EEN68582.1| hypothetical protein BRAFLDRAFT_265042 [Branchiostoma floridae]
Length = 116
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 61/63 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE+PKTGKGKKK+ P+NKDR+ISKMFLRGDSVI+VL
Sbjct: 48 KLLARVKAFDRHCNMVLENVKEMWTEVPKTGKGKKKSKPINKDRYISKMFLRGDSVILVL 107
Query: 91 RNP 93
RNP
Sbjct: 108 RNP 110
>gi|22203734|gb|AAM94277.1| small nuclear ribonucleoprotein D2-like protein [Azumapecten
farreri]
Length = 119
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 61/63 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE+PKTGKGKKK+ PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 52 KLLARVKAFDRHCNMVLENVKEMWTEVPKTGKGKKKSKPVNKDRYISKMFLRGDSVILVL 111
Query: 91 RNP 93
RNP
Sbjct: 112 RNP 114
>gi|328867188|gb|EGG15571.1| LSM domain-containing protein [Dictyostelium fasciculatum]
Length = 110
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/63 (88%), Positives = 61/63 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RVRAFDRHCNMVLENV+EMWTE+PKTGKGKKKA PVNKDRFISKMFLRGDSVI+VL
Sbjct: 45 KLLARVRAFDRHCNMVLENVKEMWTEVPKTGKGKKKAKPVNKDRFISKMFLRGDSVILVL 104
Query: 91 RNP 93
+NP
Sbjct: 105 KNP 107
>gi|225712108|gb|ACO11900.1| Probable small nuclear ribonucleoprotein Sm D2 [Lepeophtheirus
salmonis]
Length = 115
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/63 (87%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLE+V+EMWTE+PKTGKGKKKA PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 50 KLLGRVKAFDRHCNMVLESVKEMWTEMPKTGKGKKKAKPVNKDRYISKMFLRGDSVILVL 109
Query: 91 RNP 93
RNP
Sbjct: 110 RNP 112
>gi|66809065|ref|XP_638255.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
gi|74853875|sp|Q54NC5.1|SMD2_DICDI RecName: Full=Probable small nuclear ribonucleoprotein Sm D2;
Short=Sm-D2; AltName: Full=snRNP core protein D2
gi|60466721|gb|EAL64772.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
Length = 112
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 61/63 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRVRAFDRHCNMVLENV+E+WTE+PKT KGKKKA P+NKDRFISKMFLRGDSVI+VL
Sbjct: 42 KLLGRVRAFDRHCNMVLENVKEIWTEVPKTAKGKKKAKPINKDRFISKMFLRGDSVILVL 101
Query: 91 RNP 93
+NP
Sbjct: 102 KNP 104
>gi|330793131|ref|XP_003284639.1| hypothetical protein DICPUDRAFT_86347 [Dictyostelium purpureum]
gi|325085438|gb|EGC38845.1| hypothetical protein DICPUDRAFT_86347 [Dictyostelium purpureum]
Length = 116
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 61/63 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRVRAFDRHCNMVLENV+E+WTE+PKT KGKKKA P+NKDRFISKMFLRGDSVI+VL
Sbjct: 46 KLLGRVRAFDRHCNMVLENVKEIWTEVPKTAKGKKKAKPINKDRFISKMFLRGDSVILVL 105
Query: 91 RNP 93
+NP
Sbjct: 106 KNP 108
>gi|409083385|gb|EKM83742.1| hypothetical protein AGABI1DRAFT_124072 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 111
Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/62 (80%), Positives = 55/62 (88%), Gaps = 4/62 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRH NMVLENV+EMWTE+PK GK KK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 52 KLLARVKAFDRHSNMVLENVKEMWTEIPK-GKNKK---PVNKDRFISKMFLRGDSVILVL 107
Query: 91 RN 92
RN
Sbjct: 108 RN 109
>gi|156361110|ref|XP_001625363.1| predicted protein [Nematostella vectensis]
gi|156212193|gb|EDO33263.1| predicted protein [Nematostella vectensis]
Length = 119
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 60/63 (95%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE PK+GKGKKKA PVNKDR+I+KMFLRGDSVI+VL
Sbjct: 52 KLLARVKAFDRHCNMVLENVKEMWTETPKSGKGKKKAKPVNKDRYIAKMFLRGDSVILVL 111
Query: 91 RNP 93
RNP
Sbjct: 112 RNP 114
>gi|389739270|gb|EIM80464.1| Sm-like ribonucleo protein [Stereum hirsutum FP-91666 SS1]
Length = 111
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/62 (79%), Positives = 55/62 (88%), Gaps = 4/62 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRH NMVLENV+EMWTE+PK GK KK PVNKDRFISKMFLRGDSVI++L
Sbjct: 52 KLLARVKAFDRHSNMVLENVKEMWTEIPK-GKNKK---PVNKDRFISKMFLRGDSVILIL 107
Query: 91 RN 92
RN
Sbjct: 108 RN 109
>gi|145535864|ref|XP_001453665.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421387|emb|CAK86268.1| unnamed protein product [Paramecium tetraurelia]
Length = 103
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/64 (75%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRH NM+LENV EMWTE+PK KG KKA NK+RFI KMFLRGDSVI +L
Sbjct: 41 KLLGRVKAFDRHMNMILENVTEMWTEIPKGNKG-KKAHATNKERFIPKMFLRGDSVIYIL 99
Query: 91 RNPK 94
RNPK
Sbjct: 100 RNPK 103
>gi|388583928|gb|EIM24229.1| Sm-like ribonucleo protein [Wallemia sebi CBS 633.66]
Length = 111
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/62 (79%), Positives = 55/62 (88%), Gaps = 4/62 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRH NMVLENV+EMWTE PK GKGK+ P+NKDRFISKMFLRGDSVI+VL
Sbjct: 52 KLLARVKAFDRHSNMVLENVKEMWTETPK-GKGKQ---PINKDRFISKMFLRGDSVILVL 107
Query: 91 RN 92
RN
Sbjct: 108 RN 109
>gi|198434899|ref|XP_002127683.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 119
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 59/63 (93%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE PK+GKGKKK PVN+DRFISKMFLRGDSVIIVL
Sbjct: 51 KLLARVKAFDRHCNMVLENVKEMWTETPKSGKGKKKQQPVNRDRFISKMFLRGDSVIIVL 110
Query: 91 RNP 93
+NP
Sbjct: 111 KNP 113
>gi|242221237|ref|XP_002476371.1| predicted protein [Postia placenta Mad-698-R]
gi|220724376|gb|EED78423.1| predicted protein [Postia placenta Mad-698-R]
Length = 111
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/62 (79%), Positives = 55/62 (88%), Gaps = 4/62 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRH NMVLENV+EMWTE+PK GK KK PVNKDRFISKMFLRGDSVI++L
Sbjct: 52 KLLARVKAFDRHSNMVLENVKEMWTEMPK-GKNKK---PVNKDRFISKMFLRGDSVILIL 107
Query: 91 RN 92
RN
Sbjct: 108 RN 109
>gi|340517487|gb|EGR47731.1| predicted protein [Trichoderma reesei QM6a]
gi|358388581|gb|EHK26174.1| hypothetical protein TRIVIDRAFT_35950 [Trichoderma virens Gv29-8]
Length = 117
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 52/60 (86%), Gaps = 1/60 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE P+ G KK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 57 KLLARVKAFDRHCNMVLENVKEMWTETPRLADG-KKGRPVNKDRFISKMFLRGDSVILVL 115
>gi|353237783|emb|CCA69748.1| probable small nuclear ribonucleoprotein chain D2 [Piriformospora
indica DSM 11827]
Length = 122
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/62 (79%), Positives = 54/62 (87%), Gaps = 4/62 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRH NMVLENV+EMWTE P +GK KK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 63 KLLARVKAFDRHSNMVLENVKEMWTETP-SGKNKK---PVNKDRFISKMFLRGDSVILVL 118
Query: 91 RN 92
RN
Sbjct: 119 RN 120
>gi|170084079|ref|XP_001873263.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650815|gb|EDR15055.1| predicted protein [Laccaria bicolor S238N-H82]
gi|336377064|gb|EGO05399.1| hypothetical protein SERLA73DRAFT_174539 [Serpula lacrymans var.
lacrymans S7.3]
gi|336390107|gb|EGO31250.1| hypothetical protein SERLADRAFT_456135 [Serpula lacrymans var.
lacrymans S7.9]
Length = 111
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/62 (79%), Positives = 55/62 (88%), Gaps = 4/62 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRH NMVLENV+EMWTE+PK GK KK PVNKDRFISKMFLRGDSVI++L
Sbjct: 52 KLLARVKAFDRHSNMVLENVKEMWTEVPK-GKNKK---PVNKDRFISKMFLRGDSVILIL 107
Query: 91 RN 92
RN
Sbjct: 108 RN 109
>gi|380476129|emb|CCF44882.1| small nuclear ribonucleoprotein Sm D2 [Colletotrichum higginsianum]
Length = 118
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 52/60 (86%), Gaps = 1/60 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE P+ G KK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 58 KLLARVKAFDRHCNMVLENVKEMWTETPRLANG-KKGRPVNKDRFISKMFLRGDSVILVL 116
>gi|320170085|gb|EFW46984.1| small nuclear ribonucleoprotein sm d2 [Capsaspora owczarzaki ATCC
30864]
Length = 118
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 54/63 (85%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRH NM+LE+VRE WTE + GKGK K+ PVNKDRFISK+FLRGDSVII+L
Sbjct: 50 KLLARVKAFDRHFNMILEDVREFWTEGTRAGKGKTKSKPVNKDRFISKLFLRGDSVIIIL 109
Query: 91 RNP 93
NP
Sbjct: 110 PNP 112
>gi|310794394|gb|EFQ29855.1| LSM domain-containing protein [Glomerella graminicola M1.001]
Length = 118
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 52/60 (86%), Gaps = 1/60 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE P+ G KK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 58 KLLARVKAFDRHCNMVLENVKEMWTETPRLANG-KKGRPVNKDRFISKMFLRGDSVILVL 116
>gi|358392303|gb|EHK41707.1| hypothetical protein TRIATDRAFT_30322 [Trichoderma atroviride IMI
206040]
Length = 117
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 52/60 (86%), Gaps = 1/60 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE P+ G KK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 57 KLLARVKAFDRHCNMVLENVKEMWTETPRLADG-KKGRPVNKDRFISKMFLRGDSVILVL 115
>gi|332376785|gb|AEE63532.1| unknown [Dendroctonus ponderosae]
Length = 117
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 61/63 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTELP+ GKGKKKA PVNKDRFISKMFLRGD+VI+++
Sbjct: 50 KLLGRVKAFDRHCNMVLENVKEMWTELPRPGKGKKKAKPVNKDRFISKMFLRGDAVIMIV 109
Query: 91 RNP 93
RNP
Sbjct: 110 RNP 112
>gi|91090234|ref|XP_968776.1| PREDICTED: similar to CG1249 CG1249-PA [Tribolium castaneum]
gi|270013456|gb|EFA09904.1| hypothetical protein TcasGA2_TC012054 [Tribolium castaneum]
Length = 118
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 61/63 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCN+VLENV+EMWTELP+ GKGKKKA PVNKDRFISKMFLRGD+VIIV+
Sbjct: 50 KLLGRVKAFDRHCNIVLENVKEMWTELPRPGKGKKKAKPVNKDRFISKMFLRGDAVIIVV 109
Query: 91 RNP 93
RNP
Sbjct: 110 RNP 112
>gi|342880846|gb|EGU81864.1| hypothetical protein FOXB_07659 [Fusarium oxysporum Fo5176]
Length = 118
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 52/60 (86%), Gaps = 1/60 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE P+ G KK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 58 KLLARVKAFDRHCNMVLENVKEMWTETPRLANG-KKGRPVNKDRFISKMFLRGDSVILVL 116
>gi|453086972|gb|EMF15013.1| Sm-like ribonucleo protein [Mycosphaerella populorum SO2202]
Length = 121
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 54/60 (90%), Gaps = 1/60 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMW+E P+T GKK + VNKDRFISKMFLRGDSVI+VL
Sbjct: 61 KLLGRVKAFDRHCNMVLENVKEMWSETPRTSDGKKGRV-VNKDRFISKMFLRGDSVILVL 119
>gi|402078814|gb|EJT74079.1| small nuclear ribonucleoprotein Sm D2 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 117
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 52/60 (86%), Gaps = 1/60 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE P+ G KK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 57 KLLARVKAFDRHCNMVLENVKEMWTETPRLANG-KKGRPVNKDRFISKMFLRGDSVILVL 115
>gi|389644410|ref|XP_003719837.1| small nuclear ribonucleoprotein Sm D2 [Magnaporthe oryzae 70-15]
gi|351639606|gb|EHA47470.1| small nuclear ribonucleoprotein Sm D2 [Magnaporthe oryzae 70-15]
gi|440470057|gb|ELQ39146.1| small nuclear ribonucleoprotein Sm D2 [Magnaporthe oryzae Y34]
gi|440490054|gb|ELQ69649.1| small nuclear ribonucleoprotein Sm D2 [Magnaporthe oryzae P131]
Length = 117
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 52/60 (86%), Gaps = 1/60 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE P+ G KK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 57 KLLARVKAFDRHCNMVLENVKEMWTETPRLASG-KKGRPVNKDRFISKMFLRGDSVILVL 115
>gi|393247820|gb|EJD55327.1| Sm-like ribonucleo protein [Auricularia delicata TFB-10046 SS5]
Length = 111
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/62 (79%), Positives = 55/62 (88%), Gaps = 4/62 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRH NMVLENV+EMWTE+PK GK KK PVNKDRFISKMFLRGDSV++VL
Sbjct: 52 KLLARVKAFDRHTNMVLENVKEMWTEVPK-GKNKK---PVNKDRFISKMFLRGDSVVLVL 107
Query: 91 RN 92
RN
Sbjct: 108 RN 109
>gi|392597247|gb|EIW86569.1| Sm-like ribonucleo protein [Coniophora puteana RWD-64-598 SS2]
Length = 111
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/62 (79%), Positives = 55/62 (88%), Gaps = 4/62 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRH NMVLENV+EMWTE+PK GK KK PVNKDRFISKMFLRGDSVI++L
Sbjct: 52 KLLARVKAFDRHSNMVLENVKEMWTEVPK-GKNKK---PVNKDRFISKMFLRGDSVILIL 107
Query: 91 RN 92
RN
Sbjct: 108 RN 109
>gi|429861913|gb|ELA36576.1| small nuclear ribonucleoprotein sm d2 [Colletotrichum
gloeosporioides Nara gc5]
Length = 118
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 52/60 (86%), Gaps = 1/60 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE P+ G KK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 58 KLLARVKAFDRHCNMVLENVKEMWTETPRLANG-KKGRPVNKDRFISKMFLRGDSVILVL 116
>gi|302909473|ref|XP_003050081.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731018|gb|EEU44368.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 117
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 52/60 (86%), Gaps = 1/60 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE P+ G KK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 57 KLLARVKAFDRHCNMVLENVKEMWTETPRLANG-KKGRPVNKDRFISKMFLRGDSVILVL 115
>gi|325183558|emb|CCA18019.1| hypothetical protein SORBIDRAFT_06g022770 [Albugo laibachii Nc14]
Length = 110
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/63 (79%), Positives = 59/63 (93%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE+PK+GKGKK PVNKDRF+SK+FLRGDSV++VL
Sbjct: 46 KLLARVKAFDRHCNMVLENVKEMWTEVPKSGKGKKSGKPVNKDRFVSKLFLRGDSVVLVL 105
Query: 91 RNP 93
RNP
Sbjct: 106 RNP 108
>gi|400600870|gb|EJP68538.1| LSM domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 118
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 52/60 (86%), Gaps = 1/60 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE P+ G KK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 58 KLLARVKAFDRHCNMVLENVKEMWTETPRLADG-KKGRPVNKDRFISKMFLRGDSVILVL 116
>gi|46125281|ref|XP_387194.1| hypothetical protein FG07018.1 [Gibberella zeae PH-1]
Length = 155
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 52/60 (86%), Gaps = 1/60 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE P+ G KK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 95 KLLARVKAFDRHCNMVLENVKEMWTETPRLA-GGKKGRPVNKDRFISKMFLRGDSVILVL 153
>gi|112143936|gb|ABI13177.1| putative small nuclear ribonucleoprotein d2 [Emiliania huxleyi]
Length = 110
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/64 (89%), Positives = 61/64 (95%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK GKG KKA PVNKDRFISKMFLRGDSVIIVL
Sbjct: 47 KLLGRVKAFDRHCNMVLENVKEMWTEVPKKGKGVKKAKPVNKDRFISKMFLRGDSVIIVL 106
Query: 91 RNPK 94
RNPK
Sbjct: 107 RNPK 110
>gi|408397992|gb|EKJ77129.1| hypothetical protein FPSE_02773 [Fusarium pseudograminearum CS3096]
Length = 117
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 52/60 (86%), Gaps = 1/60 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE P+ G KK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 57 KLLARVKAFDRHCNMVLENVKEMWTETPRLA-GGKKGRPVNKDRFISKMFLRGDSVILVL 115
>gi|452985934|gb|EME85690.1| hypothetical protein MYCFIDRAFT_82569 [Pseudocercospora fijiensis
CIRAD86]
Length = 122
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 53/60 (88%), Gaps = 1/60 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE+P+ G KK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 62 KLLCRVKAFDRHCNMVLENVKEMWTEIPRLADG-KKGRPVNKDRFISKMFLRGDSVILVL 120
>gi|167516090|ref|XP_001742386.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779010|gb|EDQ92624.1| predicted protein [Monosiga brevicollis MX1]
Length = 123
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 5/81 (6%)
Query: 13 SQTTLMLFCFWALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNK 72
S T +++FC +LL RV+AFDRHCNMVLE V+EMWTE PK GKG+KK P+NK
Sbjct: 43 SNTQVLIFCRNNK-----KLLARVKAFDRHCNMVLEQVKEMWTETPKAGKGQKKKKPINK 97
Query: 73 DRFISKMFLRGDSVIIVLRNP 93
DRFISKMFLRGD+VI+VLRNP
Sbjct: 98 DRFISKMFLRGDTVILVLRNP 118
>gi|440635668|gb|ELR05587.1| small nuclear ribonucleoprotein D2 [Geomyces destructans 20631-21]
Length = 118
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 52/60 (86%), Gaps = 1/60 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE P+ G KK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 58 KLLARVKAFDRHCNMVLENVKEMWTETPRLA-GGKKGRPVNKDRFISKMFLRGDSVILVL 116
>gi|224010008|ref|XP_002293962.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970634|gb|EED88971.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 108
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 55/63 (87%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+A+DRH N++LE+V+EMWTE K GKG+K+ +NKDR++SKMFLRGDSVI+V+
Sbjct: 37 KLLGRVKAYDRHMNLLLEDVKEMWTEYSKGGKGRKRGTSINKDRYVSKMFLRGDSVILVV 96
Query: 91 RNP 93
NP
Sbjct: 97 SNP 99
>gi|63501063|ref|XP_619909.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Mus
musculus]
Length = 118
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/63 (80%), Positives = 60/63 (95%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+ KGKKK+ PVNKD +ISK+FLRGDSVI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSSKGKKKSKPVNKDCYISKIFLRGDSVIVVL 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|225711330|gb|ACO11511.1| Probable small nuclear ribonucleoprotein Sm D2 [Caligus
rogercresseyi]
Length = 115
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/61 (86%), Positives = 60/61 (98%)
Query: 33 LGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRN 92
LGRV+AFDRHCNMVLE+V+EMWTE+PKTGKGKKKA PVNKDR+ISKMFLRGDS+I+VLRN
Sbjct: 52 LGRVKAFDRHCNMVLESVKEMWTEMPKTGKGKKKAKPVNKDRYISKMFLRGDSIILVLRN 111
Query: 93 P 93
P
Sbjct: 112 P 112
>gi|309264759|ref|XP_003086355.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Mus
musculus]
Length = 118
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/63 (80%), Positives = 60/63 (95%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+ KGKKK+ PVNKD +ISK+FLRGDSVI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSSKGKKKSKPVNKDCYISKIFLRGDSVIVVL 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|390604110|gb|EIN13501.1| Sm-like ribonucleo protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 111
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/62 (79%), Positives = 55/62 (88%), Gaps = 4/62 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRH NMVLENV+EMWTE+PK GK KK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 52 KLLARVKAFDRHSNMVLENVKEMWTEVPK-GKNKK---PVNKDRFISKMFLRGDSVILVL 107
Query: 91 RN 92
R+
Sbjct: 108 RH 109
>gi|256085048|ref|XP_002578736.1| small nuclear ribonucleoprotein Sm D2 [Schistosoma mansoni]
gi|360045476|emb|CCD83024.1| putative small nuclear ribonucleoprotein Sm D2 [Schistosoma
mansoni]
Length = 124
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/63 (82%), Positives = 60/63 (95%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE+P+ GKGKKK+ PVNKDRFISK+FLRGDSVI+VL
Sbjct: 52 KLLARVKAFDRHCNMVLENVKEMWTEVPRPGKGKKKSKPVNKDRFISKLFLRGDSVILVL 111
Query: 91 RNP 93
RNP
Sbjct: 112 RNP 114
>gi|226470754|emb|CAX76810.1| putative small nuclear ribonucleoprotein Sm D2 [Schistosoma
japonicum]
gi|226470756|emb|CAX76811.1| putative small nuclear ribonucleoprotein Sm D2 [Schistosoma
japonicum]
gi|226470758|emb|CAX76812.1| putative small nuclear ribonucleoprotein Sm D2 [Schistosoma
japonicum]
gi|226470760|emb|CAX76813.1| putative small nuclear ribonucleoprotein Sm D2 [Schistosoma
japonicum]
gi|226470762|emb|CAX76814.1| putative small nuclear ribonucleoprotein Sm D2 [Schistosoma
japonicum]
gi|226470764|emb|CAX76815.1| putative small nuclear ribonucleoprotein Sm D2 [Schistosoma
japonicum]
gi|226470766|emb|CAX76816.1| putative small nuclear ribonucleoprotein Sm D2 [Schistosoma
japonicum]
gi|226470768|emb|CAX76817.1| putative small nuclear ribonucleoprotein Sm D2 [Schistosoma
japonicum]
gi|226473196|emb|CAX71284.1| putative small nuclear ribonucleoprotein Sm D2 [Schistosoma
japonicum]
gi|226473198|emb|CAX71285.1| putative small nuclear ribonucleoprotein Sm D2 [Schistosoma
japonicum]
gi|226473200|emb|CAX71286.1| putative small nuclear ribonucleoprotein Sm D2 [Schistosoma
japonicum]
gi|226473202|emb|CAX71287.1| putative small nuclear ribonucleoprotein Sm D2 [Schistosoma
japonicum]
Length = 124
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/63 (82%), Positives = 60/63 (95%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE+P+ GKGKKK+ PVNKDRFISK+FLRGDSVI+VL
Sbjct: 52 KLLARVKAFDRHCNMVLENVKEMWTEVPRPGKGKKKSKPVNKDRFISKLFLRGDSVILVL 111
Query: 91 RNP 93
RNP
Sbjct: 112 RNP 114
>gi|398391274|ref|XP_003849097.1| small nuclear ribonucleoprotein Sm D2 [Zymoseptoria tritici IPO323]
gi|339468973|gb|EGP84073.1| hypothetical protein MYCGRDRAFT_101457 [Zymoseptoria tritici
IPO323]
Length = 122
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 53/60 (88%), Gaps = 1/60 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
++L RV+AFDRHCNMVLENV+EMWTE+P+ G KK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 62 KMLARVKAFDRHCNMVLENVKEMWTEVPRLTDG-KKGRPVNKDRFISKMFLRGDSVILVL 120
>gi|237832903|ref|XP_002365749.1| small nuclear ribonucleoprotein Sm D2, putative [Toxoplasma gondii
ME49]
gi|401408795|ref|XP_003883846.1| hypothetical protein NCLIV_035950 [Neospora caninum Liverpool]
gi|211963413|gb|EEA98608.1| small nuclear ribonucleoprotein Sm D2, putative [Toxoplasma gondii
ME49]
gi|221488207|gb|EEE26421.1| small nuclear ribonucleoprotein Sm D2, putative [Toxoplasma gondii
GT1]
gi|221508720|gb|EEE34289.1| small nuclear ribonucleoprotein Sm D2, putative [Toxoplasma gondii
VEG]
gi|325118263|emb|CBZ53814.1| hypothetical protein NCLIV_035950 [Neospora caninum Liverpool]
Length = 104
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/64 (73%), Positives = 56/64 (87%), Gaps = 1/64 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
++LGRV+AFDRHCN+VL +VREMWTE K G GKKK VNKDRFISK+FLRGD+VI++L
Sbjct: 42 KVLGRVKAFDRHCNLVLTDVREMWTETSKGG-GKKKVRTVNKDRFISKLFLRGDAVILIL 100
Query: 91 RNPK 94
RNPK
Sbjct: 101 RNPK 104
>gi|195061660|ref|XP_001996040.1| GH14279 [Drosophila grimshawi]
gi|193891832|gb|EDV90698.1| GH14279 [Drosophila grimshawi]
Length = 128
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/63 (88%), Positives = 61/63 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTELP+TGKGKKK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 59 KLLGRVKAFDRHCNMVLENVKEMWTELPRTGKGKKKVKPVNKDRFISKMFLRGDSVILVL 118
Query: 91 RNP 93
RNP
Sbjct: 119 RNP 121
>gi|323456239|gb|EGB12106.1| hypothetical protein AURANDRAFT_20164 [Aureococcus anophagefferens]
Length = 104
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/63 (82%), Positives = 61/63 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+E+WTE+PKTGKGKKK+ PVNK+R+ISKMFLRGDSVI+VL
Sbjct: 39 KLLARVKAFDRHCNMVLENVKEVWTEIPKTGKGKKKSKPVNKERYISKMFLRGDSVILVL 98
Query: 91 RNP 93
RNP
Sbjct: 99 RNP 101
>gi|444732316|gb|ELW72617.1| Small nuclear ribonucleoprotein Sm D2 [Tupaia chinensis]
Length = 199
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/63 (80%), Positives = 59/63 (93%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGR +AFDRHCNM LENV+EMWTE+PK+GKGKKK PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 42 KLLGRGKAFDRHCNMALENVKEMWTEVPKSGKGKKKFKPVNKDRYISKMFLRGDSVIVVL 101
Query: 91 RNP 93
+NP
Sbjct: 102 QNP 104
>gi|393218655|gb|EJD04143.1| Sm-like ribonucleo protein [Fomitiporia mediterranea MF3/22]
Length = 112
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/62 (77%), Positives = 54/62 (87%), Gaps = 4/62 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRH NMVLENV+EMW E+PK GK KK PVNKDRFISKMFLRGDSVI++L
Sbjct: 53 KLLARVKAFDRHTNMVLENVKEMWVEVPK-GKNKK---PVNKDRFISKMFLRGDSVILIL 108
Query: 91 RN 92
RN
Sbjct: 109 RN 110
>gi|392571577|gb|EIW64749.1| Sm-like ribonucleo protein [Trametes versicolor FP-101664 SS1]
Length = 111
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/62 (79%), Positives = 54/62 (87%), Gaps = 4/62 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRH NMVLENV+EMWTE+PK GK KK VNKDRFISKMFLRGDSVI+VL
Sbjct: 52 KLLARVKAFDRHSNMVLENVKEMWTEMPK-GKNKK---AVNKDRFISKMFLRGDSVILVL 107
Query: 91 RN 92
RN
Sbjct: 108 RN 109
>gi|340959200|gb|EGS20381.1| putative small nuclear ribonucleoprotein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 592
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 46/60 (76%), Positives = 51/60 (85%), Gaps = 2/60 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNM+LENV+EMWTE P T KK PVNKDRFISKMFLRGDSV+IVL
Sbjct: 533 KLLARVKAFDRHCNMILENVKEMWTETPVT--NGKKGRPVNKDRFISKMFLRGDSVVIVL 590
>gi|407927523|gb|EKG20414.1| hypothetical protein MPH_02260 [Macrophomina phaseolina MS6]
Length = 118
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 51/60 (85%), Gaps = 1/60 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE PK G K PVNKDRFISKMFLRGDSVI+VL
Sbjct: 58 KLLARVKAFDRHCNMVLENVKEMWTEKPKLANG-KPGRPVNKDRFISKMFLRGDSVILVL 116
>gi|195144664|ref|XP_002013316.1| GL23477 [Drosophila persimilis]
gi|194102259|gb|EDW24302.1| GL23477 [Drosophila persimilis]
Length = 124
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/63 (88%), Positives = 61/63 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTELP+TGKGKKK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 55 KLLGRVKAFDRHCNMVLENVKEMWTELPRTGKGKKKVKPVNKDRFISKMFLRGDSVILVL 114
Query: 91 RNP 93
RNP
Sbjct: 115 RNP 117
>gi|195453024|ref|XP_002073604.1| GK14204 [Drosophila willistoni]
gi|194169689|gb|EDW84590.1| GK14204 [Drosophila willistoni]
Length = 120
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/63 (88%), Positives = 61/63 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTELP+TGKGKKK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTELPRTGKGKKKVKPVNKDRFISKMFLRGDSVILVL 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|21357623|ref|NP_649645.1| small ribonucleoprotein particle protein SmD2 [Drosophila
melanogaster]
gi|195109364|ref|XP_001999257.1| GI23171 [Drosophila mojavensis]
gi|195343951|ref|XP_002038554.1| GM10560 [Drosophila sechellia]
gi|195568713|ref|XP_002102358.1| GD19551 [Drosophila simulans]
gi|390178314|ref|XP_001358903.3| GA11659 [Drosophila pseudoobscura pseudoobscura]
gi|33112452|sp|Q9VI10.1|SMD2_DROME RecName: Full=Probable small nuclear ribonucleoprotein Sm D2;
Short=Sm-D2; AltName: Full=snRNP core protein D2
gi|7298930|gb|AAF54135.1| small ribonucleoprotein particle protein SmD2 [Drosophila
melanogaster]
gi|17861966|gb|AAL39460.1| LD03002p [Drosophila melanogaster]
gi|193915851|gb|EDW14718.1| GI23171 [Drosophila mojavensis]
gi|194133575|gb|EDW55091.1| GM10560 [Drosophila sechellia]
gi|194198285|gb|EDX11861.1| GD19551 [Drosophila simulans]
gi|220952896|gb|ACL88991.1| snRNP2-PA [synthetic construct]
gi|388859402|gb|EAL28046.3| GA11659 [Drosophila pseudoobscura pseudoobscura]
Length = 119
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/63 (88%), Positives = 61/63 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTELP+TGKGKKK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 50 KLLGRVKAFDRHCNMVLENVKEMWTELPRTGKGKKKVKPVNKDRFISKMFLRGDSVILVL 109
Query: 91 RNP 93
RNP
Sbjct: 110 RNP 112
>gi|449302285|gb|EMC98294.1| hypothetical protein BAUCODRAFT_146847 [Baudoinia compniacensis
UAMH 10762]
Length = 119
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 52/60 (86%), Gaps = 1/60 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE P+ G K+ PVNKDRFISKMFLRGDSVI+VL
Sbjct: 59 KLLARVKAFDRHCNMVLENVKEMWTETPRLTDG-KRGRPVNKDRFISKMFLRGDSVILVL 117
>gi|345568451|gb|EGX51345.1| hypothetical protein AOL_s00054g415 [Arthrobotrys oligospora ATCC
24927]
Length = 112
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 52/60 (86%), Gaps = 1/60 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRH NMVLENV+EMWTE P+ +G KK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 52 KLLARVKAFDRHSNMVLENVKEMWTETPRNAQG-KKGRPVNKDRFISKMFLRGDSVILVL 110
>gi|195502267|ref|XP_002098148.1| GE24106 [Drosophila yakuba]
gi|194184249|gb|EDW97860.1| GE24106 [Drosophila yakuba]
Length = 123
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/63 (88%), Positives = 61/63 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTELP+TGKGKKK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 54 KLLGRVKAFDRHCNMVLENVKEMWTELPRTGKGKKKVKPVNKDRFISKMFLRGDSVILVL 113
Query: 91 RNP 93
RNP
Sbjct: 114 RNP 116
>gi|358342021|dbj|GAA49579.1| small nuclear ribonucleoprotein D2 [Clonorchis sinensis]
Length = 124
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/63 (80%), Positives = 60/63 (95%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE+P+ GKGKKK+ PVNKDR+ISK+FLRGDSVI+VL
Sbjct: 53 KLLARVKAFDRHCNMVLENVKEMWTEVPRPGKGKKKSKPVNKDRYISKLFLRGDSVILVL 112
Query: 91 RNP 93
RNP
Sbjct: 113 RNP 115
>gi|194899029|ref|XP_001979065.1| GG10522 [Drosophila erecta]
gi|190650768|gb|EDV48023.1| GG10522 [Drosophila erecta]
Length = 121
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/63 (88%), Positives = 61/63 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTELP+TGKGKKK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 52 KLLGRVKAFDRHCNMVLENVKEMWTELPRTGKGKKKVKPVNKDRFISKMFLRGDSVILVL 111
Query: 91 RNP 93
RNP
Sbjct: 112 RNP 114
>gi|119115655|ref|XP_318388.2| AGAP003936-PA [Anopheles gambiae str. PEST]
gi|116119487|gb|EAA13684.2| AGAP003936-PA [Anopheles gambiae str. PEST]
Length = 119
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/64 (85%), Positives = 62/64 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+P+TGKGKKK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 50 KLLGRVKAFDRHCNMVLENVKEMWTEIPRTGKGKKKVKPVNKDRFISKMFLRGDSVILVL 109
Query: 91 RNPK 94
RNP+
Sbjct: 110 RNPQ 113
>gi|322703763|gb|EFY95367.1| small nuclear ribonucleoprotein Sm D2 [Metarhizium anisopliae ARSEF
23]
Length = 121
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 51/60 (85%), Gaps = 1/60 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMW E P+ G KK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 61 KLLARVKAFDRHCNMVLENVKEMWDETPRLADG-KKGRPVNKDRFISKMFLRGDSVILVL 119
>gi|195399858|ref|XP_002058536.1| GJ14487 [Drosophila virilis]
gi|194142096|gb|EDW58504.1| GJ14487 [Drosophila virilis]
Length = 125
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/63 (88%), Positives = 61/63 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTELP+TGKGKKK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 56 KLLGRVKAFDRHCNMVLENVKEMWTELPRTGKGKKKVKPVNKDRFISKMFLRGDSVILVL 115
Query: 91 RNP 93
RNP
Sbjct: 116 RNP 118
>gi|157124529|ref|XP_001654090.1| small nuclear ribonucleoprotein sm d2 [Aedes aegypti]
gi|108873936|gb|EAT38161.1| AAEL009914-PA [Aedes aegypti]
Length = 119
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/64 (85%), Positives = 62/64 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+P+TGKGKKK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 50 KLLGRVKAFDRHCNMVLENVKEMWTEVPRTGKGKKKVKPVNKDRFISKMFLRGDSVILVL 109
Query: 91 RNPK 94
RNP+
Sbjct: 110 RNPQ 113
>gi|70997219|ref|XP_753362.1| small nuclear ribonucleoprotein SmD2 [Aspergillus fumigatus Af293]
gi|66850998|gb|EAL91324.1| small nuclear ribonucleoprotein SmD2, putative [Aspergillus
fumigatus Af293]
gi|159126913|gb|EDP52029.1| small nuclear ribonucleoprotein SmD2, putative [Aspergillus
fumigatus A1163]
Length = 122
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 52/60 (86%), Gaps = 4/60 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE PK GKG+ VNKDRFISKMFLRGDSVI+VL
Sbjct: 65 KLLARVKAFDRHCNMVLENVKEMWTEKPKGGKGRG----VNKDRFISKMFLRGDSVILVL 120
>gi|119478615|ref|XP_001259398.1| small nuclear ribonucleoprotein SmD2, putative [Neosartorya
fischeri NRRL 181]
gi|121713894|ref|XP_001274558.1| small nuclear ribonucleoprotein SmD2, putative [Aspergillus
clavatus NRRL 1]
gi|119402711|gb|EAW13132.1| small nuclear ribonucleoprotein SmD2, putative [Aspergillus
clavatus NRRL 1]
gi|119407552|gb|EAW17501.1| small nuclear ribonucleoprotein SmD2, putative [Neosartorya
fischeri NRRL 181]
Length = 115
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 52/60 (86%), Gaps = 4/60 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE PK GKG+ VNKDRFISKMFLRGDSVI+VL
Sbjct: 58 KLLARVKAFDRHCNMVLENVKEMWTEKPKGGKGRG----VNKDRFISKMFLRGDSVILVL 113
>gi|452846138|gb|EME48071.1| hypothetical protein DOTSEDRAFT_21783 [Dothistroma septosporum
NZE10]
Length = 121
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 52/60 (86%), Gaps = 1/60 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE+P+ G KK VNKDRFISKMFLRGDSVI+VL
Sbjct: 61 KLLARVKAFDRHCNMVLENVKEMWTEIPRLADG-KKGRAVNKDRFISKMFLRGDSVILVL 119
>gi|242762206|ref|XP_002340329.1| small nuclear ribonucleoprotein SmD2, putative [Talaromyces
stipitatus ATCC 10500]
gi|218723525|gb|EED22942.1| small nuclear ribonucleoprotein SmD2, putative [Talaromyces
stipitatus ATCC 10500]
Length = 114
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 52/60 (86%), Gaps = 4/60 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE PK GKG+ VNKDRFISKMFLRGDSVI+VL
Sbjct: 57 KLLARVKAFDRHCNMVLENVKEMWTEKPKGGKGR----GVNKDRFISKMFLRGDSVILVL 112
>gi|212529806|ref|XP_002145060.1| small nuclear ribonucleoprotein SmD2, putative [Talaromyces
marneffei ATCC 18224]
gi|210074458|gb|EEA28545.1| small nuclear ribonucleoprotein SmD2, putative [Talaromyces
marneffei ATCC 18224]
Length = 114
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 52/60 (86%), Gaps = 4/60 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE PK GKG+ VNKDRFISKMFLRGDSVI+VL
Sbjct: 57 KLLARVKAFDRHCNMVLENVKEMWTEKPKGGKGR----GVNKDRFISKMFLRGDSVILVL 112
>gi|351699571|gb|EHB02490.1| Small nuclear ribonucleoprotein Sm D2 [Heterocephalus glaber]
