Query 034470
Match_columns 94
No_of_seqs 108 out of 818
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 04:37:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034470.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034470hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dxp_A Putative acyl-COA dehyd 99.4 4.2E-13 1.4E-17 98.8 7.3 78 9-93 12-91 (359)
2 3mes_A Choline kinase; malaria 98.9 2E-09 6.8E-14 83.2 7.6 77 16-94 47-129 (424)
3 3ats_A Putative uncharacterize 98.8 1.4E-08 4.8E-13 74.3 6.7 72 20-93 3-82 (357)
4 3g15_A CK, chetk-alpha, cholin 98.6 2.4E-08 8.1E-13 75.5 4.4 71 22-92 34-111 (401)
5 3feg_A Choline/ethanolamine ki 98.5 7E-08 2.4E-12 73.5 3.0 71 21-93 31-108 (379)
6 4gkh_A Aminoglycoside 3'-phosp 98.4 7.2E-08 2.5E-12 67.6 1.6 69 12-93 5-74 (272)
7 3jr1_A Putative fructosamine-3 98.4 1.8E-07 6E-12 69.5 3.3 65 18-93 19-83 (312)
8 3ovc_A Hygromycin-B 4-O-kinase 98.3 4.6E-07 1.6E-11 67.8 4.9 62 16-93 25-86 (362)
9 3f7w_A Putative fructosamine-3 98.2 1.9E-06 6.4E-11 61.6 5.5 64 22-94 4-67 (288)
10 3sg8_A APH(2'')-ID; antibiotic 98.1 5.9E-07 2E-11 64.6 0.9 63 17-93 3-65 (304)
11 3d1u_A Putative fructosamine-3 97.9 1.5E-05 5.2E-10 57.9 5.2 63 22-93 4-66 (288)
12 3tdw_A Gentamicin resistance p 97.9 6.4E-06 2.2E-10 59.8 2.7 61 19-93 4-64 (306)
13 3c5i_A Choline kinase; choline 97.7 3.8E-05 1.3E-09 56.5 5.2 76 16-93 10-92 (369)
14 2q83_A YTAA protein; 2635576, 97.5 9.2E-05 3.1E-09 52.7 4.5 65 15-93 14-78 (346)
15 2ppq_A HSK, HK, homoserine kin 97.5 0.00021 7E-09 51.1 6.4 66 16-93 5-70 (322)
16 3csv_A Aminoglycoside phosphot 97.4 0.00032 1.1E-08 50.6 5.8 59 21-93 7-67 (333)
17 2qg7_A Ethanolamine kinase PV0 97.3 0.00022 7.4E-09 55.3 4.8 51 39-93 109-159 (458)
18 3i1a_A Spectinomycin phosphotr 97.2 0.00047 1.6E-08 50.7 5.0 61 17-93 5-67 (339)
19 2olc_A MTR kinase, methylthior 97.2 0.00094 3.2E-08 49.4 6.6 72 16-93 10-89 (397)
20 3f2s_A CK, chetk-alpha, cholin 97.1 0.00044 1.5E-08 53.1 4.6 68 20-87 32-111 (401)
21 1nw1_A Choline kinase (49.2 KD 96.7 0.0018 6.2E-08 49.3 4.5 52 39-93 74-130 (429)
22 2pyw_A Uncharacterized protein 96.6 0.0024 8.1E-08 47.9 4.7 54 17-75 8-67 (420)
23 3dxq_A Choline/ethanolamine ki 96.6 0.0011 3.6E-08 47.4 2.5 41 43-93 23-63 (301)
24 1zyl_A Hypothetical protein YI 96.3 0.0073 2.5E-07 43.1 5.6 67 16-93 9-75 (328)
25 3r70_A Aminoglycoside phosphot 95.9 0.00087 3E-08 48.4 -0.9 43 41-93 40-82 (320)
26 1nd4_A Aminoglycoside 3'-phosp 95.8 0.013 4.3E-07 39.7 4.6 46 41-93 22-68 (264)
27 3tm0_A Aminoglycoside 3'-phosp 95.8 0.0078 2.7E-07 41.5 3.6 44 45-93 21-64 (263)
28 3kxy_T EXSE; type-three secret 38.0 38 0.0013 19.1 3.2 23 11-33 17-39 (66)
29 3qd2_B Eukaryotic translation 31.4 51 0.0018 22.3 3.7 48 43-93 11-59 (332)
30 1byg_A CSK, protein (C-termina 28.7 90 0.0031 20.7 4.5 44 43-93 26-69 (278)
31 3is5_A Calcium-dependent prote 27.4 42 0.0014 22.6 2.7 49 43-93 27-75 (285)
32 3eqc_A Dual specificity mitoge 22.3 1.3E+02 0.0043 20.9 4.5 69 21-93 15-86 (360)
33 3kmu_A ILK, integrin-linked ki 21.7 72 0.0025 20.8 2.9 48 42-93 14-62 (271)
34 4e5w_A Tyrosine-protein kinase 21.4 99 0.0034 20.6 3.6 51 43-93 26-78 (302)
35 3a7i_A MST3 kinase, serine/thr 20.9 96 0.0033 20.8 3.5 50 42-93 26-75 (303)
36 3uim_A Brassinosteroid insensi 20.6 93 0.0032 21.1 3.4 48 43-93 35-82 (326)
37 3ro3_B Minsc, peptide of prote 20.5 55 0.0019 14.9 1.4 13 17-29 4-16 (22)
38 4f0f_A Serine/threonine-protei 20.3 1.9E+02 0.0066 19.0 5.5 51 40-93 20-78 (287)
No 1
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.41 E-value=4.2e-13 Score=98.85 Aligned_cols=78 Identities=38% Similarity=0.666 Sum_probs=54.7
Q ss_pred CcCCCCCCcCCHHHHHHHHhhhCCCCCCCCCceeEeeeCCCcccceEEEEeCCCcceeeEEEeCCC--CCCCCCCccchh
Q 034470 9 VSPFQPAHQLDLDALLRYASVNVSDFPRSPSKFTISQFGHGQSNPTFLMEVGSGAAVKRYVLRKKP--AGKLLESAHAVD 86 (94)
Q Consensus 9 ~~~~~~~~~~d~~~L~~wL~~~l~~~~~~~~~~~~~~~~~G~SN~T~~l~~~~g~~~~~~VLRr~P--~g~~~~~ahdl~ 86 (94)
+.+++....+|.++|.+||.+++++.. ++++++++++|+||.+|+++.++ ..+|||++| .+...++.|++.
