Query 034479
Match_columns 93
No_of_seqs 116 out of 547
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 04:46:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034479.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034479hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ka7_A Oxidoreductase; structu 99.0 8.5E-10 2.9E-14 82.1 7.5 71 6-80 343-413 (425)
2 1b37_A Protein (polyamine oxid 98.5 2E-08 6.9E-13 76.6 1.5 80 2-81 359-445 (472)
3 3qj4_A Renalase; FAD/NAD(P)-bi 98.5 2.2E-07 7.6E-12 67.7 6.8 72 1-80 255-328 (342)
4 1s3e_A Amine oxidase [flavin-c 98.5 4.6E-08 1.6E-12 75.4 2.1 79 2-80 354-440 (520)
5 3nrn_A Uncharacterized protein 98.5 2.3E-07 7.9E-12 69.3 5.7 69 4-80 325-393 (421)
6 2yg5_A Putrescine oxidase; oxi 98.2 2.3E-07 7.8E-12 69.7 0.9 77 3-80 353-437 (453)
7 2z3y_A Lysine-specific histone 98.2 1.6E-06 5.5E-11 69.7 5.0 80 2-81 546-645 (662)
8 2xag_A Lysine-specific histone 98.1 4.3E-06 1.5E-10 69.8 6.2 80 2-81 717-816 (852)
9 2e1m_C L-glutamate oxidase; L- 98.0 2.2E-07 7.4E-12 64.4 -2.4 77 2-81 53-139 (181)
10 3lov_A Protoporphyrinogen oxid 98.0 8.6E-07 2.9E-11 67.1 0.0 67 2-70 374-444 (475)
11 2vvm_A Monoamine oxidase N; FA 97.9 5.8E-07 2E-11 68.5 -1.7 77 3-81 389-472 (495)
12 4gut_A Lysine-specific histone 97.9 9.3E-06 3.2E-10 67.0 4.5 78 2-81 677-764 (776)
13 3i6d_A Protoporphyrinogen oxid 97.9 1.6E-06 5.6E-11 64.7 -0.0 66 2-69 377-446 (470)
14 1sez_A Protoporphyrinogen oxid 97.7 2.6E-06 8.9E-11 64.9 -1.0 66 2-69 403-471 (504)
15 3nks_A Protoporphyrinogen oxid 97.7 3.6E-06 1.2E-10 63.4 -0.3 66 2-69 383-452 (477)
16 4dgk_A Phytoene dehydrogenase; 97.6 3.2E-05 1.1E-09 58.6 3.7 65 5-70 390-469 (501)
17 2jae_A L-amino acid oxidase; o 97.6 2.1E-05 7.2E-10 59.7 1.7 78 2-80 381-471 (489)
18 1yvv_A Amine oxidase, flavin-c 97.5 0.0002 6.9E-09 51.1 5.7 65 2-71 243-307 (336)
19 2ivd_A PPO, PPOX, protoporphyr 97.3 6.5E-05 2.2E-09 56.6 1.4 65 2-69 383-451 (478)
20 4gde_A UDP-galactopyranose mut 97.0 0.00011 3.9E-09 55.4 0.1 74 2-77 384-462 (513)
21 3k7m_X 6-hydroxy-L-nicotine ox 96.5 0.0017 5.9E-08 48.0 3.4 68 11-81 339-413 (431)
22 2iid_A L-amino-acid oxidase; f 96.5 0.00015 5E-09 55.2 -2.6 77 2-80 383-470 (498)
23 1rsg_A FMS1 protein; FAD bindi 95.6 0.018 6E-07 44.2 5.2 25 57-81 470-494 (516)
24 4dsg_A UDP-galactopyranose mut 95.2 0.0018 6.2E-08 49.9 -1.6 69 2-72 360-432 (484)
25 2b9w_A Putative aminooxidase; 94.6 0.0043 1.5E-07 45.9 -0.7 70 2-80 338-412 (424)
26 3kkj_A Amine oxidase, flavin-c 94.0 0.22 7.6E-06 31.8 6.7 61 5-70 246-306 (336)