Length = 91
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/63 (69%), Positives = 54/63 (85%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLG +AFDR CNMVLEN++EMWTE+PK G+GKKK PV KD +ISK+FL GDSVI+VL
Sbjct: 24 KLLGCAKAFDRDCNMVLENMKEMWTEVPKRGQGKKKFKPVRKDHYISKIFLHGDSVIMVL 83
Query: 91 RNP 93
+NP
Sbjct: 84 QNP 86
>gi|226470770|emb|CAX76818.1| putative small nuclear ribonucleoprotein Sm D2 [Schistosoma
japonicum]
Length = 87
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/63 (82%), Positives = 60/63 (95%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE+P+ GKGKKK+ PVNKDRFISK+FLRGDSVI+VL
Sbjct: 15 KLLARVKAFDRHCNMVLENVKEMWTEVPRPGKGKKKSKPVNKDRFISKLFLRGDSVILVL 74
Query: 91 RNP 93
RNP
Sbjct: 75 RNP 77
>gi|358053885|dbj|GAB00018.1| hypothetical protein E5Q_06720 [Mixia osmundae IAM 14324]
Length = 111
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/62 (77%), Positives = 55/62 (88%), Gaps = 4/62 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRH NMVLENV+EMWTE+PK GK KK PVNKDRFISK+FLRGDSVI+VL
Sbjct: 52 KLLARVKAFDRHSNMVLENVKEMWTEIPK-GKNKK---PVNKDRFISKLFLRGDSVIMVL 107
Query: 91 RN 92
R+
Sbjct: 108 RS 109
>gi|168017146|ref|XP_001761109.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687795|gb|EDQ74176.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 99
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/64 (90%), Positives = 62/64 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK GKGKKKA PVNKDRFISKMFLRGDSVIIVL
Sbjct: 36 KLLGRVKAFDRHCNMVLENVKEMWTEVPKAGKGKKKAKPVNKDRFISKMFLRGDSVIIVL 95
Query: 91 RNPK 94
RNPK
Sbjct: 96 RNPK 99
>gi|317034834|ref|XP_001401271.2| small nuclear ribonucleoprotein Sm D2 [Aspergillus niger CBS
513.88]
gi|350639668|gb|EHA28022.1| hypothetical protein ASPNIDRAFT_41962 [Aspergillus niger ATCC 1015]
gi|358374829|dbj|GAA91418.1| small nuclear ribonucleoprotein SmD2 [Aspergillus kawachii IFO
4308]
Length = 115
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 51/60 (85%), Gaps = 4/60 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE PK G GK VNKDRFISKMFLRGDSVI+VL
Sbjct: 58 KLLARVKAFDRHCNMVLENVKEMWTEKPKGGNGKG----VNKDRFISKMFLRGDSVILVL 113
>gi|331242627|ref|XP_003333959.1| small nuclear ribonucleoprotein Sm D2 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|309312949|gb|EFP89540.1| small nuclear ribonucleoprotein Sm D2 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|328861040|gb|EGG10144.1| hypothetical protein MELLADRAFT_94522 [Melampsora larici-populina
98AG31]
Length = 111
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/62 (79%), Positives = 54/62 (87%), Gaps = 4/62 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRH NMVL NV+EMWTELPK GK KK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 52 KLLARVKAFDRHSNMVLVNVKEMWTELPK-GKNKK---PVNKDRFISKMFLRGDSVILVL 107
Query: 91 RN 92
R+
Sbjct: 108 RH 109
>gi|156058484|ref|XP_001595165.1| hypothetical protein SS1G_03254 [Sclerotinia sclerotiorum 1980]
gi|154701041|gb|EDO00780.1| hypothetical protein SS1G_03254 [Sclerotinia sclerotiorum 1980
UF-70]
gi|347839440|emb|CCD54012.1| similar to small nuclear ribonucleoprotein sm d2 [Botryotinia
fuckeliana]
Length = 118
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/61 (77%), Positives = 54/61 (88%), Gaps = 3/61 (4%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPK-TGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+LL RV+AFDRHCNMVLENV+EMWTE P+ +G GK + PVNKDRFISKMFLRGDSVI+V
Sbjct: 58 KLLARVKAFDRHCNMVLENVKEMWTETPRLSGGGKGR--PVNKDRFISKMFLRGDSVILV 115
Query: 90 L 90
L
Sbjct: 116 L 116
>gi|425772328|gb|EKV10736.1| Small nuclear ribonucleoprotein SmD2, putative [Penicillium
digitatum Pd1]
gi|425777592|gb|EKV15755.1| Small nuclear ribonucleoprotein SmD2, putative [Penicillium
digitatum PHI26]
Length = 117
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 51/60 (85%), Gaps = 4/60 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE PK KGK VNKDRFISKMFLRGDSVI+VL
Sbjct: 60 KLLARVKAFDRHCNMVLENVKEMWTEKPKGAKGKG----VNKDRFISKMFLRGDSVILVL 115
>gi|134081955|emb|CAK97221.1| unnamed protein product [Aspergillus niger]
Length = 117
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 51/60 (85%), Gaps = 4/60 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE PK G GK VNKDRFISKMFLRGDSVI+VL
Sbjct: 60 KLLARVKAFDRHCNMVLENVKEMWTEKPKGGNGK----GVNKDRFISKMFLRGDSVILVL 115
>gi|444732321|gb|ELW72622.1| Small nuclear ribonucleoprotein Sm D2 [Tupaia chinensis]
Length = 170
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/63 (79%), Positives = 58/63 (92%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGR +AFDRHCNM LENV+EMWTE+PK+GKGKKK PVNKDR+ISK FLRGDSVI+VL
Sbjct: 42 KLLGRGKAFDRHCNMALENVKEMWTEVPKSGKGKKKFKPVNKDRYISKKFLRGDSVIVVL 101
Query: 91 RNP 93
+NP
Sbjct: 102 QNP 104
>gi|255954305|ref|XP_002567905.1| Pc21g08660 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589616|emb|CAP95763.1| Pc21g08660 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 123
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 51/60 (85%), Gaps = 4/60 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE PK KGK VNKDRFISKMFLRGDSVI++L
Sbjct: 66 KLLARVKAFDRHCNMVLENVKEMWTEKPKGAKGKG----VNKDRFISKMFLRGDSVILIL 121
>gi|115387341|ref|XP_001211176.1| small nuclear ribonucleoprotein Sm D2 [Aspergillus terreus NIH2624]
gi|114195260|gb|EAU36960.1| small nuclear ribonucleoprotein Sm D2 [Aspergillus terreus NIH2624]
Length = 115
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 51/60 (85%), Gaps = 4/60 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE PK KGK VNKDRFISKMFLRGDSVI+VL
Sbjct: 58 KLLARVKAFDRHCNMVLENVKEMWTEKPKGSKGKG----VNKDRFISKMFLRGDSVILVL 113
>gi|219113577|ref|XP_002186372.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583222|gb|ACI65842.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 122
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 54/63 (85%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+A+DRH N++LE+V+EMWTE+ K GKG+ + VNKDR++SKMFLRGDSVI+V+
Sbjct: 45 KLLARVKAYDRHMNLLLEDVKEMWTEVSKGGKGRTRGTAVNKDRYVSKMFLRGDSVILVV 104
Query: 91 RNP 93
NP
Sbjct: 105 SNP 107
>gi|320590837|gb|EFX03280.1| small nuclear ribonucleoprotein sm d2 [Grosmannia clavigera kw1407]
Length = 116
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 51/60 (85%), Gaps = 2/60 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNM+LENV+EMWTE P T KK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 57 KLLARVKAFDRHCNMILENVKEMWTETPVT--NGKKGRPVNKDRFISKMFLRGDSVILVL 114
>gi|170030740|ref|XP_001843246.1| small nuclear ribonucleoprotein sm d2 [Culex quinquefasciatus]
gi|167867922|gb|EDS31305.1| small nuclear ribonucleoprotein sm d2 [Culex quinquefasciatus]
Length = 119
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/64 (84%), Positives = 61/64 (95%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+P+ GKGKKK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 50 KLLGRVKAFDRHCNMVLENVKEMWTEVPRAGKGKKKVKPVNKDRFISKMFLRGDSVILVL 109
Query: 91 RNPK 94
RNP+
Sbjct: 110 RNPQ 113
>gi|290972303|ref|XP_002668893.1| predicted protein [Naegleria gruberi]
gi|290991668|ref|XP_002678457.1| predicted protein [Naegleria gruberi]
gi|284082430|gb|EFC36149.1| predicted protein [Naegleria gruberi]
gi|284092069|gb|EFC45713.1| predicted protein [Naegleria gruberi]
Length = 118
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/64 (76%), Positives = 59/64 (92%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE PK+GKG+KK+ P+NK RF +K+FLRGDSVI+VL
Sbjct: 54 KLLARVKAFDRHCNMVLENVQEMWTEQPKSGKGRKKSKPINKTRFTNKLFLRGDSVILVL 113
Query: 91 RNPK 94
RNPK
Sbjct: 114 RNPK 117
>gi|380092270|emb|CCC10046.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 119
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 51/60 (85%), Gaps = 1/60 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
++L RV+AFDRH NMVLENV+EMWTE P+ G KK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 59 KILARVKAFDRHMNMVLENVKEMWTETPRLANG-KKGKPVNKDRFISKMFLRGDSVILVL 117
>gi|164426898|ref|XP_961124.2| small nuclear ribonucleoprotein Sm D2 [Neurospora crassa OR74A]
gi|157071520|gb|EAA31888.2| small nuclear ribonucleoprotein Sm D2 [Neurospora crassa OR74A]
Length = 119
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 51/60 (85%), Gaps = 1/60 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
++L RV+AFDRH NMVLENV+EMWTE P+ G KK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 59 KILARVKAFDRHMNMVLENVKEMWTETPRLANG-KKGKPVNKDRFISKMFLRGDSVILVL 117
>gi|336472988|gb|EGO61148.1| small nuclear ribonucleoprotein Sm D2 [Neurospora tetrasperma FGSC
2508]
gi|350293763|gb|EGZ74848.1| small nuclear ribonucleoprotein Sm D2 [Neurospora tetrasperma FGSC
2509]
Length = 119
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 51/60 (85%), Gaps = 1/60 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
++L RV+AFDRH NMVLENV+EMWTE P+ G KK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 59 KILARVKAFDRHMNMVLENVKEMWTETPRLANG-KKGKPVNKDRFISKMFLRGDSVILVL 117
>gi|336274873|ref|XP_003352190.1| hypothetical protein SMAC_02625 [Sordaria macrospora k-hell]
Length = 108
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 51/60 (85%), Gaps = 1/60 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
++L RV+AFDRH NMVLENV+EMWTE P+ G KK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 48 KILARVKAFDRHMNMVLENVKEMWTETPRLANG-KKGKPVNKDRFISKMFLRGDSVILVL 106
>gi|367050014|ref|XP_003655386.1| hypothetical protein THITE_2119053 [Thielavia terrestris NRRL 8126]
gi|347002650|gb|AEO69050.1| hypothetical protein THITE_2119053 [Thielavia terrestris NRRL 8126]
Length = 116
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 50/60 (83%), Gaps = 2/60 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNM+LENV+EMWTE P KK PVNKDRFISKMFLRGDSVIIVL
Sbjct: 57 KLLARVKAFDRHCNMILENVKEMWTETPV--HNGKKGRPVNKDRFISKMFLRGDSVIIVL 114
>gi|452825642|gb|EME32637.1| small nuclear ribonucleoprotein D2 [Galdieria sulphuraria]
Length = 119
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 56/64 (87%), Gaps = 4/64 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLG+V+AFDRH NM+LENV+E+WTE+PK+ KKA PVNKDRFI KMFLRGDSV++VL
Sbjct: 60 KLLGKVKAFDRHFNMILENVKEIWTEIPKS----KKARPVNKDRFIPKMFLRGDSVVLVL 115
Query: 91 RNPK 94
+ P+
Sbjct: 116 KAPQ 119
>gi|367028268|ref|XP_003663418.1| hypothetical protein MYCTH_2305356 [Myceliophthora thermophila ATCC
42464]
gi|347010687|gb|AEO58173.1| hypothetical protein MYCTH_2305356 [Myceliophthora thermophila ATCC
42464]
Length = 116
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 50/60 (83%), Gaps = 2/60 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNM+LENV+EMWTE P KK PVNKDRFISKMFLRGDSVIIVL
Sbjct: 57 KLLARVKAFDRHCNMILENVKEMWTETPV--HNGKKGRPVNKDRFISKMFLRGDSVIIVL 114
>gi|403280870|ref|XP_003931930.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Saimiri
boliviensis boliviensis]
Length = 212
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/62 (79%), Positives = 58/62 (93%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+ KGKKK+ PVNKDR+ISKMFL G SVI+VL
Sbjct: 52 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSSKGKKKSKPVNKDRYISKMFLCGGSVIVVL 111
Query: 91 RN 92
+N
Sbjct: 112 QN 113
>gi|237858781|ref|NP_001153822.1| small nuclear ribonucleoprotein D2-like [Acyrthosiphon pisum]
gi|193606141|ref|XP_001943704.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like
[Acyrthosiphon pisum]
gi|54287930|gb|AAV31412.1| putative small nuclear ribonucleoprotein D2-like protein [Toxoptera
citricida]
gi|239790582|dbj|BAH71844.1| ACYPI003451 [Acyrthosiphon pisum]
gi|239790584|dbj|BAH71845.1| ACYPI003451 [Acyrthosiphon pisum]
gi|239790586|dbj|BAH71846.1| ACYPI003451 [Acyrthosiphon pisum]
gi|239790588|dbj|BAH71847.1| ACYPI003451 [Acyrthosiphon pisum]
gi|239790590|dbj|BAH71848.1| ACYPI003451 [Acyrthosiphon pisum]
Length = 125
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/64 (79%), Positives = 61/64 (95%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL R++AFDRHCNMVLENVREMWTELPKTGKGKKKA V++D++ISKMFLRGDSVI+V+
Sbjct: 52 KLLARIKAFDRHCNMVLENVREMWTELPKTGKGKKKAKAVSRDKYISKMFLRGDSVILVV 111
Query: 91 RNPK 94
+NPK
Sbjct: 112 KNPK 115
>gi|346975454|gb|EGY18906.1| small nuclear ribonucleoprotein Sm D2 [Verticillium dahliae
VdLs.17]
Length = 122
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/65 (72%), Positives = 52/65 (80%), Gaps = 6/65 (9%)
Query: 31 QLLGRVRAFDRHCNMVLENV-----REMWTELPKTGKGKKKALPVNKDRFISKMFLRGDS 85
+LL RV+AFDRHCNMVLENV +EMWTE P+ GKK PVNKDRFISKMFLRGDS
Sbjct: 57 KLLARVKAFDRHCNMVLENVVRTRLKEMWTETPRNADGKK-GRPVNKDRFISKMFLRGDS 115
Query: 86 VIIVL 90
VI+VL
Sbjct: 116 VILVL 120
>gi|229366980|gb|ACQ58470.1| Small nuclear ribonucleoprotein Sm D2 [Anoplopoma fimbria]
Length = 118
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/63 (87%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLRGDSVIIVL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIIVL 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|171685514|ref|XP_001907698.1| hypothetical protein [Podospora anserina S mat+]
gi|170942718|emb|CAP68371.1| unnamed protein product [Podospora anserina S mat+]
Length = 116
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 50/60 (83%), Gaps = 2/60 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNM+LENV+EMWTE P KK PVNKDRFISKMFLRGDSVI+VL
Sbjct: 57 KLLARVKAFDRHCNMILENVKEMWTETPV--HNGKKGRPVNKDRFISKMFLRGDSVILVL 114
>gi|410909734|ref|XP_003968345.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Takifugu
rubripes]
Length = 124
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/63 (87%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLRGDSVIIVL
Sbjct: 57 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIIVL 116
Query: 91 RNP 93
RNP
Sbjct: 117 RNP 119
>gi|380800505|gb|AFE72128.1| small nuclear ribonucleoprotein Sm D2 isoform 1, partial [Macaca
mulatta]
Length = 89
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 22 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVL 81
Query: 91 RNP 93
RNP
Sbjct: 82 RNP 84
>gi|417408038|gb|JAA50593.1| Putative small nuclear ribonucleoprotein snrnp sm core protein,
partial [Desmodus rotundus]
Length = 140
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 73 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVL 132
Query: 91 RNP 93
RNP
Sbjct: 133 RNP 135
>gi|225704668|gb|ACO08180.1| Small nuclear ribonucleoprotein Sm D2 [Oncorhynchus mykiss]
Length = 118
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVL 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|348508217|ref|XP_003441651.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Oreochromis
niloticus]
Length = 118
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVL 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|345315929|ref|XP_001520002.2| PREDICTED: small nuclear ribonucleoprotein Sm D2-like
[Ornithorhynchus anatinus]
Length = 123
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 56 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVL 115
Query: 91 RNP 93
RNP
Sbjct: 116 RNP 118
>gi|354486715|ref|XP_003505524.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Cricetulus
griseus]
Length = 139
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/62 (77%), Positives = 57/62 (91%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+ KGKKK+ P+NK +ISKMFL GDSVI+VL
Sbjct: 72 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSDKGKKKSKPINKGHYISKMFLSGDSVIVVL 131
Query: 91 RN 92
RN
Sbjct: 132 RN 133
>gi|432893287|ref|XP_004075904.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Oryzias
latipes]
Length = 118
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVL 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|225715792|gb|ACO13742.1| Small nuclear ribonucleoprotein Sm D2 [Esox lucius]
Length = 121
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVL 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|209738048|gb|ACI69893.1| Small nuclear ribonucleoprotein Sm D2 [Salmo salar]
gi|221220052|gb|ACM08687.1| Small nuclear ribonucleoprotein Sm D2 [Salmo salar]
gi|221221714|gb|ACM09518.1| Small nuclear ribonucleoprotein Sm D2 [Salmo salar]
gi|303664033|gb|ADM16126.1| Small nuclear ribonucleoprotein Sm D2 [Salmo salar]
Length = 121
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVL 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|209731722|gb|ACI66730.1| Small nuclear ribonucleoprotein Sm D2 [Salmo salar]
gi|209733910|gb|ACI67824.1| Small nuclear ribonucleoprotein Sm D2 [Salmo salar]
gi|209737798|gb|ACI69768.1| Small nuclear ribonucleoprotein Sm D2 [Salmo salar]
gi|209738154|gb|ACI69946.1| Small nuclear ribonucleoprotein Sm D2 [Salmo salar]
gi|225704008|gb|ACO07850.1| Small nuclear ribonucleoprotein Sm D2 [Oncorhynchus mykiss]
gi|225705510|gb|ACO08601.1| Small nuclear ribonucleoprotein Sm D2 [Oncorhynchus mykiss]
gi|303663493|gb|ADM16106.1| Small nuclear ribonucleoprotein Sm D2 [Salmo salar]
Length = 118
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVL 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|225704522|gb|ACO08107.1| Small nuclear ribonucleoprotein Sm D2 [Oncorhynchus mykiss]
Length = 118
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVL 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|26337731|dbj|BAC32551.1| unnamed protein product [Mus musculus]
Length = 118
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVL 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|291290931|ref|NP_001167498.1| small nuclear ribonucleoprotein D2 polypeptide 16.5kDa [Xenopus
laevis]
gi|57032687|gb|AAH88924.1| Unknown (protein for MGC:85085) [Xenopus laevis]
Length = 118
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVL 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|52346166|ref|NP_001005128.1| small nuclear ribonucleoprotein D2 polypeptide 16.5kDa [Xenopus
(Silurana) tropicalis]
gi|50417589|gb|AAH77664.1| MGC89748 protein [Xenopus (Silurana) tropicalis]
gi|89272067|emb|CAJ81304.1| small nuclear ribonucleoprotein D2 polypeptide 16.5kDa [Xenopus
(Silurana) tropicalis]
gi|170285025|gb|AAI61312.1| MGC89748 protein [Xenopus (Silurana) tropicalis]
Length = 118
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVL 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|62955141|ref|NP_001017582.1| small nuclear ribonucleoprotein Sm D2 [Danio rerio]
gi|62204867|gb|AAH93003.1| Si:dkey-113g17.2 [Danio rerio]
gi|169145930|emb|CAQ13816.1| novel protein similar to vertebrate small nuclear ribonucleoprotein
D2 polypeptide 16.5kDa (SNRPD2) [Danio rerio]
gi|225706716|gb|ACO09204.1| Small nuclear ribonucleoprotein Sm D2 [Osmerus mordax]
Length = 118
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVL 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|281348790|gb|EFB24374.1| hypothetical protein PANDA_018526 [Ailuropoda melanoleuca]
gi|355703667|gb|EHH30158.1| hypothetical protein EGK_10765, partial [Macaca mulatta]
gi|440902304|gb|ELR53111.1| Small nuclear ribonucleoprotein Sm D2, partial [Bos grunniens
mutus]
Length = 117
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 50 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVL 109
Query: 91 RNP 93
RNP
Sbjct: 110 RNP 112
>gi|4759158|ref|NP_004588.1| small nuclear ribonucleoprotein Sm D2 isoform 1 [Homo sapiens]
gi|58037145|ref|NP_081219.1| small nuclear ribonucleoprotein Sm D2 [Mus musculus]
gi|77735903|ref|NP_001029648.1| small nuclear ribonucleoprotein Sm D2 [Bos taurus]
gi|157820925|ref|NP_001102869.1| small nuclear ribonucleoprotein Sm D2 [Rattus norvegicus]
gi|302191671|ref|NP_001180521.1| small nuclear ribonucleoprotein Sm D2 [Macaca mulatta]
gi|318085119|ref|NP_001187657.1| small nuclear ribonucleoprotein sm d2 [Ictalurus punctatus]
gi|343887362|ref|NP_001230582.1| small nuclear ribonucleoprotein Sm D2 [Sus scrofa]
gi|356991224|ref|NP_001239341.1| small nuclear ribonucleoprotein Sm D2 [Canis lupus familiaris]
gi|149722210|ref|XP_001502799.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Equus
caballus]
gi|291414848|ref|XP_002723659.1| PREDICTED: small nuclear ribonucleoprotein D2 [Oryctolagus
cuniculus]
gi|296234130|ref|XP_002762293.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Callithrix
jacchus]
gi|297705196|ref|XP_002829469.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 [Pongo abelii]
gi|301786280|ref|XP_002928550.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Ailuropoda
melanoleuca]
gi|327286749|ref|XP_003228092.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Anolis
carolinensis]
gi|334328787|ref|XP_001365173.2| PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Monodelphis
domestica]
gi|344269659|ref|XP_003406666.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Loxodonta
africana]
gi|348557650|ref|XP_003464632.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Cavia
porcellus]
gi|390465430|ref|XP_003733405.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Callithrix
jacchus]
gi|397493317|ref|XP_003817554.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 isoform 1 [Pan
paniscus]
gi|397493319|ref|XP_003817555.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 isoform 2 [Pan
paniscus]
gi|397493321|ref|XP_003817556.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 isoform 3 [Pan
paniscus]
gi|397493323|ref|XP_003817557.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 isoform 4 [Pan
paniscus]
gi|397493325|ref|XP_003817558.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 isoform 5 [Pan
paniscus]
gi|402905973|ref|XP_003915782.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 isoform 1 [Papio
anubis]
gi|403267451|ref|XP_003925846.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Saimiri
boliviensis boliviensis]
gi|403299046|ref|XP_003940303.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 [Saimiri
boliviensis boliviensis]
gi|410054097|ref|XP_003953576.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 [Pan troglodytes]
gi|410982696|ref|XP_003997684.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 isoform 1 [Felis
catus]
gi|426243035|ref|XP_004015372.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 [Ovis aries]
gi|426389216|ref|XP_004061020.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 isoform 1 [Gorilla
gorilla gorilla]
gi|426389218|ref|XP_004061021.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 isoform 2 [Gorilla
gorilla gorilla]
gi|426389220|ref|XP_004061022.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 isoform 3 [Gorilla
gorilla gorilla]
gi|441655899|ref|XP_004091080.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 [Nomascus
leucogenys]
gi|441655902|ref|XP_004091081.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 [Nomascus
leucogenys]
gi|441655911|ref|XP_004091083.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 [Nomascus
leucogenys]
gi|51338666|sp|P62316.1|SMD2_HUMAN RecName: Full=Small nuclear ribonucleoprotein Sm D2; Short=Sm-D2;
AltName: Full=snRNP core protein D2
gi|59800293|sp|P62317.1|SMD2_MOUSE RecName: Full=Small nuclear ribonucleoprotein Sm D2; Short=Sm-D2;
AltName: Full=snRNP core protein D2
gi|109894870|sp|Q3SZF8.1|SMD2_BOVIN RecName: Full=Small nuclear ribonucleoprotein Sm D2; Short=Sm-D2;
AltName: Full=snRNP core protein D2
gi|6980599|pdb|1B34|B Chain B, Crystal Structure Of The D1d2 Sub-Complex From The Human
Snrnp Core Domain
gi|225734043|pdb|3CW1|C Chain C, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734052|pdb|3CW1|P Chain P, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734061|pdb|3CW1|Q Chain Q, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734070|pdb|3CW1|R Chain R, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|315583603|pdb|3PGW|Y Chain Y, Crystal Structure Of Human U1 Snrnp
gi|315583612|pdb|3PGW|V Chain V, Crystal Structure Of Human U1 Snrnp
gi|332639435|pdb|2Y9A|C Chain C, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639442|pdb|2Y9A|J Chain J, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639449|pdb|2Y9A|Q Chain Q, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639459|pdb|2Y9B|C Chain C, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639466|pdb|2Y9B|J Chain J, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639473|pdb|2Y9B|Q Chain Q, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639483|pdb|2Y9C|C Chain C, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639490|pdb|2Y9C|J Chain J, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639497|pdb|2Y9C|Q Chain Q, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639507|pdb|2Y9D|C Chain C, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639514|pdb|2Y9D|J Chain J, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639521|pdb|2Y9D|Q Chain Q, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|343781211|pdb|3S6N|B Chain B, Crystal Structure Of The Gemin2-Binding Domain Of Smn,
Gemin2 In Complex With Smd1D2FEG FROM HUMAN
gi|444302197|pdb|4F7U|B Chain B, Macromolecular Machine 6
gi|444302199|pdb|4F7U|D Chain D, Macromolecular Machine 6
gi|453055423|pdb|1VU2|B Chain B, The 8s Snrnp Assembly Intermediate
gi|453055431|pdb|1VU2|J Chain J, The 8s Snrnp Assembly Intermediate
gi|453055439|pdb|1VU2|R Chain R, The 8s Snrnp Assembly Intermediate
gi|453055447|pdb|1VU2|Z Chain Z, The 8s Snrnp Assembly Intermediate
gi|453055455|pdb|1VU2|HH Chain h, The 8s Snrnp Assembly Intermediate
gi|453055463|pdb|1VU2|PP Chain p, The 8s Snrnp Assembly Intermediate
gi|453055475|pdb|1VU2|XX Chain x, The 8s Snrnp Assembly Intermediate
gi|453055479|pdb|1VU3|B Chain B, The 8s Snrnp Assembly Intermediate
gi|453055487|pdb|1VU3|J Chain J, The 8s Snrnp Assembly Intermediate
gi|453055495|pdb|1VU3|R Chain R, The 8s Snrnp Assembly Intermediate
gi|453055503|pdb|1VU3|Z Chain Z, The 8s Snrnp Assembly Intermediate
gi|453055511|pdb|1VU3|HH Chain h, The 8s Snrnp Assembly Intermediate
gi|453055519|pdb|1VU3|PP Chain p, The 8s Snrnp Assembly Intermediate
gi|453056011|pdb|4F77|J Chain J, The 8s Snrnp Assembly Intermediate
gi|453056019|pdb|4F77|B Chain B, The 8s Snrnp Assembly Intermediate
gi|453056027|pdb|4F77|R Chain R, The 8s Snrnp Assembly Intermediate
gi|453056035|pdb|4F77|Z Chain Z, The 8s Snrnp Assembly Intermediate
gi|453056043|pdb|4F77|HH Chain h, The 8s Snrnp Assembly Intermediate
gi|453056051|pdb|4F77|PP Chain p, The 8s Snrnp Assembly Intermediate
gi|453056063|pdb|4F77|XX Chain x, The 8s Snrnp Assembly Intermediate
gi|4558644|gb|AAD22673.1|AC007191_1 SMD2_HUMAN [Homo sapiens]
gi|600748|gb|AAC13776.1| Sm D2 [Homo sapiens]
gi|12653431|gb|AAH00486.1| Small nuclear ribonucleoprotein D2 polypeptide 16.5kDa [Homo
sapiens]
gi|12804955|gb|AAH01930.1| Small nuclear ribonucleoprotein D2 polypeptide 16.5kDa [Homo
sapiens]
gi|12840909|dbj|BAB25006.1| unnamed protein product [Mus musculus]
gi|26353034|dbj|BAC40147.1| unnamed protein product [Mus musculus]
gi|27696661|gb|AAH43014.1| Small nuclear ribonucleoprotein D2 [Mus musculus]
gi|30109280|gb|AAH51208.1| Small nuclear ribonucleoprotein D2 [Mus musculus]
gi|74354236|gb|AAI02878.1| Small nuclear ribonucleoprotein D2 polypeptide 16.5kDa [Bos taurus]
gi|109734134|gb|AAI16859.1| Small nuclear ribonucleoprotein D2 [Mus musculus]
gi|109734137|gb|AAI16861.1| Small nuclear ribonucleoprotein D2 [Mus musculus]
gi|119577777|gb|EAW57373.1| small nuclear ribonucleoprotein D2 polypeptide 16.5kDa, isoform
CRA_a [Homo sapiens]
gi|123980686|gb|ABM82172.1| small nuclear ribonucleoprotein D2 polypeptide 16.5kDa [synthetic
construct]
gi|123995513|gb|ABM85358.1| small nuclear ribonucleoprotein D2 polypeptide 16.5kDa [synthetic
construct]
gi|148691165|gb|EDL23112.1| mCG4862 [Mus musculus]
gi|149056801|gb|EDM08232.1| rCG54604 [Rattus norvegicus]
gi|158257256|dbj|BAF84601.1| unnamed protein product [Homo sapiens]
gi|197245986|gb|AAI68781.1| Small nuclear ribonucleoprotein D2 [Rattus norvegicus]
gi|208967434|dbj|BAG73731.1| small nuclear ribonucleoprotein D2 polypeptide [synthetic
construct]
gi|296477468|tpg|DAA19583.1| TPA: small nuclear ribonucleoprotein Sm D2 [Bos taurus]
gi|308323619|gb|ADO28945.1| small nuclear ribonucleoprotein sm d2 [Ictalurus punctatus]
gi|383412347|gb|AFH29387.1| small nuclear ribonucleoprotein Sm D2 isoform 1 [Macaca mulatta]
gi|387018126|gb|AFJ51181.1| Small nuclear ribonucleoprotein Sm D2 [Crotalus adamanteus]
gi|387542088|gb|AFJ71671.1| small nuclear ribonucleoprotein Sm D2 isoform 1 [Macaca mulatta]
gi|410291960|gb|JAA24580.1| small nuclear ribonucleoprotein D2 polypeptide 16.5kDa [Pan
troglodytes]
gi|410332637|gb|JAA35265.1| small nuclear ribonucleoprotein D2 polypeptide 16.5kDa [Pan
troglodytes]
Length = 118
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVL 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|221221306|gb|ACM09314.1| Small nuclear ribonucleoprotein Sm D2 [Salmo salar]
Length = 121
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVL 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|109085944|ref|XP_001108236.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Macaca
mulatta]
Length = 118
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVL 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|431909174|gb|ELK12764.1| Small nuclear ribonucleoprotein Sm D2 [Pteropus alecto]
Length = 138
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 71 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVL 130
Query: 91 RNP 93
RNP
Sbjct: 131 RNP 133
>gi|60834798|gb|AAX37111.1| small nuclear ribonucleoprotein D2 polypeptide [synthetic
construct]
Length = 119
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVL 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|444730749|gb|ELW71123.1| Small nuclear ribonucleoprotein Sm D2 [Tupaia chinensis]
Length = 149
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 82 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVL 141
Query: 91 RNP 93
RNP
Sbjct: 142 RNP 144
>gi|225704950|gb|ACO08321.1| Small nuclear ribonucleoprotein Sm D2 [Oncorhynchus mykiss]
Length = 118
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLRGDS+I+VL
Sbjct: 51 ELLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSIIVVL 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|344249248|gb|EGW05352.1| Small nuclear ribonucleoprotein Sm D2 [Cricetulus griseus]
Length = 108
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/62 (77%), Positives = 57/62 (91%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+ KGKKK+ P+NK +ISKMFL GDSVI+VL
Sbjct: 41 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSDKGKKKSKPINKGHYISKMFLSGDSVIVVL 100
Query: 91 RN 92
RN
Sbjct: 101 RN 102
>gi|225705318|gb|ACO08505.1| Small nuclear ribonucleoprotein Sm D2 [Oncorhynchus mykiss]
Length = 111
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 41 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVL 100
Query: 91 RNP 93
RNP
Sbjct: 101 RNP 103
>gi|237649049|ref|NP_808210.2| small nuclear ribonucleoprotein Sm D2 isoform 2 [Homo sapiens]
gi|332257074|ref|XP_003277641.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 isoform 4
[Nomascus leucogenys]
gi|332257076|ref|XP_003277642.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 isoform 5
[Nomascus leucogenys]
gi|332856260|ref|XP_001166252.2| PREDICTED: small nuclear ribonucleoprotein Sm D2 isoform 4 [Pan
troglodytes]
gi|395854166|ref|XP_003799569.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 [Otolemur
garnettii]
gi|397493327|ref|XP_003817559.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 isoform 6 [Pan
paniscus]
gi|402905975|ref|XP_003915783.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 isoform 2 [Papio
anubis]
gi|410054100|ref|XP_003953577.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 [Pan troglodytes]
gi|410982698|ref|XP_003997685.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 isoform 2 [Felis
catus]
gi|426389224|ref|XP_004061024.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 isoform 5 [Gorilla
gorilla gorilla]
gi|426389226|ref|XP_004061025.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 isoform 6 [Gorilla
gorilla gorilla]
gi|441655907|ref|XP_004091082.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 [Nomascus
leucogenys]
gi|119577778|gb|EAW57374.1| small nuclear ribonucleoprotein D2 polypeptide 16.5kDa, isoform
CRA_b [Homo sapiens]
gi|351697916|gb|EHB00835.1| Small nuclear ribonucleoprotein Sm D2 [Heterocephalus glaber]
gi|432101631|gb|ELK29680.1| Small nuclear ribonucleoprotein Sm D2 [Myotis davidii]
Length = 108
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 41 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVL 100
Query: 91 RNP 93
RNP
Sbjct: 101 RNP 103
>gi|225703700|gb|ACO07696.1| Small nuclear ribonucleoprotein Sm D2 [Oncorhynchus mykiss]
Length = 118
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR++SKMFLRGDSVI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYVSKMFLRGDSVIVVL 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|225704396|gb|ACO08044.1| Small nuclear ribonucleoprotein Sm D2 [Oncorhynchus mykiss]
Length = 118
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR++SKMFLRGDSVI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYVSKMFLRGDSVIVVL 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|239788764|dbj|BAH71046.1| ACYPI003451 [Acyrthosiphon pisum]
Length = 125
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/64 (79%), Positives = 60/64 (93%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL R++AFDRHCNMVLENVREMWTELPKTGKGKKKA V++D++ISKMFLRGDSVI+V+
