BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034469
(94 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4EO3|A Chain A, Peroxiredoxin Nitroreductase Fusion Enzyme
pdb|4EO3|B Chain B, Peroxiredoxin Nitroreductase Fusion Enzyme
Length = 322
Score = 30.4 bits (67), Expect = 0.24, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 8 GMEKMSVEQLKAIKEQTDLEVNLLQDSLNNIRTATSRLESAST 50
G+ + SVE LK KE+ DL+V LL D + + LE+ T
Sbjct: 59 GISRDSVEALKRFKEKNDLKVTLLSDPEGILHEFFNVLENGKT 101
>pdb|3SLA|A Chain A, X-Ray Structure Of First Four Repeats Of Human
Beta-Catenin
pdb|3SLA|B Chain B, X-Ray Structure Of First Four Repeats Of Human
Beta-Catenin
pdb|3SLA|C Chain C, X-Ray Structure Of First Four Repeats Of Human
Beta-Catenin
pdb|3SLA|D Chain D, X-Ray Structure Of First Four Repeats Of Human
Beta-Catenin
pdb|3SLA|E Chain E, X-Ray Structure Of First Four Repeats Of Human
Beta-Catenin
Length = 168
Score = 25.8 bits (55), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 17/30 (56%)
Query: 43 SRLESASTALHDLSLRPQGAKMLVPLTASL 72
S L A T LH+L L +GAKM V L L
Sbjct: 112 SVLFYAITTLHNLLLHQEGAKMAVRLAGGL 141
>pdb|3SL9|A Chain A, X-Ray Structure Of Beta Catenin In Complex With Bcl9
pdb|3SL9|B Chain B, X-Ray Structure Of Beta Catenin In Complex With Bcl9
pdb|3SL9|E Chain E, X-Ray Structure Of Beta Catenin In Complex With Bcl9
pdb|3SL9|G Chain G, X-Ray Structure Of Beta Catenin In Complex With Bcl9
Length = 167
Score = 25.8 bits (55), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 17/30 (56%)
Query: 43 SRLESASTALHDLSLRPQGAKMLVPLTASL 72
S L A T LH+L L +GAKM V L L
Sbjct: 112 SVLFYAITTLHNLLLHQEGAKMAVRLAGGL 141
>pdb|1TJU|A Chain A, Crystal Structure Of T161s Duck Delta 2 Crystallin Mutant
pdb|1TJU|B Chain B, Crystal Structure Of T161s Duck Delta 2 Crystallin Mutant
pdb|1TJU|C Chain C, Crystal Structure Of T161s Duck Delta 2 Crystallin Mutant
pdb|1TJU|D Chain D, Crystal Structure Of T161s Duck Delta 2 Crystallin Mutant
Length = 474
Score = 25.8 bits (55), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 27/43 (62%)
Query: 1 MASSKGGGMEKMSVEQLKAIKEQTDLEVNLLQDSLNNIRTATS 43
+A +KG + K+S+E LK+I Q +V+ + + +N++ T+
Sbjct: 399 LAETKGITINKLSLEDLKSISPQFSSDVSQVFNFVNSVEQYTA 441
>pdb|1HY1|A Chain A, Crystal Structure Of Wild Type Duck Delta 2 Crystallin
(Eye Lens Protein)
pdb|1HY1|B Chain B, Crystal Structure Of Wild Type Duck Delta 2 Crystallin
(Eye Lens Protein)
pdb|1HY1|C Chain C, Crystal Structure Of Wild Type Duck Delta 2 Crystallin
(Eye Lens Protein)
pdb|1HY1|D Chain D, Crystal Structure Of Wild Type Duck Delta 2 Crystallin
(Eye Lens Protein)
Length = 468
Score = 25.8 bits (55), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 27/43 (62%)
Query: 1 MASSKGGGMEKMSVEQLKAIKEQTDLEVNLLQDSLNNIRTATS 43
+A +KG + K+S+E LK+I Q +V+ + + +N++ T+
Sbjct: 399 LAETKGITINKLSLEDLKSISPQFSSDVSQVFNFVNSVEQYTA 441
>pdb|1TJV|A Chain A, Crystal Structure Of T161d Duck Delta 2 Crystallin Mutant
pdb|1TJV|B Chain B, Crystal Structure Of T161d Duck Delta 2 Crystallin Mutant
pdb|1TJV|C Chain C, Crystal Structure Of T161d Duck Delta 2 Crystallin Mutant
pdb|1TJV|D Chain D, Crystal Structure Of T161d Duck Delta 2 Crystallin Mutant
