Query 034465
Match_columns 94
No_of_seqs 101 out of 958
Neff 7.2
Searched_HMMs 46136
Date Fri Mar 29 03:09:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034465.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/034465hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd01959 nsLTP2 nsLTP2: Non-spe 99.8 1.5E-21 3.2E-26 115.3 4.3 66 29-94 1-66 (66)
2 cd04660 nsLTP_like nsLTP_like: 99.6 3.7E-16 8.1E-21 93.5 4.0 61 32-93 6-70 (73)
3 PF14368 LTP_2: Probable lipid 99.5 3.8E-15 8.3E-20 92.0 1.0 67 25-92 18-92 (96)
4 cd01960 nsLTP1 nsLTP1: Non-spe 99.4 1.2E-13 2.6E-18 85.2 2.5 65 28-92 2-79 (89)
5 cd00010 AAI_LTSS AAI_LTSS: Alp 99.3 7.8E-13 1.7E-17 76.4 2.8 56 34-89 1-63 (63)
6 smart00499 AAI Plant lipid tra 99.1 1.8E-10 3.9E-15 67.6 3.6 60 33-92 7-75 (79)
7 PF00234 Tryp_alpha_amyl: Prot 98.7 2.4E-10 5.3E-15 69.9 -4.7 61 33-93 14-87 (90)
8 PF14547 Hydrophob_seed: Hydro 94.9 0.01 2.2E-07 36.5 0.6 61 33-93 8-80 (85)
9 cd01958 HPS_like HPS_like: Hyd 94.6 0.045 9.8E-07 33.7 3.1 66 28-93 3-81 (85)
10 cd00261 AAI_SS AAI_SS: Alpha-A 82.9 0.45 9.7E-06 29.7 0.3 62 33-94 14-108 (110)
11 PF08194 DIM: DIM protein; In 47.3 26 0.00056 18.1 2.3 15 1-15 1-15 (36)
12 PF05617 Prolamin_like: Prolam 35.4 22 0.00049 20.1 1.1 20 45-64 26-46 (70)
13 PRK13733 conjugal transfer pro 30.1 59 0.0013 22.5 2.6 38 1-39 1-38 (171)
14 PF15284 PAGK: Phage-encoded v 20.5 1.3E+02 0.0028 17.3 2.4 15 1-15 1-15 (61)
No 1
>cd01959 nsLTP2 nsLTP2: Non-specific lipid-transfer protein type 2 (nsLTP2) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. nsLTP2 can bind lipids and sterols. Structure studies of rice nsLTPs show that the plasticity of the hydrophobic cavity is an important factor in ligand binding. The flexibility of the sLTP2 cavity allows its binding to rigid sterol molecules, whereas nsLTP1 cannot bind sterols despite its larger cavity size. The resulting nsLTP2/sterol complexes may bind to receptors that trigger defense responses. nsLTP2 gene exp
Probab=99.84 E-value=1.5e-21 Score=115.28 Aligned_cols=66 Identities=58% Similarity=1.312 Sum_probs=61.8
Q ss_pred CCccccccchhhhcCCCCCChhHHHhccccCCeecccccCccccCCCCHHHHHHHhcccCCCCCCC
Q 034465 29 CSPTQLSSCVSAITSSTPPSRLCCSKIKEQKPCLCQYLRNPSLRKFINTPNARRVASTCGTPFPKC 94 (94)
Q Consensus 29 C~~~~l~pC~~~~~~~~~Ps~~CC~~vk~~~~ClC~~~~~~~~~~~i~~~~a~~lp~~Cgv~~p~C 94 (94)
|+..+|.+|++|++++.+||.+||+.+|++++|+|+|++++++..+||.++|++|+++||+++|+|
T Consensus 1 c~~~~L~~C~~ai~~~~~Ps~~CC~~Lk~~~~CLC~y~~~p~l~~~i~~~~A~~l~~~Cgv~~P~C 66 (66)
T cd01959 1 CNPTQLSPCLPAILGGSPPSAACCAKLKEQQSCLCQYAKNPSLKQYVNSPNARKVLAACGVPYPNC 66 (66)
T ss_pred CChhhcccCHHHHhCCCCCCHHHHHHHhcCCCCeeeeecCccHHhhcCcHHHHHHHHHcCCCCCCC
Confidence 555789999999998889999999999999999999999998888899999999999999999998
No 2
>cd04660 nsLTP_like nsLTP_like: Non-specific lipid-transfer protein (nsLTP)-like subfamily; composed of predominantly uncharacterized proteins with similarity to nsLTPs, including Medicago truncatula MtN5, the root-specific Phaseolus vulgaris PVR3, Antirrhinum majus FIL1, and Lilium longiflorum LIM3. Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. The MtN5 gene is induced during root nodule development. FIL1 is thought to be important in petal and stamen formation. The LIM3 gene is induced during the early prophase stage of meiosis in lily microsporocytes.