27 4gcm_A TRXR, thioredoxin reduc 74.9 1.5 5E-05 30.7 2.0 20 52-71 264-283 (312)
28 4a5l_A Thioredoxin reductase; 73.3 1.7 5.7E-05 30.1 2.0 17 54-70 272-288 (314)
29 4fk1_A Putative thioredoxin re 64.9 2 6.7E-05 30.1 0.9 19 53-71 259-277 (304)
30 3ayj_A Pro-enzyme of L-phenyla 64.1 2.4 8.4E-05 34.9 1.4 24 57-81 643-666 (721)
31 2ywl_A Thioredoxin reductase r 55.9 7.5 0.00026 24.8 2.4 20 53-72 130-149 (180)
32 3fbs_A Oxidoreductase; structu 53.8 6 0.00021 26.8 1.8 17 54-70 253-269 (297)
33 4a9w_A Monooxygenase; baeyer-v 53.1 6.2 0.00021 27.4 1.8 13 54-66 310-322 (357)
34 2zxi_A TRNA uridine 5-carboxym 52.8 19 0.00064 29.3 4.7 57 11-72 346-404 (637)
35 3r9u_A Thioredoxin reductase; 52.8 6.4 0.00022 26.9 1.8 18 53-70 271-288 (315)
36 3g5s_A Methylenetetrahydrofola 52.3 4.2 0.00014 32.0 0.8 56 11-70 284-340 (443)
37 3f8d_A Thioredoxin reductase ( 51.8 9.2 0.00031 26.1 2.5 17 54-70 275-291 (323)
38 2e5v_A L-aspartate oxidase; ar 51.2 6.4 0.00022 29.9 1.7 19 53-71 324-342 (472)
39 3lzw_A Ferredoxin--NADP reduct 48.6 7.9 0.00027 26.6 1.7 16 54-69 273-288 (332)
40 1trb_A Thioredoxin reductase; 48.0 10 0.00034 26.2 2.2 16 55-70 275-290 (320)
41 3fpz_A Thiazole biosynthetic e 47.4 5.8 0.0002 28.1 0.9 17 54-70 279-295 (326)
42 3itj_A Thioredoxin reductase 1 46.3 7.7 0.00026 26.8 1.4 16 54-69 295-310 (338)
43 1fl2_A Alkyl hydroperoxide red 46.1 12 0.00042 25.6 2.4 18 54-71 265-282 (310)
44 2q0l_A TRXR, thioredoxin reduc 44.7 11 0.00036 26.0 1.9 17 54-70 269-285 (311)
45 2zbw_A Thioredoxin reductase; 44.5 11 0.00036 26.3 1.9 17 54-70 275-291 (335)
46 4eqs_A Coenzyme A disulfide re 43.8 7.8 0.00027 29.0 1.1 22 52-73 262-283 (437)
47 3ab1_A Ferredoxin--NADP reduct 42.5 12 0.00039 26.6 1.8 16 55-70 287-302 (360)
48 1vdc_A NTR, NADPH dependent th 42.4 9.6 0.00033 26.5 1.4 17 54-70 283-299 (333)
49 3cty_A Thioredoxin reductase; 42.1 12 0.00042 25.9 1.9 17 54-70 276-292 (319)
50 3dje_A Fructosyl amine: oxygen 41.4 60 0.0021 23.5 5.7 59 5-71 306-366 (438)
51 2a87_A TRXR, TR, thioredoxin r 41.2 13 0.00045 26.0 2.0 17 54-70 276-292 (335)
52 3h8l_A NADH oxidase; membrane 41.1 16 0.00055 26.5 2.5 22 54-75 294-316 (409)
53 1hyu_A AHPF, alkyl hydroperoxi 40.6 16 0.00053 28.0 2.4 20 53-72 475-494 (521)
54 3ces_A MNMG, tRNA uridine 5-ca 40.5 38 0.0013 27.5 4.8 55 11-70 341-396 (651)
55 2q7v_A Thioredoxin reductase; 39.8 12 0.0004 26.1 1.5 16 55-70 273-288 (325)
56 3cp8_A TRNA uridine 5-carboxym 38.5 39 0.0013 27.4 4.5 53 13-70 337-390 (641)