T Consensus 12 ~~~~~~~~~ld~~~l~~~l~~~~~~~~---~~~~~~~l~~G~sn~~y~v~~~~----~~~vlr~~~~p~~~~~~~~~~~~ 84 (359)
T 3dxp_A 12 TRPVADQQRFDTEALEAWMRQHVEGFA---GPLSVEQFKGGQSNPTFKLVTPG----QTYVMRAKPGPKSKLLPSAHAIE 84 (359)
T ss_dssp --------CCCHHHHHHHHHHHSTTCC---CCCEEEECCC-CCSCEEEEECSS----CEEEEECCCC----------CHH
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCC---CCceEEEcCCcccceEEEEEECC----ceEEEEeCCCCCCCCCCcHHHHH
Confidence 346777889999999999999987643 46899999999999999999877 789999999 888888999999
Q ss_pred hhhhhhc
Q 034470 87 REFQVAS 93 (94)
Q Consensus 87 RE~rVl~ 93 (94)
||+++|+
T Consensus 85 ~E~~~l~ 91 (359)
T 3dxp_A 85 REYRVMD 91 (359)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999986
No 2
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=98.94 E-value=2e-09 Score=83.21 Aligned_cols=77 Identities=14% Similarity=0.154 Sum_probs=59.0
Q ss_pred CcCCHHHHHHHHhhhCCCCCCC-CCceeEeeeCCCcccceEEEEeCCC-cc----eeeEEEeCCCCCCCCCCccchhhhh
Q 034470 16 HQLDLDALLRYASVNVSDFPRS-PSKFTISQFGHGQSNPTFLMEVGSG-AA----VKRYVLRKKPAGKLLESAHAVDREF 89 (94)
Q Consensus 16 ~~~d~~~L~~wL~~~l~~~~~~-~~~~~~~~~~~G~SN~T~~l~~~~g-~~----~~~~VLRr~P~g~~~~~ahdl~RE~ 89 (94)
..+|.+.|..|+.+.++++.+. .+.+++++|+||.||.+|+|+.+++ .. .+.||||.++.+. ...+|..||+
T Consensus 47 ~~~d~~~l~~l~~~~~p~w~~~~~~~~~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t--~~~idR~~E~ 124 (424)
T 3mes_A 47 TITDTEIIIGICRKNIPGWKEINESYIEVKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV--GKFYDSKVEL 124 (424)
T ss_dssp ---CHHHHHHHHHHHSTTCTTCCGGGEEEEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC---CCCCHHHHH
T ss_pred cCCCHHHHHHHHHHHcCccccCCCCceEEEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc--chhcCHHHHH
Confidence 4578999999999999887532 3568999999999999999998632 11 2789999988764 4567899999
Q ss_pred hhhcC
Q 034470 90 QVASL 94 (94)
Q Consensus 90 rVl~a 94 (94)
+++++
T Consensus 125 ~~l~~ 129 (424)
T 3mes_A 125 DVFRY 129 (424)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99863
No 3
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.77 E-value=1.4e-08 Score=74.26 Aligned_cols=72 Identities=19% Similarity=0.273 Sum_probs=53.8
Q ss_pred HHHHHHHHhhhCCCCCCCCCce-eEeee-CCCcccceEEEEeC---CC-cceeeEEEeCCCCCC--CCCCccchhhhhhh
Q 034470 20 LDALLRYASVNVSDFPRSPSKF-TISQF-GHGQSNPTFLMEVG---SG-AAVKRYVLRKKPAGK--LLESAHAVDREFQV 91 (94)
Q Consensus 20 ~~~L~~wL~~~l~~~~~~~~~~-~~~~~-~~G~SN~T~~l~~~---~g-~~~~~~VLRr~P~g~--~~~~ahdl~RE~rV 91 (94)
.++|.+||.+++++..+ ..+ .++.+ ++|.||.+|+|+.. +| ..++.+|||.+|.+. ...+.+++.+|+++
T Consensus 3 ~~~l~~~l~~~~~~~~~--~~v~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~ 80 (357)
T 3ats_A 3 PAVISRWLSSVLPGGAA--PEVTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEV 80 (357)
T ss_dssp HHHHHHHHHHHSCTTCC--CEEEEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHH
T ss_pred HHHHHHHHHHhcCCcCC--CceEEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHH
Confidence 36899999999876422 123 46677 99999999999865 11 112789999999876 34457999999999
Q ss_pred hc
Q 034470 92 AS 93 (94)
Q Consensus 92 l~ 93 (94)
|+
T Consensus 81 l~ 82 (357)
T 3ats_A 81 IR 82 (357)
T ss_dssp HH
T ss_pred HH
Confidence 86
No 4
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=98.63 E-value=2.4e-08 Score=75.50 Aligned_cols=71 Identities=17% Similarity=0.092 Sum_probs=40.5
Q ss_pred HHHHHHhhhCCCC-CCC-CCceeEeeeCCCcccceEEEEeCCC-----cceeeEEEeCCCCCCCCCCccchhhhhhhh
Q 034470 22 ALLRYASVNVSDF-PRS-PSKFTISQFGHGQSNPTFLMEVGSG-----AAVKRYVLRKKPAGKLLESAHAVDREFQVA 92 (94)
Q Consensus 22 ~L~~wL~~~l~~~-~~~-~~~~~~~~~~~G~SN~T~~l~~~~g-----~~~~~~VLRr~P~g~~~~~ahdl~RE~rVl 92 (94)
+...|+++.|+|. ... .+.++|++|+||+||.||+|+..++ ...+.+|||+++.+.....+|+..+|+.++
T Consensus 34 ~a~~~c~~~l~g~W~~v~~~~l~v~~lsGG~SN~~y~v~~~~~~~~~~~~~~~~llRi~g~~~~~~~~r~~~~~~~~~ 111 (401)
T 3g15_A 34 RAYLWCKEFLPGAWRGLREDEFHISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQK 111 (401)
T ss_dssp HHHHHHHHHSCGGGTTCCGGGCEEEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------
T ss_pred HHHHHHHHhCCccccCCCcCCEEEEEeCCccccceEEEEECCCCcccccCCCeEEEEeCCCCccchhhhhHHHHHHHH
Confidence 3445788888762 221 3578999999999999999997543 122579999999999999999888777554
No 5
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=98.46 E-value=7e-08 Score=73.45 Aligned_cols=71 Identities=15% Similarity=0.212 Sum_probs=44.0
Q ss_pred HHHHHHHhhhCC-CCCCC-CCceeEeeeCCCcccceEEEEeCCC-----cceeeEEEeCCCCCCCCCCccchhhhhhhhc
Q 034470 21 DALLRYASVNVS-DFPRS-PSKFTISQFGHGQSNPTFLMEVGSG-----AAVKRYVLRKKPAGKLLESAHAVDREFQVAS 93 (94)
Q Consensus 21 ~~L~~wL~~~l~-~~~~~-~~~~~~~~~~~G~SN~T~~l~~~~g-----~~~~~~VLRr~P~g~~~~~ahdl~RE~rVl~ 93 (94)
++...|+.+-+. ..... .+++++++|+||+||.+|+|+.+++ ...+.+|||+++. ...+.|++.||+++|+
T Consensus 31 ~~~~~~~~~~l~~~W~~~~~~~l~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~--~~~~~~~~~rE~~vl~ 108 (379)
T 3feg_A 31 RRAYQWCREYLGGAWRRVQPEELRVYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA--ILQGVDSLVLESVMFA 108 (379)