pdb|1TJW|A Chain A, Crystal Structure Of T161d Duck Delta 2 Crystallin Mutant
With Bound Argininosuccinate
pdb|1TJW|B Chain B, Crystal Structure Of T161d Duck Delta 2 Crystallin Mutant
With Bound Argininosuccinate
pdb|1TJW|C Chain C, Crystal Structure Of T161d Duck Delta 2 Crystallin Mutant
With Bound Argininosuccinate
pdb|1TJW|D Chain D, Crystal Structure Of T161d Duck Delta 2 Crystallin Mutant
With Bound Argininosuccinate
Length = 474
Score = 25.8 bits (55), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 27/43 (62%)
Query: 1 MASSKGGGMEKMSVEQLKAIKEQTDLEVNLLQDSLNNIRTATS 43
+A +KG + K+S+E LK+I Q +V+ + + +N++ T+
Sbjct: 399 LAETKGITINKLSLEDLKSISPQFSSDVSQVFNFVNSVEQYTA 441
>pdb|1K7W|A Chain A, Crystal Structure Of S283a Duck Delta 2 Crystallin Mutant
pdb|1K7W|B Chain B, Crystal Structure Of S283a Duck Delta 2 Crystallin Mutant
pdb|1K7W|C Chain C, Crystal Structure Of S283a Duck Delta 2 Crystallin Mutant
pdb|1K7W|D Chain D, Crystal Structure Of S283a Duck Delta 2 Crystallin Mutant
Length = 468
Score = 25.8 bits (55), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 27/43 (62%)
Query: 1 MASSKGGGMEKMSVEQLKAIKEQTDLEVNLLQDSLNNIRTATS 43
+A +KG + K+S+E LK+I Q +V+ + + +N++ T+
Sbjct: 399 LAETKGITINKLSLEDLKSISPQFSSDVSQVFNFVNSVEQYTA 441
>pdb|1AUW|A Chain A, H91n Delta 2 Crystallin From Duck
pdb|1AUW|B Chain B, H91n Delta 2 Crystallin From Duck
pdb|1AUW|C Chain C, H91n Delta 2 Crystallin From Duck
pdb|1AUW|D Chain D, H91n Delta 2 Crystallin From Duck
Length = 468
Score = 25.8 bits (55), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 27/43 (62%)
Query: 1 MASSKGGGMEKMSVEQLKAIKEQTDLEVNLLQDSLNNIRTATS 43
+A +KG + K+S+E LK+I Q +V+ + + +N++ T+
Sbjct: 399 LAETKGITINKLSLEDLKSISPQFSSDVSQVFNFVNSVEQYTA 441
>pdb|1QZ7|A Chain A, Beta-Catenin Binding Domain Of Axin In Complex With Beta-
Catenin
Length = 533
Score = 25.8 bits (55), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 17/30 (56%)
Query: 43 SRLESASTALHDLSLRPQGAKMLVPLTASL 72
S L A T LH+L L +GAKM V L L
Sbjct: 118 SVLFYAITTLHNLLLHQEGAKMAVRLAGGL 147
>pdb|1G3J|A Chain A, Crystal Structure Of The Xtcf3-CbdBETA-Catenin Armadillo
Repeat Complex
pdb|1G3J|C Chain C, Crystal Structure Of The Xtcf3-CbdBETA-Catenin Armadillo
Repeat Complex
pdb|1TH1|A Chain A, Beta-Catenin In Complex With A Phosphorylated Apc 20aa
Repeat Fragment
pdb|1TH1|B Chain B, Beta-Catenin In Complex With A Phosphorylated Apc 20aa
Repeat Fragment
Length = 532
Score = 25.8 bits (55), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 17/30 (56%)
Query: 43 SRLESASTALHDLSLRPQGAKMLVPLTASL 72
S L A T LH+L L +GAKM V L L
Sbjct: 118 SVLFYAITTLHNLLLHQEGAKMAVRLAGGL 147
>pdb|1I7X|A Chain A, Beta-CateninE-Cadherin Complex
pdb|1I7X|C Chain C, Beta-CateninE-Cadherin Complex
pdb|1I7W|A Chain A, Beta-CateninPHOSPHORYLATED E-Cadherin Complex
pdb|1I7W|C Chain C, Beta-CateninPHOSPHORYLATED E-Cadherin Complex
pdb|1JPP|A Chain A, The Structure Of A Beta-Catenin Binding Repeat From
Adenomatous Polyposis Coli (Apc) In Complex With
Beta-Catenin
pdb|1JPP|B Chain B, The Structure Of A Beta-Catenin Binding Repeat From
Adenomatous Polyposis Coli (Apc) In Complex With
Beta-Catenin