Sbjct: 52 KLLARIKAFDRHCNMVLENVREMWTELPKTGKGKKKAKAVSRDKYISKMFLRGDSVILVV 111
Query: 91 RNPK 94
NPK
Sbjct: 112 MNPK 115
>gi|308322523|gb|ADO28399.1| small nuclear ribonucleoprotein sm d2 [Ictalurus furcatus]
Length = 123
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 56 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVL 115
Query: 91 RNP 93
RNP
Sbjct: 116 RNP 118
>gi|426389222|ref|XP_004061023.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 isoform 4 [Gorilla
gorilla gorilla]
Length = 136
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 69 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVL 128
Query: 91 RNP 93
RNP
Sbjct: 129 RNP 131
>gi|340368003|ref|XP_003382542.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like
[Amphimedon queenslandica]
Length = 119
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 59/63 (93%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRH NMVLENV+EMWTE PKTGKGKKKA PVNKDRFI+KMF+RGDSVI+VL
Sbjct: 50 KLLARVKAFDRHFNMVLENVKEMWTETPKTGKGKKKARPVNKDRFIAKMFIRGDSVILVL 109
Query: 91 RNP 93
RNP
Sbjct: 110 RNP 112
>gi|225709580|gb|ACO10636.1| Small nuclear ribonucleoprotein Sm D2 [Caligus rogercresseyi]
Length = 121
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVN+DR+ISKMFLRGDSVI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNRDRYISKMFLRGDSVIVVL 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|213405485|ref|XP_002173514.1| small nuclear ribonucleoprotein Sm D2 [Schizosaccharomyces
japonicus yFS275]
gi|212001561|gb|EEB07221.1| small nuclear ribonucleoprotein Sm D2 [Schizosaccharomyces
japonicus yFS275]
Length = 114
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/63 (69%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRH NMVLENV+EMWTE KT G KK P+N+DRFISKMFLRGD V++V+
Sbjct: 52 KLLARVKAFDRHSNMVLENVKEMWTERRKTSSG-KKGKPINRDRFISKMFLRGDGVVLVV 110
Query: 91 RNP 93
R P
Sbjct: 111 RIP 113
>gi|17558868|ref|NP_506004.1| Protein SNR-4 [Caenorhabditis elegans]
gi|2833296|sp|Q18786.1|SMD2_CAEEL RecName: Full=Probable small nuclear ribonucleoprotein Sm D2;
Short=Sm-D2; AltName: Full=snRNP core protein D2
gi|3875190|emb|CAB01413.1| Protein SNR-4 [Caenorhabditis elegans]
Length = 118
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 60/63 (95%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PKTGKGKKKA V KDRFISKMFLRGDSVI+V+
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEVPKTGKGKKKAKSVAKDRFISKMFLRGDSVILVV 110
Query: 91 RNP 93
+NP
Sbjct: 111 KNP 113
>gi|308503579|ref|XP_003113973.1| CRE-SNR-4 protein [Caenorhabditis remanei]
gi|308261358|gb|EFP05311.1| CRE-SNR-4 protein [Caenorhabditis remanei]
Length = 118
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 60/63 (95%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PKTGKGKKKA V KDRFISKMFLRGDSVI+V+
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEVPKTGKGKKKAKSVAKDRFISKMFLRGDSVILVV 110
Query: 91 RNP 93
+NP
Sbjct: 111 KNP 113
>gi|341904454|gb|EGT60287.1| CBN-SNR-4 protein [Caenorhabditis brenneri]
Length = 118
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 60/63 (95%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PKTGKGKKKA V KDRFISKMFLRGDSVI+V+
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEVPKTGKGKKKAKSVAKDRFISKMFLRGDSVILVV 110
Query: 91 RNP 93
+NP
Sbjct: 111 KNP 113
>gi|395529567|ref|XP_003766882.1| PREDICTED: uncharacterized protein LOC100930002 [Sarcophilus
harrisii]
Length = 242
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 61/63 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKD +ISKMFLRGDSVI+VL
Sbjct: 175 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDHYISKMFLRGDSVIVVL 234
Query: 91 RNP 93
RNP
Sbjct: 235 RNP 237
>gi|268557296|ref|XP_002636637.1| C. briggsae CBR-SNR-4 protein [Caenorhabditis briggsae]
Length = 118
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 60/63 (95%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PKTGKGKKKA V KDRFISKMFLRGDSVI+V+
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEVPKTGKGKKKAKSVAKDRFISKMFLRGDSVILVV 110
Query: 91 RNP 93
+NP
Sbjct: 111 KNP 113
>gi|441600622|ref|XP_004087625.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like isoform 1
[Nomascus leucogenys]
gi|441600625|ref|XP_004087626.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like isoform 2
[Nomascus leucogenys]
Length = 118
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/63 (74%), Positives = 57/63 (90%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLG V+AF+RHCNMVLEN++EMWTE+PK+ KGKKK+ PVNKD +ISKMFL GD VI+VL
Sbjct: 51 KLLGHVKAFERHCNMVLENMKEMWTEVPKSSKGKKKSKPVNKDCYISKMFLHGDLVIVVL 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|148692587|gb|EDL24534.1| mCG49049 [Mus musculus]
Length = 118
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 61/63 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLRGD VI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDLVIVVL 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|312078721|ref|XP_003141861.1| small Nuclear Ribonucleoprotein family member [Loa loa]
gi|307762971|gb|EFO22205.1| small nuclear ribonucleoprotein Sm D2 [Loa loa]
Length = 121
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/63 (88%), Positives = 61/63 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTELPKTGKGKKKA PV KDRFI+KMFLRGDSVIIVL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTELPKTGKGKKKAKPVAKDRFITKMFLRGDSVIIVL 110
Query: 91 RNP 93
+NP
Sbjct: 111 KNP 113
>gi|225714876|gb|ACO13284.1| Small nuclear ribonucleoprotein Sm D2 [Esox lucius]
Length = 121
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 61/63 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AF RHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 51 KLLGRVKAFGRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVL 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|296204251|ref|XP_002749249.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Callithrix
jacchus]
Length = 118
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/63 (82%), Positives = 61/63 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGR +AFDRHCNMVLEN++EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 51 KLLGRAKAFDRHCNMVLENMKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVL 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|225704758|gb|ACO08225.1| Small nuclear ribonucleoprotein Sm D2 [Oncorhynchus mykiss]
Length = 118
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/63 (82%), Positives = 61/63 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR++SKMF RGDSVI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYVSKMFQRGDSVIVVL 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|170594601|ref|XP_001902052.1| Chain B, Crystal Structure Of The D1d2 Sub-Complex From The Human
Snrnp Core Domain. [Brugia malayi]
gi|158590996|gb|EDP29611.1| Chain B, Crystal Structure Of The D1d2 Sub-Complex From The Human
Snrnp Core Domain., putative [Brugia malayi]
Length = 121
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/63 (87%), Positives = 61/63 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTELPKTGKGKKKA PV KDRFI+KMFLRGDSVII+L
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTELPKTGKGKKKAKPVAKDRFITKMFLRGDSVIIIL 110
Query: 91 RNP 93
+NP
Sbjct: 111 KNP 113
>gi|19115418|ref|NP_594506.1| Sm snRNP core protein Smd2 [Schizosaccharomyces pombe 972h-]
gi|12230558|sp|O14036.1|SMD2_SCHPO RecName: Full=Small nuclear ribonucleoprotein Sm D2; Short=Sm-D2;
AltName: Full=Complexed with cdc5 protein 9; AltName:
Full=snRNP core protein D2
gi|2414614|emb|CAB16363.1| Sm snRNP core protein Smd2 [Schizosaccharomyces pombe]
Length = 115
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRH NMVLENV+EMWTE +T G KK +NKDRFISKMFLRGD V++V+
Sbjct: 52 KLLARVKAFDRHSNMVLENVKEMWTEKKRTASG-KKGKAINKDRFISKMFLRGDGVVLVV 110
Query: 91 RNP 93
R P
Sbjct: 111 RIP 113
>gi|392576339|gb|EIW69470.1| hypothetical protein TREMEDRAFT_30560, partial [Tremella
mesenterica DSM 1558]
Length = 117
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 53/62 (85%), Gaps = 5/62 (8%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVII-V 89
+LL RV+AFDRH NMVLENV+EMWTE PK GKGKK +NKDRFISK+FLRGDSVI+ V
Sbjct: 51 KLLARVKAFDRHANMVLENVKEMWTETPK-GKGKK---TINKDRFISKLFLRGDSVILGV 106
Query: 90 LR 91
LR
Sbjct: 107 LR 108
>gi|302695697|ref|XP_003037527.1| hypothetical protein SCHCODRAFT_13757 [Schizophyllum commune H4-8]
gi|300111224|gb|EFJ02625.1| hypothetical protein SCHCODRAFT_13757 [Schizophyllum commune H4-8]
Length = 127
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/78 (62%), Positives = 55/78 (70%), Gaps = 20/78 (25%)
Query: 31 QLLGRVRAFDRHCNMVLENVRE----------------MWTELPKTGKGKKKALPVNKDR 74
+LL RV+AFDRH NMVLENV+E MWTE+PK GK KK PVNKDR
Sbjct: 52 KLLARVKAFDRHSNMVLENVKEARQFTFSLPLNAYTQQMWTEIPK-GKNKK---PVNKDR 107
Query: 75 FISKMFLRGDSVIIVLRN 92
FISKMFLRGDSVI++LRN
Sbjct: 108 FISKMFLRGDSVILILRN 125
>gi|296213417|ref|XP_002753261.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Callithrix
jacchus]
Length = 118
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 61/62 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVL 110
Query: 91 RN 92
RN
Sbjct: 111 RN 112
>gi|402587026|gb|EJW80962.1| small nuclear ribonucleoprotein Sm D2 [Wuchereria bancrofti]
Length = 111
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/63 (87%), Positives = 61/63 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTELPKTGKGKKKA PV KDRFI+KMFLRGDSVII+L
Sbjct: 41 KLLGRVKAFDRHCNMVLENVKEMWTELPKTGKGKKKAKPVAKDRFITKMFLRGDSVIIIL 100
Query: 91 RNP 93
+NP
Sbjct: 101 KNP 103
>gi|432102126|gb|ELK29935.1| Small nuclear ribonucleoprotein Sm D2 [Myotis davidii]
Length = 109
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 53/64 (82%), Gaps = 1/64 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLR-GDSVIIV 89
LLGRV+AFD H NMVLENV E+ TE+PK+ KG+KK+ PV+KDR+IS MF R GDSVI+
Sbjct: 41 NLLGRVKAFDGHYNMVLENVEELGTEVPKSDKGRKKSKPVHKDRYISAMFPRAGDSVIVG 100
Query: 90 LRNP 93
LR+P
Sbjct: 101 LRHP 104
>gi|403288352|ref|XP_003935370.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like isoform 1
[Saimiri boliviensis boliviensis]
gi|403288354|ref|XP_003935371.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like isoform 2
[Saimiri boliviensis boliviensis]
Length = 145
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/63 (82%), Positives = 61/63 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AF+RHCNMVLENV+E WTE+PK+GKGKKK+ PVNKDR+ISKMFLRGDSVI+VL
Sbjct: 51 KLLGRVKAFNRHCNMVLENVKETWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVL 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|399217363|emb|CCF74250.1| unnamed protein product [Babesia microti strain RI]
Length = 103
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 54/64 (84%), Gaps = 3/64 (4%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
++L RV+AFDRHCNM+L + REMWT + +G GK+K VNKDRFISKMFLRGDSVI+VL
Sbjct: 43 KILARVKAFDRHCNMILVDAREMWT-VKSSGGGKQKF--VNKDRFISKMFLRGDSVIVVL 99
Query: 91 RNPK 94
RNPK
Sbjct: 100 RNPK 103
>gi|324546471|gb|ADY49713.1| Small nuclear ribonucleoprotein Sm D2, partial [Ascaris suum]
Length = 120
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/63 (88%), Positives = 61/63 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTELPKTGKGKKKA PV KDRFISKMFLRGDSVI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTELPKTGKGKKKAKPVAKDRFISKMFLRGDSVILVL 110
Query: 91 RNP 93
+NP
Sbjct: 111 KNP 113
>gi|118388573|ref|XP_001027383.1| Sm protein [Tetrahymena thermophila]
gi|89309153|gb|EAS07141.1| Sm protein [Tetrahymena thermophila SB210]
Length = 103
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
++L +VRAFDRH NMVLENV EMWTE+P+ G KK+ P+ K+R+I+K+FLRGDSVI VL
Sbjct: 40 KMLAKVRAFDRHMNMVLENVLEMWTEVPRGSHG-KKSKPMKKERYITKLFLRGDSVIFVL 98
Query: 91 RNPK 94
+NP+
Sbjct: 99 KNPQ 102
>gi|109510075|ref|XP_001054247.1| PREDICTED: small nuclear ribonucleoprotein Sm D2 [Rattus
norvegicus]
gi|109512989|ref|XP_214847.2| PREDICTED: small nuclear ribonucleoprotein Sm D2 [Rattus
norvegicus]
Length = 118
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/63 (82%), Positives = 62/63 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+E+WTE+PK+GKGKKK+ PVNKDR+ISKMFLRG+SVI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEIWTEVPKSGKGKKKSKPVNKDRYISKMFLRGNSVIVVL 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|109131908|ref|XP_001099573.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Macaca
mulatta]
Length = 118
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 61/63 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLR DSVI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRRDSVIVVL 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|340501173|gb|EGR27984.1| small nuclear ribonucleoprotein sm d2, putative [Ichthyophthirius
multifiliis]
Length = 103
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
++L RVRAFDRH NMVLENV EMWTE+P+ G +K+ P+ K+R+ SKMFLRGDSVI VL
Sbjct: 40 KILARVRAFDRHMNMVLENVLEMWTEVPRGSHG-QKSKPMRKERYHSKMFLRGDSVIFVL 98
Query: 91 RNP 93
RNP
Sbjct: 99 RNP 101
>gi|378726124|gb|EHY52583.1| small nuclear ribonucleoprotein Sm D2 [Exophiala dermatitidis
NIH/UT8656]
Length = 100
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 49/60 (81%), Gaps = 5/60 (8%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE K K + VNKDRFISKMFLRGDSVI+VL
Sbjct: 44 KLLARVKAFDRHCNMVLENVKEMWTE-----KTKGNSKGVNKDRFISKMFLRGDSVILVL 98
>gi|169844304|ref|XP_001828873.1| pre-mRNA splicing factor [Coprinopsis cinerea okayama7#130]
gi|116509985|gb|EAU92880.1| pre-mRNA splicing factor [Coprinopsis cinerea okayama7#130]
Length = 130
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 54/81 (66%), Gaps = 23/81 (28%)
Query: 31 QLLGRVRAFDRHCNMVLENVRE-------------------MWTELPKTGKGKKKALPVN 71
+LL RV+AFDRH NMVLENV+E MWTE PK GK KK PVN
Sbjct: 52 KLLARVKAFDRHSNMVLENVKEERPSPFTTIQEPRLMVNSQMWTETPK-GKNKK---PVN 107
Query: 72 KDRFISKMFLRGDSVIIVLRN 92
KDRFISKMFLRGDSVI+VLRN
Sbjct: 108 KDRFISKMFLRGDSVILVLRN 128
>gi|189208117|ref|XP_001940392.1| small nuclear ribonucleoprotein Sm D2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|330933723|ref|XP_003304270.1| hypothetical protein PTT_16802 [Pyrenophora teres f. teres 0-1]
gi|187976485|gb|EDU43111.1| small nuclear ribonucleoprotein Sm D2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|311319198|gb|EFQ87625.1| hypothetical protein PTT_16802 [Pyrenophora teres f. teres 0-1]
gi|451847200|gb|EMD60508.1| hypothetical protein COCSADRAFT_163837 [Cochliobolus sativus
ND90Pr]
gi|451997866|gb|EMD90331.1| hypothetical protein COCHEDRAFT_1157376 [Cochliobolus
heterostrophus C5]
Length = 117
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
++L RV+AFDRHCNMVLEN +EMWTE P+ G VNKDRFISK+FLRGDSVI+VL
Sbjct: 57 KILARVKAFDRHCNMVLENAKEMWTETPRLANG-SYGRKVNKDRFISKLFLRGDSVILVL 115
>gi|396486327|ref|XP_003842389.1| similar to small nuclear ribonucleoprotein sm d2 [Leptosphaeria
maculans JN3]
gi|312218965|emb|CBX98910.1| similar to small nuclear ribonucleoprotein sm d2 [Leptosphaeria
maculans JN3]
Length = 117
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
++L RV+AFDRHCNMVLEN +EMWTE P+ G VNKDRFISK+FLRGDSVI+VL
Sbjct: 57 KILARVKAFDRHCNMVLENAKEMWTETPRLSNG-SMGRKVNKDRFISKLFLRGDSVILVL 115
>gi|355763191|gb|EHH62129.1| hypothetical protein EGM_20337, partial [Macaca fascicularis]
Length = 117
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/63 (82%), Positives = 60/63 (95%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKD +ISKMFLR DSVI+VL
Sbjct: 50 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDHYISKMFLRRDSVIVVL 109
Query: 91 RNP 93
RNP
Sbjct: 110 RNP 112
>gi|412990385|emb|CCO19703.1| Small nuclear ribonucleoprotein Sm D2 [Bathycoccus prasinos]
Length = 97
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 54/64 (84%), Gaps = 2/64 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRH N++LENV+E+WT+ + + + K P NKDRFISK+FLRGDS+I+VL
Sbjct: 36 KLLGRVKAFDRHLNLLLENVKEVWTD--RNSQKESKTPPSNKDRFISKLFLRGDSIILVL 93
Query: 91 RNPK 94
+NPK
Sbjct: 94 KNPK 97
>gi|156083176|ref|XP_001609072.1| small nuclear ribonucleoprotein [Babesia bovis T2Bo]
gi|154796322|gb|EDO05504.1| small nuclear ribonucleoprotein, putative [Babesia bovis]
Length = 162
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 54/64 (84%), Gaps = 3/64 (4%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRH NM+L +VREMWTE+ G GKKK + NKDR+IS++FLRGDSV++VL
Sbjct: 102 KLLGRVKAFDRHFNMILTDVREMWTEV-SGGGGKKKYM--NKDRYISRLFLRGDSVVVVL 158
Query: 91 RNPK 94
NPK
Sbjct: 159 SNPK 162
>gi|444724875|gb|ELW65462.1| Small nuclear ribonucleoprotein Sm D2 [Tupaia chinensis]
Length = 117
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 54/63 (85%), Gaps = 1/63 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+ KK+ PVNKDR+ISKMFLRGD VI+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEV-PKSGKGKKSKPVNKDRYISKMFLRGDLVIVVL 109
Query: 91 RNP 93
+NP
Sbjct: 110 QNP 112
>gi|109122268|ref|XP_001083377.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Macaca
mulatta]
Length = 118
Score = 87.4 bits (215), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/62 (82%), Positives = 60/62 (96%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLR DSV++VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRQDSVVLVL 110
Query: 91 RN 92
RN
Sbjct: 111 RN 112
>gi|67624703|ref|XP_668634.1| small nuclear ribonucleoprotein [Cryptosporidium hominis TU502]
gi|126649020|ref|XP_001388072.1| small nuclear ribonucleoprotein [Cryptosporidium parvum Iowa II]
gi|54659846|gb|EAL38408.1| small nuclear ribonucleoprotein [Cryptosporidium hominis]
gi|126117160|gb|EAZ51260.1| small nuclear ribonucleoprotein [Cryptosporidium parvum Iowa II]
Length = 106
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 54/63 (85%), Gaps = 1/63 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
++LGRV+AFDRHCN++L + RE+WTE K+GK K A +NKDRFISK+F+RGDSVI++L
Sbjct: 44 KILGRVKAFDRHCNLLLTDAREIWTESMKSGK-KGSAKYINKDRFISKLFVRGDSVILIL 102
Query: 91 RNP 93
++P
Sbjct: 103 KSP 105
>gi|209877963|ref|XP_002140423.1| LSM domain-containing protein [Cryptosporidium muris RN66]
gi|209556029|gb|EEA06074.1| LSM domain-containing protein [Cryptosporidium muris RN66]
Length = 111
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 3/66 (4%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALP---VNKDRFISKMFLRGDSVI 87
++LGRV+AFDRHCN++L +VRE+WTE KT +KK +NKDRFISK+F+RGDSVI
Sbjct: 45 KILGRVKAFDRHCNLLLTDVREIWTEAVKTNSSQKKKSSNRFINKDRFISKLFVRGDSVI 104
Query: 88 IVLRNP 93
++L++P
Sbjct: 105 LILKSP 110
>gi|349803317|gb|AEQ17131.1| putative small nuclear ribonucleoprotein sm d2 [Pipa carvalhoi]
Length = 116
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/58 (86%), Positives = 57/58 (98%)
Query: 36 VRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNP 93
V+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLRGDSVI+VLRNP
Sbjct: 54 VKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNP 111
>gi|50555361|ref|XP_505089.1| YALI0F06644p [Yarrowia lipolytica]
gi|49650959|emb|CAG77896.1| YALI0F06644p [Yarrowia lipolytica CLIB122]
Length = 115
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRH NMVLENV+EMWTE KT G K V KDRFISKMFLRGD+VI+V+
Sbjct: 55 KLLARVKAFDRHSNMVLENVKEMWTEKTKTASG-KPGKTVTKDRFISKMFLRGDTVILVV 113
>gi|344302812|gb|EGW33086.1| hypothetical protein SPAPADRAFT_60395 [Spathaspora passalidarum
NRRL Y-27907]
Length = 112
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 53/62 (85%), Gaps = 3/62 (4%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKK-KALPVNKDRFISKMFLRGDSVIIV 89
+L+ +V+AFDRHCN+VLENV+E+WTE K KGKK K+ P K+RF+SKMFLRGDSVII+
Sbjct: 52 KLIAKVKAFDRHCNLVLENVKELWTETVKNNKGKKIKSTP--KERFVSKMFLRGDSVIII 109
Query: 90 LR 91
++
Sbjct: 110 VK 111
>gi|126137433|ref|XP_001385240.1| hypothetical protein PICST_60825 [Scheffersomyces stipitis CBS
6054]
gi|126092462|gb|ABN67211.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 112
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 52/61 (85%), Gaps = 1/61 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+L+G+VRAFDRHCN++LENV+E+WTE K KGK ++++RFISK+FLRGDS++I+L
Sbjct: 52 KLIGKVRAFDRHCNLILENVKELWTETSKNNKGKATK-SISRERFISKLFLRGDSIVIIL 110
Query: 91 R 91
+
Sbjct: 111 K 111
>gi|300175427|emb|CBK20738.2| unnamed protein product [Blastocystis hominis]
Length = 457
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 45/63 (71%), Positives = 55/63 (87%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL V+AFDRHCNMVLENV+E+WTE+PK+GKGKKKA + KDRFI K+FLRGDSV++V
Sbjct: 391 KLLCHVKAFDRHCNMVLENVKEIWTEVPKSGKGKKKAKAITKDRFIPKLFLRGDSVVVVC 450
Query: 91 RNP 93
NP
Sbjct: 451 SNP 453
>gi|315042035|ref|XP_003170394.1| hypothetical protein MGYG_07638 [Arthroderma gypseum CBS 118893]
gi|311345428|gb|EFR04631.1| hypothetical protein MGYG_07638 [Arthroderma gypseum CBS 118893]
Length = 135
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 47/60 (78%), Gaps = 4/60 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE K VNKDRFISKMFLRGDSVI+VL
Sbjct: 78 KLLARVKAFDRHCNMVLENVKEMWTEK----PKGGKGKGVNKDRFISKMFLRGDSVILVL 133
>gi|146421306|ref|XP_001486603.1| hypothetical protein PGUG_02274 [Meyerozyma guilliermondii ATCC
6260]
gi|146390018|gb|EDK38176.1| hypothetical protein PGUG_02274 [Meyerozyma guilliermondii ATCC
6260]
Length = 112
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 52/61 (85%), Gaps = 1/61 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+++ RV+AFDRHCNMVLENV+E+WTE K GKG K V+K+RF+SK+FLRGDSV+IV+
Sbjct: 52 KMVARVKAFDRHCNMVLENVKELWTESVKNGKG-KVVNSVSKERFVSKLFLRGDSVVIVV 110
Query: 91 R 91
+
Sbjct: 111 K 111
>gi|148709180|gb|EDL41126.1| mCG49198 [Mus musculus]
Length = 118
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/63 (79%), Positives = 59/63 (93%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNK+ +ISKMFL GDS I+VL
Sbjct: 51 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKNCYISKMFLHGDSFIVVL 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|50423747|ref|XP_460458.1| DEHA2F02156p [Debaryomyces hansenii CBS767]
gi|49656127|emb|CAG88765.1| DEHA2F02156p [Debaryomyces hansenii CBS767]
Length = 115
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+L+ +V+AFDRHCN++LENV+E+WTE K KG KK +K+RF+SKMFLRGDSV+IVL
Sbjct: 52 KLIAKVKAFDRHCNLILENVKELWTESVKNNKG-KKIKSTSKERFVSKMFLRGDSVVIVL 110
Query: 91 R 91
+
Sbjct: 111 K 111
>gi|397621815|gb|EJK66477.1| hypothetical protein THAOC_12605 [Thalassiosira oceanica]
Length = 112
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 55/63 (87%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+A+DRH N++LE+V+EMWTE K GKGKK+ VNKDR++SKMFLRGDSVI+V+
Sbjct: 42 KLLGRVKAYDRHMNLLLEDVKEMWTEQSKGGKGKKRGTSVNKDRYVSKMFLRGDSVILVV 101
Query: 91 RNP 93
NP
Sbjct: 102 SNP 104
>gi|71031308|ref|XP_765296.1| small nuclear ribonucleoprotein D2 [Theileria parva strain Muguga]
gi|68352252|gb|EAN33013.1| small nuclear ribonucleoprotein D2, putative [Theileria parva]
Length = 106
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 52/64 (81%), Gaps = 3/64 (4%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
++L RV+AFDRHCNM+L NVREMWT K G GKKK KDRF+S++FLRGDSVI+VL
Sbjct: 46 KILARVKAFDRHCNMILTNVREMWTVRGK-GTGKKKL--ETKDRFLSRLFLRGDSVIVVL 102
Query: 91 RNPK 94
+NPK
Sbjct: 103 KNPK 106
>gi|50787671|emb|CAH04406.1| small nuclear riboprotein Sm D2 [Euplotes vannus]
Length = 113
Score = 84.7 bits (208), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 53/64 (82%), Gaps = 1/64 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL R +AFDRH NMVLENV EMWTE+PK + KK PVNK+RFI K+FLRGDSVI+V+
Sbjct: 51 KLLARCKAFDRHMNMVLENVCEMWTEMPKK-QKGKKTKPVNKERFIHKLFLRGDSVILVI 109
Query: 91 RNPK 94
+NPK
Sbjct: 110 KNPK 113
>gi|448118540|ref|XP_004203524.1| Piso0_001135 [Millerozyma farinosa CBS 7064]
gi|448120946|ref|XP_004204107.1| Piso0_001135 [Millerozyma farinosa CBS 7064]
gi|359384392|emb|CCE79096.1| Piso0_001135 [Millerozyma farinosa CBS 7064]
gi|359384975|emb|CCE78510.1| Piso0_001135 [Millerozyma farinosa CBS 7064]
Length = 113
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 52/61 (85%), Gaps = 1/61 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+L+ RV+AFDRHCN++LENV+E+WTE + KG +K ++K+RF+SKMFLRGDSVIIVL
Sbjct: 52 KLVARVKAFDRHCNLILENVKELWTESVRNNKG-QKVNSISKERFVSKMFLRGDSVIIVL 110
Query: 91 R 91
+
Sbjct: 111 K 111
>gi|296809754|ref|XP_002845215.1| small nuclear ribonucleoprotein Sm D2 [Arthroderma otae CBS 113480]
gi|327292564|ref|XP_003230980.1| small nuclear ribonucleoprotein SmD2 [Trichophyton rubrum CBS
118892]
gi|238842603|gb|EEQ32265.1| small nuclear ribonucleoprotein Sm D2 [Arthroderma otae CBS 113480]
gi|326466786|gb|EGD92239.1| small nuclear ribonucleoprotein SmD2 [Trichophyton rubrum CBS
118892]
Length = 114
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 47/60 (78%), Gaps = 4/60 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE K VNKDRFISKMFLRGDSVI+VL
Sbjct: 57 KLLARVKAFDRHCNMVLENVKEMWTEK----PKGGKGKGVNKDRFISKMFLRGDSVILVL 112
>gi|444705722|gb|ELW47114.1| Small nuclear ribonucleoprotein Sm D2 [Tupaia chinensis]
Length = 118
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/63 (77%), Positives = 57/63 (90%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCNM LEN++EMWTE PK+GKGKKK+ PVNKD +ISKMFL GDSVI+VL
Sbjct: 51 KLLGRVKAFDRHCNMALENMKEMWTEDPKSGKGKKKSKPVNKDGYISKMFLHGDSVIVVL 110
Query: 91 RNP 93
NP
Sbjct: 111 WNP 113
>gi|169779295|ref|XP_001824112.1| small nuclear ribonucleoprotein Sm D2 [Aspergillus oryzae RIB40]
gi|238499931|ref|XP_002381200.1| small nuclear ribonucleoprotein SmD2, putative [Aspergillus flavus
NRRL3357]
gi|83772851|dbj|BAE62979.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220692953|gb|EED49299.1| small nuclear ribonucleoprotein SmD2, putative [Aspergillus flavus
NRRL3357]
gi|391873159|gb|EIT82233.1| small nuclear ribonucleoprotein (snRNP) Sm core protein
[Aspergillus oryzae 3.042]
Length = 115
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 47/60 (78%), Gaps = 4/60 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE K VNKDRFISKMFLRGDSVI+VL
Sbjct: 58 RLLARVKAFDRHCNMVLENVKEMWTEK----PKGGKGKGVNKDRFISKMFLRGDSVILVL 113
>gi|154283173|ref|XP_001542382.1| small nuclear ribonucleoprotein Sm D2 [Ajellomyces capsulatus NAm1]
gi|150410562|gb|EDN05950.1| small nuclear ribonucleoprotein Sm D2 [Ajellomyces capsulatus NAm1]
Length = 103
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 49/60 (81%), Gaps = 4/60 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE PK K VNKDRF+SKMFLRGDSVI+VL
Sbjct: 46 KLLARVKAFDRHCNMVLENVKEMWTEKPKG----GKGKGVNKDRFVSKMFLRGDSVILVL 101
>gi|226295357|gb|EEH50777.1| small nuclear ribonucleoprotein Sm D2 [Paracoccidioides
brasiliensis Pb18]
Length = 114
Score = 84.0 bits (206), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 49/60 (81%), Gaps = 4/60 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE PK K VNKDRF+SKMFLRGDSVI+VL
Sbjct: 57 KLLARVKAFDRHCNMVLENVKEMWTEKPKG----GKGKGVNKDRFVSKMFLRGDSVILVL 112
>gi|295670567|ref|XP_002795831.1| small nuclear ribonucleoprotein Sm D2 [Paracoccidioides sp.
'lutzii' Pb01]
gi|225677515|gb|EEH15799.1| small nuclear ribonucleoprotein Sm D2 [Paracoccidioides
brasiliensis Pb03]
gi|226284916|gb|EEH40482.1| small nuclear ribonucleoprotein Sm D2 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 114
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 49/60 (81%), Gaps = 4/60 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE PK K VNKDRF+SKMFLRGDSVI+VL
Sbjct: 57 KLLARVKAFDRHCNMVLENVKEMWTEKPKG----GKGKGVNKDRFVSKMFLRGDSVILVL 112
>gi|261189633|ref|XP_002621227.1| small nuclear ribonucleoprotein Sm D2 [Ajellomyces dermatitidis
SLH14081]
gi|225561709|gb|EEH09989.1| small nuclear ribonucleoprotein Sm D2 [Ajellomyces capsulatus
G186AR]
gi|239591463|gb|EEQ74044.1| small nuclear ribonucleoprotein Sm D2 [Ajellomyces dermatitidis
SLH14081]
gi|239613006|gb|EEQ89993.1| small nuclear ribonucleoprotein Sm D2 [Ajellomyces dermatitidis
ER-3]
gi|240275314|gb|EER38828.1| small nuclear ribonucleoprotein [Ajellomyces capsulatus H143]
Length = 114
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 49/60 (81%), Gaps = 4/60 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE PK K VNKDRF+SKMFLRGDSVI+VL
Sbjct: 57 KLLARVKAFDRHCNMVLENVKEMWTEKPKG----GKGKGVNKDRFVSKMFLRGDSVILVL 112
>gi|258567138|ref|XP_002584313.1| small nuclear ribonucleoprotein Sm D2 [Uncinocarpus reesii 1704]
gi|237905759|gb|EEP80160.1| small nuclear ribonucleoprotein Sm D2 [Uncinocarpus reesii 1704]
Length = 114
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 49/60 (81%), Gaps = 4/60 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE PK K VNKDRF+SKMFLRGDSVI+VL
Sbjct: 57 KLLARVKAFDRHCNMVLENVKEMWTEKPKG----GKGKGVNKDRFVSKMFLRGDSVILVL 112
>gi|119174655|ref|XP_001239674.1| hypothetical protein CIMG_09295 [Coccidioides immitis RS]
gi|392869868|gb|EAS28397.2| small nuclear ribonucleoprotein Sm D2 [Coccidioides immitis RS]
Length = 114
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 49/60 (81%), Gaps = 4/60 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE PK K VNKDRF+SKMFLRGDSVI+VL
Sbjct: 57 KLLARVKAFDRHCNMVLENVKEMWTEKPKG----GKGKGVNKDRFVSKMFLRGDSVILVL 112
>gi|325091149|gb|EGC44459.1| small nuclear ribonucleoprotein Sm D2 [Ajellomyces capsulatus H88]
Length = 187
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 47/60 (78%), Gaps = 4/60 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE K VNKDRF+SKMFLRGDSVI+VL
Sbjct: 130 KLLARVKAFDRHCNMVLENVKEMWTEK----PKGGKGKGVNKDRFVSKMFLRGDSVILVL 185
>gi|255718831|ref|XP_002555696.1| KLTH0G15246p [Lachancea thermotolerans]
gi|238937080|emb|CAR25259.1| KLTH0G15246p [Lachancea thermotolerans CBS 6340]
Length = 108
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 51/63 (80%), Gaps = 7/63 (11%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+++ RV+AFDRHCNMVLENV+E+WTE K KK VN++RFISK+FLRGDS+IIVL
Sbjct: 52 KIIARVKAFDRHCNMVLENVKELWTE-----KQNKKT--VNRERFISKLFLRGDSIIIVL 104
Query: 91 RNP 93
R P
Sbjct: 105 RAP 107
>gi|84994530|ref|XP_951987.1| small nuclear ribonucleoprotein [Theileria annulata strain Ankara]
gi|65302148|emb|CAI74255.1| small nuclear ribonucleoprotein, putative [Theileria annulata]
Length = 106
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 52/64 (81%), Gaps = 3/64 (4%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
++L RV+AFDRHCNM+L +VREMWT K G GKKK KDRFI+++FLRGDSVI+VL
Sbjct: 46 KILARVKAFDRHCNMILTDVREMWTVRGK-GTGKKKL--ETKDRFITRLFLRGDSVIVVL 102
Query: 91 RNPK 94
+NPK
Sbjct: 103 KNPK 106
>gi|403216466|emb|CCK70963.1| hypothetical protein KNAG_0F03010 [Kazachstania naganishii CBS
8797]
Length = 110
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 49/63 (77%), Gaps = 7/63 (11%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+++ RV+AFDRHCNMVLENV+E+WTE KK NK+RFISK+FLRGDSVII+L
Sbjct: 53 KIIARVKAFDRHCNMVLENVKELWTE-------KKHNKTTNKERFISKLFLRGDSVIIIL 105
Query: 91 RNP 93
+ P
Sbjct: 106 KAP 108
>gi|367005899|ref|XP_003687681.1| hypothetical protein TPHA_0K01130 [Tetrapisispora phaffii CBS 4417]
gi|357525986|emb|CCE65247.1| hypothetical protein TPHA_0K01130 [Tetrapisispora phaffii CBS 4417]
Length = 109
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 51/63 (80%), Gaps = 7/63 (11%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+++ RV+AFD+HCNMVLENV+E+WTE K K K +NK+RFISK+FLRGDSVIIVL
Sbjct: 52 KIIARVKAFDKHCNMVLENVKELWTE-----KNKDKV--INKERFISKLFLRGDSVIIVL 104
Query: 91 RNP 93
+ P
Sbjct: 105 KAP 107
>gi|254582138|ref|XP_002497054.1| ZYRO0D14366p [Zygosaccharomyces rouxii]
gi|238939946|emb|CAR28121.1| ZYRO0D14366p [Zygosaccharomyces rouxii]
Length = 110
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 52/63 (82%), Gaps = 7/63 (11%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+++ RV+AFDRHCNM+LENV+E+WTE KGK+ VNK+RFISK+FLRGDSVI++L
Sbjct: 53 KIIARVKAFDRHCNMILENVKELWTE----KKGKR---VVNKERFISKLFLRGDSVIVIL 105
Query: 91 RNP 93
+ P
Sbjct: 106 KAP 108
>gi|448517223|ref|XP_003867742.1| Smd2 core Sm protein [Candida orthopsilosis Co 90-125]
gi|380352081|emb|CCG22305.1| Smd2 core Sm protein [Candida orthopsilosis]
Length = 111
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 52/61 (85%), Gaps = 2/61 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+L+G++RAFDRHCN+VLENV+E+WTE K + K+ V+++RFISKMFLRGDSVII+L
Sbjct: 52 KLVGKIRAFDRHCNLVLENVKELWTETVKNEFNQTKS--VSRERFISKMFLRGDSVIIIL 109
Query: 91 R 91
+
Sbjct: 110 K 110
>gi|346325342|gb|EGX94939.1| small nuclear ribonucleoprotein Sm D2 [Cordyceps militaris CM01]
Length = 145
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 43/51 (84%), Gaps = 1/51 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFL 81
+LL RV+AFDRHCNMVLENV+EMWTE P+ G KK PVNKDRFISKM++
Sbjct: 82 KLLARVKAFDRHCNMVLENVKEMWTETPRLADG-KKGRPVNKDRFISKMYV 131
>gi|392297783|gb|EIW08882.1| Smd2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 80
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 51/63 (80%), Gaps = 7/63 (11%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+++ RV+AFDRHCNMVLENV+E+WTE K GK +N++RFISK+FLRGDSVI+VL
Sbjct: 23 KIIARVKAFDRHCNMVLENVKELWTE--KKGKN-----VINRERFISKLFLRGDSVIVVL 75
Query: 91 RNP 93
+ P
Sbjct: 76 KTP 78
>gi|410074971|ref|XP_003955068.1| hypothetical protein KAFR_0A04970 [Kazachstania africana CBS 2517]
gi|372461650|emb|CCF55933.1| hypothetical protein KAFR_0A04970 [Kazachstania africana CBS 2517]
Length = 114
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 51/63 (80%), Gaps = 7/63 (11%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+++ RV+AFDRHCNMVLENV+E+WTE K GK VN++RFISK+FLRGDSVI+VL
Sbjct: 57 KIIARVKAFDRHCNMVLENVKELWTE--KKGKS-----LVNRERFISKLFLRGDSVIVVL 109