Probab=99.62 E-value=3.7e-16 Score=93.47 Aligned_cols=61 Identities=34% Similarity=0.849 Sum_probs=52.7
Q ss_pred cccccchhhhcCCC---CCChhHHHhccccC-CeecccccCccccCCCCHHHHHHHhcccCCCCCC
Q 034465 32 TQLSSCVSAITSST---PPSRLCCSKIKEQK-PCLCQYLRNPSLRKFINTPNARRVASTCGTPFPK 93 (94)
Q Consensus 32 ~~l~pC~~~~~~~~---~Ps~~CC~~vk~~~-~ClC~~~~~~~~~~~i~~~~a~~lp~~Cgv~~p~ 93 (94)
..|.||++|++++. +|+..||+++|+.+ .|+|.+++.+.+. +||.++|++||++||+++|+
T Consensus 6 ~~L~~C~~yl~~~~~~~~Ps~~CC~~vk~~~~~C~C~~~~~~~~~-~i~~~~a~~Lp~~Cgv~~p~ 70 (73)
T cd04660 6 DLLAECQPYVTGPNPPPPPSRECCAALRRADLPCLCRYKTSLVLQ-IIDPDKAVYLPAKCGLPLPP 70 (73)
T ss_pred HHHHHHHHHHcCCCCCCCCCHHHHHHHHcCCcCCEeeccCCCccc-ccCHHHHHHHHHHcCCCCCC
Confidence 35899999999765 58899999999988 9999999655443 59999999999999999984
No 3
>PF14368 LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A 1TUK_A.
Probab=99.50 E-value=3.8e-15 Score=91.98 Aligned_cols=67 Identities=36% Similarity=0.788 Sum_probs=47.5
Q ss_pred cccCCCccccccc---hhhhcCCCCCChhHHHhcccc---C-CeecccccCcccc-CCCCHHHHHHHhcccCCCCC
Q 034465 25 VAVTCSPTQLSSC---VSAITSSTPPSRLCCSKIKEQ---K-PCLCQYLRNPSLR-KFINTPNARRVASTCGTPFP 92 (94)
Q Consensus 25 ~~~~C~~~~l~pC---~~~~~~~~~Ps~~CC~~vk~~---~-~ClC~~~~~~~~~-~~i~~~~a~~lp~~Cgv~~p 92 (94)
...+|. .++.|| ..|++++.+||.+||+++|+. + .|+|++++++.+. .+||.+++.+||++||+++|
T Consensus 18 ~~~~c~-~~l~~c~~~~~~~~~~~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~~~~~~in~~~a~~Lp~~Cg~~~~ 92 (96)
T PF14368_consen 18 CCCSCA-NSLLPCCPCLCYVTGGPAPSAACCSALKSVVQADPPCLCQLLNSPGAPGFGINVTRALALPAACGVPVP 92 (96)
T ss_dssp BTTB-H-CCCCHH--HHHHHCC-----HHHHHHHCC----HCCHHHCCCC-CCHCHHCCTCHHHHHHHHHCTSS-S
T ss_pred CcchhH-HHHhccccchhccCCCCCCCHHHHHHHHHhccCCCCCHHHhcCccccccCCcCHHHHHHHHHHcCCCCC
Confidence 334553 457777 788887779999999999993 5 9999999876633 35999999999999999987
No 4
>cd01960 nsLTP1 nsLTP1: Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. The hydrophobic cavity accommodates various fatty acid ligands containing from ten to 18 carbon atoms. In general, the cavity is larger in nsLTP1 than in nsLTP2. nsLTP1 proteins are located in extracellular layers and in vacuolar structures. They may be involved in the formation of cutin layers on plant surfaces by transporting cutin monomers. Many nsLTP1 proteins have been characterized as allergens in humans.