57 3vrd_B FCCB subunit, flavocyto 38.0 17 0.00057 26.2 2.1 20 55-74 283-303 (401)
58 1uf3_A Hypothetical protein TT 34.6 12 0.00042 24.3 0.9 35 58-92 33-72 (228)
59 3kd9_A Coenzyme A disulfide re 34.6 18 0.00061 26.8 1.9 17 53-69 267-283 (449)
60 2cul_A Glucose-inhibited divis 34.5 14 0.00048 24.9 1.2 13 56-68 196-208 (232)
61 3d1c_A Flavin-containing putat 33.6 20 0.00068 25.1 1.9 17 54-70 296-312 (369)
62 3hyw_A Sulfide-quinone reducta 33.5 20 0.00069 26.5 2.0 16 55-70 283-298 (430)
63 1chu_A Protein (L-aspartate ox 33.2 16 0.00056 28.2 1.5 19 52-70 361-379 (540)
64 3iwa_A FAD-dependent pyridine 31.2 16 0.00055 27.2 1.1 17 54-70 282-298 (472)
65 3oc4_A Oxidoreductase, pyridin 31.0 17 0.00057 27.0 1.2 18 54-71 267-284 (452)
66 2v3a_A Rubredoxin reductase; a 30.9 19 0.00064 26.0 1.4 16 54-69 265-280 (384)
67 2vdc_G Glutamate synthase [NAD 30.8 20 0.00069 27.1 1.6 16 54-69 405-420 (456)
68 1ryi_A Glycine oxidase; flavop 30.4 21 0.0007 25.3 1.5 63 5-75 284-348 (382)
69 3dk9_A Grase, GR, glutathione 29.7 20 0.00068 26.8 1.4 16 53-68 318-333 (478)
70 3ntd_A FAD-dependent pyridine 29.5 20 0.00068 27.2 1.4 17 53-69 290-306 (565)
71 3dgh_A TRXR-1, thioredoxin red 29.0 22 0.00074 26.7 1.5 17 53-69 313-329 (483)
72 3lad_A Dihydrolipoamide dehydr 28.9 21 0.00071 26.6 1.4 17 53-69 305-321 (476)
73 3dgz_A Thioredoxin reductase 2 28.7 21 0.00072 26.8 1.4 17 53-69 313-329 (488)
74 1kf6_A Fumarate reductase flav 28.3 22 0.00076 28.0 1.5 19 52-70 366-384 (602)
75 3urh_A Dihydrolipoyl dehydroge 28.3 22 0.00074 26.7 1.4 17 53-69 325-341 (491)
76 4dna_A Probable glutathione re 28.3 22 0.00074 26.5 1.4 17 53-69 293-309 (463)
77 3l8k_A Dihydrolipoyl dehydroge 28.1 22 0.00075 26.5 1.4 18 53-70 295-312 (466)
78 2gqf_A Hypothetical protein HI 28.0 25 0.00085 26.0 1.7 14 56-69 361-374 (401)
79 3lxd_A FAD-dependent pyridine 27.9 22 0.00077 25.9 1.4 19 54-72 273-291 (415)
80 2a8x_A Dihydrolipoyl dehydroge 27.8 22 0.00076 26.4 1.4 16 54-69 297-312 (464)
81 3fg2_P Putative rubredoxin red 27.6 23 0.00078 25.8 1.4 19 54-72 263-281 (404)
82 3o0h_A Glutathione reductase; 27.3 23 0.00079 26.6 1.4 17 53-69 313-329 (484)
83 1xhc_A NADH oxidase /nitrite r 27.2 24 0.0008 25.6 1.4 17 54-70 256-272 (367)
84 3h28_A Sulfide-quinone reducta 26.9 36 0.0012 25.0 2.3 18 54-71 281-299 (430)
85 2cdu_A NADPH oxidase; flavoenz 26.8 25 0.00086 26.0 1.5 17 54-70 270-286 (452)
86 1dxl_A Dihydrolipoamide dehydr 26.7 25 0.00086 26.0 1.5 16 54-69 305-320 (470)
87 1q1r_A Putidaredoxin reductase 26.6 19 0.00065 26.7 0.8 20 54-73 272-291 (431)