Query: 91 RNP 93
+ P
Sbjct: 110 KAP 112
>gi|348572834|ref|XP_003472197.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Cavia
porcellus]
Length = 117
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/63 (69%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLG V+AFDRHCNMVLENV+EMWTE+ KK+ PVNKD +ISKMFL G+SVI+VL
Sbjct: 51 KLLGLVKAFDRHCNMVLENVKEMWTEV-PKSGKGKKSKPVNKDCYISKMFLHGESVIMVL 109
Query: 91 RNP 93
RNP
Sbjct: 110 RNP 112
>gi|212529808|ref|XP_002145061.1| small nuclear ribonucleoprotein SmD2, putative [Talaromyces
marneffei ATCC 18224]
gi|210074459|gb|EEA28546.1| small nuclear ribonucleoprotein SmD2, putative [Talaromyces
marneffei ATCC 18224]
Length = 117
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 47/59 (79%), Gaps = 4/59 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+LL RV+AFDRHCNMVLENV+EMWTE PK GKG+ VNKDRFISKM+ S++I+
Sbjct: 57 KLLARVKAFDRHCNMVLENVKEMWTEKPKGGKGRG----VNKDRFISKMYTSPASLLII 111
>gi|6323305|ref|NP_013377.1| Smd2p [Saccharomyces cerevisiae S288c]
gi|6226704|sp|Q06217.2|SMD2_YEAST RecName: Full=Small nuclear ribonucleoprotein Sm D2; Short=Sm-D2;
AltName: Full=snRNP core protein D2
gi|2340971|gb|AAB67368.1| Ylr275wp [Saccharomyces cerevisiae]
gi|151940982|gb|EDN59363.1| Sm D2 [Saccharomyces cerevisiae YJM789]
gi|190405334|gb|EDV08601.1| small nuclear ribonucleoprotein Sm D2 [Saccharomyces cerevisiae
RM11-1a]
gi|259148258|emb|CAY81505.1| Smd2p [Saccharomyces cerevisiae EC1118]
gi|285813692|tpg|DAA09588.1| TPA: Smd2p [Saccharomyces cerevisiae S288c]
gi|349579983|dbj|GAA25144.1| K7_Smd2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 110
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 51/63 (80%), Gaps = 7/63 (11%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+++ RV+AFDRHCNMVLENV+E+WTE K GK +N++RFISK+FLRGDSVI+VL
Sbjct: 53 KIIARVKAFDRHCNMVLENVKELWTE--KKGKN-----VINRERFISKLFLRGDSVIVVL 105
Query: 91 RNP 93
+ P
Sbjct: 106 KTP 108
>gi|50287515|ref|XP_446187.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525494|emb|CAG59111.1| unnamed protein product [Candida glabrata]
Length = 110
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+L+ RV+AFDRHCN+VLENV+E+WTE KK +N++RFISK+FLRGDSVI++L
Sbjct: 53 KLIARVKAFDRHCNLVLENVKELWTE-------KKNKQTINRERFISKLFLRGDSVIVIL 105
Query: 91 RNP 93
+ P
Sbjct: 106 KAP 108
>gi|156840670|ref|XP_001643714.1| hypothetical protein Kpol_1009p2 [Vanderwaltozyma polyspora DSM
70294]
gi|156114337|gb|EDO15856.1| hypothetical protein Kpol_1009p2 [Vanderwaltozyma polyspora DSM
70294]
Length = 109
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 51/63 (80%), Gaps = 7/63 (11%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+++ RV+AFDRHCNMVLENV+E+WTE KG K +NK+RFISK+FLRGDS+I++L
Sbjct: 52 KIIARVKAFDRHCNMVLENVKELWTE----KKGNKT---INKERFISKLFLRGDSIIVIL 104
Query: 91 RNP 93
+ P
Sbjct: 105 KAP 107
>gi|366992940|ref|XP_003676235.1| hypothetical protein NCAS_0D02930 [Naumovozyma castellii CBS 4309]
gi|342302101|emb|CCC69874.1| hypothetical protein NCAS_0D02930 [Naumovozyma castellii CBS 4309]
Length = 110
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 51/63 (80%), Gaps = 7/63 (11%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+++ RV+AFDRHCNMVLENV+E+WTE K GK VN++RFISK+FLRGDSVI+++
Sbjct: 53 KIIARVKAFDRHCNMVLENVKELWTE--KKGKS-----TVNRERFISKLFLRGDSVIVIV 105
Query: 91 RNP 93
+ P
Sbjct: 106 KAP 108
>gi|149245030|ref|XP_001527049.1| small nuclear ribonucleoprotein Sm D2 [Lodderomyces elongisporus
NRRL YB-4239]
gi|146449443|gb|EDK43699.1| small nuclear ribonucleoprotein Sm D2 [Lodderomyces elongisporus
NRRL YB-4239]
Length = 110
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 52/61 (85%), Gaps = 3/61 (4%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+L+G+VRAFDRHCN+VLENV+E+WTE T GK K +P ++RFISKMFLRGDSVIIV+
Sbjct: 52 KLVGKVRAFDRHCNLVLENVKELWTE-KVTEFGKTKNVP--RERFISKMFLRGDSVIIVV 108
Query: 91 R 91
+
Sbjct: 109 K 109
>gi|432118204|gb|ELK38063.1| Small nuclear ribonucleoprotein Sm D2 [Myotis davidii]
Length = 118
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/63 (69%), Positives = 54/63 (85%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLG V+AFDRHCNMVLENV+EMWT +PK+GK K+K+ VNKD +ISKMFL D VI+V+
Sbjct: 51 KLLGWVKAFDRHCNMVLENVKEMWTGVPKSGKSKEKSKTVNKDFYISKMFLHRDLVIVVM 110
Query: 91 RNP 93
RNP
Sbjct: 111 RNP 113
>gi|354543718|emb|CCE40440.1| hypothetical protein CPAR2_104760 [Candida parapsilosis]
Length = 111
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 52/61 (85%), Gaps = 2/61 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+L+G++RAFDRHCN+VLENV+E+WTE K + K+ V+++RFISK+FLRGDSVII+L
Sbjct: 52 KLVGKIRAFDRHCNLVLENVKELWTETVKNEFNQTKS--VSRERFISKLFLRGDSVIIIL 109
Query: 91 R 91
+
Sbjct: 110 K 110
>gi|363750444|ref|XP_003645439.1| hypothetical protein Ecym_3115 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889073|gb|AET38622.1| Hypothetical protein Ecym_3115 [Eremothecium cymbalariae
DBVPG#7215]
Length = 108
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 61/92 (66%), Gaps = 13/92 (14%)
Query: 8 FSFRNSQTTLMLFCFWALEFIVLQL------LGRVRAFDRHCNMVLENVREMWTELPKTG 61
F F++ +L+ + +++ L + R+++FDRHCNMVLENV+E+WTE
Sbjct: 23 FEFKHGPMSLLHDAMTSRSPVIISLRNNHKIIARIKSFDRHCNMVLENVKELWTE----K 78
Query: 62 KGKKKALPVNKDRFISKMFLRGDSVIIVLRNP 93
+GKK NK+RFISK+FLRGDSVI+VL+ P
Sbjct: 79 EGKKL---TNKERFISKLFLRGDSVIVVLKAP 107
>gi|365990359|ref|XP_003672009.1| hypothetical protein NDAI_0I01970 [Naumovozyma dairenensis CBS 421]
gi|343770783|emb|CCD26766.1| hypothetical protein NDAI_0I01970 [Naumovozyma dairenensis CBS 421]
Length = 110
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 52/63 (82%), Gaps = 7/63 (11%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+++ RV+AFDRHCNMVLENV+E+WTE KGK+ +N++RFISK+FLRGDS+I++L
Sbjct: 53 KIIARVKAFDRHCNMVLENVKELWTE----KKGKQ---IINRERFISKLFLRGDSIIVIL 105
Query: 91 RNP 93
+ P
Sbjct: 106 KAP 108
>gi|367016959|ref|XP_003682978.1| hypothetical protein TDEL_0G04000 [Torulaspora delbrueckii]
gi|359750641|emb|CCE93767.1| hypothetical protein TDEL_0G04000 [Torulaspora delbrueckii]
Length = 109
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+++ RV+AFDRHCNMVLENV+E+WTE +G K NK+RFISK+FLRGDSVI+VL
Sbjct: 52 KIIARVKAFDRHCNMVLENVKELWTE----KRGNKAE---NKERFISKLFLRGDSVIVVL 104
Query: 91 RNP 93
+ P
Sbjct: 105 KAP 107
>gi|444721759|gb|ELW62473.1| putative small nuclear ribonucleoprotein Sm D2 [Tupaia chinensis]
Length = 135
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 46/51 (90%), Gaps = 1/51 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFL 81
+++G ++AFDRHC+MVLENV+EMWTE+PK+ KG KK+ PVNKD +ISKMFL
Sbjct: 50 KVMGHMKAFDRHCDMVLENVKEMWTEVPKSRKG-KKSKPVNKDHYISKMFL 99
>gi|45201373|ref|NP_986943.1| AGR277Wp [Ashbya gossypii ATCC 10895]
gi|44986307|gb|AAS54767.1| AGR277Wp [Ashbya gossypii ATCC 10895]
gi|374110193|gb|AEY99098.1| FAGR277Wp [Ashbya gossypii FDAG1]
Length = 108
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 62/92 (67%), Gaps = 13/92 (14%)
Query: 8 FSFRNSQTTLMLFCFWALEFIVLQL------LGRVRAFDRHCNMVLENVREMWTELPKTG 61
F F++ +L+ A +++ L + RV++FDRHCNMVLENV+E+W+E
Sbjct: 23 FEFKHGPMSLIQEAMTARTPVIISLRNNHKIIARVKSFDRHCNMVLENVKEIWSE----R 78
Query: 62 KGKKKALPVNKDRFISKMFLRGDSVIIVLRNP 93
+GKK + NK+RFISK+FLRGDSVI+VL+ P
Sbjct: 79 EGKKIS---NKERFISKLFLRGDSVIVVLKAP 107
>gi|322696181|gb|EFY87977.1| small nuclear ribonucleoprotein Sm D2 [Metarhizium acridum CQMa
102]
Length = 120
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 41/49 (83%), Gaps = 1/49 (2%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKM 79
+LL RV+AFDRHCNMVLENV+EMWTE P+ G KK PVNKDRFISKM
Sbjct: 73 KLLARVKAFDRHCNMVLENVKEMWTETPRLADG-KKGRPVNKDRFISKM 120
>gi|444706234|gb|ELW47583.1| Small nuclear ribonucleoprotein Sm D2 [Tupaia chinensis]
Length = 86
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 58/63 (92%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLG V+AF+RHCN+VLEN++EMWTE+PK+GKGKKK+ PVNKD +ISKMFL GDSVIIVL
Sbjct: 19 KLLGHVKAFNRHCNVVLENLKEMWTEVPKSGKGKKKSKPVNKDCYISKMFLHGDSVIIVL 78
Query: 91 RNP 93
NP
Sbjct: 79 GNP 81
>gi|169614612|ref|XP_001800722.1| hypothetical protein SNOG_10452 [Phaeosphaeria nodorum SN15]
gi|160702782|gb|EAT81846.2| hypothetical protein SNOG_10452 [Phaeosphaeria nodorum SN15]
Length = 133
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 49/76 (64%), Gaps = 17/76 (22%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKM----------- 79
++L RV+AFDRHCNMVLEN +EMWTE P+ G + VNKDRFISK+
Sbjct: 57 KILARVKAFDRHCNMVLENAKEMWTETPRLANG-QYGRKVNKDRFISKLYVSSAFKTYAM 115
Query: 80 -----FLRGDSVIIVL 90
FLRGDSVI+VL
Sbjct: 116 LTASSFLRGDSVILVL 131
>gi|403253972|ref|XP_003919759.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Saimiri
boliviensis boliviensis]
Length = 117
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/63 (74%), Positives = 53/63 (84%), Gaps = 1/63 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
QLLGRV+AF RHCNMVLENV+EMWTE+PK+ KGKK KDR +SKMFLRGDSV +VL
Sbjct: 51 QLLGRVKAFHRHCNMVLENVKEMWTEVPKSSKGKKSKPVS-KDRRVSKMFLRGDSVTVVL 109
Query: 91 RNP 93
RNP
Sbjct: 110 RNP 112
>gi|344232757|gb|EGV64630.1| Sm-like ribonucleo protein [Candida tenuis ATCC 10573]
Length = 137
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 52/62 (83%), Gaps = 3/62 (4%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVN-KDRFISKMFLRGDSVIIV 89
+L+ +V+AFDRHCN++LENV+E+WTE K KG K + VN K+RF+SK+FLRGDSVI+V
Sbjct: 77 KLVAKVKAFDRHCNLILENVKELWTEPVKNNKG--KVIKVNQKERFVSKLFLRGDSVIVV 134
Query: 90 LR 91
++
Sbjct: 135 VK 136
>gi|444315235|ref|XP_004178275.1| hypothetical protein TBLA_0A09730 [Tetrapisispora blattae CBS 6284]
gi|387511314|emb|CCH58756.1| hypothetical protein TBLA_0A09730 [Tetrapisispora blattae CBS 6284]
Length = 109
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 61/93 (65%), Gaps = 13/93 (13%)
Query: 7 RFSFRNSQTTLMLFCFWALEFIVLQL------LGRVRAFDRHCNMVLENVREMWTELPKT 60
F F++ +L+ + I++ L + RV+AFD+HCNMVLENV+E+WTE
Sbjct: 22 EFEFKHGPMSLINDALISKTPIIISLRNNHKIIARVKAFDKHCNMVLENVKELWTE---- 77
Query: 61 GKGKKKALPVNKDRFISKMFLRGDSVIIVLRNP 93
G K +NK+RFISK+FLRGDSVI++L++P
Sbjct: 78 RNGNKL---INKERFISKLFLRGDSVIVILKSP 107
>gi|403414237|emb|CCM00937.1| predicted protein [Fibroporia radiculosa]
Length = 114
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 50/65 (76%), Gaps = 7/65 (10%)
Query: 31 QLLGRVRAFDRHCNMVLENVR---EMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVI 87
+LL RV+AFDRH + V+ +MWTELPK GK KK PVNKDRFISKMFLRGDSVI
Sbjct: 52 KLLARVKAFDRHSTGKCKRVQTFVQMWTELPK-GKNKK---PVNKDRFISKMFLRGDSVI 107
Query: 88 IVLRN 92
++LRN
Sbjct: 108 LILRN 112
>gi|260942737|ref|XP_002615667.1| hypothetical protein CLUG_04549 [Clavispora lusitaniae ATCC 42720]
gi|238850957|gb|EEQ40421.1| hypothetical protein CLUG_04549 [Clavispora lusitaniae ATCC 42720]
Length = 112
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 64/93 (68%), Gaps = 13/93 (13%)
Query: 1 MLVIQIRFSFRNSQTTLMLFCFWALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKT 60
M VIQ S N+ T +++ C +++G+V+AFDRHCN++LE+V+E+WTE +
Sbjct: 30 MSVIQ---SSMNNNTPVVVHCRNNH-----KVIGKVKAFDRHCNLILEDVKELWTETTRN 81
Query: 61 GKGK--KKALPVNKDRFISKMFLRGDSVIIVLR 91
KG K A +K+RFISK+FLRGDSVIIVL+
Sbjct: 82 SKGAVIKTA---SKERFISKLFLRGDSVIIVLK 111
>gi|429327958|gb|AFZ79718.1| hypothetical protein BEWA_025670 [Babesia equi]
Length = 921
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/58 (62%), Positives = 47/58 (81%), Gaps = 2/58 (3%)
Query: 36 VRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNP 93
V+AFDRHCNM+L + RE+WTE K G GKK+ + KDR +S++FLRGDSVI+VL+NP
Sbjct: 865 VKAFDRHCNMILTDARELWTETVKVG-GKKQRSSI-KDRHLSRVFLRGDSVIVVLKNP 920
>gi|313233805|emb|CBY09974.1| unnamed protein product [Oikopleura dioica]
Length = 53
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 45 MVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNP 93
MVLENV+EMW E PKT KGK PVN+DRFISKMFLRGDSVIIVL+NP
Sbjct: 1 MVLENVKEMWVERPKTSKGKG-GQPVNRDRFISKMFLRGDSVIIVLKNP 48
>gi|320583711|gb|EFW97924.1| Core Sm protein Sm D2 [Ogataea parapolymorpha DL-1]
Length = 110
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 50/62 (80%), Gaps = 4/62 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL +V+AFDRHCNM+LENV+E+WTE + KK + ++RF+SKMFLRGDSVI+VL
Sbjct: 52 KLLAKVKAFDRHCNMILENVKEIWTETNPDDRNKK----MMRERFVSKMFLRGDSVIVVL 107
Query: 91 RN 92
++
Sbjct: 108 KH 109
>gi|281209973|gb|EFA84141.1| LSM domain-containing protein [Polysphondylium pallidum PN500]
Length = 667
Score = 79.0 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 43/51 (84%), Positives = 48/51 (94%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFL 81
+LLG VRAFDRHCNMVLENV+EMWTE+PKTGKGKKKA PVNKDRFISK+ +
Sbjct: 42 KLLGTVRAFDRHCNMVLENVKEMWTEIPKTGKGKKKAKPVNKDRFISKILI 92
>gi|119570508|gb|EAW50123.1| hCG2040270 [Homo sapiens]
Length = 117
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLG V+AF RHCNMVLENV+E WTE+PK+ KK+ PVNKD +IS+MFL GD VI+VL
Sbjct: 51 KLLGHVKAFHRHCNMVLENVKETWTEVPKS-GKGKKSKPVNKDCYISRMFLHGDLVIVVL 109
Query: 91 RNP 93
RNP
Sbjct: 110 RNP 112
>gi|403222339|dbj|BAM40471.1| small nuclear ribonucleoprotein [Theileria orientalis strain
Shintoku]
Length = 105
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 50/64 (78%), Gaps = 4/64 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
++L RV+AFDRH NM+L +VREMWT KG KK + KDRFI+++FLRGDSVI+VL
Sbjct: 46 KILARVKAFDRHFNMILTDVREMWTV---KSKGNKKKMET-KDRFITRLFLRGDSVIVVL 101
Query: 91 RNPK 94
+NPK
Sbjct: 102 KNPK 105
>gi|259487148|tpe|CBF85589.1| TPA: small nuclear ribonucleoprotein SmD2, putative
(AFU_orthologue; AFUA_5G12910) [Aspergillus nidulans
FGSC A4]
Length = 113
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 42/51 (82%), Gaps = 4/51 (7%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFL 81
+LL RV+AFDRH NMVLENV+EMWTE K GKG+ PVNKDRFISKM+L
Sbjct: 57 KLLARVKAFDRHSNMVLENVKEMWTEPQKGGKGR----PVNKDRFISKMYL 103
>gi|12718491|emb|CAC28820.1| probable small nuclear ribonucleoprotein chain D2 [Neurospora
crassa]
Length = 126
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLR 82
++L RV+AFDRH NMVLENV+EMWTE P+ G KK PVNKDRFISKMF+
Sbjct: 59 KILARVKAFDRHMNMVLENVKEMWTETPRLANG-KKGKPVNKDRFISKMFVH 109
>gi|67470740|ref|XP_651333.1| small nuclear ribonucleoprotein Sm D2 [Entamoeba histolytica
HM-1:IMSS]
gi|167383658|ref|XP_001736617.1| small nuclear ribonucleoprotein sm D2 [Entamoeba dispar SAW760]
gi|167391078|ref|XP_001739631.1| small nuclear ribonucleoprotein sm D2 [Entamoeba dispar SAW760]
gi|56468055|gb|EAL45945.1| small nuclear ribonucleoprotein Sm D2, putative [Entamoeba
histolytica HM-1:IMSS]
gi|165896637|gb|EDR23988.1| small nuclear ribonucleoprotein sm D2, putative [Entamoeba dispar
SAW760]
gi|165900902|gb|EDR27123.1| small nuclear ribonucleoprotein sm D2, putative [Entamoeba dispar
SAW760]
gi|407040095|gb|EKE39972.1| LSM domain containing protein [Entamoeba nuttalli P19]
gi|449709579|gb|EMD48820.1| small nuclear ribonucleoprotein sm D2, putative [Entamoeba
histolytica KU27]
Length = 101
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 49/63 (77%), Gaps = 2/63 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+L+ RV+AFDRH NMVLEN++E+WTE+ + GK KA R ISKMFLRGDSVI+++
Sbjct: 35 KLICRVKAFDRHFNMVLENIKEIWTEMKRDSDGKLKAKLCQ--RSISKMFLRGDSVIVIV 92
Query: 91 RNP 93
+NP
Sbjct: 93 KNP 95
>gi|444729289|gb|ELW69714.1| Deleted in malignant brain tumors 1 protein [Tupaia chinensis]
Length = 1650
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 47/62 (75%), Positives = 57/62 (91%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLG V+AFDRH NMVLEN++E+WTE+PK+GKGKKK+ PVNKDR+ISKMFL GDSVI+VL
Sbjct: 1583 KLLGHVKAFDRHRNMVLENMKEIWTEVPKSGKGKKKSKPVNKDRYISKMFLCGDSVIVVL 1642
Query: 91 RN 92
N
Sbjct: 1643 WN 1644
>gi|440292632|gb|ELP85819.1| small nuclear ribonucleoprotein Sm D2, putative [Entamoeba
invadens IP1]
Length = 100
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 49/64 (76%), Gaps = 2/64 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+L+ RV+AFDRH NMVLENV+E WTE+ K +GK K P R +SKMFLRGDSVIIV+
Sbjct: 35 KLVCRVKAFDRHFNMVLENVKEYWTEMQKMPEGKPK--PKTCHRNVSKMFLRGDSVIIVV 92
Query: 91 RNPK 94
+ P+
Sbjct: 93 KAPE 96
>gi|50306997|ref|XP_453476.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642610|emb|CAH00572.1| KLLA0D09284p [Kluyveromyces lactis]
Length = 110
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 50/61 (81%), Gaps = 7/61 (11%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+L+ RV++FD+HCNMVLENV+E+WTE GKK VN++RF++K+FLRGDSVIIV+
Sbjct: 56 KLIARVKSFDKHCNMVLENVKEIWTE---NVNGKK----VNRERFVAKLFLRGDSVIIVV 108
Query: 91 R 91
+
Sbjct: 109 K 109
>gi|328350738|emb|CCA37138.1| Probable small nuclear ribonucleoprotein Sm D2 [Komagataella
pastoris CBS 7435]
Length = 108
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 48/63 (76%), Gaps = 7/63 (11%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+L+ +V+AFDRHCNMVLENV+E WT++ K V ++RF+SKMFLRGDSV+++L
Sbjct: 52 KLIAKVKAFDRHCNMVLENVKEFWTDINNGTK-------VTRERFVSKMFLRGDSVVVIL 104
Query: 91 RNP 93
++
Sbjct: 105 KHS 107
>gi|254566467|ref|XP_002490344.1| Core Sm protein Sm D2 [Komagataella pastoris GS115]
gi|238030140|emb|CAY68063.1| Core Sm protein Sm D2 [Komagataella pastoris GS115]
Length = 124
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 48/63 (76%), Gaps = 7/63 (11%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+L+ +V+AFDRHCNMVLENV+E WT++ K V ++RF+SKMFLRGDSV+++L
Sbjct: 68 KLIAKVKAFDRHCNMVLENVKEFWTDINNGTK-------VTRERFVSKMFLRGDSVVVIL 120
Query: 91 RNP 93
++
Sbjct: 121 KHS 123
>gi|154310658|ref|XP_001554660.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
Length = 116
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 43/50 (86%), Gaps = 3/50 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPK-TGKGKKKALPVNKDRFISKM 79
+LL RV+AFDRHCNMVLENV+EMWTE P+ +G GK + PVNKDRFISK+
Sbjct: 58 KLLARVKAFDRHCNMVLENVKEMWTETPRLSGGGKGR--PVNKDRFISKI 105
>gi|109089899|ref|XP_001087489.1| PREDICTED: small nuclear ribonucleoprotein Sm D2-like [Macaca
mulatta]
gi|355745907|gb|EHH50532.1| hypothetical protein EGM_01380 [Macaca fascicularis]
Length = 118
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/62 (77%), Positives = 56/62 (90%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLG V+AFDRH NMVLENV+EMWTE+PK+GKGKKK+ PVNKD +ISKMFL DSVI+VL
Sbjct: 51 KLLGHVKAFDRHRNMVLENVKEMWTEVPKSGKGKKKSKPVNKDCYISKMFLHRDSVIVVL 110
Query: 91 RN 92
RN
Sbjct: 111 RN 112
>gi|67522691|ref|XP_659406.1| hypothetical protein AN1802.2 [Aspergillus nidulans FGSC A4]
gi|40745811|gb|EAA64967.1| hypothetical protein AN1802.2 [Aspergillus nidulans FGSC A4]
Length = 73
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 40/49 (81%), Gaps = 4/49 (8%)
Query: 33 LGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFL 81
L RV+AFDRH NMVLENV+EMWTE K GKG+ PVNKDRFISKM+L
Sbjct: 19 LARVKAFDRHSNMVLENVKEMWTEPQKGGKGR----PVNKDRFISKMYL 63
>gi|116208252|ref|XP_001229935.1| predicted protein [Chaetomium globosum CBS 148.51]
gi|88184016|gb|EAQ91484.1| predicted protein [Chaetomium globosum CBS 148.51]
Length = 103
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 39/49 (79%), Gaps = 2/49 (4%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKM 79
+LL RV+AFDRHCNM+LENV+EMWTE P KK PVNKDRFISKM
Sbjct: 57 KLLARVKAFDRHCNMILENVKEMWTETP--VHNGKKGRPVNKDRFISKM 103
>gi|255724860|ref|XP_002547359.1| small nuclear ribonucleoprotein Sm D2 [Candida tropicalis MYA-3404]
gi|240135250|gb|EER34804.1| small nuclear ribonucleoprotein Sm D2 [Candida tropicalis MYA-3404]
Length = 112
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+L+G+VRAFDRHCN+VLENV+++W+E KK V K+RFISK+FLRGDSVII+L
Sbjct: 52 KLIGKVRAFDRHCNLVLENVKDLWSE-DIKNNKGKKIKSVPKERFISKLFLRGDSVIIIL 110
Query: 91 R 91
+
Sbjct: 111 K 111
>gi|238882386|gb|EEQ46024.1| small nuclear ribonucleoprotein Sm D2 [Candida albicans WO-1]
Length = 112
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+L+G+VRAFDRHCN+VLENV+E+WTE KK ++K+RFISKMFLRGDSVII+L
Sbjct: 52 KLIGKVRAFDRHCNLVLENVKELWTE-DIKNNKGKKIKSISKERFISKMFLRGDSVIIIL 110
Query: 91 R 91
+
Sbjct: 111 K 111
>gi|145509212|ref|XP_001440550.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407767|emb|CAK73153.1| unnamed protein product [Paramecium tetraurelia]
Length = 152
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 45/73 (61%), Gaps = 14/73 (19%)
Query: 33 LGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDR-----------FISKMFL 81
LGRV+AFDRH NM+LEN+ EMW E+ K KGK P K R +I KMFL
Sbjct: 83 LGRVKAFDRHMNMILENLTEMWIEISKETKGKS---PCYKQRKIQNQYKIIFYYIPKMFL 139
Query: 82 RGDSVIIVLRNPK 94
RGDSVI LRN K
Sbjct: 140 RGDSVIYTLRNLK 152
>gi|355562622|gb|EHH19216.1| hypothetical protein EGK_19888 [Macaca mulatta]
Length = 118
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 56/62 (90%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLG V+AFDRH NMVLE+V+EMWTE+PK+GKGKKK+ PVNKD +ISKMFL DSVI+VL
Sbjct: 51 KLLGHVKAFDRHRNMVLEDVKEMWTEVPKSGKGKKKSKPVNKDCYISKMFLHRDSVIVVL 110
Query: 91 RN 92
RN
Sbjct: 111 RN 112
>gi|241951640|ref|XP_002418542.1| small nuclear ribonucleoprotein sm d2, putative; small nuclear
riboucleoprotein (snrnp) core protein d2, putative
[Candida dubliniensis CD36]
gi|223641881|emb|CAX43844.1| small nuclear ribonucleoprotein sm d2, putative [Candida
dubliniensis CD36]
Length = 112
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+L+G+VRAFDRHCN+VLENV+E+WTE KK ++K+RFISK+FLRGDSVII+L
Sbjct: 52 KLIGKVRAFDRHCNLVLENVKELWTE-DIKNNKGKKIKSISKERFISKLFLRGDSVIIIL 110
Query: 91 R 91
+
Sbjct: 111 K 111
>gi|296418693|ref|XP_002838960.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634953|emb|CAZ83151.1| unnamed protein product [Tuber melanosporum]
Length = 96
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 41/60 (68%), Gaps = 17/60 (28%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLEN R PVNKDRFISKMFLRGDSVI+VL
Sbjct: 52 KLLARVKAFDRHCNMVLENGR-----------------PVNKDRFISKMFLRGDSVILVL 94
>gi|385303470|gb|EIF47543.1| small nuclear ribonucleoprotein sm d2 [Dekkera bruxellensis
AWRI1499]
Length = 136
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 46/62 (74%), Gaps = 4/62 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+L+ +V+AFDRHCNM+LENVRE W E + +K + ++RF+ KMFLRGDSVI++L
Sbjct: 52 KLIAKVKAFDRHCNMILENVREFWNETXPNDRKRK----IVRERFVLKMFLRGDSVIVIL 107
Query: 91 RN 92
+
Sbjct: 108 NH 109
>gi|326472609|gb|EGD96618.1| small nuclear ribonucleoprotein Sm D2 [Trichophyton tonsurans CBS
112818]
gi|326483579|gb|EGE07589.1| small nuclear ribonucleoprotein Sm D2 [Trichophyton equinum CBS
127.97]
Length = 129
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 47/86 (54%), Gaps = 30/86 (34%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKM----------- 79
+LL RV+AFDRHCNMVLENV+EMWTE K VNKDRFISKM
Sbjct: 46 KLLARVKAFDRHCNMVLENVKEMWTEK----PKGGKGKGVNKDRFISKMYVYTKLARTFP 101
Query: 80 ---------------FLRGDSVIIVL 90
FLRGDSVI+VL
Sbjct: 102 SHRICDNTILTRPSRFLRGDSVILVL 127
>gi|444721316|gb|ELW62058.1| putative small nuclear ribonucleoprotein Sm D2 [Tupaia chinensis]
Length = 165
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 54/81 (66%), Gaps = 8/81 (9%)
Query: 3 VIQIRFSFRNSQTTLMLFCFWALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKTGK 62
+ Q + F+NS T ++L C +LLGR +A DR CNMV +NV+E+W E+P++GK
Sbjct: 62 IGQAQEMFKNS-TQVLLDCRNQ------KLLGRAKALDRRCNMVPDNVKELWAEVPQSGK 114
Query: 63 GKKKALPVNKDRFISKMFLRG 83
G KK+ PV+KD +S+M L G
Sbjct: 115 G-KKSKPVHKDCHVSRMLLPG 134
>gi|194745332|ref|XP_001955142.1| GF18622 [Drosophila ananassae]
gi|190628179|gb|EDV43703.1| GF18622 [Drosophila ananassae]
Length = 56
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/49 (89%), Positives = 47/49 (95%)
Query: 45 MVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNP 93
MVLENV+EMWTELP+TGKGKKK PVNKDRFISKMFLRGDSVI+VLRNP
Sbjct: 1 MVLENVKEMWTELPRTGKGKKKVKPVNKDRFISKMFLRGDSVILVLRNP 49
>gi|47215802|emb|CAG02856.1| unnamed protein product [Tetraodon nigroviridis]
Length = 108
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/50 (84%), Positives = 49/50 (98%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMF 80
+LLGRV+AFDRHCNMVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMF
Sbjct: 50 KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMF 99
>gi|444720876|gb|ELW61643.1| Small nuclear ribonucleoprotein Sm D2 [Tupaia chinensis]
Length = 144
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 55/81 (67%), Gaps = 5/81 (6%)
Query: 13 SQTTLMLFCFWALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNK 72
+ T ++ CF+ ++LG V FDRH MVLENV+ M TE PK GK KKK+ PVNK
Sbjct: 8 NNTQELINCFYDK-----KILGCVETFDRHYTMVLENVKRMRTEFPKNGKDKKKSKPVNK 62
Query: 73 DRFISKMFLRGDSVIIVLRNP 93
DR+ISKMFL + I+VL+NP
Sbjct: 63 DRYISKMFLHRNVGIVVLQNP 83
>gi|242087889|ref|XP_002439777.1| hypothetical protein SORBIDRAFT_09g019920 [Sorghum bicolor]
gi|241945062|gb|EES18207.1| hypothetical protein SORBIDRAFT_09g019920 [Sorghum bicolor]
Length = 105
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/39 (82%), Positives = 37/39 (94%)
Query: 56 ELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 94
++PKTGKGKK ALPVNKDRFISK+FLRG+ VIIVLR+PK
Sbjct: 67 QVPKTGKGKKAALPVNKDRFISKIFLRGNRVIIVLRDPK 105
>gi|327352187|gb|EGE81044.1| small nuclear ribonucleoprotein Sm D2 [Ajellomyces dermatitidis
ATCC 18188]
Length = 131
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 4/62 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCNMVLENV+EMWTE K VNKDRF+SKM+++ ++ ++
Sbjct: 57 KLLARVKAFDRHCNMVLENVKEMWTEK----PKGGKGKGVNKDRFVSKMYVQTNTCLLAT 112
Query: 91 RN 92
N
Sbjct: 113 GN 114
>gi|68071819|ref|XP_677823.1| small nuclear ribonucleoprotein [Plasmodium berghei strain ANKA]
gi|56498082|emb|CAH95523.1| small nuclear ribonucleoprotein, putative [Plasmodium berghei]
Length = 101
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 51/64 (79%), Gaps = 3/64 (4%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCN++L VRE+W E+ K K KKK KDR+IS +FLRGDSVI++L
Sbjct: 41 KLLGRVKAFDRHCNLLLTEVREIWVEVIKDKKKKKKIN---KDRYISILFLRGDSVILIL 97
Query: 91 RNPK 94
RNPK
Sbjct: 98 RNPK 101
>gi|70942126|ref|XP_741266.1| small nuclear ribonucleoprotein [Plasmodium chabaudi chabaudi]
gi|70945863|ref|XP_742706.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56519539|emb|CAH84536.1| small nuclear ribonucleoprotein, putative [Plasmodium chabaudi
chabaudi]
gi|56521836|emb|CAH78030.1| hypothetical protein PC000715.02.0 [Plasmodium chabaudi chabaudi]
Length = 101
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 49/64 (76%), Gaps = 3/64 (4%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCN++L VRE+W E+ K K KKK R+IS +FLRGDSVI++L
Sbjct: 41 KLLGRVKAFDRHCNLLLTEVREIWVEVVKDKKKKKKINKD---RYISILFLRGDSVILIL 97
Query: 91 RNPK 94
RNPK
Sbjct: 98 RNPK 101
>gi|82915132|ref|XP_728974.1| small nuclear ribonucleoprotein [Plasmodium yoelii yoelii 17XNL]
gi|23485713|gb|EAA20539.1| small nuclear ribonucleoprotein. [Plasmodium yoelii yoelii]
Length = 101
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 49/64 (76%), Gaps = 3/64 (4%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLGRV+AFDRHCN++L VRE+W E+ K K KKK R+IS +FLRGDSVI++L
Sbjct: 41 KLLGRVKAFDRHCNLLLTEVREIWVEIIKDKKKKKKINKD---RYISILFLRGDSVILIL 97
Query: 91 RNPK 94
RNPK
Sbjct: 98 RNPK 101
>gi|124801422|ref|XP_001349689.1| small nuclear ribonucleoprotein, putative [Plasmodium falciparum
3D7]
gi|3845296|gb|AAC71962.1| small nuclear ribonucleoprotein, putative [Plasmodium falciparum
3D7]
Length = 101
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 52/64 (81%), Gaps = 3/64 (4%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
++LGRV+AFDRHCN++L VRE+W E+ K KKK +NKDR+IS +FLRGDSVI++L
Sbjct: 41 KILGRVKAFDRHCNLLLTGVREIWVEVVKD---KKKKKKINKDRYISILFLRGDSVILIL 97
Query: 91 RNPK 94
RNPK
Sbjct: 98 RNPK 101
>gi|156093647|ref|XP_001612862.1| small nuclear ribonucleoprotein Sm D2 [Plasmodium vivax Sal-1]
gi|221052951|ref|XP_002257850.1| small nuclear ribonucleoprotein [Plasmodium knowlesi strain H]
gi|148801736|gb|EDL43135.1| small nuclear ribonucleoprotein Sm D2, putative [Plasmodium vivax]
gi|193807682|emb|CAQ38386.1| small nuclear ribonucleoprotein, putative [Plasmodium knowlesi
strain H]
gi|390371035|dbj|GAB64916.1| small nuclear ribonucleoprotein Sm D2 [Plasmodium cynomolgi strain
B]
Length = 101
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 48/64 (75%), Gaps = 3/64 (4%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL RV+AFDRHCN++L VRE+W E+ K K KKK R+IS +FLRGDSVI++L
Sbjct: 41 KLLARVKAFDRHCNLLLTEVREIWVEVVKDKKKKKKINKD---RYISILFLRGDSVILIL 97
Query: 91 RNPK 94
RNPK
Sbjct: 98 RNPK 101
>gi|449292825|gb|EMC90804.1| Small nuclear ribonucleoprotein Sm D2 [Columba livia]
Length = 54
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/49 (85%), Positives = 48/49 (97%)
Query: 45 MVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNP 93
MVLENV+EMWTE+PK+GKGKKK+ PVNKDR+ISKMFLRGDSVI+VLRNP
Sbjct: 1 MVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNP 49
>gi|302652082|ref|XP_003017901.1| small nuclear ribonucleoprotein SmD2, putative [Trichophyton
verrucosum HKI 0517]
gi|291181486|gb|EFE37256.1| small nuclear ribonucleoprotein SmD2, putative [Trichophyton
verrucosum HKI 0517]
Length = 111
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 36/49 (73%), Gaps = 4/49 (8%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKM 79
+LL RV+AFDRHCNMVLENV+EMWTE K VNKDRFISKM
Sbjct: 67 KLLARVKAFDRHCNMVLENVKEMWTEK----PKGGKGKGVNKDRFISKM 111
>gi|320037519|gb|EFW19456.1| small nuclear ribonucleoprotein Sm D2 [Coccidioides posadasii str.
Silveira]
Length = 100
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 35/48 (72%), Gaps = 4/48 (8%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISK 78
+LL RV+AFDRHCNMVLENV+EMWTE K VNKDRF+SK
Sbjct: 57 KLLARVKAFDRHCNMVLENVKEMWTEK----PKGGKGKGVNKDRFVSK 100
>gi|413942323|gb|AFW74972.1| hypothetical protein ZEAMMB73_294095 [Zea mays]
Length = 116
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 34/41 (82%), Gaps = 2/41 (4%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKK--KALP 69
+LLGRVRAFDRHCNMVLENVREMWTE+ +T + K +LP
Sbjct: 41 KLLGRVRAFDRHCNMVLENVREMWTEVGRTERSLKLLSSLP 81
>gi|165934067|gb|ABY74561.1| small nuclear ribonucleoprotein D2 (predicted) [Callithrix
jacchus]
Length = 53
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/49 (77%), Positives = 45/49 (91%), Gaps = 1/49 (2%)
Query: 45 MVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNP 93
MVLENV+EMWTE+PK+GK KK+ PV+KDR+ISKMF RGDSVI+VLRNP
Sbjct: 1 MVLENVKEMWTEVPKSGK-GKKSKPVSKDRYISKMFRRGDSVIVVLRNP 48
>gi|449017972|dbj|BAM81374.1| similar to Sm protein D2 [Cyanidioschyzon merolae strain 10D]
Length = 332
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 42/61 (68%), Gaps = 6/61 (9%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+L G +RA+D+H N+++E+VRE+W E + P ++RFIS++F+RGD VI ++
Sbjct: 265 KLYGTLRAYDKHFNLIMEHVREIWQE------SQPDRPPDLRERFISRLFVRGDGVIFIV 318
Query: 91 R 91
R
Sbjct: 319 R 319
>gi|161899517|ref|XP_001712984.1| mRNA splicing factor [Bigelowiella natans]
gi|75756479|gb|ABA27372.1| mRNA splicing factor [Bigelowiella natans]
Length = 101
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+ G +R FD+HCN++LE+V E+W E + KK + + K++FI K+F RGD+VI++
Sbjct: 40 KFYGFIRGFDKHCNLMLEDVTEIWKEETTDARSLKKKVVI-KEKFIPKLFFRGDAVILI 97
>gi|238006980|gb|ACR34525.1| unknown [Zea mays]
gi|414586341|tpg|DAA36912.1| TPA: hypothetical protein ZEAMMB73_879106 [Zea mays]
Length = 85
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 32/41 (78%), Gaps = 5/41 (12%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTE-----LPKTGKGKKK 66
+LLGRVRAFDRHCNMVLENVREMWTE P+ + K++
Sbjct: 42 KLLGRVRAFDRHCNMVLENVREMWTEDFLSRSPRLARAKRR 82
>gi|403287226|ref|XP_003934853.1| PREDICTED: uncharacterized protein LOC101043343 [Saimiri
boliviensis boliviensis]
Length = 269
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/63 (66%), Positives = 53/63 (84%), Gaps = 1/63 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LL V+A DRHCNMVLEN EM TE+PK+GKGKKK+ PV+KDR+I+KMFL G+ I+VL
Sbjct: 51 KLLDPVKASDRHCNMVLEN-EEMRTEVPKSGKGKKKSKPVDKDRYIAKMFLCGNWAIVVL 109
Query: 91 RNP 93
R+P
Sbjct: 110 RHP 112
>gi|330038624|ref|XP_003239651.1| small nuclear ribonucleoprotein SM D2 [Cryptomonas paramecium]
gi|327206575|gb|AEA38753.1| small nuclear ribonucleoprotein SM D2 [Cryptomonas paramecium]
Length = 85
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 41/60 (68%), Gaps = 7/60 (11%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+L+G +RAFD+H N++LENVRE+WT + +R+I+KM LRGDS++++L
Sbjct: 31 KLVGYIRAFDKHVNLILENVRELWTTCVEKN-------IFYHERYIAKMILRGDSIVLLL 83
>gi|303314445|ref|XP_003067231.1| conserved hypothetical protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240106899|gb|EER25086.1| conserved hypothetical protein [Coccidioides posadasii C735 delta
SOWgp]
Length = 44
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 36/46 (78%), Gaps = 4/46 (8%)
Query: 45 MVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
MVLENV+EMWTE PK K VNKDRF+SKMFLRGDSVI+VL
Sbjct: 1 MVLENVKEMWTEKPKG----GKGKGVNKDRFVSKMFLRGDSVILVL 42
>gi|399949825|gb|AFP65482.1| small nuclear ribonucleoprotein SM D2 [Chroomonas mesostigmatica
CCMP1168]
Length = 85
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 6/61 (9%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLG +RAFDRH N++++N +E+WT K K K K ++F K+ LRGDS+I+++
Sbjct: 30 KLLGYIRAFDRHMNLIIDNGKEIWTS--KCSKKKVKF----HEKFFPKLVLRGDSIILIV 83
Query: 91 R 91
R
Sbjct: 84 R 84
>gi|164657289|ref|XP_001729771.1| hypothetical protein MGL_3315 [Malassezia globosa CBS 7966]
gi|159103664|gb|EDP42557.1| hypothetical protein MGL_3315 [Malassezia globosa CBS 7966]
Length = 104