Probab=99.40 E-value=1.2e-13 Score=85.16 Aligned_cols=65 Identities=26% Similarity=0.610 Sum_probs=51.4
Q ss_pred CCCc--cccccchhhhcCCC-CCChhHHHhcccc--------C-CeecccccCccccC-CCCHHHHHHHhcccCCCCC
Q 034465 28 TCSP--TQLSSCVSAITSST-PPSRLCCSKIKEQ--------K-PCLCQYLRNPSLRK-FINTPNARRVASTCGTPFP 92 (94)
Q Consensus 28 ~C~~--~~l~pC~~~~~~~~-~Ps~~CC~~vk~~--------~-~ClC~~~~~~~~~~-~i~~~~a~~lp~~Cgv~~p 92 (94)
+|.. ..|.||++|++++. +|+++||+++++. + .|+|+++++..... .||.+++.+||++||+++|
T Consensus 2 ~C~~v~~~l~~C~~y~~g~~~~Ps~~CC~~v~~l~~~~~t~~~~~~~C~C~~~~~~~~~~i~~~~a~~LP~~C~v~~~ 79 (89)
T cd01960 2 SCGQVTSLLAPCLGYLTGGGPAPSPACCSGVKSLNGLAKTTADRQAACNCLKSAAAGISGLNPGRAAGLPGKCGVSIP 79 (89)
T ss_pred CHHHHHhhHHhHHHHHhCCCCCCChHHhhhhHHHhhccCCCCchhhhhhcccccccccCCCCHHHHHhChHhcccCCC
Confidence 4665 36899999999864 8999999999982 3 57887776633332 2899999999999999965
No 5
>cd00010 AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins. Proteins in this family are known to play important roles, in defending plants from insects and pathogens, lipid transport between intracellular membranes, and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges.
Probab=99.33 E-value=7.8e-13 Score=76.40 Aligned_cols=56 Identities=34% Similarity=0.694 Sum_probs=47.1
Q ss_pred cccchhhhcCC-CCCChhHHHhcccc---C-CeecccccCccccC-CC-CHHHHHHHhcccCC
Q 034465 34 LSSCVSAITSS-TPPSRLCCSKIKEQ---K-PCLCQYLRNPSLRK-FI-NTPNARRVASTCGT 89 (94)
Q Consensus 34 l~pC~~~~~~~-~~Ps~~CC~~vk~~---~-~ClC~~~~~~~~~~-~i-~~~~a~~lp~~Cgv 89 (94)
|.||++|++++ ..|+.+||+++++. + .|+|++++++.... ++ |.+++..||++||+
T Consensus 1 L~~C~~y~~~~~~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~~~~~~~~~~~~a~~LP~~Cgv 63 (63)
T cd00010 1 LAPCLSYLTGGATAPPSDCCSGLKSVVKSDPKCLCAALNGPGASLLGLKNATRALALPAACGL 63 (63)
T ss_pred CcchHHHHcCCCCCCChHHHHHHHHHHhcChhhHHHHHcCccccccCcccHHHHHhchHhcCC
Confidence 57999999987 48999999999994 4 89999998755433 34 79999999999996
No 6
>smart00499 AAI Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family.
Probab=99.05 E-value=1.8e-10 Score=67.64 Aligned_cols=60 Identities=40% Similarity=0.832 Sum_probs=50.1
Q ss_pred ccccchhhhcCC---CCCChhHHHhcccc-C-CeecccccCccccCC----CCHHHHHHHhcccCCCCC
Q 034465 33 QLSSCVSAITSS---TPPSRLCCSKIKEQ-K-PCLCQYLRNPSLRKF----INTPNARRVASTCGTPFP 92 (94)
Q Consensus 33 ~l~pC~~~~~~~---~~Ps~~CC~~vk~~-~-~ClC~~~~~~~~~~~----i~~~~a~~lp~~Cgv~~p 92 (94)
++.+|.+|++++ ..|+.+||++++.. + .|+|..+........ ++..++..||+.||++++
T Consensus 7 ~~~~c~~~~~~~~~~~~p~~~CC~~l~~~~~~~C~C~~~~~~~~~~~~~~~~~~~~a~~lp~~C~~~~~ 75 (79)
T smart00499 7 QLAPCLSYLTGGSPGAPPSQQCCSQLRGLNSAQCRCLALRAAVLGILEIPGVNAQNAASLPSACGVPPP 75 (79)
T ss_pred hHHhhHHHHcCCCCCCCCchHHHHHHHHhcccCCcchhhhcccccccchhhhhHHHHHhhHHhcCCCCC
Confidence 456999999976 37889999999999 7 999999866444332 489999999999999987
No 7
>PF00234 Tryp_alpha_amyl: Protease inhibitor/seed storage/LTP family This is a small subfamily; InterPro: IPR003612 This domain is found is several proteins, including plant lipid transfer proteins [], seed storage proteins [] and trypsin-alpha amylase inhibitors [, ]. The domain forms a four-helical bundle in a right-handed superhelix with a folded leaf topology, which is stabilised by disulphide bonds, and which has an internal cavity. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; PDB: 1BFA_A 1BEA_A 1MID_A 1BE2_A 1LIP_A 3GSH_A 1JTB_A 1UVC_B 1BV2_A 1UVB_A ....