88 3qfa_A Thioredoxin reductase 1 26.4 24 0.00083 26.9 1.4 16 54-69 342-357 (519)
89 3ef6_A Toluene 1,2-dioxygenase 26.0 25 0.00087 25.7 1.4 17 55-71 264-280 (410)
90 2gqw_A Ferredoxin reductase; f 25.8 26 0.00088 25.7 1.4 19 54-72 261-279 (408)
91 3ics_A Coenzyme A-disulfide re 25.7 25 0.00087 27.0 1.4 17 53-69 305-321 (588)
92 1qo8_A Flavocytochrome C3 fuma 25.3 18 0.00063 27.9 0.5 19 56-74 519-537 (566)
93 2hqm_A GR, grase, glutathione 25.3 26 0.0009 26.2 1.4 16 54-69 310-325 (479)
94 2qae_A Lipoamide, dihydrolipoy 25.1 30 0.001 25.7 1.6 16 54-69 302-317 (468)
95 1ges_A Glutathione reductase; 25.0 27 0.00092 26.0 1.4 16 54-69 291-306 (450)
96 4g6h_A Rotenone-insensitive NA 25.0 33 0.0011 26.3 1.9 25 52-76 357-382 (502)
97 1ebd_A E3BD, dihydrolipoamide 24.7 28 0.00095 25.8 1.4 16 54-69 296-311 (455)
98 1v59_A Dihydrolipoamide dehydr 24.4 28 0.00096 25.9 1.4 16 54-69 313-328 (478)
99 3sx6_A Sulfide-quinone reducta 24.4 41 0.0014 24.8 2.2 19 53-71 291-310 (437)
100 2x8g_A Thioredoxin glutathione 24.3 28 0.00095 26.9 1.4 16 54-69 421-436 (598)
101 3klj_A NAD(FAD)-dependent dehy 24.3 33 0.0011 25.1 1.7 17 54-70 253-269 (385)
102 1use_A VAsp, vasodilator-stimu 24.2 67 0.0023 17.4 2.5 12 6-17 14-25 (45)
103 1zmd_A Dihydrolipoyl dehydroge 23.9 29 0.001 25.8 1.4 16 54-69 308-323 (474)
104 3ic9_A Dihydrolipoamide dehydr 23.8 29 0.001 26.2 1.4 17 53-69 300-316 (492)
105 2eq6_A Pyruvate dehydrogenase 23.4 30 0.001 25.8 1.4 16 54-69 297-312 (464)
106 1d4d_A Flavocytochrome C fumar 22.9 21 0.00072 27.7 0.5 18 56-73 525-542 (572)
107 1ojt_A Surface protein; redox- 22.8 31 0.0011 25.8 1.4 16 54-69 312-327 (482)
108 3cgb_A Pyridine nucleotide-dis 22.5 32 0.0011 25.8 1.4 17 54-70 306-322 (480)
109 3gyx_A Adenylylsulfate reducta 22.3 36 0.0012 27.3 1.7 17 53-69 447-463 (662)
110 3o5y_A Sensor protein; GAF dom 22.2 78 0.0027 20.2 3.1 21 2-22 3-23 (165)
111 1y0p_A Fumarate reductase flav 22.1 20 0.0007 27.6 0.2 19 56-74 524-542 (571)
112 2r9z_A Glutathione amide reduc 22.0 33 0.0011 25.6 1.4 16 54-69 290-305 (463)
113 1xdi_A RV3303C-LPDA; reductase 21.9 34 0.0011 25.8 1.4 16 54-69 305-320 (499)
114 1onf_A GR, grase, glutathione 21.8 42 0.0014 25.3 1.9 16 54-69 300-315 (500)
115 2bc0_A NADH oxidase; flavoprot 21.6 38 0.0013 25.4 1.6 17 54-70 314-330 (490)
116 3v76_A Flavoprotein; structura 21.6 35 0.0012 25.5 1.4 14 56-69 380-393 (417)
117 1nhp_A NADH peroxidase; oxidor 21.4 35 0.0012 25.1 1.4 17 54-70 269-285 (447)
118 2bs2_A Quinol-fumarate reducta 21.0 43 0.0015 26.8 1.9 18 52-69 379-396 (660)