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/28 (78%), Positives = 26/28 (92%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELP 58
+LL RV+AFDRH NMVLENV+EMWTE+P
Sbjct: 52 KLLARVKAFDRHSNMVLENVKEMWTEVP 79
>gi|224137176|ref|XP_002327056.1| predicted protein [Populus trichocarpa]
gi|222835371|gb|EEE73806.1| predicted protein [Populus trichocarpa]
Length = 127
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 33/38 (86%)
Query: 57 LPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 94
+ KTGKG++KA +N++RFISK+FLRGDSVI++L N +
Sbjct: 78 VEKTGKGEEKARTINRERFISKIFLRGDSVIVILMNQR 115
>gi|123414193|ref|XP_001304446.1| Sm protein [Trichomonas vaginalis G3]
gi|121885898|gb|EAX91516.1| Sm protein [Trichomonas vaginalis G3]
Length = 111
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 4/64 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+L G ++A DRH NM+LE+V E+ T P G+ A P+ R I+++FLRGD+VI +
Sbjct: 46 KLYGYIKAVDRHWNMILEHVIEI-TPTP-AKPGQPAAAPIQ--RRINRLFLRGDNVICIY 101
Query: 91 RNPK 94
NPK
Sbjct: 102 PNPK 105
>gi|449329925|gb|AGE96193.1| small nuclear ribonucleoprotein d2 [Encephalitozoon cuniculi]
Length = 135
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
++LGRV A+DRH N+++E+ +E+ T K KG+KK R + K+F+RGD+VI+V
Sbjct: 44 KVLGRVVAYDRHYNLLMEDAKELGTTRGKN-KGRKKRQGCEFSRKLGKVFIRGDTVILV 101
>gi|19074769|ref|NP_586275.1| SMALL NUCLEAR RIBONUCLEOPROTEIN D2 [Encephalitozoon cuniculi GB-M1]
gi|19069411|emb|CAD25879.1| SMALL NUCLEAR RIBONUCLEOPROTEIN D2 [Encephalitozoon cuniculi GB-M1]
Length = 135
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
++LGRV A+DRH N+++E+ +E+ T K KG+KK R + K+F+RGD+VI+V
Sbjct: 44 KVLGRVVAYDRHYNLLMEDAKELGTTRGKN-KGRKKRQGCEFSRKLGKVFIRGDTVILV 101
>gi|403272537|ref|XP_003928113.1| PREDICTED: LOW QUALITY PROTEIN: probable small nuclear
ribonucleoprotein Sm D2-like [Saimiri boliviensis
boliviensis]
Length = 221
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+LLG V AFD HCN VLENV+EM TE+ KK+ PVNK R+I MFL D
Sbjct: 51 KLLGGVXAFDGHCNAVLENVKEMGTEV-PKSGKGKKSKPVNKARYIPGMFLLRDPSSCPS 109
Query: 91 RN 92
+N
Sbjct: 110 QN 111
>gi|84995764|ref|XP_952604.1| u6 snrna-associated sm-like protein Lsm3 [Theileria annulata
strain Ankara]
gi|65302765|emb|CAI74872.1| u6 snrna-associated sm-like protein Lsm3, putative [Theileria
annulata]
Length = 94
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L+GR+ AFD HCNMVL +V E T + K + V K R +F+RGDS++++
Sbjct: 31 ELVGRLHAFDEHCNMVLSDVTETITTVDADDNSKNETTKVTK-RDNGTIFVRGDSLVLL 88
>gi|442746065|gb|JAA65192.1| Putative small nuclear ribonucleoprotein d2 polypeptide, partial
[Ixodes ricinus]
Length = 131
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 4/56 (7%)
Query: 42 HCNMVLENVREMWTELP-KTGKGKKKALPV-NKDR--FISKMFLRGDSVIIVLRNP 93
+CNM +ENV+EMWTE + + +++ PV KDR +MFLRGDSVI+VL P
Sbjct: 55 YCNMFVENVKEMWTETSNERERYREETNPVRTKDRPTIYQRMFLRGDSVILVLNEP 110
>gi|399216324|emb|CCF73012.1| unnamed protein product [Babesia microti strain RI]
Length = 93
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 9/67 (13%)
Query: 31 QLLGRVRAFDRHCNMVLENVRE---MWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVI 87
++ G++ A+D HCN++LE+ E + TE P+TG N D +F+RGDS+I
Sbjct: 31 EITGKLHAYDEHCNIILEDAVETITVITEDPETGTESTSVNTKNSDV----LFVRGDSII 86
Query: 88 IVLRNPK 94
+V +PK
Sbjct: 87 LV--SPK 91
>gi|443924030|gb|ELU43109.1| hypothetical protein AG1IA_02870 [Rhizoctonia solani AG-1 IA]
Length = 50
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 26/36 (72%), Gaps = 4/36 (11%)
Query: 53 MWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVII 88
MWTE K GK VNKDRFISKMFLRGDSVI+
Sbjct: 1 MWTETQKGKNGK----TVNKDRFISKMFLRGDSVIL 32
>gi|149235353|ref|XP_001523555.1| hypothetical protein LELG_05401 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452964|gb|EDK47220.1| hypothetical protein LELG_05401 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 90
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 16/91 (17%)
Query: 6 IRFSFRNSQTTLMLFCFWALEFIVL------QLLGRVRAFDRHCNMVLENVRE-MWTELP 58
++ + Q L L F +++V+ +L G+++ +D HCNMVL + E ++ + P
Sbjct: 4 VKTEHQQLQEPLDLIRFQLDDYVVVKLRGARELYGKLQGYDSHCNMVLSDATETIYGDSP 63
Query: 59 KTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
T KKK +F+RGDSVI++
Sbjct: 64 DTKPVKKKT---------DMVFVRGDSVILI 85
>gi|401827885|ref|XP_003888235.1| Sm-like ribonucleoprotein subunit D2 [Encephalitozoon hellem ATCC
50504]
gi|392999435|gb|AFM99254.1| Sm-like ribonucleoprotein subunit D2 [Encephalitozoon hellem ATCC
50504]
Length = 128
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+++G+V A+DRH N+++E+ +E+ T K +GKKK R + +F+RGD+VI+V
Sbjct: 44 KVVGKVIAYDRHYNLLMEDAKELGTMRGKN-RGKKKRQGCGFSRRLGNVFIRGDTVILV 101
>gi|50302335|ref|XP_451102.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640233|emb|CAH02690.1| KLLA0A02299p [Kluyveromyces lactis]
Length = 93
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 8 FSFRNSQTTLMLFCFWALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKA 67
+++ + QTT+ FW E + ++ G++R FD N+V+++ E+ + PK+GK
Sbjct: 18 YNYLHHQTTV---TFWLYEQVQTRIRGKIRGFDEFMNVVIDDAFEIAVD-PKSGKESD-- 71
Query: 68 LPVNKDRFISKMFLRGDSVIIVLRN 92
+K F+ ++ L+GD++ +V+ N
Sbjct: 72 ---DKAVFLGRIMLKGDNITLVVAN 93
>gi|429327225|gb|AFZ78985.1| U6 small nuclear ribonucleoprotein, putative [Babesia equi]
Length = 93
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 7/67 (10%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTEL---PKTGKGKKKALPVNKDRFISKMFLRGDSVI 87
+++GR+ A+D HCNM+L + +E T P T + KK++ R +F+RGDS+I
Sbjct: 31 EIVGRLHAYDEHCNMILSDAKETITTAEIEPTTNEEIKKSVQ----RDSGTVFIRGDSLI 86
Query: 88 IVLRNPK 94
++ + +
Sbjct: 87 LLSHHEQ 93
>gi|255727663|ref|XP_002548757.1| hypothetical protein CTRG_03054 [Candida tropicalis MYA-3404]
gi|240133073|gb|EER32629.1| hypothetical protein CTRG_03054 [Candida tropicalis MYA-3404]
Length = 92
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 11/90 (12%)
Query: 6 IRFSFRNSQTTLMLFCFWALEFIVL------QLLGRVRAFDRHCNMVLENVREMWTELPK 59
I+ R Q L L F E++++ +L G+++ +D HCNMVL + +E L +
Sbjct: 4 IQPEQREDQQPLDLIRFQLDEYVLVKLRGARELKGKLQGYDSHCNMVLSDAQEFIYSLDE 63
Query: 60 TGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
K K P+ K +F+RGDSVI++
Sbjct: 64 NSKIKD---PIVKK--TDMVFVRGDSVILI 88
>gi|323456789|gb|EGB12655.1| hypothetical protein AURANDRAFT_60633 [Aureococcus anophagefferens]
Length = 779
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 5/61 (8%)
Query: 33 LGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRN 92
+G ++AFDRH N+VL + E T +P + +A PV RF+ ++ +RGD+V++V R
Sbjct: 184 VGLLKAFDRHMNLVLVDAAE--TTVPPM-RNPDRARPVT--RFLKQVLIRGDNVVLVCRA 238
Query: 93 P 93
P
Sbjct: 239 P 239
>gi|50546547|ref|XP_500743.1| YALI0B11022p [Yarrowia lipolytica]
gi|49646609|emb|CAG82989.1| YALI0B11022p [Yarrowia lipolytica CLIB122]
Length = 94
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 13/67 (19%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTEL----PKTGKGKKKALPVNKDRFISKMFLRGDSV 86
+L G + A+D HC+MVL NV E E PK KKK+ +F+RGDSV
Sbjct: 33 ELYGLLHAYDIHCSMVLGNVEETVFEYVEGSPKLEARKKKS---------EMLFVRGDSV 83
Query: 87 IIVLRNP 93
I+V NP
Sbjct: 84 ILVTSNP 90
>gi|403221689|dbj|BAM39821.1| U6 snRNA-associated sm-like protein Lsm3 [Theileria orientalis
strain Shintoku]
Length = 93
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISK-MFLRGDSVIIV 89
+L+GR+ AFD HCNMVL V E T + G+ P R S+ +F+RGDS+I++
Sbjct: 31 ELIGRLHAFDDHCNMVLSEVTETITTV--DGEPNTNQQPNKVTRRDSRTVFVRGDSLILL 88
>gi|341881025|gb|EGT36960.1| hypothetical protein CAEBREN_23318 [Caenorhabditis brenneri]
Length = 102
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+RAFD+H NMVL +V E T + + + + R + +F+RGDSVI+V
Sbjct: 38 ELRGRLRAFDQHLNMVLSDVEETIT-TREVDEDTFEEIYRQSKRVVPMLFVRGDSVILV 95
>gi|156400726|ref|XP_001638943.1| predicted protein [Nematostella vectensis]
gi|156226068|gb|EDO46880.1| predicted protein [Nematostella vectensis]
Length = 102
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L +V E T + + ++ NK R + MF+RGD VI+V
Sbjct: 37 ELRGRLHAYDQHLNMILSDVEETITTVEIDEETFEELFRTNK-RTVPMMFIRGDGVILV 94
>gi|19112539|ref|NP_595747.1| U6 snRNP-associated protein Lsm3 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|10720084|sp|Q9Y7M4.2|LSM3_SCHPO RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm3
gi|6942158|emb|CAB42366.2| U6 snRNP-associated protein Lsm3 (predicted) [Schizosaccharomyces
pombe]
Length = 93
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D H NMVL + E+ T K KAL + + +F+RGDSVI++
Sbjct: 31 ELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTIRKHY-EMLFVRGDSVILI 88
>gi|426334164|ref|XP_004028631.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like
[Gorilla gorilla gorilla]
Length = 55
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 3/46 (6%)
Query: 45 MVLENVREMWTELPKTGKGKKKAL---PVNKDRFISKMFLRGDSVI 87
MVL+NV+EM TE+PK KG K P NKDRFISK+FL DSVI
Sbjct: 1 MVLKNVKEMCTEVPKGDKGGKGKKKSKPANKDRFISKLFLSRDSVI 46
>gi|17543872|ref|NP_502579.1| Protein LSM-3 [Caenorhabditis elegans]
gi|14530659|emb|CAB60606.2| Protein LSM-3 [Caenorhabditis elegans]
Length = 102
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+RAFD+H NMVL V E T + + + + R + +F+RGDSVI+V
Sbjct: 38 ELRGRLRAFDQHLNMVLSEVEETIT-TREVDEDTFEEIYKQTKRVVPMLFVRGDSVILV 95
>gi|268552449|ref|XP_002634207.1| C. briggsae CBR-LSM-3 protein [Caenorhabditis briggsae]
Length = 102
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+RAFD+H NMVL V E T + + + + R + +F+RGDSVI+V
Sbjct: 38 ELRGRLRAFDQHLNMVLSEVEETIT-TREVDEDTFEEIYRQSKRVVPMLFVRGDSVILV 95
>gi|296005050|ref|XP_002808862.1| lsm3 homologue, putative [Plasmodium falciparum 3D7]
gi|225632259|emb|CAX64140.1| lsm3 homologue, putative [Plasmodium falciparum 3D7]
Length = 91
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 17/66 (25%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKM-------FLRG 83
+L+G++ A+D H NM+L NVRE + K ++ N + + KM F+RG
Sbjct: 31 ELIGKLDAYDNHLNMILSNVRETY----------KYSVKENDEETVKKMERNLDMVFVRG 80
Query: 84 DSVIIV 89
DS+I+V
Sbjct: 81 DSIILV 86
>gi|71051464|gb|AAH14600.1| LOC645339 protein [Homo sapiens]
Length = 55
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 3/46 (6%)
Query: 45 MVLENVREMWTELPKTGKGKKK---ALPVNKDRFISKMFLRGDSVI 87
MVLENV+EM TE+PK G G K + P NKD FISK+FL DSVI
Sbjct: 1 MVLENVKEMCTEVPKGGNGGKGKKKSKPANKDHFISKLFLCRDSVI 46
>gi|384252623|gb|EIE26099.1| Sm-like ribonucleo protein [Coccomyxa subellipsoidea C-169]
Length = 95
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L V E T + + ++ + NK R + +F+RGD VI+V
Sbjct: 32 ELRGRLHAYDQHLNMILGEVEETITSIEIDDETYEEIIKTNK-RAVPFLFVRGDGVILV 89
>gi|162606564|ref|XP_001713312.1| small nuclear ribonucleoprotein SM D2 [Guillardia theta]
gi|12580778|emb|CAC27096.1| small nuclear ribonucleoprotein SM D2 [Guillardia theta]
Length = 82
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 41/66 (62%), Gaps = 17/66 (25%)
Query: 31 QLLGRVRAFDRHCNMVLENVREM------WTELPKTGKGKKKALPVNKDRFISKMFLRGD 84
+++G++ +D+H N++LENV E+ ++EL K K +FI K+FLRGD
Sbjct: 26 RMIGKIINYDKHLNLLLENVNEIKFVGENFSELIKI-----------KSKFIPKVFLRGD 74
Query: 85 SVIIVL 90
+++++L
Sbjct: 75 NIVLIL 80
>gi|308492161|ref|XP_003108271.1| CRE-LSM-3 protein [Caenorhabditis remanei]
gi|308249119|gb|EFO93071.1| CRE-LSM-3 protein [Caenorhabditis remanei]
Length = 102
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
++ GR+RAFD+H NMVL V E T + + + + R + +F+RGDSVI+V
Sbjct: 38 EIRGRLRAFDQHLNMVLSEVEETIT-TREVDEDTFEEIYRQTKRVVPMLFVRGDSVILV 95
>gi|290989375|ref|XP_002677313.1| predicted protein [Naegleria gruberi]
gi|284090920|gb|EFC44569.1| predicted protein [Naegleria gruberi]
Length = 95
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+L G + A+D+H NMVL NV E E+ + ++ + + R I +FLRGD VI+V+
Sbjct: 30 ELRGTLHAYDQHLNMVLGNVEETIHEIDIDKETNEQQMK-STTRKIGMLFLRGDGVILVV 88
Query: 91 RN 92
+
Sbjct: 89 NS 90
>gi|67484430|ref|XP_657435.1| U6 snRNA-associated Sm-like protein LSm3 [Entamoeba histolytica
HM-1:IMSS]
gi|56474688|gb|EAL52049.1| U6 snRNA-associated Sm-like protein LSm3, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449702203|gb|EMD42886.1| U6 snrnaassociated Sm family LSm3 protein [Entamoeba histolytica
KU27]
Length = 78
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 15/59 (25%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++RAFD+H N++L NV EM+ E K + PV +++RGD VI++
Sbjct: 30 KLKGKLRAFDQHLNIILTNVSEMYQE-------KTRTFPV--------LYIRGDLVILI 73
>gi|326498435|dbj|BAJ98645.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326513560|dbj|BAJ87799.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 101
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ A+D+H NM+L +V E+ T + + ++ + +K R I +F+RGD VI+V
Sbjct: 37 ELRGKLHAYDQHLNMILGDVEEIVTSIEIDDETYEEIVRTSK-RTIPYLFVRGDGVILV 94
>gi|396082353|gb|AFN83963.1| small nuclear ribonucleoprotein D2 [Encephalitozoon romaleae
SJ-2008]
Length = 128
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+++G+V A+DRH N+++ + +E+ + KGKKK + R + +F+RGD+VI+V
Sbjct: 44 KVMGKVIAYDRHYNLLMGDAKEIGN-MRGRNKGKKKRQGCDFSRRLGNVFIRGDTVILV 101
>gi|326483593|gb|EGE07603.1| hypothetical protein TEQG_06517 [Trichophyton equinum CBS 127.97]
Length = 100
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D HCN+VL +V E + + G++ + K + +F+RGDSV+++
Sbjct: 37 ELKGRLHAYDSHCNIVLGDVEETIYIVEENEAGEETIKTIKKQEEM--LFVRGDSVVLI 93
>gi|294886769|ref|XP_002771844.1| small nuclear ribonucleoprotein, putative [Perkinsus marinus ATCC
50983]
gi|239875644|gb|EER03660.1| small nuclear ribonucleoprotein, putative [Perkinsus marinus ATCC
50983]
gi|302372346|gb|ADL28384.1| putative Sm-like RNA-binding protein [Perkinsus marinus ATCC
50439]
Length = 92
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 6/62 (9%)
Query: 32 LLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLR 91
L GR+ A+D H NMVL V E+ P +G K P+ +D + +F+RGD +I+V
Sbjct: 32 LRGRLVAYDSHLNMVLSEVEEVIE--PPVKEGVKHRRPIRRD--LDTIFVRGDGIILV-- 85
Query: 92 NP 93
NP
Sbjct: 86 NP 87
>gi|407927498|gb|EKG20390.1| hypothetical protein MPH_02316 [Macrophomina phaseolina MS6]
Length = 99
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 12 NSQTTLMLFCFWALEFIVL----QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKA 67
N L+ C + F+ L +L GR+ A+D HCN+VL +V E + + ++
Sbjct: 14 NEPLDLVRLCLDEVVFVKLRGDRELKGRLHAYDSHCNLVLGDVEETIYVVEEDANEEEVV 73
Query: 68 LPVNKDRFISKMFLRGDSVIIV 89
V K + +F+RGDSV+++
Sbjct: 74 RTVKKQSEM--LFVRGDSVVLI 93
>gi|148908265|gb|ABR17247.1| unknown [Picea sitchensis]
Length = 97
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ A+D+H NM+L +V E+ T + + ++ + +K R + +F+RGD VI+V
Sbjct: 33 ELRGKLHAYDQHLNMILGDVEEVITTVEIDDETYEEIVKTSK-RVVPYLFVRGDGVILV 90
>gi|315042007|ref|XP_003170380.1| hypothetical protein MGYG_07624 [Arthroderma gypseum CBS 118893]
gi|327298847|ref|XP_003234117.1| U6 small nuclear ribonucleoprotein [Trichophyton rubrum CBS
118892]
gi|311345414|gb|EFR04617.1| hypothetical protein MGYG_07624 [Arthroderma gypseum CBS 118893]
gi|326464295|gb|EGD89748.1| U6 small nuclear ribonucleoprotein [Trichophyton rubrum CBS
118892]
Length = 100
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D HCN+VL +V E + + G++ + K + +F+RGDSV+++
Sbjct: 37 ELKGRLHAYDSHCNIVLGDVEETIYIVEEDEAGEETIKTIKKQEEM--LFVRGDSVVLI 93
>gi|302755206|ref|XP_002961027.1| hypothetical protein SELMODRAFT_8958 [Selaginella moellendorffii]
gi|302767128|ref|XP_002966984.1| hypothetical protein SELMODRAFT_8957 [Selaginella moellendorffii]
gi|300164975|gb|EFJ31583.1| hypothetical protein SELMODRAFT_8957 [Selaginella moellendorffii]
gi|300171966|gb|EFJ38566.1| hypothetical protein SELMODRAFT_8958 [Selaginella moellendorffii]
Length = 94
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKD-RFISKMFLRGDSVI 87
QL+G+ AFDRH N VL + E PK G GK++ +D R + + LRG+ V+
Sbjct: 26 QLVGKFMAFDRHMNFVLGDTEEFRRLPPKKGAGKQQGGEEREDRRTLGLILLRGEEVV 83
>gi|390981129|pdb|4EMG|A Chain A, Crystal Structure Of Splsm3
gi|390981130|pdb|4EMG|B Chain B, Crystal Structure Of Splsm3
gi|390981131|pdb|4EMG|C Chain C, Crystal Structure Of Splsm3
gi|390981132|pdb|4EMG|D Chain D, Crystal Structure Of Splsm3
gi|390981133|pdb|4EMG|E Chain E, Crystal Structure Of Splsm3
gi|390981134|pdb|4EMG|F Chain F, Crystal Structure Of Splsm3
gi|390981135|pdb|4EMG|G Chain G, Crystal Structure Of Splsm3
gi|390981136|pdb|4EMG|H Chain H, Crystal Structure Of Splsm3
gi|390981137|pdb|4EMG|I Chain I, Crystal Structure Of Splsm3
gi|390981138|pdb|4EMG|J Chain J, Crystal Structure Of Splsm3
gi|390981139|pdb|4EMG|K Chain K, Crystal Structure Of Splsm3
gi|390981140|pdb|4EMG|L Chain L, Crystal Structure Of Splsm3
gi|390981141|pdb|4EMG|M Chain M, Crystal Structure Of Splsm3
gi|390981142|pdb|4EMG|N Chain N, Crystal Structure Of Splsm3
Length = 93
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D H N VL + E+ T K KAL + + +F+RGDSVI++
Sbjct: 31 ELNGRLHAYDEHLNXVLGDAEEIVTIFDDEETDKDKALKTIRKHY-EXLFVRGDSVILI 88
>gi|367008820|ref|XP_003678911.1| hypothetical protein TDEL_0A03680 [Torulaspora delbrueckii]
gi|359746568|emb|CCE89700.1| hypothetical protein TDEL_0A03680 [Torulaspora delbrueckii]
Length = 93
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 8 FSFRNSQTTLMLFCFWALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKA 67
F + QT L FW E + +++ G++ FD N+V+++ E+ + PKTG
Sbjct: 16 FDYLQQQT---LVTFWLFEQVGIRIRGKISGFDEFMNVVIDDALEIPVD-PKTG-----V 66
Query: 68 LPVNKDRFISKMFLRGDSVIIV 89
+ K R + K+ L+GD++ ++
Sbjct: 67 EDIEKGRKLGKILLKGDNITLI 88
>gi|254565075|ref|XP_002489648.1| Lsm (Like Sm) protein [Komagataella pastoris GS115]
gi|238029444|emb|CAY67367.1| Lsm (Like Sm) protein [Komagataella pastoris GS115]
Length = 84
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 38/59 (64%), Gaps = 6/59 (10%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+++G++ A+D HCN+VL + E + + + + K + KDR + ++LRGDSVI+V
Sbjct: 27 EIVGKLHAYDNHCNLVLGDAVETISTVDENNELKTQT----KDRPM--VYLRGDSVILV 79
>gi|401399263|ref|XP_003880515.1| deha2e04510p, related [Neospora caninum Liverpool]
gi|325114925|emb|CBZ50482.1| deha2e04510p, related [Neospora caninum Liverpool]
Length = 96
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 7/62 (11%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTEL---PKTGKGKKKALPVNKDRFISKMFLRGDSVI 87
+++G++ A+D H NMVL +V E+ T + P TG + K R + +FLRGD++I
Sbjct: 31 EVMGKLHAYDMHLNMVLGDVEEVATTVTTDPLTGDEQTK----KTTRRLPLIFLRGDAII 86
Query: 88 IV 89
+V
Sbjct: 87 LV 88
>gi|328350067|emb|CCA36467.1| U6 snRNA-associated Sm-like protein LSm6 [Komagataella pastoris CBS
7435]
Length = 199
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 38/59 (64%), Gaps = 6/59 (10%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+++G++ A+D HCN+VL + E + + + + K + KDR + ++LRGDSVI+V
Sbjct: 142 EIVGKLHAYDNHCNLVLGDAVETISTVDENNELKTQT----KDRPM--VYLRGDSVILV 194
>gi|332373734|gb|AEE62008.1| unknown [Dendroctonus ponderosae]
Length = 101
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L +V E T + + ++ K R I +F+RGD VI+V
Sbjct: 37 ELKGRLHAYDQHMNMILSDVEETITTVEIDEETYEEVYKSTK-RNIPMLFVRGDGVILV 94
>gi|442761385|gb|JAA72851.1| Putative u6 small nuclear rna associated, partial [Ixodes ricinus]
Length = 148
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L +V E T + + ++ K R I +F+RGD VI+V
Sbjct: 83 ELRGRLHAYDQHLNMILGDVEETVTSVEIDEETYEEVYKSTK-RSIPMLFVRGDGVILV 140
>gi|302855073|ref|XP_002959037.1| hypothetical protein VOLCADRAFT_108433 [Volvox carteri f.
nagariensis]
gi|300255603|gb|EFJ39898.1| hypothetical protein VOLCADRAFT_108433 [Volvox carteri f.
nagariensis]
Length = 97
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L V E T + + ++ + K R I +F+RGD VI+V
Sbjct: 34 ELRGRLHAYDQHLNMILGEVEETLTTVEIDDETYEEIIKTQK-RVIPFLFVRGDGVILV 91
>gi|170029969|ref|XP_001842863.1| snrnp sm protein [Culex quinquefasciatus]
gi|167865323|gb|EDS28706.1| snrnp sm protein [Culex quinquefasciatus]
Length = 101
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ AFD+H NMVL + E T + + ++ +K R I +F+RGD VI+V
Sbjct: 36 ELRGRLHAFDQHLNMVLGDAEETVTTVEIDEETYEEVYKTSK-RTIPMLFVRGDGVILV 93
>gi|195144968|ref|XP_002013468.1| GL23390 [Drosophila persimilis]
gi|198477437|ref|XP_002136616.1| GA29226 [Drosophila pseudoobscura pseudoobscura]
gi|194102411|gb|EDW24454.1| GL23390 [Drosophila persimilis]
gi|198142908|gb|EDY71620.1| GA29226 [Drosophila pseudoobscura pseudoobscura]
Length = 103
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ AFD+H NMVL + E T + + ++ K R I +F+RGD VI+V
Sbjct: 39 ELRGRLHAFDQHLNMVLGDAEETVTTVEIDEETYEEVYKTTK-RTIPMLFVRGDGVILV 96
>gi|390178194|ref|XP_002137483.2| GA30187 [Drosophila pseudoobscura pseudoobscura]
gi|388859360|gb|EDY68041.2| GA30187 [Drosophila pseudoobscura pseudoobscura]
Length = 100
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ AFD+H NMVL + E T + + ++ K R I +F+RGD VI+V
Sbjct: 36 ELRGRLHAFDQHLNMVLGDAEETVTTVEIDEETYEEVYKTTK-RTIPMLFVRGDGVILV 93
>gi|347966098|ref|XP_003435864.1| AGAP013519-PA [Anopheles gambiae str. PEST]
gi|333470212|gb|EGK97549.1| AGAP013519-PA [Anopheles gambiae str. PEST]
Length = 101
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ AFD+H NMVL + E T + + ++ K R I +F+RGD VI+V
Sbjct: 36 ELRGRLHAFDQHLNMVLGDAEETVTTVEIDEETYEEVYKTTK-RTIPMLFVRGDGVILV 93
>gi|289742031|gb|ADD19763.1| small nuclear ribonucleoprotein LsM3 [Glossina morsitans
morsitans]
Length = 102
Score = 42.0 bits (97), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ AFD+H NMVL + E T + + ++ K R I +F+RGD VI+V
Sbjct: 38 ELRGRLHAFDQHLNMVLGDAEETVTTVEIDEETYEEVYKTTK-RTIPMLFVRGDGVILV 95
>gi|237844935|ref|XP_002371765.1| LSM domain-containing protein [Toxoplasma gondii ME49]
gi|211969429|gb|EEB04625.1| LSM domain-containing protein [Toxoplasma gondii ME49]
gi|221480823|gb|EEE19247.1| LSM domain-containing protein, putative [Toxoplasma gondii GT1]
gi|221501570|gb|EEE27343.1| LSM domain-containing protein, putative [Toxoplasma gondii VEG]
Length = 96
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 7/62 (11%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTEL---PKTGKGKKKALPVNKDRFISKMFLRGDSVI 87
+++G++ A+D H NMVL +V E+ T + P TG + K R + +FLRGD++I
Sbjct: 31 EVVGKLHAYDMHLNMVLGDVEEVATTVTSDPLTGDEQTK----KTTRRLPLIFLRGDAII 86
Query: 88 IV 89
+V
Sbjct: 87 LV 88
>gi|303391220|ref|XP_003073840.1| small nuclear ribonucleoprotein D2 [Encephalitozoon intestinalis
ATCC 50506]
gi|303302988|gb|ADM12480.1| small nuclear ribonucleoprotein D2 [Encephalitozoon intestinalis
ATCC 50506]
Length = 136
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
++ G+V A+DRH N+++ RE T + KG+KK R + +F+RGD+VI+V
Sbjct: 44 KVTGKVVAYDRHYNLLVREAREFGTARGRN-KGRKKRQGSEFSRKLGNVFIRGDTVILV 101
>gi|157123813|ref|XP_001653925.1| snrnp sm protein [Aedes aegypti]
gi|108874209|gb|EAT38434.1| AAEL009671-PA [Aedes aegypti]
Length = 101
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ AFD+H NMVL + E T + + ++ K R I +F+RGD VI+V
Sbjct: 36 ELRGRLHAFDQHLNMVLGDAEETVTTVEIDEETYEEVYKTTK-RTIPMLFVRGDGVILV 93
>gi|353234582|emb|CCA66606.1| probable LSM3-U6 snRNA-associated Sm-like protein [Piriformospora
indica DSM 11827]
Length = 94
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
QL G + A+D H NM+L +V E + +G K ++ V K R I +++RGD VI+V
Sbjct: 31 QLSGVLHAYDGHMNMILSDVEETVMIVDPVPEGVKPSIRVAK-RQIEMLYVRGDGVILV 88
>gi|256085603|ref|XP_002579006.1| snrnp sm protein [Schistosoma mansoni]
gi|353230199|emb|CCD76370.1| putative snrnp sm protein [Schistosoma mansoni]
Length = 103
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G + AFD H NM+L NV E T L + ++ K R I +F+RGD VI+V
Sbjct: 40 ELRGVLHAFDSHLNMILGNVEETVTTLEIDEETYEEVYKTTK-RTIPMLFIRGDGVILV 97
>gi|156544005|ref|XP_001607844.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like [Nasonia
vitripennis]
Length = 103
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NMVL V E T + + ++ K R I +F+RGD VI+V
Sbjct: 37 ELRGRLHAYDQHLNMVLGEVEETVTTIEIDEETYEEVYRTTK-RTIPMLFVRGDGVILV 94
>gi|389629744|ref|XP_003712525.1| hypothetical protein MGG_16841 [Magnaporthe oryzae 70-15]
gi|351644857|gb|EHA52718.1| hypothetical protein MGG_16841 [Magnaporthe oryzae 70-15]
gi|440488450|gb|ELQ68177.1| hypothetical protein OOW_P131scaffold00266g63 [Magnaporthe oryzae
P131]
Length = 95
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D HCN+VL +V E + + + K + R + +F+RGDSV+++
Sbjct: 33 ELKGRLHAYDSHCNLVLGDVEETHYIQDEDDESELKTVS----RKLEMLFVRGDSVVMI 87
>gi|159479600|ref|XP_001697878.1| Sm protein [Chlamydomonas reinhardtii]
gi|158273976|gb|EDO99761.1| Sm protein [Chlamydomonas reinhardtii]
Length = 97
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L V E T + + ++ + K R I +F+RGD +I+V
Sbjct: 34 ELRGRLHAYDQHLNMILGEVEETLTTVEIDDETYEEIIKTQK-RVIPFLFVRGDGIILV 91
>gi|297842449|ref|XP_002889106.1| hypothetical protein ARALYDRAFT_895567 [Arabidopsis lyrata subsp.
lyrata]
gi|297334947|gb|EFH65365.1| hypothetical protein ARALYDRAFT_895567 [Arabidopsis lyrata subsp.
lyrata]
Length = 98
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ AFD+H NM+L +V E T + + ++ + K R I +F+RGD VI+V
Sbjct: 33 ELRGKLHAFDQHLNMILGDVEETITTVEIDDETYEEIVRTTK-RTIEFLFVRGDGVILV 90
>gi|367012788|ref|XP_003680894.1| hypothetical protein TDEL_0D00990 [Torulaspora delbrueckii]
gi|359748554|emb|CCE91683.1| hypothetical protein TDEL_0D00990 [Torulaspora delbrueckii]
Length = 85
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+L+G ++AFD HCN+VL + E +L G+ K+ N + +F+RGDSV ++
Sbjct: 27 ELIGTLQAFDSHCNIVLSDAVETIYQLE---SGELKSTEKNSEM----IFVRGDSVTLIT 79
Query: 91 RNPK 94
P
Sbjct: 80 TPPD 83
>gi|25012398|gb|AAN71307.1| RE11655p [Drosophila melanogaster]
Length = 103
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ AFD+H NMVL + E T + + ++ K R I +F+RGD VI+V
Sbjct: 39 ELRGRLHAFDQHLNMVLGDAEETVTTVEIDEETYEEVYKTAK-RTIPMLFVRGDGVILV 96
>gi|226469802|emb|CAX70182.1| small nuclear ribonucleoprotein [Schistosoma japonicum]
gi|226469804|emb|CAX70183.1| small nuclear ribonucleoprotein [Schistosoma japonicum]
gi|226487552|emb|CAX74646.1| small nuclear ribonucleoprotein [Schistosoma japonicum]
Length = 105
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G + AFD H NM+L NV E T L + ++ K R I +F+RGD VI+V
Sbjct: 42 ELRGILHAFDSHLNMILGNVEETVTTLEIDEETYEEVYKTTK-RTIPMLFIRGDGVILV 99
>gi|241171152|ref|XP_002410602.1| snrnp sm protein, putative [Ixodes scapularis]
gi|215494871|gb|EEC04512.1| snrnp sm protein, putative [Ixodes scapularis]
Length = 102
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L +V E T + + ++ K R I +F+RGD VI+V
Sbjct: 37 ELRGRLHAYDQHLNMILGDVEETVTSVEIDEETYEEVYKSTK-RSIPMLFVRGDGVILV 94
>gi|50421915|ref|XP_459516.1| DEHA2E04510p [Debaryomyces hansenii CBS767]
gi|49655184|emb|CAG87742.1| DEHA2E04510p [Debaryomyces hansenii CBS767]
Length = 88
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 38/59 (64%), Gaps = 8/59 (13%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
++ G+++ +D HCNM+L + E ++P +G++ PV K+ +F+RGDSVI++
Sbjct: 34 EMKGKLQGYDSHCNMILSDAVEYIYDVP---EGQE---PVTKN--TDMVFVRGDSVILI 84
>gi|402086284|gb|EJT81182.1| hypothetical protein GGTG_01166 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 95
Score = 41.6 bits (96), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D HCN+VL +V E + + K + R + +F+RGDSV+++
Sbjct: 33 ELKGRLHAYDSHCNLVLGDVEETHYMQDEEDEADLKTVS----RKLEMLFVRGDSVVLI 87
>gi|15223768|ref|NP_177812.1| U6 snRNA-associated Sm-like protein LSm3 [Arabidopsis thaliana]
gi|12322228|gb|AAG51149.1|AC079283_6 Sm-like protein [Arabidopsis thaliana]
gi|21592388|gb|AAM64339.1| Sm-like protein [Arabidopsis thaliana]
gi|98961019|gb|ABF58993.1| At1g76860 [Arabidopsis thaliana]
gi|332197775|gb|AEE35896.1| U6 snRNA-associated Sm-like protein LSm3 [Arabidopsis thaliana]
Length = 98
Score = 41.6 bits (96), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ AFD+H NM+L +V E T + + ++ + K R I +F+RGD VI+V
Sbjct: 33 ELRGKLHAFDQHLNMILGDVEETITTVEIDDETYEEIVRTTK-RTIEFLFVRGDGVILV 90
>gi|281200512|gb|EFA74730.1| LSM domain-containing protein [Polysphondylium pallidum PN500]
Length = 99
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ A+D+H NM+L NV E + K + ++ + N R I +F+RGD VI++
Sbjct: 35 ELRGKLHAYDQHLNMILSNVEETIKVVEKDEETDEEIVK-NIKRNIDMLFVRGDGVILI 92
>gi|24649486|ref|NP_732931.1| LSm3, isoform A [Drosophila melanogaster]
gi|281362412|ref|NP_001163707.1| LSm3, isoform B [Drosophila melanogaster]
gi|23172108|gb|AAN13967.1| LSm3, isoform A [Drosophila melanogaster]
gi|189181823|gb|ACD81688.1| FI09213p [Drosophila melanogaster]
gi|272477132|gb|ACZ95002.1| LSm3, isoform B [Drosophila melanogaster]
Length = 103
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ AFD+H NMVL + E T + + ++ K R I +F+RGD VI+V
Sbjct: 39 ELRGRLHAFDQHLNMVLGDAEETVTTVEIDEETYEEVYKTAK-RTIPMLFVRGDGVILV 96
>gi|449433521|ref|XP_004134546.1| PREDICTED: small nuclear ribonucleoprotein-associated protein
B'-like [Cucumis sativus]
gi|449490639|ref|XP_004158663.1| PREDICTED: small nuclear ribonucleoprotein-associated protein
B'-like [Cucumis sativus]
Length = 284
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVI 87
QL+G+ AFDRH N+VL + E + +LP KGKK ++ R + + LRG+ VI
Sbjct: 26 QLVGKFMAFDRHMNLVLGDCEE-FRKLPP-AKGKKTNEERDERRTLGLVLLRGEEVI 80
>gi|110755468|ref|XP_001121255.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm3-like [Apis
mellifera]
gi|340729056|ref|XP_003402825.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm3-like isoform
1 [Bombus terrestris]
gi|340729058|ref|XP_003402826.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm3-like isoform
2 [Bombus terrestris]
gi|350401475|ref|XP_003486164.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like [Bombus
impatiens]
gi|380013750|ref|XP_003690912.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like [Apis
florea]
Length = 103
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NMVL E T + + ++ K R IS +F+RGD VI+V
Sbjct: 37 ELRGRLHAYDQHLNMVLGEAEETVTTVEIDEETYEEVYRTTK-RNISMLFVRGDGVILV 94
>gi|307104511|gb|EFN52764.1| hypothetical protein CHLNCDRAFT_26410 [Chlorella variabilis]
Length = 99
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTEL---PKTGKGKKKALPVNKDRFISKMFLRGDSVI 87
+L G++ A+D+H NM+L +V E T + +T + KA + R + +F+RGD VI
Sbjct: 32 ELRGKLHAYDQHLNMILGDVEETVTSVEIDEETFEEIIKASEGDSSRMVPYLFVRGDGVI 91
Query: 88 IV 89
+V
Sbjct: 92 LV 93
>gi|383857174|ref|XP_003704080.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like
[Megachile rotundata]
Length = 103
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NMVL E T + + ++ K R IS +F+RGD VI+V
Sbjct: 37 ELRGRLHAYDQHLNMVLGEAEETVTTVEIDEETYEEVYRTTK-RNISMLFVRGDGVILV 94
>gi|15218164|ref|NP_173542.1| U6 snRNA-associated Sm-like protein [Arabidopsis thaliana]
gi|8920641|gb|AAF81363.1|AC036104_12 Contains similarity to Lsm3 protein from Homo sapiens gb|AJ238095
and contains a conserved Sm protein PF|01423 motif. EST
gb|AI998441 comes from this gene [Arabidopsis thaliana]
gi|12248017|gb|AAG50100.1|AF334722_1 unknown protein [Arabidopsis thaliana]
gi|332191952|gb|AEE30073.1| U6 snRNA-associated Sm-like protein [Arabidopsis thaliana]
Length = 97
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ AFD+H NM+L +V E+ T + + ++ + K R + +F+RGD VI+V
Sbjct: 33 ELRGKLHAFDQHLNMILGDVEEVITTIEIDDETYEEIVRTTK-RTVPFLFVRGDGVILV 90
>gi|367051210|ref|XP_003655984.1| hypothetical protein THITE_2146609 [Thielavia terrestris NRRL
8126]
gi|347003248|gb|AEO69648.1| hypothetical protein THITE_2146609 [Thielavia terrestris NRRL
8126]
Length = 98
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D HCN+VL +V E + + + K V+K + +F+RGDSV+++
Sbjct: 35 ELKGRLHAYDSHCNLVLGDVEETIYIVDEDDDEEVKLQTVSKKSEM--LFVRGDSVVLI 91
>gi|307206257|gb|EFN84322.1| U6 snRNA-associated Sm-like protein LSm3 [Harpegnathos saltator]
Length = 96
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NMVL E T + + ++ K R IS +F+RGD VI+V
Sbjct: 30 ELRGRLHAYDQHLNMVLGEAEETVTTVEIDEETYEEVYRTTK-RNISMLFVRGDGVILV 87
>gi|198477433|ref|XP_002136614.1| GA29224 [Drosophila pseudoobscura pseudoobscura]
gi|198142906|gb|EDY71618.1| GA29224 [Drosophila pseudoobscura pseudoobscura]
Length = 167
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ AFD+H NMVL + E T + + ++ K R I +F+RGD VI+V
Sbjct: 103 ELRGRLHAFDQHLNMVLGDAEETVTTVEIDEETYEEVYKTTK-RTIPMLFVRGDGVILV 160
>gi|110743008|dbj|BAE99397.1| hypothetical protein [Arabidopsis thaliana]
Length = 96
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ AFD+H NM+L +V E+ T + + ++ + K R + +F+RGD VI+V
Sbjct: 32 ELRGKLHAFDQHLNMILGDVEEVITTIEIDDETYEEIVRTTK-RTVPFLFVRGDGVILV 89
>gi|313247586|emb|CBY15769.1| unnamed protein product [Oikopleura dioica]
Length = 103
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ AFD+H NM+L +V E T + + ++ K R I +F+RGD VI+V
Sbjct: 40 ELTGRLHAFDQHLNMILGDVEETVTNVEIDDETYEEIYRQVK-RSIPMLFVRGDGVILV 97
>gi|407038130|gb|EKE38950.1| LSM domain containing protein [Entamoeba nuttalli P19]
Length = 78
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 15/59 (25%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++RAFD+H N++L NV E++ E K + PV +++RGD VI++
Sbjct: 30 KLKGKLRAFDQHLNIILTNVSEIYQE-------KTRTFPV--------LYIRGDLVILI 73
>gi|195452910|ref|XP_002073554.1| GK14178 [Drosophila willistoni]
gi|194169639|gb|EDW84540.1| GK14178 [Drosophila willistoni]
Length = 256
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ AFD+H NMVL + E T + + ++ K R I +F+RGD VI+V
Sbjct: 192 ELRGRLHAFDQHLNMVLGDAEETVTTVEIDEETYEEVYKTTK-RTIPMLFVRGDGVILV 249
>gi|72008835|ref|XP_786272.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like
[Strongylocentrotus purpuratus]
Length = 105
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L +V E T + + ++ K R I +F+RGD VI+V
Sbjct: 39 ELKGRLHAYDQHLNMILGDVEETVTAVEIDEETYEEIYKSTK-RSIQMLFVRGDGVILV 96
>gi|297850550|ref|XP_002893156.1| hypothetical protein ARALYDRAFT_472357 [Arabidopsis lyrata subsp.
lyrata]
gi|297338998|gb|EFH69415.1| hypothetical protein ARALYDRAFT_472357 [Arabidopsis lyrata subsp.