pdb|1M1E|A Chain A, Beta-Catenin Armadillo Repeat Domain Bound To Icat
pdb|1V18|A Chain A, The Crystal Structure Of Beta-Catenin Armadillo Repeat
Complexed With A Phosphorylated Apc 20mer Repeat
Length = 538
Score = 25.8 bits (55), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 17/30 (56%)
Query: 43 SRLESASTALHDLSLRPQGAKMLVPLTASL 72
S L A T LH+L L +GAKM V L L
Sbjct: 117 SVLFYAITTLHNLLLHQEGAKMAVRLAGGL 146
>pdb|1JDH|A Chain A, Crystal Structure Of Beta-Catenin And Htcf-4
Length = 529
Score = 25.8 bits (55), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 17/30 (56%)
Query: 43 SRLESASTALHDLSLRPQGAKMLVPLTASL 72
S L A T LH+L L +GAKM V L L
Sbjct: 116 SVLFYAITTLHNLLLHQEGAKMAVRLAGGL 145
>pdb|1JPW|A Chain A, Crystal Structure Of A Human Tcf-4 BETA-Catenin Complex
pdb|1JPW|B Chain B, Crystal Structure Of A Human Tcf-4 BETA-Catenin Complex
pdb|1JPW|C Chain C, Crystal Structure Of A Human Tcf-4 BETA-Catenin Complex
Length = 540
Score = 25.8 bits (55), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 17/30 (56%)
Query: 43 SRLESASTALHDLSLRPQGAKMLVPLTASL 72
S L A T LH+L L +GAKM V L L
Sbjct: 120 SVLFYAITTLHNLLLHQEGAKMAVRLAGGL 149
>pdb|3OUW|A Chain A, Structure Of Beta-Catenin With Lef-1
pdb|3OUX|A Chain A, Structure Of Beta-Catenin With Phosphorylated Lef-1
Length = 540
Score = 25.8 bits (55), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 17/30 (56%)
Query: 43 SRLESASTALHDLSLRPQGAKMLVPLTASL 72
S L A T LH+L L +GAKM V L L
Sbjct: 119 SVLFYAITTLHNLLLHQEGAKMAVRLAGGL 148
>pdb|3TX7|A Chain A, Crystal Structure Of Lrh-1BETA-Catenin Complex
Length = 527
Score = 25.8 bits (55), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 17/30 (56%)
Query: 43 SRLESASTALHDLSLRPQGAKMLVPLTASL 72
S L A T LH+L L +GAKM V L L
Sbjct: 114 SVLFYAITTLHNLLLHQEGAKMAVRLAGGL 143
>pdb|2BCT|A Chain A, The Armadillo Repeat Region From Murine Beta-Catenin
Length = 516
Score = 25.8 bits (55), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 17/30 (56%)
Query: 43 SRLESASTALHDLSLRPQGAKMLVPLTASL 72
S L A T LH+L L +GAKM V L L
Sbjct: 101 SVLFYAITTLHNLLLHQEGAKMAVRLAGGL 130
>pdb|4DJS|A Chain A, Structure Of Beta-Catenin In Complex With A Stapled
Peptide Inhibitor
Length = 518
Score = 25.8 bits (55), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 17/30 (56%)
Query: 43 SRLESASTALHDLSLRPQGAKMLVPLTASL 72
S L A T LH+L L +GAKM V L L
Sbjct: 103 SVLFYAITTLHNLLLHQEGAKMAVRLAGGL 132
>pdb|2GL7|A Chain A, Crystal Structure Of A Beta-CateninBCL9TCF4 COMPLEX
pdb|2GL7|D Chain D, Crystal Structure Of A Beta-CateninBCL9TCF4 COMPLEX
Length = 550
Score = 25.8 bits (55), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 17/30 (56%)
Query: 43 SRLESASTALHDLSLRPQGAKMLVPLTASL 72
S L A T LH+L L +GAKM V L L
Sbjct: 114 SVLFYAITTLHNLLLHQEGAKMAVRLAGGL 143
>pdb|2Z6G|A Chain A, Crystal Structure Of A Full-Length Zebrafish Beta-Catenin
Length = 780
Score = 25.4 bits (54), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 17/30 (56%)
Query: 43 SRLESASTALHDLSLRPQGAKMLVPLTASL 72
S L A T LH+L L +GAKM V L L
Sbjct: 249 SVLFHAITTLHNLLLHQEGAKMAVRLAGGL 278
>pdb|1T08|A Chain A, Crystal Structure Of Beta-CateninICAT HELICAL
DomainUNPHOSPHORYLATED APC R3
Length = 519