T ss_dssp HHHHHHHHHHHCGGGGGCCGGGCCCEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-----CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCcCCCCCcCceEEEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC--ccchHHHHHHHHHHHH
Confidence 345556555553 22211 3568999999999999999997531 1126899999743 4578999999999986
No 6
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.40 E-value=7.2e-08 Score=67.61 Aligned_cols=69 Identities=14% Similarity=0.125 Sum_probs=44.8
Q ss_pred CCCCCcCCHHHHHHHHhhhCCCCCCCCCceeEeeeCCCcccc-eEEEEeCCCcceeeEEEeCCCCCCCCCCccchhhhhh
Q 034470 12 FQPAHQLDLDALLRYASVNVSDFPRSPSKFTISQFGHGQSNP-TFLMEVGSGAAVKRYVLRKKPAGKLLESAHAVDREFQ 90 (94)
Q Consensus 12 ~~~~~~~d~~~L~~wL~~~l~~~~~~~~~~~~~~~~~G~SN~-T~~l~~~~g~~~~~~VLRr~P~g~~~~~ahdl~RE~r 90 (94)
++........+|.++|...+.+ ++.+++++|+||. +|+++...+. ..+|||++|.+ ++|++.+|++
T Consensus 5 ~~r~~~~~~p~l~~~l~~~l~g-------~~~~~~~~G~S~~~v~rl~~~~~~--~~~~lk~~~~~----~~~~~~~E~~ 71 (272)
T 4gkh_A 5 IQRETSCSRPRLNSNLDADLYG-------YRWARDNVGQSGATIYRLYGKPNA--PELFLKHGKGS----VANDVTDEMV 71 (272)
T ss_dssp --------------CHHHHHTT-------CEEEEEECSSSSCEEEEEECCTTC--CCEEEEEEETH----HHHHHHHHHH
T ss_pred HHhhhhcchhhhhHHHhccccC-------CeEEEccCCCcCCeEEEEEecCCC--eEEEEEECCCC----CHhHHHHHHH
Confidence 3334556778899999998865 5688889999996 6888764321 68999999975 5899999999
Q ss_pred hhc
Q 034470 91 VAS 93 (94)
Q Consensus 91 Vl~ 93 (94)
+|+
T Consensus 72 ~l~ 74 (272)
T 4gkh_A 72 RLN 74 (272)
T ss_dssp HHH
T ss_pred HHH
Confidence 986
No 7
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=98.37 E-value=1.8e-07 Score=69.46 Aligned_cols=65 Identities=6% Similarity=-0.000 Sum_probs=53.8
Q ss_pred CCHHHHHHHHhhhCCCCCCCCCceeEeeeCCCcccceEEEEeCCCcceeeEEEeCCCCCCCCCCccchhhhhhhhc
Q 034470 18 LDLDALLRYASVNVSDFPRSPSKFTISQFGHGQSNPTFLMEVGSGAAVKRYVLRKKPAGKLLESAHAVDREFQVAS 93 (94)
Q Consensus 18 ~d~~~L~~wL~~~l~~~~~~~~~~~~~~~~~G~SN~T~~l~~~~g~~~~~~VLRr~P~g~~~~~ahdl~RE~rVl~ 93 (94)
++.++|.+||.++++.. ....+++++++|.+|.+|+|+.++ +.+|||.+|.. ..+.+.+|+++|+
T Consensus 19 ~~~~~l~~~L~~~lg~~---~~i~~~~~l~gG~~n~~y~v~~~~----~~~vlK~~~~~----~~~~~~~E~~~L~ 83 (312)
T 3jr1_A 19 GMWKSISQVLAEQFGAY---YFIKHKEKLYSGEMNEIWLINDEV----QTVFVKINERS----YRSMFRAEADQLA 83 (312)
T ss_dssp HHHHHHHHHHHHHHSSC---CCCCEEEEECCSSSSEEEEEESSS----CEEEEEEEEGG----GHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHhCCC---cceeeeEEeCCccceeeeEEEECC----CeEEEEeCCcc----cHHHHHHHHHHHH
Confidence 57899999999998531 134579999999999999999876 78999998854 3678999999986
No 8
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.34 E-value=4.6e-07 Score=67.78 Aligned_cols=62 Identities=18% Similarity=0.330 Sum_probs=50.4
Q ss_pred CcCCHHHHHHHHhhhCCCCCCCCCceeEeeeCCCcccceEEEEeCCCcceeeEEEeCCCCCCCCCCccchhhhhhhhc
Q 034470 16 HQLDLDALLRYASVNVSDFPRSPSKFTISQFGHGQSNPTFLMEVGSGAAVKRYVLRKKPAGKLLESAHAVDREFQVAS 93 (94)
Q Consensus 16 ~~~d~~~L~~wL~~~l~~~~~~~~~~~~~~~~~G~SN~T~~l~~~~g~~~~~~VLRr~P~g~~~~~ahdl~RE~rVl~ 93 (94)
..+|.+.|.+||.++++. ...++++++|.||.+|+|+.++ +.||||.+|.+ +++.+|+++|+
T Consensus 25 ~~~~~~~l~~~L~~~~~~------~~~i~~l~gG~~n~~y~v~~~g----~~~vlK~~~~~------~~~~~E~~~l~ 86 (362)
T 3ovc_A 25 PELTATSVEKFLIEKFDS------VSDLMQLSEGEESRAFSFDVGG----RGYVLRVNSCA------DGFYKDRYVYR 86 (362)
T ss_dssp ----CHHHHHHHHHHSSC------CEEEEEEEECSSEEEEEEEETT----EEEEEEEESCC------HHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhcCC------CceEEECCCCCcceEEEEEECC----cEEEEEeCCch------hhHHHHHHHHH
Confidence 357889999999998752 4789999999999999999877 89999999864 37999999875
No 9
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=98.21 E-value=1.9e-06 Score=61.61 Aligned_cols=64 Identities=9% Similarity=0.087 Sum_probs=47.3
Q ss_pred HHHHHHhhhCCCCCCCCCceeEeeeCCCcccceEEEEeCCCcceeeEEEeCCCCCCCCCCccchhhhhhhhcC
Q 034470 22 ALLRYASVNVSDFPRSPSKFTISQFGHGQSNPTFLMEVGSGAAVKRYVLRKKPAGKLLESAHAVDREFQVASL 94 (94)
Q Consensus 22 ~L~~wL~~~l~~~~~~~~~~~~~~~~~G~SN~T~~l~~~~g~~~~~~VLRr~P~g~~~~~ahdl~RE~rVl~a 94 (94)
.|.+-+.+..+. .-.+++++++|++|.+|+|+.++| +.+|||++|.+. ....+.+.+|+++|++
T Consensus 4 ~v~a~~~~l~G~-----~v~~v~~~g~G~~~~vyrv~l~DG---~~~~vK~~~~~~-~~~~~~~~~Ea~~L~~ 67 (288)
T 3f7w_A 4 SVAARVTELTGR-----EVAAVAERGHSHRWHLYRVELADG---TPLFVKALPDDA-PALDGLFRAEALGLDW 67 (288)
T ss_dssp HHHHHHHHHHCC-----CEEEEEEEEEETTEEEEEEEETTS---CEEEEEECCTTC-CCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHhcCC-----CeEEEEecCCCCCeEEEEEEECCC---CEEEEEEeCCCC-cchhhHHHHHHHHHHH
Confidence 455555553321 224699999999999999998765 789999988654 4446778999999863
No 10
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.10 E-value=5.9e-07 Score=64.56 Aligned_cols=63 Identities=13% Similarity=0.220 Sum_probs=51.5
Q ss_pred cCCHHHHHHHHhhhCCCCCCCCCceeEeeeCCCcccceEEEEeCCCcceeeEEEeCCCCCCCCCCccchhhhhhhhc
Q 034470 17 QLDLDALLRYASVNVSDFPRSPSKFTISQFGHGQSNPTFLMEVGSGAAVKRYVLRKKPAGKLLESAHAVDREFQVAS 93 (94)
Q Consensus 17 ~~d~~~L~~wL~~~l~~~~~~~~~~~~~~~~~G~SN~T~~l~~~~g~~~~~~VLRr~P~g~~~~~ahdl~RE~rVl~ 93 (94)
.+|.+.+.+||.+++++.. ...++.+++|.+|.+|+++ ..+|||.++.. ...+.+.+|+++|+
