BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 034472
         (93 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8J1G4|KIP1_ASHGO Kinesin-like protein KIP1 OS=Ashbya gossypii (strain ATCC 10895 /
           CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=KIP1 PE=3 SV=1
          Length = 1129

 Score = 30.4 bits (67), Expect = 3.8,   Method: Composition-based stats.
 Identities = 12/26 (46%), Positives = 21/26 (80%)

Query: 43  LAEHAGIRPLVTLTVWRELQKENKDF 68
           L+EHAGI P V + ++REL++ ++D+
Sbjct: 168 LSEHAGIIPRVLVELFRELREVSEDY 193


>sp|P34384|YLPD_CAEEL Uncharacterized protein F02A9.4b OS=Caenorhabditis elegans
           GN=F02A9.4 PE=2 SV=3
          Length = 394

 Score = 29.6 bits (65), Expect = 5.0,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 21/39 (53%)

Query: 33  HMSRDQCIKALAEHAGIRPLVTLTVWRELQKENKDFFRA 71
           H+  D+C+  +A H GI  LV    +   Q+ + D FRA
Sbjct: 148 HLLDDECLAGIASHLGIDHLVRTKEFPISQESSADAFRA 186


>sp|Q55GE6|ROCO7_DICDI Probable serine/threonine-protein kinase roco7 OS=Dictyostelium
            discoideum GN=roco7 PE=3 SV=1
          Length = 2615

 Score = 29.3 bits (64), Expect = 7.5,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 18/40 (45%)

Query: 47   AGIRPLVTLTVWRELQKENKDFFRAYFHSISPRPFMSKTS 86
             G RP+V   +W      N ++ R Y     P+ F S+ S
Sbjct: 1573 GGERPMVMRDLWSPTAHANNEYLRIYEFQFLPKGFFSRLS 1612


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.334    0.141    0.481 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,496,466
Number of Sequences: 539616
Number of extensions: 1122969
Number of successful extensions: 4486
Number of sequences better than 100.0: 3
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4484
Number of HSP's gapped (non-prelim): 3
length of query: 93
length of database: 191,569,459
effective HSP length: 63
effective length of query: 30
effective length of database: 157,573,651
effective search space: 4727209530
effective search space used: 4727209530
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 55 (25.8 bits)