Probab=98.70 E-value=2.4e-10 Score=69.91 Aligned_cols=61 Identities=25% Similarity=0.588 Sum_probs=51.2
Q ss_pred ccccchhhhcCCC-CCChhHHHhccccC-CeecccccCcccc-----------CCCCHHHHHHHhcccCCCCCC
Q 034465 33 QLSSCVSAITSST-PPSRLCCSKIKEQK-PCLCQYLRNPSLR-----------KFINTPNARRVASTCGTPFPK 93 (94)
Q Consensus 33 ~l~pC~~~~~~~~-~Ps~~CC~~vk~~~-~ClC~~~~~~~~~-----------~~i~~~~a~~lp~~Cgv~~p~ 93 (94)
.+.+|.+|++++. .|+.+||+++++.+ .|.|..++..... ..++..+|..||+.||+++|.
T Consensus 14 ~l~~c~~~~~~~~~~~~~~CC~~L~~l~~~C~C~~i~~~~~~~~~q~~~~~~~~~~~~~~a~~LP~~C~v~~~~ 87 (90)
T PF00234_consen 14 RLSPCLPYLQGGCQQPSQQCCQQLRQLDPQCRCEAIRQMVRQVIQQQQQGGQEMQIMAQRAQNLPSMCNVSPPY 87 (90)
T ss_dssp HHHGGHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHCTSTCSHHHHHHHHHHHHHHHHTTSSSSS
T ss_pred cccccHHHHhcccccchHHHhHHHHHHhHHhhCHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHHCCCCCCC
Confidence 4799999999864 68899999999988 9999999653322 147888999999999999986
No 8
>PF14547 Hydrophob_seed: Hydrophobic seed protein
Probab=94.85 E-value=0.01 Score=36.50 Aligned_cols=61 Identities=28% Similarity=0.657 Sum_probs=42.3
Q ss_pred ccccchhhhc-----CCCCCChhHHHhccc---cC--CeecccccCcccc-CCCCHH-HHHHHhcccCCCCCC
Q 034465 33 QLSSCVSAIT-----SSTPPSRLCCSKIKE---QK--PCLCQYLRNPSLR-KFINTP-NARRVASTCGTPFPK 93 (94)
Q Consensus 33 ~l~pC~~~~~-----~~~~Ps~~CC~~vk~---~~--~ClC~~~~~~~~~-~~i~~~-~a~~lp~~Cgv~~p~ 93 (94)
++..|...+. .+.++..+||.-++. .+ .|+|..+|...+. ..+|.+ ....+...||...|.