T Consensus 3 ~~~~~~l~~~l~~~~p~~~----~~~i~~~~~G~~n~v~~v~-------~~~vlR~~~~~---~~~~~~~~E~~~l~ 65 (304)
T 3sg8_A 3 TYTFDQVEKAIEQLYPDFT----INTIEISGEGNDCIAYEIN-------RDFIFKFPKHS---RGSTNLFNEVNILK 65 (304)
T ss_dssp CCCHHHHHHHHHHHCTTCC----CCCCCEEEECSSEEEEEST-------TSEEEEEESSH---HHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHhCCCcc----ceeeEecCCCCcceEEEEC-------CEEEEEecCCc---chHHHHHHHHHHHH
Confidence 5788999999999998753 2567779999999999985 46999998754 44678999999985
No 11
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.89 E-value=1.5e-05 Score=57.91 Aligned_cols=63 Identities=10% Similarity=0.092 Sum_probs=48.3
Q ss_pred HHHHHHhhhCCCCCCCCCceeEeeeCCCcccceEEEEeCCCcceeeEEEeCCCCCCCCCCccchhhhhhhhc
Q 034470 22 ALLRYASVNVSDFPRSPSKFTISQFGHGQSNPTFLMEVGSGAAVKRYVLRKKPAGKLLESAHAVDREFQVAS 93 (94)
Q Consensus 22 ~L~~wL~~~l~~~~~~~~~~~~~~~~~G~SN~T~~l~~~~g~~~~~~VLRr~P~g~~~~~ahdl~RE~rVl~ 93 (94)
.+.+++++.++. ...+++++++|.+|.+|+++..+| +.+|||.+|... ....+.+.+|+++|+
T Consensus 4 ~v~~~i~~~lG~-----~~~~~~~l~gG~~n~vy~v~~~dG---~~~vvK~~~~~~-~~~~~~~~~E~~~L~ 66 (288)
T 3d1u_A 4 SVAARVTELTGR-----EVAAVAERGHSHRWHLYRVELADG---TPLFVKALPDDA-PALDGLFRAEALGLD 66 (288)
T ss_dssp HHHHHHHHHHCC-----CEEEEEEEEEETTEEEEEEEETTS---CEEEEEECCTTC-CCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHhCC-----CccceeeeCCcchhheEEEEeCCC---CeEEEEecCCCC-cchhHHHHHHHHHHH
Confidence 377888887752 235799999999999999987543 789999988653 233456799999986
No 12
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=97.86 E-value=6.4e-06 Score=59.77 Aligned_cols=61 Identities=16% Similarity=0.269 Sum_probs=48.6
Q ss_pred CHHHHHHHHhhhCCCCCCCCCceeEeeeCCCcccceEEEEeCCCcceeeEEEeCCCCCCCCCCccchhhhhhhhc
Q 034470 19 DLDALLRYASVNVSDFPRSPSKFTISQFGHGQSNPTFLMEVGSGAAVKRYVLRKKPAGKLLESAHAVDREFQVAS 93 (94)
Q Consensus 19 d~~~L~~wL~~~l~~~~~~~~~~~~~~~~~G~SN~T~~l~~~~g~~~~~~VLRr~P~g~~~~~ahdl~RE~rVl~ 93 (94)
....|.+||.+++++.. ...++.+++|.+|.+|++ + ..||||.|+.. ...+.+.+|+++|+
T Consensus 4 ~~~~l~~~l~~~~p~~~----~~~v~~l~~G~~n~v~~v---g----~~~VlR~~~~~---~~~~~~~~E~~~L~ 64 (306)
T 3tdw_A 4 NKLHYTTMIMTQFPDIS----IQSVESLGEGFRNYAILV---N----GDWVFRFPKSQ---QGADELNKEIQLLP 64 (306)
T ss_dssp CHHHHHHHHHHHCTTSC----CSCEEEEEECSSEEEEEE---T----TTEEEEEESSH---HHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCCCC----ceeeeecCCCcceeEEEE---C----CEEEEEecCCc---hHHHHHHHHHHHHH
Confidence 45789999999998653 356888999999999999 3 57999997532 23568999999986
No 13
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=97.74 E-value=3.8e-05 Score=56.54 Aligned_cols=76 Identities=14% Similarity=0.129 Sum_probs=50.8
Q ss_pred CcCCHHHHHHHHhhhCCCCCCC-CCceeEeeeCCCcccceEEEEeCCCc------ceeeEEEeCCCCCCCCCCccchhhh
Q 034470 16 HQLDLDALLRYASVNVSDFPRS-PSKFTISQFGHGQSNPTFLMEVGSGA------AVKRYVLRKKPAGKLLESAHAVDRE 88 (94)
Q Consensus 16 ~~~d~~~L~~wL~~~l~~~~~~-~~~~~~~~~~~G~SN~T~~l~~~~g~------~~~~~VLRr~P~g~~~~~ahdl~RE 88 (94)
..+|.+.+..++...+++..+. ...+++.++++|.+|.+|+|+..++. ..+.+|||.++.+. ....+..+|
T Consensus 10 ~~~~~~~~~~l~~~~~~~w~~~~~~~~~~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~~~~~E 87 (369)
T 3c5i_A 10 DLTDPLYIKKICLEKVPEWNHFTEDNLRVKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV--DELYNTISE 87 (369)
T ss_dssp -CCCHHHHHHHHHHHCGGGTTCCGGGEEEEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG--GGTSCHHHH
T ss_pred ccCCHHHHHHHHHHHCCCCCCCCcCceEEEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc--cceecHHHH
Confidence 3567888988888877655432 24578999999999999999975310 11579999987653 223477899
Q ss_pred hhhhc
Q 034470 89 FQVAS 93 (94)
Q Consensus 89 ~rVl~ 93 (94)
+++|+
T Consensus 88 ~~~l~ 92 (369)
T 3c5i_A 88 FEVYK 92 (369)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99875
No 14
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.52 E-value=9.2e-05 Score=52.71 Aligned_cols=65 Identities=9% Similarity=-0.028 Sum_probs=46.1
Q ss_pred CCcCCHHHHHHHHhhhCCCCCCCCCceeEeeeCCCcccceEEEEeCCCcceeeEEEeCCCCCCCCCCccchhhhhhhhc
Q 034470 15 AHQLDLDALLRYASVNVSDFPRSPSKFTISQFGHGQSNPTFLMEVGSGAAVKRYVLRKKPAGKLLESAHAVDREFQVAS 93 (94)
Q Consensus 15 ~~~~d~~~L~~wL~~~l~~~~~~~~~~~~~~~~~G~SN~T~~l~~~~g~~~~~~VLRr~P~g~~~~~ahdl~RE~rVl~ 93 (94)
....+.+.|..++.++.+- ...+++.+++|.+|.+|+++.++ ..+|||+.+. +...+.+|+++++
T Consensus 14 ~~~~~~~~l~~~l~~~~~~-----~~~~~~~l~gG~~n~~~~v~~~~----~~~vlk~~~~-----~~~~~~~e~~~l~ 78 (346)
T 2q83_A 14 EDAKKLTELAENVLQGWDV-----QAEKIDVIQGNQMALVWKVHTDS----GAVCLKRIHR-----PEKKALFSIFAQD 78 (346)
T ss_dssp HHHHHHHHHHHHHGGGSCC-----CCCEEEECC----CEEEEEEETT----EEEEEEEECS-----CHHHHHHHHHHHH
T ss_pred CcHhHHHHHHHHHHHHcCC-----ceEEeeeccccccCcEEEEEeCC----CCEEEEecCC-----CHHHHHHHHHHHH
Confidence 3456778899999888742 23578888889999999999877 5799999885 2346677777764
No 15
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.52 E-value=0.00021 Score=51.15 Aligned_cols=66 Identities=12% Similarity=0.141 Sum_probs=46.7
Q ss_pred CcCCHHHHHHHHhhhCCCCCCCCCceeEeeeCCCcccceEEEEeCCCcceeeEEEeCCCCCCCCCCccchhhhhhhhc
Q 034470 16 HQLDLDALLRYASVNVSDFPRSPSKFTISQFGHGQSNPTFLMEVGSGAAVKRYVLRKKPAGKLLESAHAVDREFQVAS 93 (94)