Score = 25.4 bits (54), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 17/30 (56%)
Query: 43 SRLESASTALHDLSLRPQGAKMLVPLTASL 72
S L A T LH+L L +GAKM V L L
Sbjct: 105 SVLFYAITTLHNLLLHQEGAKMAVRLAGGL 134
>pdb|1LUJ|A Chain A, Crystal Structure Of The Beta-CateninICAT COMPLEX
Length = 514
Score = 25.4 bits (54), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 17/30 (56%)
Query: 43 SRLESASTALHDLSLRPQGAKMLVPLTASL 72
S L A T LH+L L +GAKM V L L
Sbjct: 101 SVLFYAITTLHNLLLHQEGAKMAVRLAGGL 130
>pdb|2Z6H|A Chain A, Crystal Structure Of Beta-Catenin Armadillo Repeat Region
And Its C-Terminal Domain
Length = 644
Score = 25.4 bits (54), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 17/30 (56%)
Query: 43 SRLESASTALHDLSLRPQGAKMLVPLTASL 72
S L A T LH+L L +GAKM V L L
Sbjct: 113 SVLFYAITTLHNLLLHQEGAKMAVRLAGGL 142
>pdb|3F65|A Chain A, The F4 Fimbrial Chaperone Faee Does Not Self-Cap Its
Interactive Surfaces
pdb|3F65|B Chain B, The F4 Fimbrial Chaperone Faee Does Not Self-Cap Its
Interactive Surfaces
pdb|3F65|C Chain C, The F4 Fimbrial Chaperone Faee Does Not Self-Cap Its
Interactive Surfaces
pdb|3F65|D Chain D, The F4 Fimbrial Chaperone Faee Does Not Self-Cap Its
Interactive Surfaces
pdb|3F65|E Chain E, The F4 Fimbrial Chaperone Faee Does Not Self-Cap Its
Interactive Surfaces
pdb|3F65|F Chain F, The F4 Fimbrial Chaperone Faee Does Not Self-Cap Its
Interactive Surfaces
pdb|3F65|G Chain G, The F4 Fimbrial Chaperone Faee Does Not Self-Cap Its
Interactive Surfaces
pdb|3F65|H Chain H, The F4 Fimbrial Chaperone Faee Does Not Self-Cap Its
Interactive Surfaces
pdb|3F6L|A Chain A, Structure Of The F4 Fimbrial Chaperone Faee
pdb|3F6L|B Chain B, Structure Of The F4 Fimbrial Chaperone Faee
Length = 224
Score = 25.4 bits (54), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 45 LESASTALHDLSL--RPQGAKMLVPLTASLYVPGTLDD--ARKVLVDIGT 90
LE A +SL RP G MLV T ++ G+L D +K+ D GT
Sbjct: 117 LEGRKGAEEGISLQSRPDGRTMLVNTTPYIFAIGSLLDGNGKKIATDNGT 166
>pdb|3GEW|B Chain B, Faee-Faeg Chaperone-Major Pilin Complex Of F4 Ad Fimbriae
pdb|3GEW|C Chain C, Faee-Faeg Chaperone-Major Pilin Complex Of F4 Ad Fimbriae
pdb|3GFU|C Chain C, Faee-Faeg Chaperone-Major Pilin Complex Of F4 Ac 595
Fimbriae
pdb|3GFU|A Chain A, Faee-Faeg Chaperone-Major Pilin Complex Of F4 Ac 595
Fimbriae
Length = 224
Score = 25.4 bits (54), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 45 LESASTALHDLSL--RPQGAKMLVPLTASLYVPGTLDD--ARKVLVDIGT 90
LE A +SL RP G MLV T ++ G+L D +K+ D GT
Sbjct: 117 LEGRKGAEEGISLQSRPDGRTMLVNTTPYIFAIGSLLDGNGKKIATDNGT 166
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.309 0.127 0.329
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,251,907
Number of Sequences: 62578
Number of extensions: 63703
Number of successful extensions: 186
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 164
Number of HSP's gapped (non-prelim): 25
length of query: 94
length of database: 14,973,337
effective HSP length: 61
effective length of query: 33
effective length of database: 11,156,079
effective search space: 368150607
effective search space used: 368150607
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 45 (21.9 bits)