lyrata]
Length = 98
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ AFD+H NM+L +V E+ T + + ++ + K R + +F+RGD VI+V
Sbjct: 33 ELRGKLHAFDQHLNMILGDVEEVITTVEIDDETYEEIVRTTK-RTVPFLFVRGDGVILV 90
>gi|242009034|ref|XP_002425298.1| snrnp sm protein, putative [Pediculus humanus corporis]
gi|212509063|gb|EEB12560.1| snrnp sm protein, putative [Pediculus humanus corporis]
Length = 102
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NMVL + E T + + ++ K R I +F+RGD VI+V
Sbjct: 37 ELRGRLHAYDQHLNMVLGDAEETVTTVEIDEETYEEVYKTTK-RTIPMLFVRGDGVILV 94
>gi|260822318|ref|XP_002606549.1| hypothetical protein BRAFLDRAFT_247418 [Branchiostoma floridae]
gi|229291892|gb|EEN62559.1| hypothetical protein BRAFLDRAFT_247418 [Branchiostoma floridae]
Length = 98
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L +V E T + + ++ K R I +F+RGD VI+V
Sbjct: 32 ELRGRLHAYDQHLNMILGDVEETVTTVEIDEETYEEIYKTTK-RNIPMLFVRGDGVILV 89
>gi|238880144|gb|EEQ43782.1| hypothetical protein CAWG_02031 [Candida albicans WO-1]
Length = 96
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 31 QLLGRVRAFDRHCNMVLENVRE-MWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G+++ +D HCNMVL + E ++T P+ K + +F+RGDSVI++
Sbjct: 35 ELKGKLQGYDSHCNMVLSDAEETIYTSNEDDDSENTSEEPIVKKTAM--VFVRGDSVILI 92
>gi|357615889|gb|EHJ69888.1| LSM Sm-like protein family member [Danaus plexippus]
Length = 102
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ A+D+H NMVL + E T + + ++ NK R I +F+RGD VI+V
Sbjct: 37 ELRGKLHAYDQHLNMVLGDAEETITTVEIDEETYEEVYRTNK-RNIPMLFVRGDGVILV 94
>gi|241959048|ref|XP_002422243.1| U6 snRNA-associated Sm-like protein, putative [Candida
dubliniensis CD36]
gi|223645588|emb|CAX40247.1| U6 snRNA-associated Sm-like protein, putative [Candida
dubliniensis CD36]
Length = 96
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 7/62 (11%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISK---MFLRGDSVI 87
+L G+++ +D HCNMVL + +E + G + + K+ + K +F+RGDSVI
Sbjct: 35 ELKGKLQGYDSHCNMVLSDAQETIYTSNEGGDSEDSS----KEPIVKKTAMVFVRGDSVI 90
Query: 88 IV 89
++
Sbjct: 91 LI 92
>gi|410080239|ref|XP_003957700.1| hypothetical protein KAFR_0E04140 [Kazachstania africana CBS
2517]
gi|372464286|emb|CCF58565.1| hypothetical protein KAFR_0E04140 [Kazachstania africana CBS
2517]
Length = 85
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 32 LLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
L G ++AFD HCN+VL + E EL G+ +K++ +F+RGDSV ++
Sbjct: 27 LTGTLQAFDSHCNIVLSDAVETIYELDGNGE------LSSKEKKSEMIFVRGDSVTLI 78
>gi|320167518|gb|EFW44417.1| hypothetical protein CAOG_02442 [Capsaspora owczarzaki ATCC
30864]
Length = 106
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L +V E T + + ++ + K R + +F+RGD VI+V
Sbjct: 42 ELRGRLHAYDQHLNMILSDVEETVTTVEIDEETFEEMVKTTK-REVPMLFVRGDGVILV 99
>gi|146098272|ref|XP_001468379.1| small nuclear ribonucleoprotein SmD2 [Leishmania infantum JPCM5]
gi|157875373|ref|XP_001686081.1| small nuclear ribonucleoprotein SmD2 [Leishmania major strain
Friedlin]
gi|398021989|ref|XP_003864157.1| small nuclear ribonucleoprotein SmD2 [Leishmania donovani]
gi|401428184|ref|XP_003878575.1| small nuclear ribonucleoprotein SmD2 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|68129154|emb|CAJ06890.1| small nuclear ribonucleoprotein SmD2 [Leishmania major strain
Friedlin]
gi|134072746|emb|CAM71463.1| small nuclear ribonucleoprotein SmD2 [Leishmania infantum JPCM5]
gi|322494823|emb|CBZ30127.1| small nuclear ribonucleoprotein SmD2 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322502391|emb|CBZ37475.1| small nuclear ribonucleoprotein SmD2 [Leishmania donovani]
Length = 103
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 10/62 (16%)
Query: 32 LLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLR 91
LL V AFD+H N+VL+ V+E+ TE G ++ K R I +FLRG+SVI +++
Sbjct: 52 LLAHVIAFDKHFNLVLKGVQEI-TE----SHGSEQ-----KQRTIENLFLRGESVIFIVK 101
Query: 92 NP 93
P
Sbjct: 102 LP 103
>gi|115441259|ref|NP_001044909.1| Os01g0866700 [Oryza sativa Japonica Group]
gi|56785201|dbj|BAD81919.1| small nuclear ribonucleoprotein-like [Oryza sativa Japonica
Group]
gi|113534440|dbj|BAF06823.1| Os01g0866700 [Oryza sativa Japonica Group]
gi|125528497|gb|EAY76611.1| hypothetical protein OsI_04561 [Oryza sativa Indica Group]
gi|125572761|gb|EAZ14276.1| hypothetical protein OsJ_04201 [Oryza sativa Japonica Group]
gi|215708805|dbj|BAG94074.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765758|dbj|BAG87455.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 104
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ A+D+H NM+L +V E+ T + + ++ + K R I +F+RGD VI+V
Sbjct: 40 ELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTK-RTIPFLFVRGDGVILV 97
>gi|350536415|ref|NP_001233054.1| uncharacterized protein LOC100167860 [Acyrthosiphon pisum]
gi|239792347|dbj|BAH72527.1| ACYPI008615 [Acyrthosiphon pisum]
Length = 106
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ AFD+H NMVL E T + + ++ K R I +F+RGD VI+V
Sbjct: 42 ELRGRLHAFDQHLNMVLGEAEETITTIEVDEETFEEVYKTTK-RTIPMLFVRGDGVILV 99
>gi|254581938|ref|XP_002496954.1| ZYRO0D11968p [Zygosaccharomyces rouxii]
gi|238939846|emb|CAR28021.1| ZYRO0D11968p [Zygosaccharomyces rouxii]
Length = 93
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 8 FSFRNSQTTLMLFCFWALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKA 67
F F QT + FW E + ++ G++ FD N+V+E+ E+ + P+TGK
Sbjct: 16 FGFLQQQTVV---TFWLFEQLGTRIRGKISGFDEFMNVVIEDATEIPVD-PQTGKEH--- 68
Query: 68 LPVNKDRFISKMFLRGDSVIIV 89
+++ + + K+ L+GD++ ++
Sbjct: 69 --LDRGKKLGKILLKGDNITLI 88
>gi|195573319|ref|XP_002104641.1| GD21053 [Drosophila simulans]
gi|194200568|gb|EDX14144.1| GD21053 [Drosophila simulans]
Length = 218
Score = 40.8 bits (94), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ AFD+H NMVL + E T + + ++ K R I +F+RGD VI+V
Sbjct: 39 ELRGRLHAFDQHLNMVLGDAEETVTTVEIDEETYEEVYKTAK-RTIPMLFVRGDGVILV 96
>gi|391337947|ref|XP_003743325.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like
[Metaseiulus occidentalis]
Length = 103
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NMVL +V E T + + ++ ++ R I +F+RGD VI+V
Sbjct: 38 ELRGRLHAYDQHLNMVLGDVEETVTSVEIDEETFEEVYKTSR-RSIPMLFVRGDGVILV 95
>gi|307178237|gb|EFN67022.1| U6 snRNA-associated Sm-like protein LSm3 [Camponotus floridanus]
Length = 98
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ AFD+H NMVL +V E+ + + + + + K R I +F+RGD VI+V
Sbjct: 37 ELRGKLHAFDQHLNMVLGDVEEIIN-IVEIDEETYEEIYRQKKRTIQMLFVRGDGVILV 94
>gi|345571011|gb|EGX53826.1| hypothetical protein AOL_s00004g485 [Arthrobotrys oligospora ATCC
24927]
Length = 93
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D HCN+VL V E + + + + N + +F+RGDSV+I+
Sbjct: 35 ELRGRLHAYDSHCNLVLGEVEETIYVVDEDDDDTIRTVKKNSE----MLFVRGDSVVII 89
>gi|449302452|gb|EMC98461.1| hypothetical protein BAUCODRAFT_138202 [Baudoinia compniacensis
UAMH 10762]
Length = 95
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKM-FLRGDSVIIV 89
+L GR+ A+D HCN+VL V E ++ + G+ V + S+M F+RGDSV+++
Sbjct: 36 ELQGRLHAYDSHCNLVLGEVTETIYQVAEEAGGED----VRTLKKQSEMLFVRGDSVVLI 91
>gi|400599588|gb|EJP67285.1| U6 snRNA-associated Sm-like protein LSm3 [Beauveria bassiana
ARSEF 2860]
Length = 95
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ A+D HCN+VL V E + + + + K++ R +F+RGDSV+++
Sbjct: 35 ELKGKLHAYDSHCNLVLGEVEETIYGVEEDDEEEAKSVS----RKSEMLFVRGDSVVLI 89
>gi|242059351|ref|XP_002458821.1| hypothetical protein SORBIDRAFT_03g040930 [Sorghum bicolor]
gi|194699902|gb|ACF84035.1| unknown [Zea mays]
gi|195628156|gb|ACG35908.1| U6 snRNA-associated Sm-like protein LSm3 [Zea mays]
gi|195643108|gb|ACG41022.1| U6 snRNA-associated Sm-like protein LSm3 [Zea mays]
gi|241930796|gb|EES03941.1| hypothetical protein SORBIDRAFT_03g040930 [Sorghum bicolor]
Length = 98
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ A+D+H NM+L +V E+ T + + ++ + K R I +F+RGD VI+V
Sbjct: 34 ELRGKLHAYDQHLNMILGDVEEVVTTVEIDDETYEEIVRTTK-RTIPFLFVRGDGVILV 91
>gi|225713042|gb|ACO12367.1| U6 snRNA-associated Sm-like protein LSm3 [Lepeophtheirus
salmonis]
Length = 105
Score = 40.8 bits (94), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L V E T + + ++ K R I +F+RGD VI+V
Sbjct: 40 ELKGRLNAYDQHLNMILGEVEETVTSIEIDEETYEEVYRTTK-RNIPMLFVRGDGVILV 97
>gi|291239206|ref|XP_002739490.1| PREDICTED: Lsm3 protein-like [Saccoglossus kowalevskii]
Length = 103
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L +V E T + + ++ K R I +F+RGD VI+V
Sbjct: 37 ELRGRLHAYDQHLNMILGDVEETVTTVEIDEETYEEIYKSTK-RNIPMLFVRGDGVILV 94
>gi|196003100|ref|XP_002111417.1| hypothetical protein TRIADDRAFT_23866 [Trichoplax adhaerens]
gi|190585316|gb|EDV25384.1| hypothetical protein TRIADDRAFT_23866 [Trichoplax adhaerens]
Length = 104
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NMVL +V E T + + ++ +K R I +++RGD VI+V
Sbjct: 38 ELRGRLHAYDQHLNMVLGDVEETITTVEIDDETFEELYKTSK-RQIPMLYVRGDGVILV 95
>gi|339240555|ref|XP_003376203.1| putative LSM domain protein [Trichinella spiralis]
gi|316975093|gb|EFV58552.1| putative LSM domain protein [Trichinella spiralis]
Length = 109
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NMVL +V E+ T + + ++ N R +F+RGD VI+V
Sbjct: 39 ELRGRLHAYDQHLNMVLGDVEEIETIVEIDDETYEEVYTKNT-RTFPMLFIRGDGVILV 96
>gi|66362586|ref|XP_628259.1| small nuclear ribonucleoprotein [Cryptosporidium parvum Iowa II]
gi|46229856|gb|EAK90674.1| small nuclear ribonucleoprotein [Cryptosporidium parvum Iowa II]
Length = 95
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G + A+D H NMVL NV E + E + + K R I +FLRGD +I+V
Sbjct: 28 ELKGTLYAYDPHMNMVLGNVEETYYEEESKSDTQNSEKKLKKRR-IEMLFLRGDLIILV 85
>gi|324523019|gb|ADY48176.1| U6 snRNA-associated Sm-like protein LSm3 [Ascaris suum]
gi|324523877|gb|ADY48319.1| U6 snRNA-associated Sm-like protein LSm3 [Ascaris suum]
gi|324527206|gb|ADY48760.1| U6 snRNA-associated Sm-like protein LSm3 [Ascaris suum]
gi|324527733|gb|ADY48837.1| U6 snRNA-associated Sm-like protein LSm3 [Ascaris suum]
gi|324528368|gb|ADY48905.1| U6 snRNA-associated Sm-like protein LSm3 [Ascaris suum]
gi|324528673|gb|ADY48938.1| U6 snRNA-associated Sm-like protein LSm3 [Ascaris suum]
Length = 105
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 34 GRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
GR+ AFD+H NM+L V E T + + + + + R I +F+RGD++I+V
Sbjct: 44 GRLHAFDQHLNMILSQVEETVTTV-ELDEENFEEMHKQTKRHIPMLFVRGDAIILV 98
>gi|332021459|gb|EGI61827.1| U6 snRNA-associated Sm-like protein LSm3 [Acromyrmex echinatior]
Length = 125
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ AFD+H NMVL +V E+ + + + + + K R I +F+RGD VI+V
Sbjct: 64 ELRGKLHAFDQHLNMVLGDVEEIIN-IVEIDEETYEEIYRQKKRTIQMLFVRGDGVILV 121
>gi|326928055|ref|XP_003210200.1| PREDICTED: LOW QUALITY PROTEIN: u6 snRNA-associated Sm-like protein
LSm3-like [Meleagris gallopavo]
Length = 108
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L +V E T + + ++ K R I +F+RGD V++V
Sbjct: 44 ELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEIYKSTK-RNIPMLFVRGDGVVLV 101
>gi|198433468|ref|XP_002128408.1| PREDICTED: similar to U6 snRNA-associated Sm-like protein LSm3
[Ciona intestinalis]
Length = 105
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NMVL V E T + + ++ K R I +F+RGD VI+V
Sbjct: 40 ELRGRLHAYDQHLNMVLGEVEETVTAVEIDEETYEEIYKQTK-RTIPMLFVRGDGVILV 97
>gi|350536047|ref|NP_001232226.1| putative sm like protein U6 snRNA-associated Sm-like protein
[Taeniopygia guttata]
gi|50754429|ref|XP_414380.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3 [Gallus
gallus]
gi|327265982|ref|XP_003217786.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm3-like [Anolis
carolinensis]
gi|197127206|gb|ACH43704.1| putative sm like protein U6 snRNA-associated Sm-like protein
[Taeniopygia guttata]
Length = 102
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L +V E T + + ++ K R I +F+RGD V++V
Sbjct: 38 ELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEIYKSTK-RNIPMLFVRGDGVVLV 95
>gi|440801404|gb|ELR22424.1| LSM Smlike protein family member, putative [Acanthamoeba
castellanii str. Neff]
Length = 103
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ A+D+H NMVL +V E T + + ++ + K R + +F+RGD VI+V
Sbjct: 39 ELRGKLHAYDQHLNMVLGDVEETVTTVEMDEETDEEIIKRRK-RTVEMLFVRGDGVILV 96
>gi|281344332|gb|EFB19916.1| hypothetical protein PANDA_009501 [Ailuropoda melanoleuca]
gi|351695767|gb|EHA98685.1| U6 snRNA-associated Sm-like protein LSm3, partial [Heterocephalus
glaber]
gi|440903568|gb|ELR54207.1| U6 snRNA-associated Sm-like protein LSm3, partial [Bos grunniens
mutus]
Length = 96
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L +V E T + + ++ K R I +F+RGD V++V
Sbjct: 32 ELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEIYKSTK-RNIPMLFVRGDGVVLV 89
>gi|389582457|dbj|GAB65195.1| U6 snRNA-associated Sm-like protein LSm3 [Plasmodium cynomolgi
strain B]
Length = 91
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 17/66 (25%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKM-------FLRG 83
++ G++ A+D H NM+L N RE + K+++ N + I K+ F+RG
Sbjct: 31 EIRGKLDAYDNHLNMILSNARETY----------KQSVTENDEESIKKIERNLDMVFVRG 80
Query: 84 DSVIIV 89
DS+I+V
Sbjct: 81 DSIILV 86
>gi|154344332|ref|XP_001568110.1| small nuclear ribonucleoprotein SmD2 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065444|emb|CAM40878.1| small nuclear ribonucleoprotein SmD2 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 103
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 10/62 (16%)
Query: 32 LLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLR 91
LL V AFD+H N+VL+ V+E+ TE G ++ K R I +FLRG+SV+ +++
Sbjct: 52 LLAHVIAFDKHFNLVLKGVQEI-TE----SHGSEQ-----KQRTIENLFLRGESVVFIVK 101
Query: 92 NP 93
P
Sbjct: 102 LP 103
>gi|7657315|ref|NP_055278.1| U6 snRNA-associated Sm-like protein LSm3 [Homo sapiens]
gi|13385806|ref|NP_080585.1| U6 snRNA-associated Sm-like protein LSm3 [Mus musculus]
gi|82697405|ref|NP_001032564.1| U6 snRNA-associated Sm-like protein LSm3 [Bos taurus]
gi|157819827|ref|NP_001100081.1| U6 snRNA-associated Sm-like protein LSm3 [Rattus norvegicus]
gi|349732213|ref|NP_001231857.1| LSM3 homolog, U6 small nuclear RNA associated [Sus scrofa]
gi|386780796|ref|NP_001248293.1| U6 snRNA-associated Sm-like protein LSm3 [Macaca mulatta]
gi|73984534|ref|XP_849275.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3 isoform 1
[Canis lupus familiaris]
gi|73984536|ref|XP_858392.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3 isoform 2
[Canis lupus familiaris]
gi|114585529|ref|XP_001157526.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3 isoform 1
[Pan troglodytes]
gi|291393472|ref|XP_002713225.1| PREDICTED: Lsm3 protein [Oryctolagus cuniculus]
gi|291396667|ref|XP_002714873.1| PREDICTED: Lsm3 protein [Oryctolagus cuniculus]
gi|296225915|ref|XP_002758699.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like
[Callithrix jacchus]
gi|297670014|ref|XP_002813175.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3 [Pongo
abelii]
gi|301770625|ref|XP_002920730.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm3-like
[Ailuropoda melanoleuca]
gi|332231761|ref|XP_003265063.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3 isoform 1
[Nomascus leucogenys]
gi|338714585|ref|XP_003363113.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm3-like [Equus
caballus]
gi|344275971|ref|XP_003409784.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like
[Loxodonta africana]
gi|348554867|ref|XP_003463246.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like [Cavia
porcellus]
gi|354465501|ref|XP_003495218.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like
[Cricetulus griseus]
gi|395847186|ref|XP_003796264.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3 [Otolemur
garnettii]
gi|397511859|ref|XP_003826280.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3 [Pan
paniscus]
gi|402887020|ref|XP_003906905.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3 [Papio
anubis]
gi|403268321|ref|XP_003926225.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3 [Saimiri
boliviensis boliviensis]
gi|410951784|ref|XP_003982573.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3 [Felis catus]
gi|426249725|ref|XP_004018600.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3 [Ovis aries]
gi|426339551|ref|XP_004033712.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3 [Gorilla
gorilla gorilla]
gi|55977170|sp|P62311.2|LSM3_MOUSE RecName: Full=U6 snRNA-associated Sm-like protein LSm3
gi|61227725|sp|P62310.2|LSM3_HUMAN RecName: Full=U6 snRNA-associated Sm-like protein LSm3
gi|115311781|sp|Q32PE9.3|LSM3_BOVIN RecName: Full=U6 snRNA-associated Sm-like protein LSm3
gi|5919147|gb|AAD56227.1|AF182289_1 U6 snRNA-associated Sm-like protein LSm3 [Homo sapiens]
gi|10197636|gb|AAG14954.1|AF182418_1 MDS017 [Homo sapiens]
gi|5262856|emb|CAB45866.1| Lsm3 protein [Homo sapiens]
gi|12833592|dbj|BAB22585.1| unnamed protein product [Mus musculus]
gi|12841666|dbj|BAB25303.1| unnamed protein product [Mus musculus]
gi|13937895|gb|AAH07055.1| LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|32484176|gb|AAH54368.1| LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Mus musculus]
gi|38566272|gb|AAH62875.1| LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Mus musculus]
gi|48146487|emb|CAG33466.1| LSM3 [Homo sapiens]
gi|81294362|gb|AAI08143.1| LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Bos taurus]
gi|119584594|gb|EAW64190.1| LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|148666888|gb|EDK99304.1| LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Mus musculus]
gi|149036753|gb|EDL91371.1| LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)
(predicted) [Rattus norvegicus]
gi|169144524|gb|ACA49102.1| LSM3-like protein [Ailuropoda melanoleuca]
gi|208966680|dbj|BAG73354.1| LSM3 homolog, U6 small nuclear RNA associated [synthetic
construct]
gi|296474665|tpg|DAA16780.1| TPA: U6 snRNA-associated Sm-like protein LSm3 [Bos taurus]
gi|355564515|gb|EHH21015.1| hypothetical protein EGK_03987 [Macaca mulatta]
gi|355732826|gb|AES10821.1| LSM3-like protein, U6 small nuclear RNA associated [Mustela
putorius furo]
gi|355786357|gb|EHH66540.1| hypothetical protein EGM_03552 [Macaca fascicularis]
gi|380811798|gb|AFE77774.1| U6 snRNA-associated Sm-like protein LSm3 [Macaca mulatta]
gi|410207716|gb|JAA01077.1| LSM3 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410248718|gb|JAA12326.1| LSM3 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410291826|gb|JAA24513.1| LSM3 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|417395685|gb|JAA44891.1| Putative small nuclear ribonucleoprotein snrnp lsm3 [Desmodus
rotundus]
gi|431916913|gb|ELK16669.1| U6 snRNA-associated Sm-like protein LSm3 [Pteropus alecto]
Length = 102
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L +V E T + + ++ K R I +F+RGD V++V
Sbjct: 38 ELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEIYKSTK-RNIPMLFVRGDGVVLV 95
>gi|224115254|ref|XP_002332199.1| predicted protein [Populus trichocarpa]
gi|222875306|gb|EEF12437.1| predicted protein [Populus trichocarpa]
Length = 289
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVI 87
QL+G+ AFDRH N+VL + E + +LP KGKK R + + LRG+ VI
Sbjct: 26 QLVGKFMAFDRHMNLVLGDCEE-FRKLPP-AKGKKNNEEREDRRTLGLVLLRGEEVI 80
>gi|118482995|gb|ABK93409.1| unknown [Populus trichocarpa]
Length = 286
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVI 87
QL+G+ AFDRH N+VL + E + +LP KGKK R + + LRG+ VI
Sbjct: 26 QLVGKFMAFDRHMNLVLGDCEE-FRKLPP-AKGKKNNEEREDRRTLGLVLLRGEEVI 80
>gi|449276686|gb|EMC85118.1| U6 snRNA-associated Sm-like protein LSm3, partial [Columba livia]
Length = 95
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L +V E T + + ++ K R I +F+RGD V++V
Sbjct: 31 ELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEIYKSTK-RNIPMLFVRGDGVVLV 88
>gi|126336227|ref|XP_001366562.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm3-like isoform
1 [Monodelphis domestica]
gi|149636433|ref|XP_001506609.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like
[Ornithorhynchus anatinus]
Length = 102
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L +V E T + + ++ K R I +F+RGD V++V
Sbjct: 38 ELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEIYKSTK-RNIPMLFVRGDGVVLV 95
>gi|259489765|tpe|CBF90306.1| TPA: U6 small nuclear ribonucleoprotein (Lsm3), putative
(AFU_orthologue; AFUA_5G12570) [Aspergillus nidulans
FGSC A4]
Length = 96
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D HCN+VL +V E + + ++ + K + +F+RGDSV+++
Sbjct: 36 ELKGRLHAYDSHCNLVLGDVEETIYVVEEDENEQEHIRTIKKQEEM--LFVRGDSVVLI 92
>gi|410930335|ref|XP_003978554.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like
[Takifugu rubripes]
gi|47206420|emb|CAF94178.1| unnamed protein product [Tetraodon nigroviridis]
Length = 102
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L +V E T + + + + L + R I +F+RGD V++V
Sbjct: 38 ELRGRLHAYDQHLNMILGDVEETVTTV-EIDEETYEELYKSTKRNIPMLFVRGDGVVLV 95
>gi|348514181|ref|XP_003444619.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like
[Oreochromis niloticus]
gi|348520372|ref|XP_003447702.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like
[Oreochromis niloticus]
Length = 102
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L +V E T + + + + L + R I +F+RGD V++V
Sbjct: 38 ELRGRLHAYDQHLNMILGDVEETVTTV-EIDEETYEELYKSTKRNIPMLFVRGDGVVLV 95
>gi|351724771|ref|NP_001236557.1| uncharacterized protein LOC100306547 [Glycine max]
gi|255628849|gb|ACU14769.1| unknown [Glycine max]
Length = 97
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ A+D+H NM+L +V E+ T + + ++ + K R + +F+RGD VI+V
Sbjct: 33 ELRGKLHAYDQHLNMILGDVEEIITTVEIDDETYEEIVRTTK-RTVPFLFVRGDGVILV 90
>gi|432858806|ref|XP_004068948.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like [Oryzias
latipes]
Length = 102
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L +V E T + + + + L + R I +F+RGD V++V
Sbjct: 38 ELRGRLHAYDQHLNMILGDVEETVTTV-EIDEETYEELYKSTKRNIPMLFVRGDGVVLV 95
>gi|189053316|dbj|BAG35122.1| unnamed protein product [Homo sapiens]
Length = 102
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L +V E T + + ++ K R I +F+RGD V++V
Sbjct: 38 ELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEIYKSTK-RNIPMLFVRGDGVVLV 95
>gi|288683438|ref|NP_001165758.1| LSM3 homolog, U6 small nuclear RNA associated [Xenopus (Silurana)
tropicalis]
gi|161612120|gb|AAI56008.1| Unknown (protein for MGC:185368) [Xenopus (Silurana) tropicalis]
Length = 102
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L +V E T + + ++ K R I +F+RGD V++V
Sbjct: 38 ELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEIYKSTK-RNIPMLFVRGDGVVLV 95
>gi|351722343|ref|NP_001235961.1| uncharacterized protein LOC100499782 [Glycine max]
gi|255626487|gb|ACU13588.1| unknown [Glycine max]
Length = 97
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ A+D+H NM+L +V E+ T + + ++ + K R + +F+RGD VI+V
Sbjct: 33 ELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTK-RTVPFLFVRGDGVILV 90
>gi|168005030|ref|XP_001755214.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693807|gb|EDQ80158.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 97
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ A+D+H NM+L V E+ T + + ++ + ++ R + +F+RGD VI+V
Sbjct: 33 ELRGKLHAYDQHLNMILGEVEEVTTSVEIDDETYEEIVRTSR-RTVPYLFVRGDGVILV 90
>gi|140832760|gb|AAI35705.1| LOC100125161 protein [Xenopus (Silurana) tropicalis]
Length = 100
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L +V E T + + ++ K R I +F+RGD V++V
Sbjct: 36 ELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEIYKSTK-RNIPMLFVRGDGVVLV 93
>gi|365984381|ref|XP_003669023.1| hypothetical protein NDAI_0C01190 [Naumovozyma dairenensis CBS
421]
gi|343767791|emb|CCD23780.1| hypothetical protein NDAI_0C01190 [Naumovozyma dairenensis CBS
421]
Length = 94
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 8 FSFRNSQTTLMLFCFWALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKA 67
F + QT + FW E + +++ G++ FD N+V+++ E+ + PKTG K
Sbjct: 18 FGYLQQQTPV---TFWLYEQVGIRITGKISGFDEFMNVVIDDAIEIPVD-PKTGVENKA- 72
Query: 68 LPVNKDRFISKMFLRGDSVIIVLRN 92
K + ++ L+GD++ ++ N
Sbjct: 73 ----KGTQLGRIMLKGDNITLITSN 93
>gi|388493932|gb|AFK35032.1| unknown [Lotus japonicus]
gi|388511495|gb|AFK43809.1| unknown [Lotus japonicus]
Length = 97
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ A+D+H NM+L +V E+ T + + ++ + K R + +F+RGD VI+V
Sbjct: 33 ELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTK-RTVPFLFVRGDGVILV 90
>gi|225717088|gb|ACO14390.1| U6 snRNA-associated Sm-like protein LSm3 [Esox lucius]
Length = 102
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L +V E T + + ++ K R I +F+RGD V++V
Sbjct: 38 ELRGRLHAYDQHLNMILGDVEETVTTVEIDEETYEEIYKSTK-RNIPMLFVRGDGVVLV 95
>gi|326678810|ref|XP_003201179.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm3-like isoform
1 [Danio rerio]
gi|326678812|ref|XP_003201180.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm3-like isoform
2 [Danio rerio]
Length = 102
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L +V E T + + ++ K R I +F+RGD V++V
Sbjct: 38 ELRGRLHAYDQHLNMILGDVEETVTTVEIDEETYEEIYKSTK-RNIPMLFVRGDGVVLV 95
>gi|225707460|gb|ACO09576.1| U6 snRNA-associated Sm-like protein LSm3 [Osmerus mordax]
Length = 104
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L +V E T + + + + L + R I +F+RGD V++V
Sbjct: 40 ELRGRLHAYDQHLNMILGDVEETVTTV-EIDEETYEELYKSTKRNIPMLFVRGDGVVLV 97
>gi|340370917|ref|XP_003383992.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm3-like
[Amphimedon queenslandica]
Length = 105
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+L GR+ FD+H NM++ V E T L + ++ + R I +F+RGD VI++
Sbjct: 38 ELTGRLHGFDQHLNMIMSEVEETVTTLELDEETFEEIYRTTQ-RTIPMIFIRGDGVILIS 96
Query: 91 RNP 93
+P
Sbjct: 97 PSP 99
>gi|221053504|ref|XP_002258126.1| ribonucleoprotein [Plasmodium knowlesi strain H]
gi|193807959|emb|CAQ38663.1| ribonucleoprotein, putative [Plasmodium knowlesi strain H]
Length = 91
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 7/61 (11%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMW--TELPKTGKGKKKALPVNKDRFISKMFLRGDSVII 88
++ G++ A+D H NM+L N RE + T + + KK +R + +F+RGDS+I+
Sbjct: 31 EIRGKLDAYDNHLNMILSNARETYKQTVMENDEESVKKI-----ERNLDMVFVRGDSIIL 85
Query: 89 V 89
V
Sbjct: 86 V 86
>gi|392568264|gb|EIW61438.1| like-Sm ribonucleo protein [Trametes versicolor FP-101664 SS1]
Length = 97
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 31 QLLGRVRAFDRHCNMVLENVRE--MWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVII 88
+L G + A+D H N++L +V E M + P+ G + + + K R + +F+RGD VI+
Sbjct: 32 ELTGILHAYDGHMNLILSDVEETIMIVDQPEGGPEEHSTVNIAK-RKMDMLFVRGDGVIL 90
Query: 89 V 89
V
Sbjct: 91 V 91
>gi|357475053|ref|XP_003607812.1| U6 snRNA-associated Sm-like protein LSm3 [Medicago truncatula]
gi|355508867|gb|AES90009.1| U6 snRNA-associated Sm-like protein LSm3 [Medicago truncatula]
Length = 98
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ A+D+H NM+L +V E+ T + + ++ + K R + +F+RGD VI+V
Sbjct: 34 ELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTK-RTVPFLFVRGDGVILV 91
>gi|145249892|ref|XP_001401285.1| U6 snRNA-associated Sm-like protein LSm3 [Aspergillus niger CBS
513.88]
gi|134081970|emb|CAK46655.1| unnamed protein product [Aspergillus niger]
Length = 96
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D HCN+VL +V E + + ++ + K + +F+RGDSV+++
Sbjct: 36 ELKGRLHAYDSHCNLVLGDVEETIYVVEEDENEQETLRTIKKQEEM--LFVRGDSVVLI 92
>gi|302696809|ref|XP_003038083.1| hypothetical protein SCHCODRAFT_102915 [Schizophyllum commune
H4-8]
gi|300111780|gb|EFJ03181.1| hypothetical protein SCHCODRAFT_102915, partial [Schizophyllum
commune H4-8]
Length = 95
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 31 QLLGRVRAFDRHCNMVLENVRE--MWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVII 88
QL G + A+D H N++L +V E M ++P+ + + V K R + +F+RGD VI+
Sbjct: 31 QLEGVLHAYDGHMNLILSDVEETIMIVDVPEGAPESQGTVNVAK-RKMGMLFVRGDGVIL 89
Query: 89 V 89
V
Sbjct: 90 V 90
>gi|344231234|gb|EGV63116.1| LSM-domain-containing protein [Candida tenuis ATCC 10573]
Length = 88
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 11/60 (18%)
Query: 31 QLLGRVRAFDRHCNMVLENVRE-MWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
++ G+++ +D HCNMVL + E ++ E +GK + +F+RGDSVI++
Sbjct: 34 EMKGKLQGYDSHCNMVLSDATEYIYAENQDKPQGKSTDM----------VFIRGDSVILI 83
>gi|225713400|gb|ACO12546.1| U6 snRNA-associated Sm-like protein LSm3 [Lepeophtheirus
salmonis]
Length = 105
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L V E T + + ++ K R I +F+RGD VI+V
Sbjct: 40 ELKGRLNAYDQHLNMILGEVAETVTSIEIDEETYEEVYRTTK-RNIPMLFVRGDGVILV 97
>gi|363748022|ref|XP_003644229.1| hypothetical protein Ecym_1162 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887861|gb|AET37412.1| hypothetical protein Ecym_1162 [Eremothecium cymbalariae
DBVPG#7215]
Length = 83
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 17/69 (24%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKD-RFISK----MFLRGDS 85
+L G ++AFD HCN+VL + E EL V+ + RF +K +F+RGDS
Sbjct: 26 KLTGTLQAFDSHCNIVLSDAEETIYEL------------VDGNLRFETKTSEMIFVRGDS 73
Query: 86 VIIVLRNPK 94
V +V P+
Sbjct: 74 VTLVTAQPE 82
>gi|255583342|ref|XP_002532432.1| snrnp sm protein, putative [Ricinus communis]
gi|223527852|gb|EEF29947.1| snrnp sm protein, putative [Ricinus communis]
Length = 97
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ A+D+H NM+L +V E+ T + + ++ + K R + +F+RGD VI+V
Sbjct: 33 ELRGKLHAYDQHLNMILGDVEEVVTTVEIDDETYEEIVRTTK-RTVPFLFVRGDGVILV 90
>gi|432110929|gb|ELK34403.1| U6 snRNA-associated Sm-like protein LSm3 [Myotis davidii]
Length = 70
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L +V E T + + ++ K R I +F+RGD V++V
Sbjct: 6 ELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEIYKSTK-RNIPMLFVRGDGVVLV 63
>gi|387914480|gb|AFK10849.1| LSM3-like protein [Callorhinchus milii]
gi|392883596|gb|AFM90630.1| LSM3-like protein, U6 small nuclear RNA associated [Callorhinchus
milii]
gi|392883672|gb|AFM90668.1| LSM3-like protein, U6 small nuclear RNA associated [Callorhinchus
milii]
gi|392884122|gb|AFM90893.1| LSM3-like protein, U6 small nuclear RNA associated [Callorhinchus
milii]
Length = 102
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L +V E T + + ++ K R I +F+RGD V++V
Sbjct: 38 ELRGRLHAYDQHLNMILGDVEETVTTVEIDEETYEEIYKSTK-RNIPMLFVRGDGVVLV 95
>gi|444705548|gb|ELW46970.1| U6 snRNA-associated Sm-like protein LSm3 [Tupaia chinensis]
Length = 70
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L +V E T + + ++ K R I +F+RGD V++V
Sbjct: 6 ELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEIYKSTK-RNIPMLFVRGDGVVLV 63
>gi|356501499|ref|XP_003519562.1| PREDICTED: small nuclear ribonucleoprotein-associated protein
B'-like [Glycine max]
Length = 282
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKD--RFISKMFLRGDSVI 87
QL+G+ AFDRH N+VL + E + +LP KGKK A +++ R + + LRG+ VI
Sbjct: 26 QLVGKFMAFDRHMNLVLGDCEE-FRKLPPA-KGKKPAEGADREDRRTLGLVLLRGEEVI 82
>gi|147903851|ref|NP_001091408.1| LSM3 homolog, U6 small nuclear RNA associated [Xenopus laevis]
gi|126631439|gb|AAI33265.1| LOC100049097 protein [Xenopus laevis]
Length = 102
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L +V E T + + ++ K R I +F+RGD V++V
Sbjct: 38 ELRGRLNAYDQHLNMILGDVEETVTTIEIDEETYEEIYKSTK-RNIPMLFVRGDGVVLV 95
>gi|300681475|emb|CBH32569.1| U6 snRNA-associated Sm-like protein, expressed [Triticum
aestivum]
Length = 98
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ A+D+H NM+L +V E+ T + + ++ + + R I +F+RGD VI+V
Sbjct: 34 ELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTR-RAIPFLFVRGDGVILV 91
>gi|167518686|ref|XP_001743683.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777645|gb|EDQ91261.1| predicted protein [Monosiga brevicollis MX1]
Length = 93
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
QL G + A+D+H NMVL NV E + + ++ + K R + +++RGD VI+V
Sbjct: 30 QLEGTLHAYDQHMNMVLSNVVETLATVDVDDETGEELVKTAK-RVLPMLYVRGDGVILV 87
>gi|387593780|gb|EIJ88804.1| hypothetical protein NEQG_00623 [Nematocida parisii ERTm3]
gi|387595086|gb|EIJ92712.1| hypothetical protein NEPG_02403 [Nematocida parisii ERTm1]
Length = 91
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+++G + D+H N++L + E T+LP KGKK+ + R + +F+RG++VI +
Sbjct: 29 EVVGTMELTDKHMNVLLRDAVETRTQLPSMLKGKKRQIKKVFTRTLGNVFIRGETVIAI 87
>gi|226443270|ref|NP_001139841.1| U6 snRNA-associated Sm-like protein LSm3 [Salmo salar]
gi|221219250|gb|ACM08286.1| U6 snRNA-associated Sm-like protein LSm3 [Salmo salar]
gi|221219990|gb|ACM08656.1| U6 snRNA-associated Sm-like protein LSm3 [Salmo salar]
gi|221221030|gb|ACM09176.1| U6 snRNA-associated Sm-like protein LSm3 [Salmo salar]
Length = 102
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L +V E T + + ++ K R I +F+RGD V++V
Sbjct: 38 ELRGRLNAYDQHLNMILGDVEETVTTVEIDEETYEEIYKSTK-RNIPMLFVRGDGVVLV 95
>gi|357126029|ref|XP_003564691.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like isoform
1 [Brachypodium distachyon]
Length = 98
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ A+D+H NM+L +V E+ T + + ++ + + R I +F+RGD VI+V
Sbjct: 34 ELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTR-RTIPFLFVRGDGVILV 91
>gi|91087977|ref|XP_973274.1| PREDICTED: similar to LSM Sm-like protein family member
[Tribolium castaneum]
gi|270011905|gb|EFA08353.1| hypothetical protein TcasGA2_TC005996 [Tribolium castaneum]
Length = 101
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
++ GR+ A+D+H NM+L + E T + + ++ K R I +F+RGD VI+V
Sbjct: 37 EIRGRLHAYDQHMNMILSDAEETITTVEIDEETYEEVYRTTK-RNIPMLFVRGDGVILV 94
>gi|110671432|gb|ABG81967.1| putative U6 snRNA-associated Sm-like protein LSm3 [Diaphorina
citri]
Length = 101
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 32 LLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
L G++ A+D+H NMVL +V E T + + ++ K R I +F+RGD VI+V
Sbjct: 36 LRGKLHAYDQHLNMVLGDVEETVTTVEIDEETYEEIYKTTK-RSIPMLFVRGDGVILV 92
>gi|114051632|ref|NP_001040418.1| LSM Sm-like protein family member [Bombyx mori]
gi|95102812|gb|ABF51347.1| LSM Sm-like protein family member [Bombyx mori]
Length = 102
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ A+D+H NMVL + E T + + ++ K R I +F+RGD VI+V
Sbjct: 37 ELRGKLHAYDQHLNMVLGDAEETITTVEIDEETYEEVYRTTK-RTIPMLFVRGDGVILV 94
>gi|398397489|ref|XP_003852202.1| hypothetical protein MYCGRDRAFT_104520 [Zymoseptoria tritici
IPO323]
gi|339472083|gb|EGP87178.1| hypothetical protein MYCGRDRAFT_104520 [Zymoseptoria tritici
IPO323]
Length = 99
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 22 FWALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFL 81
W E + +++ G++R FD N+V++ E+ + GKG+ +A ++ R + ++ L
Sbjct: 32 IWLYEQLGIRIEGKIRGFDEFMNLVIDEA----VEVKQPGKGQTEADVKDQRRELGQILL 87
Query: 82 RGDSVIIV 89
+GD+V ++
Sbjct: 88 KGDNVCLI 95
>gi|330796969|ref|XP_003286536.1| hypothetical protein DICPUDRAFT_30992 [Dictyostelium purpureum]
gi|325083517|gb|EGC36968.1| hypothetical protein DICPUDRAFT_30992 [Dictyostelium purpureum]
Length = 97
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ A+D+H NM+L +V E + K + ++ + N R I +F+RGD VI++
Sbjct: 33 ELRGKLHAYDQHLNMILSDVEETIKVVEKDEETDEEIIR-NIKRNIKMLFIRGDGVILI 90
>gi|365991154|ref|XP_003672406.1| hypothetical protein NDAI_0J02710 [Naumovozyma dairenensis CBS
421]
gi|343771181|emb|CCD27163.1| hypothetical protein NDAI_0J02710 [Naumovozyma dairenensis CBS
421]
Length = 85
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 32 LLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
L+G ++AFD HCN+VL + E EL G + + +R +F+RGD+V ++
Sbjct: 28 LVGTLQAFDSHCNIVLSDAIETIYELDDEGDLQ------SVERNSEMIFVRGDTVTLI 79
>gi|300120504|emb|CBK20058.2| Like-Sm ribonucleoprotein, core [Blastocystis hominis]
Length = 458
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTEL---PKTGKGKKKALPVNKDRFISKMFLRGDSVI 87
++ G++ A+D+H NMV+ N +E T + P+T KK N R ++LRGD+VI
Sbjct: 395 EIRGKLLAYDQHLNMVVSNAKETQTIVTVDPETNNEVKK----NVVRNFEALYLRGDAVI 450
Query: 88 IV 89
++
Sbjct: 451 LI 452
>gi|448090794|ref|XP_004197162.1| Piso0_004401 [Millerozyma farinosa CBS 7064]
gi|448095234|ref|XP_004198193.1| Piso0_004401 [Millerozyma farinosa CBS 7064]
gi|359378584|emb|CCE84843.1| Piso0_004401 [Millerozyma farinosa CBS 7064]
gi|359379615|emb|CCE83812.1| Piso0_004401 [Millerozyma farinosa CBS 7064]
Length = 90
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 8/63 (12%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
++ GR++ +D HCNMVL + E +L G+ V K + F+RGDSVI++
Sbjct: 34 EMKGRLQGYDSHCNMVLSDAVEYIYDL---GEEVNSNPTVKKSEMV---FVRGDSVILI- 86
Query: 91 RNP 93
NP
Sbjct: 87 -NP 88
>gi|225561720|gb|EEH10000.1| U6 snRNP-associated protein Lsm3 [Ajellomyces capsulatus G186AR]
gi|240275325|gb|EER38839.1| U6 snRNP-associated protein Lsm3 [Ajellomyces capsulatus H143]
gi|325091160|gb|EGC44470.1| U6 snRNP-associated protein Lsm3 [Ajellomyces capsulatus H88]
Length = 98
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D HCN+VL +V E + + ++ + K + +F+RGDSV+++
Sbjct: 36 ELKGRLHAYDSHCNLVLGDVEETIYIVEEDESEQEVIKTIKKQEEM--LFVRGDSVVLI 92
>gi|156836424|ref|XP_001642276.1| hypothetical protein Kpol_218p3 [Vanderwaltozyma polyspora DSM
70294]
gi|156112763|gb|EDO14418.1| hypothetical protein Kpol_218p3 [Vanderwaltozyma polyspora DSM
70294]
Length = 93
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 48/82 (58%), Gaps = 9/82 (10%)