Q Consensus 16 ~~~d~~~L~~wL~~~l~~~~~~~~~~~~~~~~~G~SN~T~~l~~~~g~~~~~~VLRr~P~g~~~~~ahdl~RE~rVl~ 93 (94)
..++.+.|..||.+ .+ .+ ...+++.+++|.+|.+|+|+.++ ..||||..+.. .+..++.+|+++|+
T Consensus 5 ~~~~~~~l~~~l~~-~~-~~---~~~~~~~i~~G~~n~~~~v~~~~----g~~vlk~~~~~---~~~~~l~~e~~~l~ 70 (322)
T 2ppq_A 5 TDITEDELRNFLTQ-YD-VG---SLTSYKGIAEGVENSNFLLHTTK----DPLILTLYEKR---VEKNDLPFFLGLMQ 70 (322)
T ss_dssp CCCCHHHHHHHHTT-BC-CC---CEEEEEEECC---EEEEEEEESS----CCEEEEEECC------CCHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHh-CC-CC---cceEeeccCCCcccceEEEEeCC----ccEEEEEeCCC---CCHHHHHHHHHHHH
Confidence 35778899999986 42 21 23578999999999999999877 57999988763 24567888988875
No 16
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.37 E-value=0.00032 Score=50.62 Aligned_cols=59 Identities=8% Similarity=0.183 Sum_probs=37.6
Q ss_pred HHHHHHHhhhCCCCCCCCCceeEeeeCCCcccceE-EEEeC-CCcceeeEEEeCCCCCCCCCCccchhhhhhhhc
Q 034470 21 DALLRYASVNVSDFPRSPSKFTISQFGHGQSNPTF-LMEVG-SGAAVKRYVLRKKPAGKLLESAHAVDREFQVAS 93 (94)
Q Consensus 21 ~~L~~wL~~~l~~~~~~~~~~~~~~~~~G~SN~T~-~l~~~-~g~~~~~~VLRr~P~g~~~~~ahdl~RE~rVl~ 93 (94)
+.|..||.++ +. ...+++.+++|.||.+| +++.+ + +.+|||..|+.. .+++.+|+++++
T Consensus 7 ~~l~~~l~~~--~~----~~~~~~~l~gg~s~~~~~r~~~~~~----~~~vlk~~~~~~----~~~~~~e~~~l~ 67 (333)
T 3csv_A 7 DEIRDFLATH--GY----ADWNRTPLAGDASSRRYQRLRSPTG----AKAVLMDWSPEE----GGDTQPFVDLAQ 67 (333)
T ss_dssp HHHHHHHHHT--TC----TTCEECC--------CCEEEECTTC----CEEEEEECCTTT----TCCSHHHHHHHH
T ss_pred HHHHHHHHhc--CC----CCceeeECCCCCCCceEEEEEcCCC----CeEEEEECCCCC----CccccHHHHHHH
Confidence 6799999986 22 34789999999999955 78764 4 689999877643 268889998875
No 17
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=97.33 E-value=0.00022 Score=55.29 Aligned_cols=51 Identities=14% Similarity=0.177 Sum_probs=37.6
Q ss_pred CceeEeeeCCCcccceEEEEeCCCcceeeEEEeCCCCCCCCCCccchhhhhhhhc
Q 034470 39 SKFTISQFGHGQSNPTFLMEVGSGAAVKRYVLRKKPAGKLLESAHAVDREFQVAS 93 (94)
Q Consensus 39 ~~~~~~~~~~G~SN~T~~l~~~~g~~~~~~VLRr~P~g~~~~~ahdl~RE~rVl~ 93 (94)
..++++++++|.||.+|+|+.+++ ...+|||.++.+. ....|..+|+++|+
T Consensus 109 ~~~~i~~lsgG~tN~~y~v~~~~~--~~~~vLRi~g~~~--~~~idR~~E~~vl~ 159 (458)
T 2qg7_A 109 DSLEFQIINGGITNILIKVKDMSK--QAKYLIRLYGPKT--DEIINREREKKISC 159 (458)
T ss_dssp TTEEEEEECC--CEEEEEEEETTT--TEEEEEEEECC-C--CSCSCHHHHHHHHH
T ss_pred cCeEEEEcCCCeEeEEEEEEECCC--CceEEEEECCCCh--hhhcCHHHHHHHHH
Confidence 568999999999999999998541 1689999986543 33457789999885
No 18
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=97.19 E-value=0.00047 Score=50.69 Aligned_cols=61 Identities=13% Similarity=0.162 Sum_probs=45.1
Q ss_pred cCCHHHHHHHHhhhCCCCCCCCCceeEeeeCCCc--ccceEEEEeCCCcceeeEEEeCCCCCCCCCCccchhhhhhhhc
Q 034470 17 QLDLDALLRYASVNVSDFPRSPSKFTISQFGHGQ--SNPTFLMEVGSGAAVKRYVLRKKPAGKLLESAHAVDREFQVAS 93 (94)
Q Consensus 17 ~~d~~~L~~wL~~~l~~~~~~~~~~~~~~~~~G~--SN~T~~l~~~~g~~~~~~VLRr~P~g~~~~~ahdl~RE~rVl~ 93 (94)
.++.+.|.+|+.++.+- ....++.+.+|. +|.+|+|+.++ ..||||..+... ..+|+++|+
T Consensus 5 ~l~~~~l~~~l~~~ygl-----~~~~~~~l~~G~g~~N~vy~v~~~~----g~~vLK~~~~~~-------~~~E~~~l~ 67 (339)
T 3i1a_A 5 PIQAQQLIELLKVHYGI-----DIHTAQFIQGGADTNAFAYQADSES----KSYFIKLKYGYH-------DEINLSIIR 67 (339)
T ss_dssp SSCTTHHHHHHHHHHCC-----CCSEEEEETTTSCSSCEEEEEECSS----CEEEEEEEECSS-------CCHHHHHHH
T ss_pred CCCHHHHHHHHHHHcCC-----CcceeEEeeccCccccceEEEEeCC----CCEEEEEecCcc-------chHHHHHHH
Confidence 57778999999998742 123566665554 89999999877 589999987644 267887764
No 19
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.17 E-value=0.00094 Score=49.36 Aligned_cols=72 Identities=15% Similarity=0.192 Sum_probs=48.0
Q ss_pred CcCCHHHHHHHHhhhCCCCCCCCCceeEeeeCCCcccceEEEEe--CCCcceeeEEEeCCCCCCC-C-----CCccchhh
Q 034470 16 HQLDLDALLRYASVNVSDFPRSPSKFTISQFGHGQSNPTFLMEV--GSGAAVKRYVLRKKPAGKL-L-----ESAHAVDR 87 (94)
Q Consensus 16 ~~~d~~~L~~wL~~~l~~~~~~~~~~~~~~~~~G~SN~T~~l~~--~~g~~~~~~VLRr~P~g~~-~-----~~ahdl~R 87 (94)
..++.+.+..||. +++-+++ ...++++.+++|.+|.+|+++. ++ +.+|++..|+... . .....+.+
T Consensus 10 ~~l~~~~v~~~l~-~~~~~~~-~~~~~~~~lg~G~~n~vyrv~~~~~~----~~~vvK~~~~~~r~~~~~~~~~~~r~~~ 83 (397)
T 2olc_A 10 ETLNESSAVALAV-KLGLFPS-KSTLTCQEIGDGNLNYVFHIYDQEHD----RALIIKQAVPYAKVVGESWPLTIDRARI 83 (397)
T ss_dssp CCCCHHHHHHHHH-HTTC------CCEEEECCSSSSEEEEEEEC--------CEEEEEEECCC-------CCCCTTHHHH
T ss_pred ccCCHHHHHHHHH-hcCcCCC-CCceEEEECCCCceEEEEEEEECCCC----cEEEEEecchhhcccCCCCcCcHHHHHH
Confidence 4689999999999 4443322 2347899999999999999964 33 6899997665332 1 22345678
Q ss_pred hhhhhc
Q 034470 88 EFQVAS 93 (94)
Q Consensus 88 E~rVl~ 93 (94)
|+++|+
T Consensus 84 E~~~L~ 89 (397)
T 2olc_A 84 ESSALI 89 (397)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988875
No 20
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=97.14 E-value=0.00044 Score=53.07 Aligned_cols=68 Identities=15% Similarity=0.137 Sum_probs=41.3
Q ss_pred HHHHHHHHhhhCCC-CCCC-CCceeEeeeCCCcccceEEEEeCCC-----cceeeEEEeCCCCCCCCC-----Cccchhh
Q 034470 20 LDALLRYASVNVSD-FPRS-PSKFTISQFGHGQSNPTFLMEVGSG-----AAVKRYVLRKKPAGKLLE-----SAHAVDR 87 (94)