T Consensus 8 kLgvC~~vL~l~~~~~g~~~~~~CC~li~gL~d~~AA~CLC~aika~vlg~i~~~ipv~l~~lln~CGk~~p~ 80 (85)
T PF14547_consen 8 KLGVCANVLGLVNLVIGNPPRQPCCSLIAGLADLDAAVCLCTAIKANVLGLINVNIPVALNLLLNACGKTVPS 80 (85)
T ss_pred hhhhhhhhhhhhccccCCCCCCCcChHHhCcccchHHHHHHHHHhhhcccccccccccHHHHHHHHhCCcCcC
Confidence 5778888771 133577889999988 23 8999988765554 222222 466788889999874
No 9
>cd01958 HPS_like HPS_like: Hydrophobic Protein from Soybean (HPS)-like subfamily; composed of proteins with similarity to HPS, a small hydrophobic protein with unknown function related to cereal-type alpha-amylase inhibitors and lipid transfer proteins. In addition to HPS, members of this subfamily include a hybrid proline-rich protein (HyPRP) from maize, a dark-inducible protein (LeDI-2) from Lithospermum erythrorhizon, maize ZRP3 protein, and rice RcC3 protein. HyPRP is an embryo-specific protein that contains an N-terminal proline-rich domain and a C-terminal HPS-like cysteine-rich domain. It has been suggested that HyPRP may be involved in the stability and defense of the developing embryo. LeDI-2 is a root-specific protein that may be involved in regulating the biosynthesis of shikonin derivatives in L. erythrorhizon. Maize ZRP3 and rice RcC3 are root-specific proteins whose functions are yet to be determined. It has been reported that ZRP3 largely accumulates in a distinct subset
Probab=94.64 E-value=0.045 Score=33.68 Aligned_cols=66 Identities=29% Similarity=0.615 Sum_probs=44.3
Q ss_pred CCCcc--ccccchhhhcC-----CCCCChhHHHhccc---cC--CeecccccCccccCCCCHHH-HHHHhcccCCCCCC
Q 034465 28 TCSPT--QLSSCVSAITS-----STPPSRLCCSKIKE---QK--PCLCQYLRNPSLRKFINTPN-ARRVASTCGTPFPK 93 (94)
Q Consensus 28 ~C~~~--~l~pC~~~~~~-----~~~Ps~~CC~~vk~---~~--~ClC~~~~~~~~~~~i~~~~-a~~lp~~Cgv~~p~ 93 (94)
+|..+ ++..|..-+.. +.+|..+||.-++. .| .|+|..+|.+.+...+|.+- ..-+...||...|.
T Consensus 3 ~CP~dalkLgvCanvL~l~~~~~g~~~~~~CC~ll~GL~dldAA~CLCtaikan~lgi~~~~pv~l~llln~CGk~~P~ 81 (85)
T cd01958 3 TCPRDALKLGVCANVLGLSLLLLGTPAVQPCCPLIGGLADLDAAVCLCTAIKANILGISINIPVALSLLLNSCGRNVPP 81 (85)
T ss_pred CCCcchHHhchhHhhhhccccccCCCccchHHHHHcCchhhheeeeeeeeeeccccCcccccChhHHHHHHHHcCcCCC
Confidence 45553 56778776632 34677899999888 23 89999998755543333333 55566689999874
No 10
>cd00261 AAI_SS AAI_SS: Alpha-Amylase Inhibitors (AAIs) and Seed Storage (SS) Protein subfamily; composed of cereal-type AAIs and SS proteins. They are mainly present in the seeds of a variety of plants. AAIs play an important role in the natural defenses of plants against insects and pathogens such as fungi, bacteria and viruses. AAIs impede the digestion of plant starch and proteins by inhibiting digestive alpha-amylases and proteinases. Also included in this subfamily are SS proteins such as 2S albumin, gamma-gliadin, napin, and prolamin. These AAIs and SS proteins are also known allergens in humans.
Probab=82.88 E-value=0.45 Score=29.72 Aligned_cols=62 Identities=23% Similarity=0.479 Sum_probs=41.3
Q ss_pred ccccchhhhcCC---CC------------CChhHHHhccccC-CeecccccC---ccc----------cC---CCCHHHH
Q 034465 33 QLSSCVSAITSS---TP------------PSRLCCSKIKEQK-PCLCQYLRN---PSL----------RK---FINTPNA 80 (94)
Q Consensus 33 ~l~pC~~~~~~~---~~------------Ps~~CC~~vk~~~-~ClC~~~~~---~~~----------~~---~i~~~~a 80 (94)
.|.+|..|+... .. ....||+.++..+ .|.|..+.. ... .. ..-...|
T Consensus 14 ~L~~C~~yl~qq~~~~~~~~~~~~~~~~~~~qqCCqqL~~i~~qcrC~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 93 (110)
T cd00261 14 PLNSCREYLRQQCSGVGGPPVWPQQSCEVLRQQCCQQLAQIPEQCRCEALRQMVQGVIQQQQQQQEQQQGQEVERMRQAA 93 (110)
T ss_pred cCcHHHHHHHHhccCCCCCCCcCccccHHHHHHHHHHHHhCcHhhhHHHHHHHHHHHHHhhhccccccCcChHHHHHHHH
Confidence 478898888631 10 1257999999988 999988842 000 00 1233468
Q ss_pred HHHhcccCCCC-CCC
Q 034465 81 RRVASTCGTPF-PKC 94 (94)
Q Consensus 81 ~~lp~~Cgv~~-p~C 94 (94)
..||..||+.. +.|
T Consensus 94 ~~Lp~~C~~~~~~~C 108 (110)
T cd00261 94 QNLPSMCNLYPPPYC 108 (110)
T ss_pred HhhchhcCCCCCCCC
Confidence 99999999987 545
No 11
>PF08194 DIM: DIM protein; InterPro: IPR013172 Drosophila immune-induced molecules (DIMs) are short proteins induced during the immune response of Drosophila []. This entry includes DIMs 1 to 4 and DIM23.