Query: 8 FSFRNSQTTLMLFCFWALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKA 67
F++ QT L FW E + +++ G++ FD N+V+++ E+ ++ KTGK K
Sbjct: 16 FNYLQQQT---LVTFWLYEQVGIRIRGKIAGFDEFMNVVIDDALEVPVDV-KTGKEK--- 68
Query: 68 LPVNKDRFISKMFLRGDSVIIV 89
+++ R + ++ L+GD++ ++
Sbjct: 69 --LDEARKLGRILLKGDNITLL 88
>gi|154283195|ref|XP_001542393.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410573|gb|EDN05961.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 98
Score = 39.3 bits (90), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D HCN+VL +V E + + ++ + K + +F+RGDSV+++
Sbjct: 36 ELRGRLHAYDSHCNLVLGDVEETIYIVEEDESEQEVIKTIKKQEEM--LFVRGDSVVLI 92
>gi|111226776|ref|XP_001134590.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
gi|121962505|sp|Q1ZXK3.1|LSM3_DICDI RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm3
gi|90970763|gb|EAS66906.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
Length = 97
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ A+D+H NM+L +V E + K + ++ + N R I +F+RGD VI++
Sbjct: 33 ELRGKLHAYDQHLNMILSDVEETIKVVEKDEETDEEIIR-NIKRNIKMLFVRGDGVILI 90
>gi|295670537|ref|XP_002795816.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226284901|gb|EEH40467.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 99
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D HCN+VL +V E + + ++ + K + +F+RGDSV+++
Sbjct: 36 ELKGRLHAYDSHCNLVLGDVEETIYIVEEDESEREMIKTIKKQEEM--LFVRGDSVVLI 92
>gi|194910032|ref|XP_001982061.1| GG11245 [Drosophila erecta]
gi|190656699|gb|EDV53931.1| GG11245 [Drosophila erecta]
Length = 176
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ AFD+H N+VL + E T + + ++ K R I +F+RGD VI+V
Sbjct: 39 ELRGRLHAFDQHLNIVLGDAEETVTTVEIDEETYEEVYKTAK-RTIPMLFVRGDGVILV 96
>gi|409099053|ref|ZP_11219077.1| hypothetical protein PagrP_11801 [Pedobacter agri PB92]
Length = 166
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 14/85 (16%)
Query: 4 IQIRFSFRNSQTTLMLFCFWALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKTGKG 63
I I+FS N+ T+ FC W F R ++ ++ LE+ +TE+P G
Sbjct: 56 INIKFSVYNNSDTVAKFCKWHTPF--------ERLSSKYLDVALED----YTEVPYQGAM 103
Query: 64 KKKALPVNKDRFISKMFLRGDSVII 88
K+ +P D + S +GDS +
Sbjct: 104 AKRVMPPPTDSYTS--LKKGDSTSV 126
>gi|393909110|gb|EJD75322.1| hypothetical protein LOAG_17508 [Loa loa]
Length = 103
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 34 GRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
GR+ AFD+H NM+L V E T + + ++ K R I +F+RGD++I+V
Sbjct: 42 GRLHAFDQHLNMILSQVEETVTTVELDEENFEEMHKQTK-RQIPMLFVRGDAIILV 96
>gi|358374818|dbj|GAA91407.1| U6 small nuclear ribonucleoprotein [Aspergillus kawachii IFO
4308]
Length = 96
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D HCN+VL +V E + + ++ + K + +F+RGDSV+++
Sbjct: 36 ELKGRLHAYDSHCNLVLGDVEETIYVVEEDENEQEILRTIKKQEEM--LFVRGDSVVLI 92
>gi|150866473|ref|XP_001386093.2| hypothetical protein PICST_63621 [Scheffersomyces stipitis CBS
6054]
gi|149387729|gb|ABN68064.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 88
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 15/84 (17%)
Query: 12 NSQTTLMLFCFWALEFIVLQL------LGRVRAFDRHCNMVLENVREMWTELPKTGKGKK 65
Q L L F EF++++L GR++ +D HCNMVL E G +
Sbjct: 9 QQQEPLDLIRFQLDEFVLVKLRGAREMKGRLQGYDSHCNMVLSEAEEYI-----YSAGDE 63
Query: 66 KALPVNKDRFISKMFLRGDSVIIV 89
+ + V K + F+RGDSVI++
Sbjct: 64 ETV-VKKTEMV---FVRGDSVILI 83
>gi|387598163|gb|AFJ91737.1| Lsm3 protein [Ostrea edulis]
Length = 103
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L +V E T + + ++ K R I +F+RGD VI+V
Sbjct: 38 ELRGRLNAYDQHLNMILGDVEETVTTVEIDEETFEEIYKSTK-RNIPMLFVRGDGVILV 95
>gi|224085111|ref|XP_002307496.1| predicted protein [Populus trichocarpa]
gi|359493111|ref|XP_002266320.2| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like isoform
1 [Vitis vinifera]
gi|222856945|gb|EEE94492.1| predicted protein [Populus trichocarpa]
Length = 97
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ A+D+H NM+L +V E+ T + + ++ + + R + +F+RGD VI+V
Sbjct: 33 ELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTR-RTVPFLFVRGDGVILV 90
>gi|224062892|ref|XP_002300922.1| predicted protein [Populus trichocarpa]
gi|222842648|gb|EEE80195.1| predicted protein [Populus trichocarpa]
Length = 97
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ A+D+H NM+L +V E+ T + + ++ + + R + +F+RGD VI+V
Sbjct: 33 ELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRATR-RTVPFLFVRGDGVILV 90
>gi|356553373|ref|XP_003545031.1| PREDICTED: small nuclear ribonucleoprotein-associated protein
B'-like [Glycine max]
Length = 281
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKD--RFISKMFLRGDSVI 87
QL+G+ AFDRH N+VL + E + +LP KGKK A +++ R + + LRG+ VI
Sbjct: 26 QLVGKFMAFDRHMNLVLGDCEE-FRKLPPA-KGKKPAEGGDREDRRTLGLVLLRGEEVI 82
>gi|156089511|ref|XP_001612162.1| LSM domain containing protein [Babesia bovis]
gi|154799416|gb|EDO08594.1| LSM domain containing protein [Babesia bovis]
Length = 89
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 39/61 (63%), Gaps = 5/61 (8%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWT--ELPKTGKGKKKALPVNKDRFISKMFLRGDSVII 88
+++G++ A+D HCNM+L + E +T EL T + + +KD + +F+RGD++I+
Sbjct: 26 EIVGQLHAYDEHCNMLLSDAIETFTSVELDPTTNQEVTTI-TSKDSGV--VFVRGDALIL 82
Query: 89 V 89
+
Sbjct: 83 L 83
>gi|395843168|ref|XP_003794368.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like
[Otolemur garnettii]
Length = 99
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L +V E T + + ++ K R I +F++GD V++V
Sbjct: 35 ELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEIYKSTK-RNIPMLFVQGDGVVLV 92
>gi|326501494|dbj|BAK02536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 121
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ A+D+H NM+L +V E+ T + + ++ + + R I +F+RGD VI+V
Sbjct: 57 ELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTR-RTIPFLFVRGDGVILV 114
>gi|330918430|ref|XP_003298219.1| hypothetical protein PTT_08854 [Pyrenophora teres f. teres 0-1]
gi|311328701|gb|EFQ93672.1| hypothetical protein PTT_08854 [Pyrenophora teres f. teres 0-1]
Length = 96
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 12 NSQTTLMLFCFWALEFIVL----QLLGRVRAFDRHCNMVLENVRE-MWTELPKTGKGKKK 66
N L+ C + + L +L GR+ A+D HCN+VL +V E ++ + + +
Sbjct: 8 NEPLDLVRLCIDEVVIVKLRGDRELKGRLHAYDSHCNLVLGDVEETIYMAEEEDDDQEPR 67
Query: 67 ALPVNKDRFISKMFLRGDSVIIV 89
V K + +F+RGDSV+++
Sbjct: 68 VRTVKKQSEM--LFVRGDSVVLI 88
>gi|303288678|ref|XP_003063627.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454695|gb|EEH52000.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 95
Score = 38.9 bits (89), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
++ G++ A+D+H NM+L +V E T + + ++ + K R + +F+RGD+V +V
Sbjct: 32 EIRGKLHAYDQHLNMILGDVEETITTVEIDDETYEEIVKTTK-RAVRYLFVRGDAVTLV 89
>gi|357494377|ref|XP_003617477.1| Small nuclear ribonucleoprotein-associated protein B [Medicago
truncatula]
gi|355518812|gb|AET00436.1| Small nuclear ribonucleoprotein-associated protein B [Medicago
truncatula]
Length = 394
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKD-RFISKMFLRGDSVI 87
QL+G+ AFDRH N+VL + E + +LP KGKK +D R + + LRG+ VI
Sbjct: 26 QLVGKFMAFDRHMNLVLGDCEE-FRKLPP-AKGKKTTDGDREDRRTLGLVLLRGEEVI 81
>gi|170588931|ref|XP_001899227.1| U6 snRNA-associated Sm-like protein LSm3 [Brugia malayi]
gi|158593440|gb|EDP32035.1| U6 snRNA-associated Sm-like protein LSm3, putative [Brugia malayi]
Length = 136
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
++ GR+ AFD+H NM+L V E T + + + + + R I +F+RGD++I+V
Sbjct: 72 EVRGRLHAFDQHLNMILSQVEETVTTV-ELDEENFEEMHKQTKRQIPMLFVRGDAIILV 129
>gi|451997874|gb|EMD90339.1| hypothetical protein COCHEDRAFT_1139604 [Cochliobolus
heterostrophus C5]
Length = 96
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 31 QLLGRVRAFDRHCNMVLENVRE-MWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D HCN+VL +V E ++ + + V K + +F+RGDSV+++
Sbjct: 31 ELKGRLHAYDSHCNLVLGDVEETIYIAEEDDDDQEPRVRTVKKQSEM--LFIRGDSVVLI 88
>gi|312074108|ref|XP_003139822.1| U6 snRNA-associated Sm-like protein LSm3 [Loa loa]
Length = 136
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
++ GR+ AFD+H NM+L V E T + + ++ K R I +F+RGD++I+V
Sbjct: 72 EVRGRLHAFDQHLNMILSQVEETVTTVELDEENFEEMHKQTK-RQIPMLFVRGDAIILV 129
>gi|303279124|ref|XP_003058855.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460015|gb|EEH57310.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 403
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 10/64 (15%)
Query: 36 VRAFDRHCNMVLENVREMWT--------ELPKTGKG--KKKALPVNKDRFISKMFLRGDS 85
V+AFD++ NM+L++VRE++T + K GK K K ++R + ++FLRG+
Sbjct: 308 VKAFDKYMNMLLQDVREIYTVRLKHRVEYVDKNGKTRYKIKHRLEGRERTMDQVFLRGEQ 367
Query: 86 VIIV 89
++ V
Sbjct: 368 IVTV 371
>gi|452980005|gb|EME79767.1| hypothetical protein MYCFIDRAFT_81234 [Pseudocercospora fijiensis
CIRAD86]
Length = 100
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 22 FWALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFL 81
W E + +++ G++R FD N+V+++ E+ + GKG+ + ++ R + ++ L
Sbjct: 33 IWLYEQLGIRIEGKIRGFDEFMNLVIDDA----VEVKQPGKGETEEDVKDQRREVGQILL 88
Query: 82 RGDSVIIV 89
+GD+V ++
Sbjct: 89 KGDNVCLI 96
>gi|440637312|gb|ELR07231.1| hypothetical protein GMDG_02458 [Geomyces destructans 20631-21]
Length = 98
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D HCN+VL +V E + + + + ++K + +F+RGDSV+++
Sbjct: 36 ELKGRLHAYDSHCNLVLGDVVETVYVVDEDDEDGETLKTIHKKSEM--LFVRGDSVVLI 92
>gi|348682103|gb|EGZ21919.1| hypothetical protein PHYSODRAFT_285678 [Phytophthora sojae]
Length = 92
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G ++A+D+H NMVL +V E T + + + L R I +F+RGD VI+V
Sbjct: 28 ELRGVLQAYDQHLNMVLSDVEETIT-VQELDPETYEELIKQSKRTIEMLFVRGDVVILV 85
>gi|384247810|gb|EIE21296.1| hypothetical protein COCSUDRAFT_83520 [Coccomyxa subellipsoidea
C-169]
Length = 270
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVI 87
++GR AFDRH N+VL + E PK G+ +++ ++ R + + LRGD VI
Sbjct: 26 HIVGRFMAFDRHMNLVLGDAEEFRKLPPKKGRTEEE---RDQRRVLGLVLLRGDEVI 79
>gi|301106621|ref|XP_002902393.1| U6 snRNA-associated Sm-like protein LSm3, putative [Phytophthora
infestans T30-4]
gi|262098267|gb|EEY56319.1| U6 snRNA-associated Sm-like protein LSm3, putative [Phytophthora
infestans T30-4]
Length = 92
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWT--EL-PKTGKGKKKALPVNKDRFISKMFLRGDSVI 87
+L G ++A+D+H NMVL +V E T EL P+T + L R I +F+RGD VI
Sbjct: 28 ELRGVLQAYDQHLNMVLSDVEETITVQELDPET----YEELIKQSKRTIEMLFVRGDVVI 83
Query: 88 IV 89
+V
Sbjct: 84 LV 85
>gi|156083891|ref|XP_001609429.1| small nuclear ribonucleoprotein E [Babesia bovis T2Bo]
gi|154796680|gb|EDO05861.1| small nuclear ribonucleoprotein E, putative [Babesia bovis]
Length = 89
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 16/86 (18%)
Query: 8 FSFRNSQTTLMLFCFWALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKA 67
F F S T + + W + L++ G++R FD + NMVLE+V E++ + K +++A
Sbjct: 20 FRFFTSGTRVQI---WLYDQPNLKIEGKIRGFDEYMNMVLEDVEELYVK-----KQERRA 71
Query: 68 LPVNKDRFISKMFLRGDSVIIVLRNP 93
L + L+GD++ ++ P
Sbjct: 72 L--------GTILLKGDAMALITAAP 89
>gi|328872794|gb|EGG21161.1| LSM domain-containing protein [Dictyostelium fasciculatum]
Length = 97
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ A+D+H NM+L +V E + K + ++ + K R I +F+RGD VI++
Sbjct: 33 ELRGKLHAYDQHLNMILSDVEETIRVVEKDEETDEEIVKSIK-RKIKMLFVRGDGVILI 90
>gi|449497088|ref|XP_004160308.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like [Cucumis
sativus]
Length = 97
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ A+D+H NM+L +V E T + + ++ + ++ R + +F+RGD VI+V
Sbjct: 33 ELRGKLHAYDQHLNMILGDVEESVTTVEIDDETYEEIVRTSR-RTVPFLFVRGDGVILV 90
>gi|452823867|gb|EME30874.1| U6 snRNA-associated Sm-like protein LSm3 [Galdieria sulphuraria]
Length = 90
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 7/62 (11%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELP---KTGKGKKKALPVNKDRFISKMFLRGDSVI 87
+L G+++AFD+H N+VL +V E ++ +TG+ KA+ R + +F+RGD VI
Sbjct: 26 ELRGKLQAFDQHMNLVLSDVEETALKVEVDDETGEELIKAVK----RKMPMLFVRGDGVI 81
Query: 88 IV 89
+V
Sbjct: 82 LV 83
>gi|327356944|gb|EGE85801.1| GTP-binding protein AGP-1 [Ajellomyces dermatitidis ATCC 18188]
Length = 98
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D HCN+VL +V E + + ++ + K + +F+RGDSV+++
Sbjct: 36 ELKGRLHAYDSHCNLVLGDVEETIYIVEEDESEQEIIKTIKKQEEM--LFVRGDSVVLI 92
>gi|296423190|ref|XP_002841138.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637372|emb|CAZ85329.1| unnamed protein product [Tuber melanosporum]
Length = 95
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 31 QLLGRVRAFDRHCNMVLENVRE-MWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D HCN+VL +V E ++T G ++ + +F+RGDSV+++
Sbjct: 34 ELRGRLHAYDSHCNLVLGDVEETIYT----VGDDEEDDSVKTIKKQSEMLFVRGDSVVLI 89
>gi|451847192|gb|EMD60500.1| hypothetical protein COCSADRAFT_40145 [Cochliobolus sativus
ND90Pr]
Length = 96
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 13/86 (15%)
Query: 12 NSQTTLMLFCFWALEFIVL----QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKA 67
N L+ C + + L +L GR+ A+D HCN+VL +V E + ++
Sbjct: 8 NEPLDLVRLCIDEIVIVKLRGDRELKGRLHAYDSHCNLVLGDVEETIYLAEEDDDDQEPR 67
Query: 68 LPVNKDRFISK----MFLRGDSVIIV 89
+ R I K +F+RGDSV+++
Sbjct: 68 V-----RTIKKQSEMLFIRGDSVVLI 88
>gi|390596776|gb|EIN06177.1| Sm-like ribonucleo protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 158
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 32 LLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNK-DRFISKMFLRGDSVI 87
L G++ AFDRH N+VL E PK G+ +A PV + R + + LRG++V+
Sbjct: 19 LTGQMLAFDRHMNLVLAECEEFRRVRPKKKPGETEAGPVQEMKRSLGLVILRGETVV 75
>gi|66804949|ref|XP_636207.1| hypothetical protein DDB_G0289453 [Dictyostelium discoideum AX4]
gi|74852215|sp|Q54HH8.1|SMDL_DICDI RecName: Full=Small nuclear ribonucleoprotein Sm D-like protein
gi|60464569|gb|EAL62706.1| hypothetical protein DDB_G0289453 [Dictyostelium discoideum AX4]
Length = 257
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 34 GRVRAFDRHCNMVLENVREMWT---ELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
G + AFD+H N++L +V E + LP T + P K R+ ++F++GD+V+ V+
Sbjct: 196 GYIIAFDKHMNIILRDVEEEYDLLKSLPSTRNQNQPIQPKIK-RYYGQLFIKGDTVVSVI 254
>gi|167375897|ref|XP_001733767.1| snrnp sm protein [Entamoeba dispar SAW760]
gi|165904941|gb|EDR30063.1| snrnp sm protein, putative [Entamoeba dispar SAW760]
Length = 99
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 15/59 (25%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++RAFD+H N++L +V E + E K + PV +++RGD V+++
Sbjct: 51 KLKGKLRAFDQHLNIILTDVNETYQE-------KTRTFPV--------LYVRGDLVVLI 94
>gi|449446417|ref|XP_004140968.1| PREDICTED: LOW QUALITY PROTEIN: U6 snRNA-associated Sm-like
protein LSm3-like [Cucumis sativus]
Length = 101
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ A+D+H NM+L +V E T + + ++ + ++ R + +F+RGD VI+V
Sbjct: 37 ELRGKLHAYDQHLNMILGDVEESVTTVEIDDETYEEIVRTSR-RTVPFLFVRGDGVILV 94
>gi|453087554|gb|EMF15595.1| Sm-like ribonucleo protein [Mycosphaerella populorum SO2202]
Length = 95
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 10/62 (16%)
Query: 31 QLLGRVRAFDRHCNMVLENVRE---MWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVI 87
+L GR+ A+D HCN+VL +V E +W + + + V K + +F+RGDSV+
Sbjct: 36 ELAGRLHAYDSHCNLVLGDVTETVYVWDD-----EDEDNVRAVKKQSEM--LFVRGDSVV 88
Query: 88 IV 89
++
Sbjct: 89 LI 90
>gi|168011312|ref|XP_001758347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690382|gb|EDQ76749.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 152
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 15 TTLMLFCFWALEFIVL---QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKK 66
+ L+L+ W + + QL+G+ AFDRH N+VL + E+ PK GK +++
Sbjct: 7 SKLLLYINWRIRVTIQDGRQLVGKFMAFDRHMNLVLGDCEELRRVPPKKGKSQEE 61
>gi|366996280|ref|XP_003677903.1| hypothetical protein NCAS_0H02460 [Naumovozyma castellii CBS
4309]
gi|342303773|emb|CCC71556.1| hypothetical protein NCAS_0H02460 [Naumovozyma castellii CBS
4309]
Length = 92
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 8 FSFRNSQTTLMLFCFWALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKA 67
F+F QTT+ FW E + ++ G+V FD N+V+++ E+ + KTGK
Sbjct: 16 FNFLQQQTTV---TFWLFEQVGTRIRGKVSGFDEFMNVVIDDAIEIPVD-AKTGKEL--- 68
Query: 68 LPVNKDRFISKMFLRGDSVIIV 89
V+K + ++ L+GD++ ++
Sbjct: 69 --VSKGTKLGRILLKGDNITLI 88
>gi|253744911|gb|EET01046.1| Small nuclear ribonucleoprotein Sm D2, putative [Giardia
intestinalis ATCC 50581]
Length = 83
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 11/61 (18%)
Query: 32 LLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLR 91
+ G ++A+DRH N+V E W E K KK+ LRGD+VI+V+
Sbjct: 33 IAGVLKAYDRHLNLVFSEATETWEENGIEYKEDKKSF-----------MLRGDNVIMVVS 81
Query: 92 N 92
N
Sbjct: 82 N 82
>gi|71030066|ref|XP_764675.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351631|gb|EAN32392.1| Sm protein, putative [Theileria parva]
Length = 84
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWT--ELPKTGKGKKKAL 68
+L+GR++AFD HCNMVL V E T EL K + L
Sbjct: 31 ELVGRLQAFDEHCNMVLSEVTETITTVELDNNSKNETTKL 70
>gi|290462981|gb|ADD24538.1| U6 snRNA-associated Sm-like protein LSm3 [Lepeophtheirus
salmonis]
Length = 105
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D++ NM+L V E T + + ++ K R I +F+RGD VI+V
Sbjct: 40 ELKGRLNAYDQYLNMILGEVEETVTSIEIDEETYEEVYRTTK-RNIPMLFVRGDGVILV 97
>gi|398407923|ref|XP_003855427.1| hypothetical protein MYCGRDRAFT_84746 [Zymoseptoria tritici
IPO323]
gi|339475311|gb|EGP90403.1| hypothetical protein MYCGRDRAFT_84746 [Zymoseptoria tritici
IPO323]
Length = 94
Score = 38.1 bits (87), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D HCN+VL +V E + + + + + + +F+RGDSV+++
Sbjct: 36 ELQGRLHAYDSHCNLVLGDVTETVYVVDEEDEDNVRTVK----KQSEMLFVRGDSVVLI 90
>gi|255087196|ref|XP_002505521.1| predicted protein [Micromonas sp. RCC299]
gi|226520791|gb|ACO66779.1| predicted protein [Micromonas sp. RCC299]
Length = 95
Score = 38.1 bits (87), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
++ G++ A+D+H NM+L +V E T + + ++ + K R + +F+RGD+V +V
Sbjct: 32 EIRGKLHAYDQHLNMILGDVEETITTVEIDDETYEEIIKTTK-RAVRFLFVRGDAVTLV 89
>gi|444320755|ref|XP_004181034.1| hypothetical protein TBLA_0E04630 [Tetrapisispora blattae CBS
6284]
gi|387514077|emb|CCH61515.1| hypothetical protein TBLA_0E04630 [Tetrapisispora blattae CBS
6284]
Length = 82
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 7/59 (11%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G ++AFD HCN+VL + E EL G+ K+ N + +F+RGDSV ++
Sbjct: 27 ELSGILQAFDSHCNIVLSDAIETKYELV---DGELKSTERNSEM----LFVRGDSVTLI 78
>gi|332262690|ref|XP_003280392.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like
[Nomascus leucogenys]
Length = 102
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L +V E T + +T + + + + R I +F+ GD V++V
Sbjct: 38 ELRGRLHAYDQHLNMILGDVEETVTTI-ETDEETYEEIYKSTKRNIPMLFVWGDGVVLV 95
>gi|326516156|dbj|BAJ88101.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 123
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 38 AFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
A+D+H NM+L +V E+ T + + ++ + +K R I +F+RGD VI+V
Sbjct: 66 AYDQHLNMILGDVEEIVTSIEIDDETYEEIVRTSK-RTIPYLFVRGDGVILV 116
>gi|452845306|gb|EME47239.1| hypothetical protein DOTSEDRAFT_124864 [Dothistroma septosporum
NZE10]
Length = 95
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D HCN+VL +V E + + + ++ V K + +F+RGDSV+++
Sbjct: 36 ELQGRLHAYDSHCNLVLGDVSETVYVVDEEDE-QENVRTVKKQSEM--LFVRGDSVVLI 91
>gi|430813791|emb|CCJ28894.1| unnamed protein product [Pneumocystis jirovecii]
Length = 92
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 16/82 (19%)
Query: 8 FSFRNSQTTLMLFCFWALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKA 67
F TT+ C W E +++ G++R FD N+V++ E+ G+KK
Sbjct: 22 FKLLQQHTTV---CIWLYEQTEMKIEGKIRGFDEFMNLVIDEAVEI---------GQKK- 68
Query: 68 LPVNKDRFISKMFLRGDSVIIV 89
N R + ++ L+GD++ ++
Sbjct: 69 ---NSSRSLGRILLKGDNITLI 87
>gi|388582050|gb|EIM22356.1| Sm-like ribonucleo protein [Wallemia sebi CBS 633.66]
Length = 89
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 47/86 (54%), Gaps = 13/86 (15%)
Query: 4 IQIRFSFRNSQTTLMLFCFWALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKTGKG 63
I + F + +T + + W + + +L GR+ FD + N++L++V E++ G
Sbjct: 13 INVIFKYLQQRTKIQI---WLYDNVDCRLEGRIIGFDEYMNVILDDVEEVFY-------G 62
Query: 64 KKKALPVNKDRFISKMFLRGDSVIIV 89
KK++ P N + ++ L+GD++ ++
Sbjct: 63 KKQSQPRNS---LGRILLKGDNITLI 85
>gi|302309894|ref|XP_002999599.1| hypothetical protein [Candida glabrata CBS 138]
gi|196049204|emb|CAR58072.1| unnamed protein product [Candida glabrata]
Length = 85
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 7/56 (12%)
Query: 34 GRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
G ++AFD HCN+VL + E EL G+ K+ ++R +F+RGDSV ++
Sbjct: 30 GVLQAFDSHCNIVLSDAVETIYELV---DGELKS----QERASEMIFVRGDSVTLI 78
>gi|325183158|emb|CCA17616.1| U6 snRNAassociated Smlike protein LSm3 putative [Albugo laibachii
Nc14]
Length = 92
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G + A+D+H NMVL V E T + + + + + R + +F+RGD+VI+V
Sbjct: 28 ELRGLLHAYDQHLNMVLSEVEETVT-VQELDEETYEEIIKQSKRQVEMLFIRGDAVILV 85
>gi|255714250|ref|XP_002553407.1| KLTH0D16082p [Lachancea thermotolerans]
gi|238934787|emb|CAR22969.1| KLTH0D16082p [Lachancea thermotolerans CBS 6340]
Length = 81
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
++ G ++AFD HCN+VL N E EL G+ K+ + +F+RGDSV ++
Sbjct: 25 EMTGVLQAFDSHCNIVLSNATETIYELV---DGELKS----STKGSEMVFVRGDSVTLI 76
>gi|254579134|ref|XP_002495553.1| ZYRO0B14102p [Zygosaccharomyces rouxii]
gi|238938443|emb|CAR26620.1| ZYRO0B14102p [Zygosaccharomyces rouxii]
Length = 85
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 7/59 (11%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G ++AFD HCN+VL + E EL G+ K+ ++ +F+RGDSV ++
Sbjct: 27 ELTGTLQAFDSHCNIVLSDAVESIYELV---DGELKS----TEKSSEMVFVRGDSVTLI 78
>gi|50303649|ref|XP_451766.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640898|emb|CAH02159.1| KLLA0B05203p [Kluyveromyces lactis]
Length = 83
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 7/59 (11%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L+G ++AFD HCN+VL + +E EL +G K +RF +F+RG V +V
Sbjct: 26 ELVGTLQAFDSHCNIVLSDSKETIYELV---EGDLKT----TERFSEMIFVRGGLVALV 77
>gi|440294421|gb|ELP87438.1| snrnp sm protein, putative [Entamoeba invadens IP1]
Length = 79
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 15/59 (25%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
QL G++RAFD+H N+VL V E + + + PV +++RGD V+IV
Sbjct: 30 QLKGKLRAFDQHLNLVLTEVTETYNSV-------SRDFPV--------LYIRGDLVVIV 73
>gi|344303705|gb|EGW33954.1| hypothetical protein SPAPADRAFT_59353 [Spathaspora passalidarum
NRRL Y-27907]
Length = 80
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 17/83 (20%)
Query: 14 QTTLMLFCFWALEFIVLQL------LGRVRAFDRHCNMVLENVRE-MWTELPKTGKGKKK 66
+ L L F EF++++L G+++ +D HCNMVL E ++ + + KK
Sbjct: 5 EEPLDLIRFHLDEFVLIKLRGAREIKGKLQGYDSHCNMVLSEAEEYIYNDSNDDVETKKT 64
Query: 67 ALPVNKDRFISKMFLRGDSVIIV 89
+ +F+RGDSVI++
Sbjct: 65 EM----------VFVRGDSVILI 77
>gi|307105891|gb|EFN54138.1| hypothetical protein CHLNCDRAFT_135527 [Chlorella variabilis]
Length = 159
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVI 87
Q++GR AFDRH N+VL + E PK G ++ + R + + LRGD V+
Sbjct: 25 QIVGRFMAFDRHMNLVLGDAEEFRKLPPKKGVAEEDR---EQRRVLGLVILRGDEVV 78
>gi|156097859|ref|XP_001614962.1| U6 snRNA-associated Sm-like protein LSm3 [Plasmodium vivax Sal-1]
gi|148803836|gb|EDL45235.1| U6 snRNA-associated Sm-like protein LSm3, putative [Plasmodium
vivax]
Length = 91
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNK-DRFISKMFLRGDSVIIV 89
++ G++ A+D H NM+L N E + K + V K +R + +F+RGDS+I+V
Sbjct: 31 EIRGKLDAYDNHLNMILSNAHETY----KQSVVENDEESVKKIERNLDMVFVRGDSIILV 86
>gi|168061084|ref|XP_001782521.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168061116|ref|XP_001782537.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168066445|ref|XP_001785148.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663270|gb|EDQ50044.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666006|gb|EDQ52673.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666022|gb|EDQ52689.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 145
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 15 TTLMLFCFWALEFIVL---QLLGRVRAFDRHCNMVLENVREMWTELPKTGK 62
+ L+L+ W + + QL+G+ AFDRH N+VL + E+ PK GK
Sbjct: 7 SKLLLYINWRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEELRRVPPKKGK 57
>gi|156841174|ref|XP_001643962.1| hypothetical protein Kpol_1001p16 [Vanderwaltozyma polyspora DSM
70294]
gi|156114593|gb|EDO16104.1| hypothetical protein Kpol_1001p16 [Vanderwaltozyma polyspora DSM
70294]
Length = 85
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 7/59 (11%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L+G ++AFD HCN+VL + E EL G+ K+ ++ +F+RGD+V ++
Sbjct: 27 ELVGILQAFDSHCNIVLSDAVETIYELV---DGELKS----NEKTSEMLFVRGDTVTLI 78
>gi|452987088|gb|EME86844.1| hypothetical protein MYCFIDRAFT_49442 [Pseudocercospora fijiensis
CIRAD86]
Length = 94
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D HCN+VL +V E + + + + + + +F+RGDSV+++
Sbjct: 36 ELQGRLHAYDSHCNLVLGDVTETVYLVDEEDEDNVRTVK----KQSEMLFVRGDSVVLI 90
>gi|224011054|ref|XP_002294484.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220969979|gb|EED88318.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 90
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNK-DRFISKMFLRGDSVIIV 89
+L G++ AFD+H NMVL +V E T + + ++ VNK R + +F+RGD V++V
Sbjct: 26 ELRGKLHAFDQHLNMVLSDVEETITSTEEDDETGEEI--VNKRTRSVGMLFVRGDIVVLV 83
>gi|392576848|gb|EIW69978.1| hypothetical protein TREMEDRAFT_68409 [Tremella mesenterica DSM
1558]
Length = 95
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 32 LLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVII 88
L G + A+D H N+VL V E + G+ A P + R +F+RGDSVI+
Sbjct: 34 LTGNLHAYDAHMNLVLSQVEE-NIHIVDVGEDGTAAPPRIERRGFEMLFIRGDSVIL 89
>gi|367026602|ref|XP_003662585.1| hypothetical protein MYCTH_2303370 [Myceliophthora thermophila
ATCC 42464]
gi|347009854|gb|AEO57340.1| hypothetical protein MYCTH_2303370 [Myceliophthora thermophila
ATCC 42464]
Length = 96
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D HCN+VL +V E + K + + +F+RGDSV+++
Sbjct: 35 ELKGRLHAYDSHCNLVLGDVEETIYVVDDEDDEDVKTVSKKSE----MLFVRGDSVVLI 89
>gi|429964879|gb|ELA46877.1| hypothetical protein VCUG_01651 [Vavraia culicis 'floridensis']
Length = 92
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G VR D H NM+L +V E+ K KG KK +R I + LRGD+VI V
Sbjct: 32 KLCGIVRVIDHHFNMILTDVTEIRKTKSK-NKGVKKREGTTVERKIKCLVLRGDNVISV 89
>gi|354548424|emb|CCE45160.1| hypothetical protein CPAR2_701720 [Candida parapsilosis]
Length = 90
Score = 37.4 bits (85), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 14/90 (15%)
Query: 6 IRFSFRNSQTTLMLFCFWALEFIVLQL------LGRVRAFDRHCNMVLENVREMWTELPK 59
++ + Q L L F E+++++L G+++ +D HCN+VL + E
Sbjct: 4 VQTEHKQQQEPLDLIRFQLDEYVIVKLRGAREFKGKLQGYDSHCNLVLSDATETIF---- 59
Query: 60 TGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
K P+ K +F+RGDSVI++
Sbjct: 60 --SDKDGVEPIIK--RTEMVFVRGDSVILI 85
>gi|209879574|ref|XP_002141227.1| LSM domain-containing protein [Cryptosporidium muris RN66]
gi|209556833|gb|EEA06878.1| LSM domain-containing protein [Cryptosporidium muris RN66]
Length = 106
Score = 37.4 bits (85), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELP-KTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G + A+D H NMVL NV+E ++ G++ + V R I +FLRGD VI+V
Sbjct: 38 ELEGILYAYDPHMNMVLGNVKETSQKITIDEVTGEESTMKVT--RRIEMLFLRGDLVILV 95
>gi|212533023|ref|XP_002146668.1| U6 small nuclear ribonucleoprotein (Lsm3), putative [Talaromyces
marneffei ATCC 18224]
gi|210072032|gb|EEA26121.1| U6 small nuclear ribonucleoprotein (Lsm3), putative [Talaromyces
marneffei ATCC 18224]
Length = 96
Score = 37.4 bits (85), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D HCN+VL +V E + + ++ + K + +F+RGDSV+++
Sbjct: 35 ELKGRLHAYDSHCNLVLGDVEETIYVVEEDENEEETVKTIRKQEEM--LFVRGDSVVLI 91
>gi|224117856|ref|XP_002317685.1| predicted protein [Populus trichocarpa]
gi|222860750|gb|EEE98297.1| predicted protein [Populus trichocarpa]
Length = 250
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVI 87
QL+G+ AFDRH N+VL + E + +LP KGKK R + + LRG+ VI
Sbjct: 26 QLVGKFMAFDRHMNLVLGDCEE-FRKLPPA-KGKKNNEEREDRRTLGLVLLRGEEVI 80
>gi|260947516|ref|XP_002618055.1| hypothetical protein CLUG_01514 [Clavispora lusitaniae ATCC 42720]
gi|238847927|gb|EEQ37391.1| hypothetical protein CLUG_01514 [Clavispora lusitaniae ATCC 42720]
Length = 130
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 11/60 (18%)
Query: 31 QLLGRVRAFDRHCNMVLENVRE-MWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
++ G+++ +D HCNMVL + +E ++ E + KK + +F+RGDSVI++
Sbjct: 76 EMKGKLQGYDSHCNMVLSDAQETIYGENEEDTVVKKTEM----------VFVRGDSVILI 125
>gi|242777144|ref|XP_002478974.1| U6 small nuclear ribonucleoprotein (Lsm3), putative [Talaromyces
stipitatus ATCC 10500]
gi|218722593|gb|EED22011.1| U6 small nuclear ribonucleoprotein (Lsm3), putative [Talaromyces
stipitatus ATCC 10500]
Length = 96
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D HCN+VL +V E + + ++ + K + +F+RGDSV+++
Sbjct: 35 ELKGRLHAYDSHCNLVLGDVEETIYVVEEDENEEETVKTIRKQEEM--LFVRGDSVVLI 91
>gi|355561171|gb|EHH17857.1| hypothetical protein EGK_14338 [Macaca mulatta]
Length = 102
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D++ NM+L +V E T + + ++ K R I +F+RGD V++V
Sbjct: 38 ELRGRLHAYDQYSNMILGDVEETVTTIEIDEETYEEIYKSMK-RNIPMLFVRGDGVVLV 95
>gi|357126031|ref|XP_003564692.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like isoform 2
[Brachypodium distachyon]
Length = 114
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 24 ALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRG 83
A + L +L + A+D+H NM+L +V E+ T + + ++ + + R I +F+RG
Sbjct: 43 ASSYFCLLILNLLMAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTR-RTIPFLFVRG 101
Query: 84 DSVIIV 89
D VI+V
Sbjct: 102 DGVILV 107
>gi|406602048|emb|CCH46368.1| hypothetical protein BN7_5961 [Wickerhamomyces ciferrii]
Length = 77
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 29 VLQLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVII 88
+++LL +A+D HCN+VL + E ++ + G + K+ N + +F+RGDSVI+
Sbjct: 16 LIRLLLDEQAYDSHCNIVLSDAIETIYDIEE-GSDELKSTTKNSEI----LFVRGDSVIL 70
Query: 89 V 89
+
Sbjct: 71 I 71
>gi|169614602|ref|XP_001800717.1| hypothetical protein SNOG_10447 [Phaeosphaeria nodorum SN15]
gi|160702780|gb|EAT81841.2| hypothetical protein SNOG_10447 [Phaeosphaeria nodorum SN15]
Length = 96
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 17/67 (25%)
Query: 31 QLLGRVRAFDRHCNMVLENVREM--------WTELPKTGKGKKKALPVNKDRFISKMFLR 82
+L GR+ A+D HCN+VL +V E + P+ KK++ +F+R
Sbjct: 31 ELKGRLHAYDSHCNLVLGDVEETIFVAEEEEEDQEPRVRTVKKQS---------EMLFVR 81
Query: 83 GDSVIIV 89
GDSV+++
Sbjct: 82 GDSVVLI 88
>gi|171680906|ref|XP_001905397.1| hypothetical protein [Podospora anserina S mat+]
gi|170940411|emb|CAP65637.1| unnamed protein product [Podospora anserina S mat+]
Length = 97
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 31 QLLGRVRAFDRHCNMVLENVRE-MWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D HCN+VL +V E ++ + + K + R +F+RGDSV+++
Sbjct: 35 ELKGRLHAYDSHCNLVLGDVEETIYVVEDEENDEEVKTIS----RKSEMLFVRGDSVVLI 90
>gi|115387369|ref|XP_001211190.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195274|gb|EAU36974.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 97
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D HCN+VL +V E + ++ + K + +F+RGDSV+++
Sbjct: 37 ELKGRLHAYDSHCNLVLGDVEETIYVVEDDENEEETIRTIKKQEEM--LFVRGDSVVLI 93
>gi|388580102|gb|EIM20419.1| like-Sm ribonucleo protein [Wallemia sebi CBS 633.66]
Length = 89
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 15/69 (21%)
Query: 31 QLLGRVRAFDRHCNMVLENVREM-------WTELPKTGKGKKKALPVNKDRFISKMFLRG 83
+L+G + A+D H N++L NV E T L T + K+++P+ +++RG
Sbjct: 29 ELIGVLHAYDSHMNLILGNVDEFVTVVDVDSTTLESTTRFVKRSMPM--------LYIRG 80
Query: 84 DSVIIVLRN 92
D VI++ N
Sbjct: 81 DGVILISPN 89
>gi|71417383|ref|XP_810555.1| small nuclear ribonucleoprotein SmD2 [Trypanosoma cruzi strain CL
Brener]
gi|70875103|gb|EAN88704.1| small nuclear ribonucleoprotein SmD2, putative [Trypanosoma cruzi]
Length = 111
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 11/63 (17%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
L+ V AFD+H N+VL +V EL K +K +R I MFLRG SV+ ++
Sbjct: 56 SLVATVVAFDKHFNLVLRDV----VELAMVNKQQK-------ERSIRNMFLRGGSVVFIV 104
Query: 91 RNP 93
+ P
Sbjct: 105 KLP 107
>gi|255578051|ref|XP_002529896.1| small nuclear ribonucleoprotein-associated protein, putative
[Ricinus communis]
gi|223530623|gb|EEF32499.1| small nuclear ribonucleoprotein-associated protein, putative
[Ricinus communis]
Length = 275
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVI 87
QL+G+ AFDRH N+VL + E + +LP KGKK R + + LRG+ VI
Sbjct: 26 QLVGKFMAFDRHMNLVLGDCEE-FRKLPPA-KGKKNNEEREDRRTLGLVLLRGEEVI 80
>gi|170105048|ref|XP_001883737.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164641372|gb|EDR05633.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 103
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 32 LLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVI 87
L G++ AFDRH N+VL + E PK G++ A R + + LRG++V+
Sbjct: 19 LTGQMLAFDRHMNLVLADCEEFRRVRPKKKAGEETAPEQEMKRTLGLVILRGETVV 74
>gi|255578055|ref|XP_002529898.1| small nuclear ribonucleoprotein-associated protein, putative
[Ricinus communis]
gi|223530625|gb|EEF32501.1| small nuclear ribonucleoprotein-associated protein, putative
[Ricinus communis]
Length = 275
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVI 87
QL+G+ AFDRH N+VL + E + +LP KGKK R + + LRG+ VI
Sbjct: 26 QLVGKFMAFDRHMNLVLGDCEE-FRKLPPA-KGKKNNEEREDRRTLGLVLLRGEEVI 80
>gi|21536707|gb|AAM61039.1| putative snRNP protein [Arabidopsis thaliana]
Length = 254
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVI 87
QL+G+ AFDRH N+VL + E + +LP KK + + R + + LRG+ VI
Sbjct: 26 QLIGKFMAFDRHMNLVLGDCEE-FRKLPPAKGNKKTSEEREERRTLGLVLLRGEEVI 81
>gi|71406106|ref|XP_805619.1| small nuclear ribonucleoprotein SmD2 [Trypanosoma cruzi strain CL
Brener]
gi|70869094|gb|EAN83768.1| small nuclear ribonucleoprotein SmD2, putative [Trypanosoma cruzi]
Length = 111
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 11/63 (17%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
L+ V AFD+H N+VL +V EL K +K +R I MFLRG SV+ ++
Sbjct: 56 SLVATVVAFDKHFNLVLRDV----VELAMVNKEQK-------ERSIRNMFLRGGSVVFIV 104
Query: 91 RNP 93
+ P
Sbjct: 105 KLP 107
>gi|109068881|ref|XP_001099845.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm3 [Macaca
mulatta]
gi|355748132|gb|EHH52629.1| hypothetical protein EGM_13096 [Macaca fascicularis]
Length = 102
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D++ NM+L +V E T + + ++ K R I +F RGD V++V
Sbjct: 38 ELRGRLHAYDQYSNMILGDVEETVTTIEIDEETYEEIYKSMK-RNIPMLFFRGDGVVLV 95
>gi|449547896|gb|EMD38863.1| hypothetical protein CERSUDRAFT_112585 [Ceriporiopsis
subvermispora B]
Length = 184
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 33 LGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNK-DRFISKMFLRGDSVI 87
+G++ AFDRH N+VL E PK G+ +A PV + R + + LRG++V+
Sbjct: 30 VGQMLAFDRHMNLVLAECEEFRRIRPKKKPGETEAGPVQEMKRTLGLVILRGETVV 85
>gi|346975981|gb|EGY19433.1| hypothetical protein VDAG_09635 [Verticillium dahliae VdLs.17]
Length = 96
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 31 QLLGRVRAFDRHCNMVLENVRE-MWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D HCN+VL +V E ++ + + K + R +F+RGDSV+++
Sbjct: 35 ELKGRLHAYDSHCNIVLGDVEETIYVVDEDDDEEEAKTIS----RKSEMLFVRGDSVVLI 90
>gi|310789782|gb|EFQ25315.1| LSM domain-containing protein [Glomerella graminicola M1.001]
Length = 96
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 31 QLLGRVRAFDRHCNMVLENVRE-MWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D HCN+VL V E ++ + K + R +F+RGDSV+++
Sbjct: 35 ELKGRLHAYDSHCNLVLGEVEETIYVVDEDEEDEEVKTIS----RKSEMLFVRGDSVVLI 90
>gi|290992103|ref|XP_002678674.1| predicted protein [Naegleria gruberi]
gi|284092287|gb|EFC45930.1| predicted protein [Naegleria gruberi]
Length = 83
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVI-IV 89
Q++G+ AFD+ N+V+ + E +PK KG++ V + R + + +RG+++I IV
Sbjct: 22 QIVGKFMAFDKFMNLVVADCEEFRKIIPKGSKGEE----VEQKRSLGFLLIRGENIISIV 77
Query: 90 LRNP 93
+ P
Sbjct: 78 VEGP 81
>gi|396485483|ref|XP_003842182.1| similar to U6 snRNA-associated Sm-like protein LSm3
[Leptosphaeria maculans JN3]
gi|312218758|emb|CBX98703.1| similar to U6 snRNA-associated Sm-like protein LSm3
[Leptosphaeria maculans JN3]
Length = 96
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 12 NSQTTLMLFCFWALEFIVL----QLLGRVRAFDRHCNMVLENVRE-MWTELPKTGKGKKK 66
N L+ C + + L +L GR+ A+D HCN+VL +V E ++ + + +
Sbjct: 8 NEPLDLVRLCIDEIVIVKLRGDRELKGRLHAYDSHCNLVLGDVEETIFVADEEEEDLEPR 67
Query: 67 ALPVNKDRFISKMFLRGDSVIIV 89
V K + +F+RGDSV+++
Sbjct: 68 VRTVKKQSEM--LFVRGDSVVLI 88
>gi|409040887|gb|EKM50373.1| hypothetical protein PHACADRAFT_104351 [Phanerochaete carnosa
HHB-10118-sp]
Length = 105
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 33 LGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNK-DRFISKMFLRGDSVI 87
+G++ AFDRH N+VL E PK G+ +A P + R + + LRG++V+
Sbjct: 20 VGQMLAFDRHMNLVLAECEEFRRVRPKKKSGETEAGPAQEMKRTLGLVILRGETVV 75
>gi|297799992|ref|XP_002867880.1| hypothetical protein ARALYDRAFT_492815 [Arabidopsis lyrata subsp.