Q Consensus 20 ~~~L~~wL~~~l~~-~~~~-~~~~~~~~~~~G~SN~T~~l~~~~g-----~~~~~~VLRr~P~g~~~~-----~ahdl~R 87 (94)
.++...|+.+-+++ .... ...+.+.+|+||.||.+|.++..++ ...+.+|||.+-.+.... ++|.+.|
T Consensus 32 ~~~~~~~~~~~l~~~W~~v~~~~i~v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR 111 (401)
T 3f2s_A 32 RRRAYLWCKEFLPGAWRGLREDEFHISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQK 111 (401)
T ss_dssp HHHHHHHHHHHSCGGGTTCCGGGCEEEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------
T ss_pred HHHHHHHHHHhcCCCCCCCChhheEEEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhh
Confidence 45677888887764 3322 3568999999999999999998532 112689999987655332 4566666
No 21
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.66 E-value=0.0018 Score=49.28 Aligned_cols=52 Identities=21% Similarity=0.192 Sum_probs=38.1
Q ss_pred CceeEeeeCCCcccceEEEEeCCCc-----ceeeEEEeCCCCCCCCCCccchhhhhhhhc
Q 034470 39 SKFTISQFGHGQSNPTFLMEVGSGA-----AVKRYVLRKKPAGKLLESAHAVDREFQVAS 93 (94)
Q Consensus 39 ~~~~~~~~~~G~SN~T~~l~~~~g~-----~~~~~VLRr~P~g~~~~~ahdl~RE~rVl~ 93 (94)
..++++++++|.||.+|+|+..++. ..+.+|||.+... ...+.+.+|+++++
T Consensus 74 ~~~~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~---~~~~~li~E~~~l~ 130 (429)
T 1nw1_A 74 EHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP---ETESHLVAESVIFT 130 (429)
T ss_dssp GGEEEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC---CCHHHHHHHHHHHH
T ss_pred cceEEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC---CcHHHHHHHHHHHH
Confidence 4588999999999999999975320 1268999998431 11267778999875
No 22
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=96.60 E-value=0.0024 Score=47.85 Aligned_cols=54 Identities=20% Similarity=0.338 Sum_probs=39.5
Q ss_pred cCCHHHHHHHHh--hhCC-CCCCCC---CceeEeeeCCCcccceEEEEeCCCcceeeEEEeCCCC
Q 034470 17 QLDLDALLRYAS--VNVS-DFPRSP---SKFTISQFGHGQSNPTFLMEVGSGAAVKRYVLRKKPA 75 (94)
Q Consensus 17 ~~d~~~L~~wL~--~~l~-~~~~~~---~~~~~~~~~~G~SN~T~~l~~~~g~~~~~~VLRr~P~ 75 (94)
.++.+.+..||. ++++ -++. . ..++++.+++|.+|.+|+++.++ +.+|||..++
T Consensus 8 ~l~~~~~~~yl~~~~~~~~~~~~-~~~~~~~~i~~l~~G~~n~vyrv~~~~----~~~vvK~~~p 67 (420)
T 2pyw_A 8 PLNEKSLVDYIKSTPALSSKIGA-DKSDDDLVIKEVGDGNLNFVFIVVGSS----GSLVIKQALP 67 (420)
T ss_dssp CCCTTHHHHHHHTCHHHHHHHTT-TTCCCCCEEEECCCSSSCEEEEEECSS----CEEEEEECCS
T ss_pred cCChhhHHHHHhchhhhhhhcCC-cccccceEEEEccCCCcEEEEEEEcCC----ceEEEEECch
Confidence 567788999999 4432 1111 1 34789999999999999998655 7899995443
No 23
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.58 E-value=0.0011 Score=47.43 Aligned_cols=41 Identities=22% Similarity=0.084 Sum_probs=32.2
Q ss_pred EeeeCCCcccceEEEEeCCCcceeeEEEeCCCCCCCCCCccchhhhhhhhc
Q 034470 43 ISQFGHGQSNPTFLMEVGSGAAVKRYVLRKKPAGKLLESAHAVDREFQVAS 93 (94)
Q Consensus 43 ~~~~~~G~SN~T~~l~~~~g~~~~~~VLRr~P~g~~~~~ahdl~RE~rVl~ 93 (94)
++++++|.||.+|++ . .+|||.++.+. ....+..+|+++++
T Consensus 23 i~~l~gG~tN~~~~~---~-----~~vlR~~~~~~--~~~~~r~~E~~~l~ 63 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA---G-----DLCLRIPGKGT--EEYINRANEAVAAR 63 (301)
T ss_dssp CEEEESCSSEEEEEE---T-----TEEEEEECC------CCCHHHHHHHHH
T ss_pred eeEcCCcccccccee---e-----eEEEECCCCCc--cceeCHHHHHHHHH
Confidence 889999999999999 3 59999998763 33467889998875
No 24
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.31 E-value=0.0073 Score=43.07 Aligned_cols=67 Identities=13% Similarity=0.176 Sum_probs=47.5
Q ss_pred CcCCHHHHHHHHhhhCCCCCCCCCceeEeeeCCCcccceEEEEeCCCcceeeEEEeCCCCCCCCCCccchhhhhhhhc
Q 034470 16 HQLDLDALLRYASVNVSDFPRSPSKFTISQFGHGQSNPTFLMEVGSGAAVKRYVLRKKPAGKLLESAHAVDREFQVAS 93 (94)
Q Consensus 16 ~~~d~~~L~~wL~~~l~~~~~~~~~~~~~~~~~G~SN~T~~l~~~~g~~~~~~VLRr~P~g~~~~~ahdl~RE~rVl~ 93 (94)
..++.+.|..||... +... ..++..++ |.+|.+|+|+..+| +.+|||..+++. .+...+.+|+++++
T Consensus 9 ~~l~~~~i~~~l~~~--g~~~---~~~~~~l~-g~~n~~y~v~~~~g---~~~vlK~~~~~~--~~~~~~~~E~~~~~ 75 (328)
T 1zyl_A 9 QTLHPDTIMDALFEH--GIRV---DSGLTPLN-SYENRVYQFQDEDR---RRFVVKFYRPER--WTADQILEEHQFAL 75 (328)
T ss_dssp CCCCHHHHHHHHHHT--TCCC---CSCCEEEC-CSSSEEEEECCTTC---CCEEEEEECTTT--SCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHc--CCCC---CceEEeec-CcccceEEEEcCCC---CEEEEEEcCCCC--CCHHHHHHHHHHHH
Confidence 467889999999653 2221 12456666 99999999987553 579999987543 24568888988875
No 25
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=95.91 E-value=0.00087 Score=48.43 Aligned_cols=43 Identities=19% Similarity=0.367 Sum_probs=33.9
Q ss_pred eeEeeeCCCcccceEEEEeCCCcceeeEEEeCCCCCCCCCCccchhhhhhhhc
Q 034470 41 FTISQFGHGQSNPTFLMEVGSGAAVKRYVLRKKPAGKLLESAHAVDREFQVAS 93 (94)
Q Consensus 41 ~~~~~~~~G~SN~T~~l~~~~g~~~~~~VLRr~P~g~~~~~ahdl~RE~rVl~ 93 (94)
.+++++++|.+|.+|++ + ..||||.++.+.. ...+.+|+++|+
T Consensus 40 ~~v~~l~~G~~n~vy~v---g----~~~vlR~~~~~~~---~~~~~~E~~~L~ 82 (320)
T 3r70_A 40 NELRYLSSGDDSDTFLC---N----EQYVVKVPKRDSV---RISQKRELELYR 82 (320)
T ss_dssp SCEEEEEECSSEEEEEE---T----TTEEEEEESSHHH---HHHHHHHHHHHH
T ss_pred EEEEeCCCCCCceEEEE---C----CEEEEEeCCcHHH---HHHHHHHHHHHH