Probab=47.34 E-value=26 Score=18.11 Aligned_cols=15 Identities=27% Similarity=0.266 Sum_probs=7.6
Q ss_pred CcchHHHHHHHHHHH
Q 034465 1 MEASHVAAICTLVVL 15 (94)
Q Consensus 1 m~~~~~~~~~~~~~l 15 (94)
||-...+.+++++.+
T Consensus 1 Mk~l~~a~~l~lLal 15 (36)
T PF08194_consen 1 MKCLSLAFALLLLAL 15 (36)
T ss_pred CceeHHHHHHHHHHH
Confidence 666554344444444
No 12
>PF05617 Prolamin_like: Prolamin-like; InterPro: IPR008502 This entry consists of several proteins of unknown function found exclusively in Arabidopsis thaliana.
Probab=35.43 E-value=22 Score=20.08 Aligned_cols=20 Identities=20% Similarity=0.426 Sum_probs=16.9
Q ss_pred CCCChhHHHhccccC-Ceecc
Q 034465 45 TPPSRLCCSKIKEQK-PCLCQ 64 (94)
Q Consensus 45 ~~Ps~~CC~~vk~~~-~ClC~ 64 (94)
...+++||.++.+.+ .|.=.
T Consensus 26 ~~i~~~CC~~i~~~g~~C~~~ 46 (70)
T PF05617_consen 26 KNIGPECCKAINKMGKDCHPA 46 (70)
T ss_pred CCCChHHHHHHHHHhHhHHHH
Confidence 478899999999976 88876
No 13
>PRK13733 conjugal transfer protein TraV; Provisional
Probab=30.07 E-value=59 Score=22.49 Aligned_cols=38 Identities=21% Similarity=0.348 Sum_probs=19.4
Q ss_pred CcchHHHHHHHHHHHHHhhccccccccCCCccccccchh
Q 034465 1 MEASHVAAICTLVVLLLAAETQVSVAVTCSPTQLSSCVS 39 (94)
Q Consensus 1 m~~~~~~~~~~~~~ll~~~~~~~~~~~~C~~~~l~pC~~ 39 (94)
||.+..++.+ +..|++++=++-...++|+...-..|+.
T Consensus 1 MK~~~~li~l-~~~LlL~GCAg~~s~f~C~~t~sdqcls 38 (171)
T PRK13733 1 MKQISLLIPL-LGTLLLSGCAGTNSEFECNATTSDTCMT 38 (171)
T ss_pred CchhhHHHHH-HHHHHhccccCCCCCCCCCCCCCcceee
Confidence 7755433333 4444455534344457898743344443
No 14
>PF15284 PAGK: Phage-encoded virulence factor
Probab=20.54 E-value=1.3e+02 Score=17.34 Aligned_cols=15 Identities=13% Similarity=0.219 Sum_probs=7.7
Q ss_pred CcchHHHHHHHHHHH
Q 034465 1 MEASHVAAICTLVVL 15 (94)
Q Consensus 1 m~~~~~~~~~~~~~l 15 (94)
||-...+.+.++++|
T Consensus 1 Mkk~ksifL~l~~~L 15 (61)
T PF15284_consen 1 MKKFKSIFLALVFIL 15 (61)
T ss_pred ChHHHHHHHHHHHHH
Confidence 665554444444444
Done!