lyrata]
gi|297313716|gb|EFH44139.1| hypothetical protein ARALYDRAFT_492815 [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 10/61 (16%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKD----RFISKMFLRGDSV 86
QL+G+ AFDRH N+VL + E + +LP KGKK +N++ R + + LRG+ V
Sbjct: 26 QLVGKFMAFDRHMNLVLGDCEE-FRKLPPA-KGKK----INEEREDRRTLGLVLLRGEEV 79
Query: 87 I 87
I
Sbjct: 80 I 80
>gi|328858783|gb|EGG07894.1| hypothetical protein MELLADRAFT_35186 [Melampsora larici-populina
98AG31]
Length = 95
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWT--ELPKTGKGKKKALPVNKDRFISKMFLRGDSVII 88
++ G + A+D H NMVL +V E T E+P++ ++ + + K R +F+RGD V++
Sbjct: 21 EVTGTLHAYDGHMNMVLSDVTESITIVEVPES-PNQEPTIRIVK-RNCEMLFVRGDGVVL 78
Query: 89 VL 90
V+
Sbjct: 79 VI 80
>gi|159111944|ref|XP_001706202.1| Small nuclear ribonucleoprotein Sm D2, putative [Giardia lamblia
ATCC 50803]
gi|157434296|gb|EDO78528.1| Small nuclear ribonucleoprotein Sm D2, putative [Giardia lamblia
ATCC 50803]
Length = 124
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 11/61 (18%)
Query: 32 LLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLR 91
+ G ++A+DRH N+V E W E + ++R LRGD+VI+V+
Sbjct: 74 ITGVLKAYDRHLNLVFSEATETWEE---------NGIEYTEER--KNFMLRGDNVIMVVS 122
Query: 92 N 92
N
Sbjct: 123 N 123
>gi|425767040|gb|EKV05625.1| U6 small nuclear ribonucleoprotein (Lsm3), putative [Penicillium
digitatum Pd1]
gi|425780202|gb|EKV18219.1| U6 small nuclear ribonucleoprotein (Lsm3), putative [Penicillium
digitatum PHI26]
Length = 96
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D HCN+VL +V E + + ++ + K + +F+RGDSV+++
Sbjct: 36 ELKGRLHAYDSHCNLVLGDVEETIYVVEEDENEEETLRTIKKQEEM--LFVRGDSVVLI 92
>gi|255953441|ref|XP_002567473.1| Pc21g04270 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589184|emb|CAP95324.1| Pc21g04270 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 96
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D HCN+VL +V E + + ++ + K + +F+RGDSV+++
Sbjct: 36 ELKGRLHAYDSHCNLVLGDVEETIYVVEEDENEEETLRTIKKQEEM--LFVRGDSVVLI 92
>gi|429850300|gb|ELA25589.1| u6 small nuclear ribonucleoprotein [Colletotrichum
gloeosporioides Nara gc5]
Length = 96
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 31 QLLGRVRAFDRHCNMVLENVRE-MWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D HCN+VL V E ++ + K + R +F+RGDSV+++
Sbjct: 35 ELKGRLHAYDSHCNLVLGEVEETIYVVDEDEEDEEVKTIS----RKSEMLFVRGDSVVLI 90
>gi|255087740|ref|XP_002505793.1| predicted protein [Micromonas sp. RCC299]
gi|226521063|gb|ACO67051.1| predicted protein [Micromonas sp. RCC299]
Length = 204
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 14/83 (16%)
Query: 12 NSQTTLMLFCFWALEFIVL---QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKAL 68
N + ++ + + + ++ Q++GR AFDRH N+VL + E + +LP KK L
Sbjct: 4 NRTSKMLAYINYRMRITIVDGRQIVGRFMAFDRHMNLVLSDAEE-FRKLP-----PKKGL 57
Query: 69 PVNKDRFISK----MFLRGDSVI 87
+DR + + + LRG+ V+
Sbjct: 58 -TEEDRAVRRVLGFILLRGEEVV 79
>gi|428183707|gb|EKX52564.1| hypothetical protein GUITHDRAFT_48153, partial [Guillardia theta
CCMP2712]
Length = 75
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVI 87
QL+G+ AFD+H N+VL + E K GKG+++ + R + + LRG+SV+
Sbjct: 15 QLVGKFMAFDKHMNIVLGDCDEFRRLSVKGGKGEER----EEKRSLGLVILRGESVV 67
>gi|402077069|gb|EJT72418.1| hypothetical protein GGTG_09284, partial [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 142
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/19 (78%), Positives = 17/19 (89%)
Query: 31 QLLGRVRAFDRHCNMVLEN 49
+LL RV+AFD HCNMVLEN
Sbjct: 124 KLLARVKAFDYHCNMVLEN 142
>gi|320587366|gb|EFW99846.1| u6 small nuclear ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 99
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
+L GR+ A+D HCN+VL +V E + + + + R +F+RGDSV+++
Sbjct: 35 ELKGRLHAYDSHCNLVLGDVEETIYITDEDDEDESEQEVRTVSRKSEMLFVRGDSVVLIS 94
Query: 91 RNPK 94
P+
Sbjct: 95 PVPQ 98
>gi|15237095|ref|NP_193777.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis
thaliana]
gi|30685110|ref|NP_849414.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis
thaliana]
gi|79325195|ref|NP_001031682.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis
thaliana]
gi|238480869|ref|NP_001154258.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis
thaliana]
gi|5262167|emb|CAB45810.1| putative snRNP protein [Arabidopsis thaliana]
gi|7268840|emb|CAB79044.1| putative snRNP protein [Arabidopsis thaliana]
gi|28393634|gb|AAO42236.1| putative snRNP protein [Arabidopsis thaliana]
gi|28827492|gb|AAO50590.1| putative snRNP protein [Arabidopsis thaliana]
gi|222423490|dbj|BAH19715.1| AT4G20440 [Arabidopsis thaliana]
gi|332658930|gb|AEE84330.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis
thaliana]
gi|332658931|gb|AEE84331.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis
thaliana]
gi|332658932|gb|AEE84332.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis
thaliana]
gi|332658933|gb|AEE84333.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis
thaliana]
Length = 257
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 10/61 (16%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKD----RFISKMFLRGDSV 86
QL+G+ AFDRH N+VL + E + +LP KGKK +N++ R + + LRG+ V
Sbjct: 26 QLVGKFMAFDRHMNLVLGDCEE-FRKLPPA-KGKK----INEEREDRRTLGLVLLRGEEV 79
Query: 87 I 87
I
Sbjct: 80 I 80
>gi|260949819|ref|XP_002619206.1| hypothetical protein CLUG_00365 [Clavispora lusitaniae ATCC 42720]
gi|238846778|gb|EEQ36242.1| hypothetical protein CLUG_00365 [Clavispora lusitaniae ATCC 42720]
Length = 164
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 9/64 (14%)
Query: 34 GRVRAFDRHCNMVLENVREM------WTELPKTGKGKKKALPVNKD-RFISKMFLRGDSV 86
G++ AFD+H N+VL + E + EL K G + + VN+D RF+ + LRG+ V
Sbjct: 64 GQLLAFDKHMNLVLADTEEARTTKKSYQELAKAKVGSQ--VKVNEDKRFLGLIILRGEQV 121
Query: 87 IIVL 90
+ V+
Sbjct: 122 VSVV 125
>gi|412991245|emb|CCO16090.1| U6 snRNA-associated Sm-like protein LSm3 [Bathycoccus prasinos]
Length = 114
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ ++D+H NM+L V E+ T + ++ + NK R + +F+RGD+V ++
Sbjct: 50 ELRGKLHSYDQHLNMLLGEVEEITTIREVDEETYEEIIKSNK-RSVPYLFVRGDAVTLI 107
>gi|389746884|gb|EIM88063.1| like-Sm ribonucleo protein [Stereum hirsutum FP-91666 SS1]
Length = 97
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 31 QLLGRVRAFDRHCNMVLENVRE--MWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVII 88
+L G + A+D H N++L +V E M + P+ + + + K R + +F+RGD VI+
Sbjct: 32 ELTGILHAYDGHMNLILSDVEETIMIVDAPEGVPPSQSVVNMAK-RKVPMLFVRGDGVIL 90
Query: 89 V 89
V
Sbjct: 91 V 91
>gi|346978857|gb|EGY22309.1| hypothetical protein VDAG_03747 [Verticillium dahliae VdLs.17]
Length = 493
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 8 FSFRNSQTTLMLFCFWALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKT 60
FSFR+S T L L +W + + RV A C VLE+ ++M+ +L T
Sbjct: 351 FSFRDSTTALALITYWTATLLFRATVDRVHA--AVCAPVLEDFQDMYADLSPT 401
>gi|209882013|ref|XP_002142444.1| LSM domain-containing protein [Cryptosporidium muris RN66]
gi|209558050|gb|EEA08095.1| LSM domain-containing protein [Cryptosporidium muris RN66]
Length = 91
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 22 FWALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFL 81
W + L L G+++ FD + N+VL++V E++T+ + + R I ++ L
Sbjct: 30 IWLYDHPELSLEGKIQGFDEYMNIVLDDVTEVYTKKDEVSR-----------RDIGRLML 78
Query: 82 RGDSVIIV 89
RG+++ ++
Sbjct: 79 RGENISLI 86
>gi|448118085|ref|XP_004203416.1| Piso0_001025 [Millerozyma farinosa CBS 7064]
gi|448120526|ref|XP_004203999.1| Piso0_001025 [Millerozyma farinosa CBS 7064]
gi|359384284|emb|CCE78988.1| Piso0_001025 [Millerozyma farinosa CBS 7064]
gi|359384867|emb|CCE78402.1| Piso0_001025 [Millerozyma farinosa CBS 7064]
Length = 90
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 16/86 (18%)
Query: 4 IQIRFSFRNSQTTLMLFCFWALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKTGKG 63
I + F + Q+ L W E ++ G++R FD N+V+++ +E+ TE G
Sbjct: 16 INLIFKYLQQQS---LVTIWLFEQTQSRIQGKIRGFDEFMNIVIDDAKEISTE-----DG 67
Query: 64 KKKALPVNKDRFISKMFLRGDSVIIV 89
+AL ++ L+GD++ ++
Sbjct: 68 SSEAL--------GRILLKGDNITLI 85
>gi|345787463|ref|XP_003432927.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like [Canis
lupus familiaris]
Length = 102
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D+H NM+L +V E T + + ++ K R I +F+ GD V++V
Sbjct: 38 ELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEIYKSTK-RNIPMLFVWGDCVVLV 95
>gi|51970288|dbj|BAD43836.1| unknown protein [Arabidopsis thaliana]
Length = 254
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 9/61 (14%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKD----RFISKMFLRGDSV 86
QL+G+ AFDRH N+VL + E + +LP KG KK N++ R + + LRG+ V
Sbjct: 26 QLIGKFMAFDRHMNLVLGDCEE-FRKLPPA-KGNKK---TNEEREERRTLGLVLLRGEEV 80
Query: 87 I 87
I
Sbjct: 81 I 81
>gi|389739317|gb|EIM80511.1| Sm-like ribonucleo protein [Stereum hirsutum FP-91666 SS1]
Length = 179
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 32 LLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNK-DRFISKMFLRGDSVIIV 89
L G++ AFDRH N+VL E PK G+ +A P + R + + LRG++V+ +
Sbjct: 29 LTGQMLAFDRHMNLVLAECEEFRRVRPKKKAGEAEAGPEQEMKRTLGLVILRGETVVSI 87
>gi|326435095|gb|EGD80665.1| LSM domain-containing protein [Salpingoeca sp. ATCC 50818]
Length = 91
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 32 LLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
L G++ A+D+H NMVL +V E T + + + + +R + +++RGD VI+V
Sbjct: 30 LSGQLHAYDQHLNMVLSDVVETIT-TSEIDEESYEEIIKTTERKMPMLYVRGDGVILV 86
>gi|331212255|ref|XP_003307397.1| small nuclear ribonucleoprotein E [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|309297800|gb|EFP74391.1| small nuclear ribonucleoprotein E [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 98
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 1 MLVIQIRFSFRNSQTTLMLFCFWALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKT 60
++V I F++ Q L W + +L G++ FD N+VL+N E+W + K
Sbjct: 8 VMVQPINVIFKHLQAG-QLVHIWLYDNTEFRLEGKIIGFDEFMNVVLDNASEVWVK-SKK 65
Query: 61 GKGKKKALPVNKDRFISKMFLRGDSVIIV 89
G ++A+ + ++ L+G+++ ++
Sbjct: 66 GTPHREAVEKGARVSLGRLLLKGENITLI 94
>gi|170091648|ref|XP_001877046.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648539|gb|EDR12782.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 96
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 8/63 (12%)
Query: 31 QLLGRVRAFDRHCNMVLENVRE----MWTELPKTGKGKKKALPVNKDRFISKMFLRGDSV 86
+L G + A+D H N+++ +V E + T+ TG+G L V K R + +F+RGD V
Sbjct: 32 ELTGILHAYDGHMNLIMSDVEETILIVDTDSVPTGQG---VLQVAK-RKMEMLFVRGDGV 87
Query: 87 IIV 89
I+V
Sbjct: 88 ILV 90
>gi|395853650|ref|XP_003799317.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like
[Otolemur garnettii]
Length = 102
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L R+ A+D+H NM+ +V E T + + ++ K R I +F+RGD V++V
Sbjct: 38 ELRSRLHAYDQHLNMIYGDVEETVTTIEIDEETYEEIYKSTK-RNIPMLFVRGDGVVLV 95
>gi|358382874|gb|EHK20544.1| hypothetical protein TRIVIDRAFT_90246 [Trichoderma virens Gv29-8]
Length = 97
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ A+D HCN+VL +V E + + + ++ R +F+RGDSV+++
Sbjct: 35 ELKGKLHAYDSHCNLVLGDVEETIYAVDDDEEEGDEVKTIS--RKSEMLFVRGDSVVLI 91
>gi|84043878|ref|XP_951729.1| small nuclear ribonucleoprotein [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|33348718|gb|AAQ16042.1| small nuclear ribonucleoprotein SmD2 [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|62358544|gb|AAX79005.1| small nuclear ribonucleoprotein SmD2 [Trypanosoma brucei]
Length = 111
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 17/67 (25%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVN---KDRFISKMFLRGDSVI 87
L+ V AFD+H N+VL + E+ VN K+R I MFLRG SV+
Sbjct: 56 SLVATVVAFDKHFNLVLRDAVELTM--------------VNNEQKERSIRNMFLRGASVV 101
Query: 88 IVLRNPK 94
++R P+
Sbjct: 102 FIVRLPQ 108
>gi|9837176|gb|AAG00462.1|AF280394_1 Sm-D2 [Trypanosoma brucei]
gi|261326673|emb|CBH09635.1| small nuclear ribonucleoprotein SmD2 [Trypanosoma brucei gambiense
DAL972]
Length = 111
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 17/67 (25%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVN---KDRFISKMFLRGDSVI 87
L+ V AFD+H N+VL + E+ VN K+R I MFLRG SV+
Sbjct: 56 SLVATVVAFDKHFNLVLRDAVELTM--------------VNNEQKERSIRNMFLRGASVV 101
Query: 88 IVLRNPK 94
++R P+
Sbjct: 102 FIVRLPQ 108
>gi|15241519|ref|NP_199263.1| small nuclear ribonucleoprotein B and B' [Arabidopsis thaliana]
gi|79329893|ref|NP_001032011.1| small nuclear ribonucleoprotein B and B' [Arabidopsis thaliana]
gi|9758703|dbj|BAB09157.1| unnamed protein product [Arabidopsis thaliana]
gi|14596137|gb|AAK68796.1| Unknown protein [Arabidopsis thaliana]
gi|18377438|gb|AAL66885.1| unknown protein [Arabidopsis thaliana]
gi|51971895|dbj|BAD44612.1| unknown protein [Arabidopsis thaliana]
gi|62320496|dbj|BAD95039.1| hypothetical protein [Arabidopsis thaliana]
gi|332007733|gb|AED95116.1| small nuclear ribonucleoprotein B and B' [Arabidopsis thaliana]
gi|332007734|gb|AED95117.1| small nuclear ribonucleoprotein B and B' [Arabidopsis thaliana]
Length = 254
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 9/61 (14%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKD----RFISKMFLRGDSV 86
QL+G+ AFDRH N+VL + E + +LP KG KK N++ R + + LRG+ V
Sbjct: 26 QLIGKFMAFDRHMNLVLGDCEE-FRKLPPA-KGNKK---TNEEREERRTLGLVLLRGEEV 80
Query: 87 I 87
I
Sbjct: 81 I 81
>gi|297794953|ref|XP_002865361.1| hypothetical protein ARALYDRAFT_494537 [Arabidopsis lyrata subsp.
lyrata]
gi|297311196|gb|EFH41620.1| hypothetical protein ARALYDRAFT_494537 [Arabidopsis lyrata subsp.
lyrata]
Length = 256
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVI 87
QL+G+ AFDRH N+VL + E + +LP KK + R + + LRG+ VI
Sbjct: 26 QLIGKFMAFDRHMNLVLGDCEE-FRKLPPAKGSKKTKEDREERRTLGLVLLRGEEVI 81
>gi|367001997|ref|XP_003685733.1| hypothetical protein TPHA_0E02070 [Tetrapisispora phaffii CBS
4417]
gi|357524032|emb|CCE63299.1| hypothetical protein TPHA_0E02070 [Tetrapisispora phaffii CBS
4417]
Length = 94
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 17/86 (19%)
Query: 8 FSFRNSQTTLMLFCFWALEFIVLQLLGRVRAFDRHCNMVLENVREM----WTELPKTGKG 63
F+F QT L FW E + ++ G+V FD N+V++N E+ T + + G
Sbjct: 16 FNFLQQQT---LVSFWLYEQVGFRIRGKVAGFDEFMNVVIDNAIEIPVDAETGIERVTDG 72
Query: 64 KKKALPVNKDRFISKMFLRGDSVIIV 89
KK + ++ L+GD++ ++
Sbjct: 73 KK----------LGRILLKGDNITLI 88
>gi|302422556|ref|XP_003009108.1| small nuclear ribonucleoprotein E [Verticillium albo-atrum
VaMs.102]
gi|261352254|gb|EEY14682.1| small nuclear ribonucleoprotein E [Verticillium albo-atrum
VaMs.102]
gi|346970265|gb|EGY13717.1| LSM domain-containing protein [Verticillium dahliae VdLs.17]
Length = 94
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 44/82 (53%), Gaps = 11/82 (13%)
Query: 8 FSFRNSQTTLMLFCFWALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKA 67
F Q T+ + W E + +++ G++R FD N+V++N E+ ++ KT K + +
Sbjct: 21 FKLLQQQATVQV---WLYEQLSIRIEGKIRGFDEFMNLVIDNAVEV-KQITKTNKEETR- 75
Query: 68 LPVNKDRFISKMFLRGDSVIIV 89
R + ++ L+GD+V ++
Sbjct: 76 ------RSLGQILLKGDNVSLI 91
>gi|449016467|dbj|BAM79869.1| Sm protein E [Cyanidioschyzon merolae strain 10D]
Length = 105
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 9/67 (13%)
Query: 23 WALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLR 82
W E L G +R FD H N+VL + E W T K K++ + + + L+
Sbjct: 29 WLFENTRYSLEGTLRGFDEHTNLVLVDTVEQW---GSTAKHKRRTVA------LGTILLK 79
Query: 83 GDSVIIV 89
G++V++V
Sbjct: 80 GENVVLV 86
>gi|440297058|gb|ELP89788.1| hypothetical protein EIN_425100 [Entamoeba invadens IP1]
Length = 85
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 17/80 (21%)
Query: 10 FRNSQTTLMLFCFWALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALP 69
RN Q W E +++ GR+ AFD + N+ LE E++ +
Sbjct: 20 IRNKQK----VTIWLYENTAMKIEGRITAFDTYMNITLEQAEEVY-------------VK 62
Query: 70 VNKDRFISKMFLRGDSVIIV 89
+ R I + L+GD++ +V
Sbjct: 63 TSNRRSIGNIMLKGDNIAVV 82
>gi|225463717|ref|XP_002263359.1| PREDICTED: small nuclear ribonucleoprotein-associated protein B'
[Vitis vinifera]
gi|147774905|emb|CAN61706.1| hypothetical protein VITISV_001610 [Vitis vinifera]
Length = 276
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVI 87
QL+G+ AFDRH N+VL + E + +LP KGKK + R + + LRG+ VI
Sbjct: 26 QLVGKFMAFDRHMNLVLGDCEE-FRKLPPA-KGKKNEE-REERRTLGLVLLRGEEVI 79
>gi|302891811|ref|XP_003044787.1| hypothetical protein NECHADRAFT_61990 [Nectria haematococca mpVI
77-13-4]
gi|256725712|gb|EEU39074.1| hypothetical protein NECHADRAFT_61990 [Nectria haematococca mpVI
77-13-4]
Length = 96
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 31 QLLGRVRAFDRHCNMVLENVRE-MWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ A+D HCN+VL V E ++T + K + R +F+RGDSV+++
Sbjct: 35 ELKGKLHAYDSHCNLVLGEVEETIYTVDEDDEDDEVKTI----SRKSEMLFVRGDSVVLI 90
>gi|449017577|dbj|BAM80979.1| Sm protein E [Cyanidioschyzon merolae strain 10D]
Length = 105
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 9/67 (13%)
Query: 23 WALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLR 82
W E L G +R FD H N+VL + E W T K K++ + + + L+
Sbjct: 29 WLFENTRYSLEGTLRGFDEHTNLVLVDTVEQW---GSTAKHKRRTVA------LGTILLK 79
Query: 83 GDSVIIV 89
G++V++V
Sbjct: 80 GENVVLV 86
>gi|453085619|gb|EMF13662.1| LSM-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 99
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 22 FWALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFL 81
W E + +++ G++R FD N+V+++ E+ ++ KG+ R + ++ L
Sbjct: 32 IWLYEQLGIRIEGKIRGFDEFMNLVIDDA----VEVQQSAKGETNEDSKEGRRELGQILL 87
Query: 82 RGDSVIIV 89
+GD+V ++
Sbjct: 88 KGDNVCLI 95
>gi|308162403|gb|EFO64802.1| Small nuclear ribonucleoprotein Sm D2, putative [Giardia lamblia
P15]
Length = 83
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 11/61 (18%)
Query: 32 LLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLR 91
+ G ++A+DRH N+V E W E + ++R LRGD+VI+V+
Sbjct: 33 ITGVLKAYDRHLNLVFSEATETWEE---------NGIEYTEER--KNFMLRGDNVIMVVS 81
Query: 92 N 92
N
Sbjct: 82 N 82
>gi|452842154|gb|EME44090.1| hypothetical protein DOTSEDRAFT_130967 [Dothistroma septosporum
NZE10]
Length = 99
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 22 FWALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFL 81
W E + +++ G++R FD N+V+++ E+ + KG+ + ++ R + ++ L
Sbjct: 32 IWLYEQLGIRIEGKIRGFDEFMNLVIDDA----VEVKQPAKGQTEEDVKDQRRELGQILL 87
Query: 82 RGDSVIIV 89
+GD+V ++
Sbjct: 88 KGDNVCLI 95
>gi|307105649|gb|EFN53897.1| hypothetical protein CHLNCDRAFT_136065 [Chlorella variabilis]
Length = 239
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 13/69 (18%)
Query: 38 AFDRHCNMVLENVREMWTELPKTGKGKKKALPV-------------NKDRFISKMFLRGD 84
AFD+H N+VL +V E +T L + + K A ++ R + ++F+RGD
Sbjct: 143 AFDKHMNLVLRDVEEQYTVLLQVQRVKPPAPGSSGLERTRWVRQQEHRRRQLRQVFVRGD 202
Query: 85 SVIIVLRNP 93
SV++V P
Sbjct: 203 SVVLVSAGP 211
>gi|123493455|ref|XP_001326296.1| Sm protein [Trichomonas vaginalis G3]
gi|121909208|gb|EAY14073.1| Sm protein [Trichomonas vaginalis G3]
Length = 84
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVI 87
+L G + A+D H N++L +V E L K G K +PV +++ I +F+RGD ++
Sbjct: 28 ELEGVLHAYDEHYNIILGDVLESIMGLDKNG----KFIPVRQNQ-IDMLFVRGDRIV 79
>gi|395331807|gb|EJF64187.1| Sm-like ribonucleo protein [Dichomitus squalens LYAD-421 SS1]
Length = 181
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 33 LGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNK-DRFISKMFLRGDSVI 87
+G++ AFDRH N+VL E PK G+ +A P+ + R + + LRG++V+
Sbjct: 30 VGQMLAFDRHMNLVLAECEEFRRVRPKKKPGETEAGPMQEMKRTLGLVILRGETVV 85
>gi|346468665|gb|AEO34177.1| hypothetical protein [Amblyomma maculatum]
Length = 99
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 23 WALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLR 82
W E + L++ G + FD + N+VL++ E++T K+ + K+ A+P ++ L+
Sbjct: 35 WLYENVALRIEGHIIGFDEYMNLVLDDAEEIYT---KSKQRKQVAIPRP-----GRILLK 86
Query: 83 GDSVIIVL 90
G+++ +++
Sbjct: 87 GENISLIM 94
>gi|302686860|ref|XP_003033110.1| hypothetical protein SCHCODRAFT_67091 [Schizophyllum commune
H4-8]
gi|300106804|gb|EFI98207.1| hypothetical protein SCHCODRAFT_67091 [Schizophyllum commune
H4-8]
Length = 179
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVI 87
QL+G++ AFDRH N+VL E PK G++ R + + LRG++V+
Sbjct: 28 QLVGQMLAFDRHMNLVLAECEEFRRIRPKKKPGQETQPEQEVKRALGLVILRGETVV 84
>gi|255717787|ref|XP_002555174.1| KLTH0G03102p [Lachancea thermotolerans]
gi|238936558|emb|CAR24737.1| KLTH0G03102p [Lachancea thermotolerans CBS 6340]
Length = 94
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 8 FSFRNSQTTLMLFCFWALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKA 67
F+F QT L FW E + ++ GR+ FD N+V+++ E+ + KTG
Sbjct: 17 FNFLQQQT---LVNFWLFEQVQTRIRGRISGFDEFMNVVIDDASEIPIDT-KTG----SE 68
Query: 68 LPVNKDRFISKMFLRGDSVIIV 89
LP ++ + ++ L+GD++ ++
Sbjct: 69 LP-DQAVKLGRILLKGDNITLI 89
>gi|310798264|gb|EFQ33157.1| LSM domain-containing protein [Glomerella graminicola M1.001]
Length = 96
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 22 FWALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFL 81
W E + +++ G++R FD N+V+++ E+ K K P K R + ++ L
Sbjct: 32 IWLYEQLSIRIEGKIRGFDEFMNLVIDDAVEV--------KQVTKTNPEEKRRALGQILL 83
Query: 82 RGDSVIIV 89
+GD+V ++
Sbjct: 84 KGDNVSLI 91
>gi|255075507|ref|XP_002501428.1| predicted protein [Micromonas sp. RCC299]
gi|226516692|gb|ACO62686.1| predicted protein [Micromonas sp. RCC299]
Length = 573
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 37/62 (59%), Gaps = 8/62 (12%)
Query: 36 VRAFDRHCNMVLENVREMWT--------ELPKTGKGKKKALPVNKDRFISKMFLRGDSVI 87
++AFD + NMVL++V E +T + + G+ + K ++ R ++++FLRG+ V+
Sbjct: 375 LKAFDVYMNMVLQDVHEAYTVRLRHSVVDPKRPGRTRVKYKLEHRRRHMNQVFLRGEQVV 434
Query: 88 IV 89
+
Sbjct: 435 TI 436
>gi|408389243|gb|EKJ68711.1| hypothetical protein FPSE_11107 [Fusarium pseudograminearum
CS3096]
Length = 96
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 31 QLLGRVRAFDRHCNMVLENVRE-MWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ A+D HCN+VL V E ++T + K + R +F+RGDSV+++
Sbjct: 35 ELKGKLHAYDSHCNLVLGEVEETIYTVDEDDDDDELKTI----SRKSEMLFVRGDSVVLI 90
>gi|409081623|gb|EKM81982.1| hypothetical protein AGABI1DRAFT_112159 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426196857|gb|EKV46785.1| hypothetical protein AGABI2DRAFT_136942 [Agaricus bisporus var.
bisporus H97]
Length = 178
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 32 LLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
L G++ AFDRH N+VL + E PK G++ A R + + LRG++V+ +
Sbjct: 29 LTGQMLAFDRHMNLVLADCEEFRRVRPKKKAGEETAPEQEMKRTLGLVILRGETVVSI 86
>gi|324510990|gb|ADY44587.1| Small nuclear ribonucleoprotein-associated protein B [Ascaris
suum]
Length = 165
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 33 LGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVI 87
+G RAFD+H N++L E PK G KK+ P + R + + LRG+ ++
Sbjct: 28 VGYFRAFDKHMNILLSECEEFRAIKPKPG---KKSAPEEEMRTLGLVLLRGEHIV 79
>gi|336363832|gb|EGN92203.1| hypothetical protein SERLA73DRAFT_147568 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380958|gb|EGO22110.1| hypothetical protein SERLADRAFT_394784 [Serpula lacrymans var.
lacrymans S7.9]
Length = 100
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 32 LLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNK-DRFISKMFLRGDSVI 87
L G++ AFDRH N+VL + E PK G+ + P + R + + LRG++V+
Sbjct: 29 LTGQMLAFDRHMNLVLADCEEFRRVRPKKKAGETETPPEQEMKRALGLVILRGETVV 85
>gi|449018855|dbj|BAM82257.1| similar to Sm protein E [Cyanidioschyzon merolae strain 10D]
Length = 181
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 9/67 (13%)
Query: 23 WALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLR 82
W E L G +R FD H N+VL + E W T K K++ + + + L+
Sbjct: 29 WLFENTRYSLEGTLRGFDEHTNLVLVDTVEQWG---STAKHKRRTV------ALGTILLK 79
Query: 83 GDSVIIV 89
G++V++V
Sbjct: 80 GENVVLV 86
>gi|402079438|gb|EJT74703.1| sm snRNP core protein Sme1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 94
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 1 MLVIQIRFSFRNSQTTLMLFCFWALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKT 60
+L+ I F F+ Q+ + W E + +++ G++R FD N+VL++ E+
Sbjct: 12 ILLPPINFIFKLLQSHAPV-QIWLYEQLGIRIEGKIRGFDEFMNLVLDDAVEI------- 63
Query: 61 GKGKKKALPVNKDRFISKMFLRGDSVIIV 89
K K P K R + ++ L+GD+V ++
Sbjct: 64 -KQVTKENPEEKRRPLGQILLKGDNVSLI 91
>gi|346320143|gb|EGX89744.1| U6 small nuclear ribonucleoprotein (Lsm3), putative [Cordyceps
militaris CM01]
Length = 96
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISK----MFLRGDSV 86
+L G++ A+D HCN+VL V E T G + + + IS+ +F+RGDSV
Sbjct: 35 ELKGKLHAYDSHCNLVLGEVEE-------TIYGVDEEDDEEEAKTISRKSEMLFVRGDSV 87
Query: 87 IIV 89
+++
Sbjct: 88 VLI 90
>gi|347841002|emb|CCD55574.1| similar to U6 snRNA-associated Sm-like protein LSm3 [Botryotinia
fuckeliana]
Length = 98
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D HCN+VL +V E + ++ + + + +F+RGDSVI++
Sbjct: 35 ELKGRLHAYDSHCNLVLGDVVETIYVVEESEDDDGEEIVKTVVKKSEMLFVRGDSVILI 93
>gi|358397340|gb|EHK46715.1| hypothetical protein TRIATDRAFT_299236 [Trichoderma atroviride
IMI 206040]
Length = 97
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ A+D HCN+VL V E + + + ++ R +F+RGDSV+++
Sbjct: 35 ELKGKLHAYDSHCNLVLGEVEETIYAVDDDEEESDEVKTIS--RKSEMLFVRGDSVVLI 91
>gi|392565532|gb|EIW58709.1| Sm-like ribonucleo protein [Trametes versicolor FP-101664 SS1]
Length = 178
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 33 LGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNK-DRFISKMFLRGDSVI 87
+G++ AFDRH N+VL E PK G+ +A P+ + R + + LRG++V+
Sbjct: 30 VGQMLAFDRHMNLVLAECEEFRRVRPKKKAGETEAGPMQEMKRTLGLVILRGETVV 85
>gi|169849793|ref|XP_001831595.1| SMB [Coprinopsis cinerea okayama7#130]
gi|116507233|gb|EAU90128.1| SMB [Coprinopsis cinerea okayama7#130]
Length = 168
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 32 LLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
L G++ AFDRH N+VL + E PK G++ A R + + LRG++V+ +
Sbjct: 19 LTGQMLAFDRHMNLVLADCEEFRRVRPKKKAGEEVAPEQELKRTLGLVILRGEAVVSI 76
>gi|302849879|ref|XP_002956468.1| hypothetical protein VOLCADRAFT_107252 [Volvox carteri f.
nagariensis]
gi|300258166|gb|EFJ42405.1| hypothetical protein VOLCADRAFT_107252 [Volvox carteri f.
nagariensis]
Length = 297
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVI 87
Q++GR AFDRH N+VL + E PK GK +++ R + + LRG+ +I
Sbjct: 26 QIVGRFMAFDRHMNLVLGDSEEFRRLPPKKGKSEEEREER---RVLGLVLLRGEEII 79
>gi|313228047|emb|CBY23197.1| unnamed protein product [Oikopleura dioica]
Length = 90
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 13/72 (18%)
Query: 23 WALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLR 82
W + + L+L G + FD + N+VL++V EM + + R + K+ L+
Sbjct: 32 WLYDVVNLRLEGIIVGFDEYMNLVLDDVEEM-------------HVKTHFKRNVGKILLK 78
Query: 83 GDSVIIVLRNPK 94
GD++ ++ + P+
Sbjct: 79 GDNITLIQQAPQ 90
>gi|336260805|ref|XP_003345195.1| hypothetical protein SMAC_07871 [Sordaria macrospora k-hell]
gi|380088006|emb|CCC05133.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 97
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L GR+ A+D HCN+VL V E + + ++ R +F+RGDSV+++
Sbjct: 35 ELKGRLHAYDSHCNLVLGEVEETIYVVDDEDADEDDLKTIS--RKSEMLFVRGDSVVLI 91
>gi|356534803|ref|XP_003535941.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm3-like
isoform 1 [Glycine max]
Length = 97
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ A+D+H N+VL +V E+ T + L K R + +F+RGD VI+V
Sbjct: 33 ELRGKLHAYDQHLNIVLGDVEEIVTTVEIDDLLFSFLLQTTK-RTVPFLFVRGDGVILV 90
>gi|340054745|emb|CCC49047.1| putative small nuclear ribonucleoprotein SmD2 [Trypanosoma vivax
Y486]
Length = 111
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 11/64 (17%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL 90
L+ V AFD+H N+VL + E+ + K + ++R I MFLRG SV+ V+
Sbjct: 56 SLVATVVAFDKHFNLVLRDAVELT--MVKNEQ---------RERSIRNMFLRGSSVVFVV 104
Query: 91 RNPK 94
+ P+
Sbjct: 105 KLPQ 108
>gi|219129945|ref|XP_002185137.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403316|gb|EEC43269.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 89
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G++ +D+H NM+L +V E T + + + + + R + +F+RGD V++V
Sbjct: 25 ELRGKLHGYDQHLNMILGDVEETVTST-EIDEETDEQIVKKQTRKVGMLFVRGDIVVLV 82
>gi|429850739|gb|ELA25982.1| small nuclear ribonucleoprotein [Colletotrichum gloeosporioides
Nara gc5]
Length = 96
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 6 IRFSFR--NSQTTLMLFCFWALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKTGKG 63
I F FR TT+ + W E + +++ G++R FD N+V+++ E+ K
Sbjct: 17 INFIFRLLQQHTTVQI---WLYEQLSIRIEGKIRGFDEFMNLVIDDAVEV--------KQ 65
Query: 64 KKKALPVNKDRFISKMFLRGDSVIIV 89
K P R + ++ L+GD+V ++
Sbjct: 66 VTKTNPEESRRPLGQILLKGDNVSLI 91
>gi|412991162|emb|CCO16007.1| predicted protein [Bathycoccus prasinos]
Length = 246
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 10/64 (15%)
Query: 36 VRAFDRHCNMVLENVREMWTELPK------TGKGKKKA----LPVNKDRFISKMFLRGDS 85
+ AFD++ N V ++ E ++ + GKG+ K + ++R +S+MFLRG+S
Sbjct: 148 ISAFDKYFNFVAHDIEERYSVRVRKEKEYVNGKGETKTRRRRVIEQRERKVSQMFLRGES 207
Query: 86 VIIV 89
V++V
Sbjct: 208 VVLV 211
>gi|241838714|ref|XP_002415212.1| small nuclear ribonucleoprotein E, putative [Ixodes scapularis]
gi|215509424|gb|EEC18877.1| small nuclear ribonucleoprotein E, putative [Ixodes scapularis]
Length = 94
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 39/68 (57%), Gaps = 13/68 (19%)
Query: 23 WALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLR 82
W E ++L++ G + FD + N+VL++ E++T KT + K+ + ++ L+
Sbjct: 35 WLYENVILRIEGHIIGFDEYMNLVLDDAEEIYT---KTKQRKQ----------VGRILLK 81
Query: 83 GDSVIIVL 90
G+++ +++
Sbjct: 82 GENITLIM 89
>gi|331225531|ref|XP_003325436.1| U6 snRNA-associated Sm-like protein LSm3 [Puccinia graminis f.
sp. tritici CRL 75-36-700-3]
gi|309304426|gb|EFP81017.1| U6 snRNA-associated Sm-like protein LSm3 [Puccinia graminis f.
sp. tritici CRL 75-36-700-3]
Length = 97
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 32 LLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
L G + A+D H NMVL +V E T + + + R +F+RGD V++V
Sbjct: 34 LNGTLHAYDGHMNMVLSDVIETITVVEPAANPDDEPIIRTVKRNCEMLFVRGDGVVLV 91
>gi|326472596|gb|EGD96605.1| GTP-binding protein [Trichophyton tonsurans CBS 112818]
Length = 779
Score = 34.7 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDS 85
+L GR+ A+D HCN+VL +V E + + G++ + K +F+RG S
Sbjct: 37 ELKGRLHAYDSHCNIVLGDVEETIYIVEENEAGEETIKTIKKQE--EMLFVRGTS 89
>gi|256083947|ref|XP_002578196.1| hypothetical protein [Schistosoma mansoni]
gi|353232715|emb|CCD80070.1| hypothetical protein Smp_160100 [Schistosoma mansoni]
Length = 475
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 32 LLGRVRAFDRHCNMVLENVREMWTELPKT---GKGKKKALPVNKDRFISKMFLRGDSVII 88
++G + AFDR+ N++L+NV E LPK+ G GK +++ + K F R + +
Sbjct: 219 IIGNLVAFDRYWNLILKNVTEYSVHLPKSALKGNGKPGRSKKRREQRLRK-FQRNNDALF 277
Query: 89 VLR 91
L+
Sbjct: 278 QLK 280
>gi|342180098|emb|CCC89574.1| putative small nuclear ribonucleoprotein SmD2 [Trypanosoma
congolense IL3000]
Length = 111
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 11/63 (17%)
Query: 32 LLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLR 91
L+ V AFD+H N+VL + E+ + K+R I MFLRG SV+ +++
Sbjct: 57 LVATVVAFDKHFNLVLRDAVELMMINDE-----------QKERSIRNMFLRGASVVFIVK 105
Query: 92 NPK 94
P+
Sbjct: 106 LPQ 108
>gi|384491006|gb|EIE82202.1| hypothetical protein RO3G_06907 [Rhizopus delemar RA 99-880]
Length = 102
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G + A+D H NMVL V E T + + ++ + K R +F+RGD VI+V
Sbjct: 39 ELTGILHAYDGHLNMVLGEVEETITMVDVNEETLEEVIRTVK-RTFEMLFVRGDGVILV 96
>gi|440636915|gb|ELR06834.1| hypothetical protein GMDG_08125 [Geomyces destructans 20631-21]
Length = 98
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 39/69 (56%), Gaps = 8/69 (11%)
Query: 21 CFWALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMF 80
W E I +++ G++R FD N+V+++ E+ ++ KT + + + R + ++
Sbjct: 33 SIWLYEQIAIRIEGKIRGFDEFMNLVIDDAIEVG-QITKTNETETR-------RPLGRIL 84
Query: 81 LRGDSVIIV 89
L+GD+V ++
Sbjct: 85 LKGDNVSLI 93
>gi|398365473|ref|NP_014802.3| Sme1p [Saccharomyces cerevisiae S288c]
gi|2500647|sp|Q12330.1|RUXE_YEAST RecName: Full=Small nuclear ribonucleoprotein E; Short=snRNP-E;
AltName: Full=Sm protein E; Short=Sm-E; Short=SmE
gi|1293719|gb|AAC49645.1| similar to the mammalian snRNP-E involved in splicing, CAI: 0.12;
snRNPE homolog [Saccharomyces cerevisiae]
gi|1420395|emb|CAA99365.1| SME1 [Saccharomyces cerevisiae]
gi|1694906|emb|CAA63198.1| core snRNP protein E [Saccharomyces cerevisiae]
gi|45269948|gb|AAS56355.1| YOR159C [Saccharomyces cerevisiae]
gi|151945777|gb|EDN64018.1| Sm E [Saccharomyces cerevisiae YJM789]
gi|190407477|gb|EDV10744.1| small nuclear ribonucleoprotein E [Saccharomyces cerevisiae
RM11-1a]
gi|256272778|gb|EEU07749.1| Sme1p [Saccharomyces cerevisiae JAY291]
gi|259149642|emb|CAY86446.1| Sme1p [Saccharomyces cerevisiae EC1118]
gi|285815039|tpg|DAA10932.1| TPA: Sme1p [Saccharomyces cerevisiae S288c]
gi|349581316|dbj|GAA26474.1| K7_Sme1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296487|gb|EIW07589.1| Sme1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 94
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 8 FSFRNSQTTLMLFCFWALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKA 67
F+F QT + + W E I +++ G++ FD N+V++ E+ + GK+
Sbjct: 18 FNFLQQQTPVTI---WLFEQIGIRIKGKIVGFDEFMNVVIDEAVEIPV---NSADGKED- 70
Query: 68 LPVNKDRFISKMFLRGDSVIIV 89
V K + K+ L+GD++ ++
Sbjct: 71 --VEKGTPLGKILLKGDNITLI 90
>gi|388851843|emb|CCF54437.1| probable LSM3-U6 snRNA-associated Sm-like protein [Ustilago hordei]
Length = 109
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 31 QLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIV 89
+L G + A+D H N++L +V E + + K+ + V K R +F+RGDSVI+V
Sbjct: 46 ELRGTLHAYDGHMNLILGDVEETIYVVDINEETGKETVRVVK-RQSEMLFVRGDSVILV 103
>gi|393243225|gb|EJD50740.1| Sm-like ribonucleo protein [Auricularia delicata TFB-10046 SS5]
Length = 183
Score = 34.3 bits (77), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 32 LLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKD---RFISKMFLRGDSVI 87
L+G + AFDRH N+VL + E PK G+ P + R + + LRG++V+
Sbjct: 29 LVGHMLAFDRHMNLVLADCEEFRRVRPKKKAGESSEGPAPEQEIKRTLGLVILRGETVV 87
>gi|392574635|gb|EIW67771.1| hypothetical protein TREMEDRAFT_69713 [Tremella mesenterica DSM
1558]
Length = 93
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 4 IQIRFSFRNSQTTLMLFCFWALEFIVLQLLGRVRAFDRHCNMVLENVREMWTELPKTGKG 63
I + FS T + ++ + + EF ++ + FD N+VL+ E++ K GK
Sbjct: 11 INVIFSHLQKHTRITIWLYDSNEF---RIEAFIVGFDEFMNLVLDEAEEVYDCAAKPGK- 66
Query: 64 KKKALPVNKDRFISKMFLRGDSVIIV 89
PV R + ++ L+GD++ ++
Sbjct: 67 -----PVKPRRELGRILLKGDNITLI 87
>gi|321465034|gb|EFX76038.1| hypothetical protein DAPPUDRAFT_226183 [Daphnia pulex]
Length = 103
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 21/69 (30%)
Query: 31 QLLGRVRAFDRHCNMVLENV----------REMWTELPKTGKGKKKALPVNKDRFISKMF 80
+L GR+ A+D+H NMVL V E + E+ +T K R I +F
Sbjct: 38 ELRGRLHAYDQHLNMVLGEVEETVTTVEIDEETYEEVYRTTK-----------RNIPMLF 86
Query: 81 LRGDSVIIV 89
+RGD VI+V
Sbjct: 87 VRGDGVILV 95
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.332 0.143 0.440
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,282,364,616
Number of Sequences: 23463169
Number of extensions: 42421007
Number of successful extensions: 110168
Number of sequences better than 100.0: 756
Number of HSP's better than 100.0 without gapping: 389
Number of HSP's successfully gapped in prelim test: 367
Number of HSP's that attempted gapping in prelim test: 109350
Number of HSP's gapped (non-prelim): 756
length of query: 94
length of database: 8,064,228,071
effective HSP length: 64
effective length of query: 30
effective length of database: 6,562,585,255
effective search space: 196877557650
effective search space used: 196877557650
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 69 (31.2 bits)