Confidence 46888999999999999 3 5799999875432 235899998875
No 26
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=95.79 E-value=0.013 Score=39.70 Aligned_cols=46 Identities=11% Similarity=0.137 Sum_probs=35.1
Q ss_pred eeEeeeC-CCcccceEEEEeCCCcceeeEEEeCCCCCCCCCCccchhhhhhhhc
Q 034470 41 FTISQFG-HGQSNPTFLMEVGSGAAVKRYVLRKKPAGKLLESAHAVDREFQVAS 93 (94)
Q Consensus 41 ~~~~~~~-~G~SN~T~~l~~~~g~~~~~~VLRr~P~g~~~~~ahdl~RE~rVl~ 93 (94)
..+..+. +|.+|.+|+++..+| ..+|||.++.. ...++.+|+++|+
T Consensus 22 ~~~~~~~~gg~~~~v~~~~~~~g---~~~vlK~~~~~----~~~~~~~E~~~l~ 68 (264)
T 1nd4_A 22 YDWAQQTIGCSDAAVFRLSAQGR---PVLFVKTDLSG----ALNELQDEAARLS 68 (264)
T ss_dssp CEEEECSCTTSSCEEEEEECTTS---CCEEEEEECSC----TTSCHHHHHHHHH
T ss_pred CceEecccCCCCceEEEEecCCC---CeEEEEeCCcc----cchhhhHHHHHHH
Confidence 5667665 677799999987543 67999998764 3468999999875
No 27
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=95.79 E-value=0.0078 Score=41.50 Aligned_cols=44 Identities=9% Similarity=0.033 Sum_probs=33.6
Q ss_pred eeCCCcccceEEEEeCCCcceeeEEEeCCCCCCCCCCccchhhhhhhhc
Q 034470 45 QFGHGQSNPTFLMEVGSGAAVKRYVLRKKPAGKLLESAHAVDREFQVAS 93 (94)
Q Consensus 45 ~~~~G~SN~T~~l~~~~g~~~~~~VLRr~P~g~~~~~ahdl~RE~rVl~ 93 (94)
...+|..|.+|+++.++ +.+|||.+|.... ...+++.+|+++|+
T Consensus 21 ~~~g~s~~~v~~~~~~~----~~~vlK~~~~~~~-~~~~~~~~E~~~l~ 64 (263)
T 3tm0_A 21 DTEGMSPAKVYKLVGEN----ENLYLKMTDSRYK-GTTYDVEREKDMML 64 (263)
T ss_dssp CCSCCSSSEEEEEECSS----CEEEEEEECGGGT-TSTTCHHHHHHHHH
T ss_pred eccCCCCCeEEEEECCC----CcEEEEeCCcccC-CCHHHHHHHHHHHH
Confidence 34556668899998766 7899999986532 44678999999986
No 28
>3kxy_T EXSE; type-three secretion system, TTSS, T3SS, chaperone-effector chaperone, effector, chaperone-transcription inhibitor COMP; 2.80A {Pseudomonas aeruginosa}
Probab=37.95 E-value=38 Score=19.06 Aligned_cols=23 Identities=17% Similarity=0.299 Sum_probs=17.6
Q ss_pred CCCCCCcCCHHHHHHHHhhhCCC
Q 034470 11 PFQPAHQLDLDALLRYASVNVSD 33 (94)
Q Consensus 11 ~~~~~~~~d~~~L~~wL~~~l~~ 33 (94)
.|+....-.+.-|.+||+.++.+
T Consensus 17 avrgedrssvaglarwlarnvag 39 (66)
T 3kxy_T 17 AVRGEDRSSVAGLARWLARNVAG 39 (66)
T ss_dssp CCCCCCCSCHHHHHHHHHHHTCC
T ss_pred HHhccchhhHHHHHHHHHHhccC
Confidence 35555566788999999999864
No 29
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=31.41 E-value=51 Score=22.29 Aligned_cols=48 Identities=17% Similarity=0.180 Sum_probs=31.0
Q ss_pred EeeeCCCcccceEEEEeC-CCcceeeEEEeCCCCCCCCCCccchhhhhhhhc
Q 034470 43 ISQFGHGQSNPTFLMEVG-SGAAVKRYVLRKKPAGKLLESAHAVDREFQVAS 93 (94)
Q Consensus 43 ~~~~~~G~SN~T~~l~~~-~g~~~~~~VLRr~P~g~~~~~ahdl~RE~rVl~ 93 (94)
+..++.|....+|+.... .+ ..+++++-...........+.+|.++|+
T Consensus 11 ~~~lG~G~~g~V~~a~~~~~~---~~vavK~~~~~~~~~~~~~~~~E~~~l~ 59 (332)
T 3qd2_B 11 IQCMGRGGFGVVFEAKNKVDD---CNYAIKRIRLPNRELAREKVMREVKALA 59 (332)
T ss_dssp EEEEECC-CSEEEEEEETTTC---CEEEEEEEECCSTTTHHHHHHHHHHHHT
T ss_pred eeEecCCCCeEEEEEEEcCCC---cEEEEEEeecCCchhHHHHHHHHHHHHH
Confidence 567788888899998763 22 6677775433222233457889998886
No 30
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=28.72 E-value=90 Score=20.66 Aligned_cols=44 Identities=16% Similarity=0.222 Sum_probs=30.9
Q ss_pred EeeeCCCcccceEEEEeCCCcceeeEEEeCCCCCCCCCCccchhhhhhhhc
Q 034470 43 ISQFGHGQSNPTFLMEVGSGAAVKRYVLRKKPAGKLLESAHAVDREFQVAS 93 (94)
Q Consensus 43 ~~~~~~G~SN~T~~l~~~~g~~~~~~VLRr~P~g~~~~~ahdl~RE~rVl~ 93 (94)
+..++.|.....|+....+ ..++++.-.... ....+.+|.++|+
T Consensus 26 ~~~lg~G~~g~V~~~~~~~----~~vavK~~~~~~---~~~~~~~E~~~l~ 69 (278)
T 1byg_A 26 LQTIGKGEFGDVMLGDYRG----NKVAVKCIKNDA---TAQAFLAEASVMT 69 (278)
T ss_dssp EEEEEECSSCEEEEEEETT----EEEEEEECCCCC-----HHHHHTHHHHT
T ss_pred EeEEecCCCceEEEEEEcC----CEEEEEEecchh---HHHHHHHHHHHHH
Confidence 5666778888999988766 788888665322 3446788988875
No 31
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=27.45 E-value=42 Score=22.63 Aligned_cols=49 Identities=16% Similarity=0.202 Sum_probs=31.6
Q ss_pred EeeeCCCcccceEEEEeCCCcceeeEEEeCCCCCCCCCCccchhhhhhhhc
Q 034470 43 ISQFGHGQSNPTFLMEVGSGAAVKRYVLRKKPAGKLLESAHAVDREFQVAS 93 (94)
Q Consensus 43 ~~~~~~G~SN~T~~l~~~~g~~~~~~VLRr~P~g~~~~~ahdl~RE~rVl~ 93 (94)
...++.|....+|++..... +..++++.............+.+|+++|+
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~E~~~l~ 75 (285)
T 3is5_A 27 KRKLGSGAFGDVHLVEERSS--GLERVIKTINKDRSQVPMEQIEAEIEVLK 75 (285)
T ss_dssp EEEEEECSSCEEEEEEETTT--CCEEEEEEEEGGGCCSCHHHHHHHHHHHH
T ss_pred cceeccCCCeEEEEEEEccC--CceEEEEEeeccccchhHHHHHHHHHHHH
Confidence 56677788889998876221 15667665443333333457889998875
No 32
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=22.33 E-value=1.3e+02 Score=20.90 Aligned_cols=69 Identities=16% Similarity=0.166 Sum_probs=40.5
Q ss_pred HHHHHHHhhhC--CCCCCCCCcee-EeeeCCCcccceEEEEeCCCcceeeEEEeCCCCCCCCCCccchhhhhhhhc
Q 034470 21 DALLRYASVNV--SDFPRSPSKFT-ISQFGHGQSNPTFLMEVGSGAAVKRYVLRKKPAGKLLESAHAVDREFQVAS 93 (94)
Q Consensus 21 ~~L~~wL~~~l--~~~~~~~~~~~-~~~~~~G~SN~T~~l~~~~g~~~~~~VLRr~P~g~~~~~ahdl~RE~rVl~ 93 (94)
..+..|+.... .... ...++ +..++.|....+|+...... +..++++.-...........+.+|+++|+
T Consensus 15 ~~~~~~~~~~~~~~~~~--~~~y~~~~~lg~G~~g~V~~~~~~~~--~~~va~K~~~~~~~~~~~~~~~~E~~~l~ 86 (360)
T 3eqc_A 15 KRLEAFLTQKQKVGELK--DDDFEKISELGAGNGGVVFKVSHKPS--GLVMARKLIHLEIKPAIRNQIIRELQVLH 86 (360)
T ss_dssp HHHHHHHHHHHTCCCCC--GGGEEEEEEEEECSSCEEEEEEETTT--CCEEEEEEEECCCCHHHHHHHHHHHGGGG
T ss_pred hhHHHHhhhhhcccccc--cccceeeeeecCCCCeEEEEEEECCC--CcEEEEEEeccccCHHHHHHHHHHHHHHH
Confidence 47888887643 2211 23344 67778899999999886421 15566665433221122346788888875
No 33
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=21.66 E-value=72 Score=20.78 Aligned_cols=48 Identities=6% Similarity=0.057 Sum_probs=32.4
Q ss_pred eEeeeCCCcccceEEEEeCCCcceeeEEEeCCCCCCCC-CCccchhhhhhhhc
Q 034470 42 TISQFGHGQSNPTFLMEVGSGAAVKRYVLRKKPAGKLL-ESAHAVDREFQVAS 93 (94)
Q Consensus 42 ~~~~~~~G~SN~T~~l~~~~g~~~~~~VLRr~P~g~~~-~~ahdl~RE~rVl~ 93 (94)
-...++.|....+|+....+ ..++++........ .....+.+|+++|+
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~----~~~avK~~~~~~~~~~~~~~~~~E~~~l~ 62 (271)
T 3kmu_A 14 FLTKLNENHSGELWKGRWQG----NDIVVKVLKVRDWSTRKSRDFNEECPRLR 62 (271)
T ss_dssp EEEEEEEETTEEEEEEEETT----EEEEEEEECCTTCCHHHHHHHHHHGGGGC
T ss_pred HHHHhcCCCcceEEEEEECC----eeEEEEEecccccCHHHHHHHHHHHHHHH
Confidence 36677888888999998765 67777765443222 22235788888875
No 34
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=21.39 E-value=99 Score=20.62 Aligned_cols=51 Identities=12% Similarity=0.180 Sum_probs=30.6
Q ss_pred EeeeCCCcccceEEEEeCC-C-cceeeEEEeCCCCCCCCCCccchhhhhhhhc
Q 034470 43 ISQFGHGQSNPTFLMEVGS-G-AAVKRYVLRKKPAGKLLESAHAVDREFQVAS 93 (94)
Q Consensus 43 ~~~~~~G~SN~T~~l~~~~-g-~~~~~~VLRr~P~g~~~~~ahdl~RE~rVl~ 93 (94)
+..++.|....+|+..... . ..++.++++.-...........+.+|.++|+
T Consensus 26 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~ 78 (302)
T 4e5w_A 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILR 78 (302)
T ss_dssp EEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHH
T ss_pred hhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHH
Confidence 5677888888999987411 1 2226777776443322233357888988875
No 35
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=20.90 E-value=96 Score=20.83 Aligned_cols=50 Identities=14% Similarity=0.154 Sum_probs=31.9
Q ss_pred eEeeeCCCcccceEEEEeCCCcceeeEEEeCCCCCCCCCCccchhhhhhhhc
Q 034470 42 TISQFGHGQSNPTFLMEVGSGAAVKRYVLRKKPAGKLLESAHAVDREFQVAS 93 (94)
Q Consensus 42 ~~~~~~~G~SN~T~~l~~~~g~~~~~~VLRr~P~g~~~~~ahdl~RE~rVl~ 93 (94)
.+..++.|....+|....... +..++++.-...........+.+|+++|+
T Consensus 26 ~~~~lg~G~~g~V~~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~e~~~l~ 75 (303)
T 3a7i_A 26 KLEKIGKGSFGEVFKGIDNRT--QKVVAIKIIDLEEAEDEIEDIQQEITVLS 75 (303)
T ss_dssp EEEEEEECSSSEEEEEEETTT--CCEEEEEEEETTTCSTTHHHHHHHHHHHH
T ss_pred HhhhhcccCCeEEEEEEECCC--CcEEEEEEecccccHHHHHHHHHHHHHHH
Confidence 356777788888998865211 15677776544333333457888888764
No 36
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=20.56 E-value=93 Score=21.14 Aligned_cols=48 Identities=10% Similarity=0.176 Sum_probs=29.9
Q ss_pred EeeeCCCcccceEEEEeCCCcceeeEEEeCCCCCCCCCCccchhhhhhhhc
Q 034470 43 ISQFGHGQSNPTFLMEVGSGAAVKRYVLRKKPAGKLLESAHAVDREFQVAS 93 (94)
Q Consensus 43 ~~~~~~G~SN~T~~l~~~~g~~~~~~VLRr~P~g~~~~~ahdl~RE~rVl~ 93 (94)
...++.|....+|+.....+ ..+++++-...........+.+|.++|+
T Consensus 35 ~~~lg~G~~g~V~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~e~~~l~ 82 (326)
T 3uim_A 35 KNILGRGGFGKVYKGRLADG---TLVAVKRLKEERTQGGELQFQTEVEMIS 82 (326)
T ss_dssp TTEEECCSSSEEEEECCSSS---CCEEEEECCC-----CCCHHHHHHHGGG
T ss_pred ceeEecCCCcEEEEEEecCC---CEEEEEEeccccCchHHHHHHHHHHHHH
Confidence 45667788888998865332 6677776654443333446889998875
No 37
>3ro3_B Minsc, peptide of protein inscuteable homolog; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=20.51 E-value=55 Score=14.88 Aligned_cols=13 Identities=15% Similarity=0.368 Sum_probs=10.6
Q ss_pred cCCHHHHHHHHhh
Q 034470 17 QLDLDALLRYASV 29 (94)
Q Consensus 17 ~~d~~~L~~wL~~ 29 (94)
.++++.+++|+.+
T Consensus 4 ~~qvDSV~rWmeD 16 (22)
T 3ro3_B 4 FMQVDSVQRWMED 16 (26)
T ss_pred hhhhHHHHHHHHH
Confidence 4577889999986
No 38
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=20.26 E-value=1.9e+02 Score=18.99 Aligned_cols=51 Identities=14% Similarity=0.104 Sum_probs=33.0
Q ss_pred cee-EeeeCCCcccceEEEEeC-CCcceeeEEEeCCCCCCCCCCc------cchhhhhhhhc
Q 034470 40 KFT-ISQFGHGQSNPTFLMEVG-SGAAVKRYVLRKKPAGKLLESA------HAVDREFQVAS 93 (94)
Q Consensus 40 ~~~-~~~~~~G~SN~T~~l~~~-~g~~~~~~VLRr~P~g~~~~~a------hdl~RE~rVl~ 93 (94)
.++ ...++.|.....|+.... .+ +.++++.-......... ..+.+|+++|+
T Consensus 20 ~y~~~~~lg~G~~g~V~~~~~~~~~---~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 78 (287)
T 4f0f_A 20 EIEYEKQIGKGGFGLVHKGRLVKDK---SVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78 (287)
T ss_dssp TEEEEEECCCCSSSCEEEEEETTTC---CEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHT
T ss_pred cceehhccccCCceeEEEEEEcCCc---eEEEEEEeeccccccchhHHHHHHHHHHHHHHHH
Confidence 354 667788999999998762 21 66777765543322211 46778888875
Done!