119 4b1b_A TRXR, thioredoxin reduc 20.9 40 0.0014 26.3 1.6 16 54-69 346-361 (542)
120 2wpf_A Trypanothione reductase 20.7 37 0.0013 25.7 1.4 16 54-69 318-333 (495)
121 1fec_A Trypanothione reductase 20.4 38 0.0013 25.6 1.4 16 54-69 314-329 (490)
122 1lvl_A Dihydrolipoamide dehydr 20.3 38 0.0013 25.2 1.4 16 54-69 293-308 (458)
123 1zk7_A HGII, reductase, mercur 20.3 40 0.0014 25.0 1.5 17 54-70 297-313 (467)
124 2vy0_A Endo-beta-1,3-glucanase 20.2 43 0.0015 23.3 1.6 20 58-77 228-252 (264)
No 1
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.00 E-value=8.5e-10 Score=82.10 Aligned_cols=71 Identities=14% Similarity=0.108 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHCCCCCCCceeeEEEEEeCCceecCCCCCCCCCCCCCCCCCCEEEecCccccCcccceeccc
Q 034479 6 DEIIRRVAKQVLALFPSSQGLEVIWSSFVKIGQSLCGEGPGKDPFRRDQKTPVKNFFLAGSYTKQIVWKEQLCLV 80 (93)
Q Consensus 6 eel~~~v~~eL~~~~P~~~~a~v~~~~Vire~~Atf~~~PG~~~~RP~~~T~~~nLfLAGDwt~t~~pAt~~~~~ 80 (93)
++++++++++|++++|.. .+.+ ..|.+.+.+.+.+.||. ..||.++||++||||||||+.+.++.+|+.++
T Consensus 343 ~~~~~~~~~~l~~~~p~~-~~~~--~~v~~~~~~~P~~~~~~-~~~~~~~~p~~gL~laG~~~~~~gg~gv~~~~ 413 (425)
T 3ka7_A 343 ESEIEMGLEDLKEIFPGK-RYEV--LLIQSYHDEWPVNRAAS-GTDPGNETPFSGLYVVGDGAKGKGGIEVEGVA 413 (425)
T ss_dssp HHHHHHHHHHHHHHSTTC-CEEE--EEEEEEBTTBCSBSSCT-TCCCCSBCSSBTEEECSTTSCCTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCC-ceEE--EEEEEECCCcccccccc-CCCCCCCCCcCCeEEeCCccCCCCCCccHHHH
Confidence 566799999999999972 2333 47778889999999984 57899999999999999999999998887654
No 2
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.52 E-value=2e-08 Score=76.56 Aligned_cols=80 Identities=9% Similarity=0.037 Sum_probs=58.1
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCceeeEEEEEe---C--Cceec-CCCCCCC-CCCCCCCCCCCEEEecCccccCccc
Q 034479 2 PLPNDEIIRRVAKQVLALFPSSQGLEVIWSSFVKI---G--QSLCG-EGPGKDP-FRRDQKTPVKNFFLAGSYTKQIVWK 74 (93)
Q Consensus 2 ~~~deel~~~v~~eL~~~~P~~~~a~v~~~~Vire---~--~Atf~-~~PG~~~-~RP~~~T~~~nLfLAGDwt~t~~pA 74 (93)
.++++++++.++++|++++|......+++..+.+. + +..+. ..||... .++..++|++|||+|||+|+..|++
T Consensus 359 ~~~~~e~~~~~l~~L~~~~Pg~~~~~~~~~~~~~W~~~~~~~G~~~~~~~g~~~~~~~~l~~p~~~l~fAG~~t~~~~~g 438 (472)
T 1b37_A 359 QQSDEQTKAEIMQVLRKMFPGKDVPDATDILVPRWWSDRFYKGTFSNWPVGVNRYEYDQLRAPVGRVYFTGEHTSEHYNG 438 (472)
T ss_dssp TSCHHHHHHHHHHHHHHHCTTSCCCCCSEEECCCTTTCTTTSSSEEECBTTCCHHHHHHHHCCBTTEEECSGGGCTTTTT
T ss_pred hCCHHHHHHHHHHHHHHHcCCCCCCCCceEEecccCCCCCCCcccCCCCCCCChhHHHHHhccCCcEEEeecccCCCCCC
Confidence 36899999999999999998643344444443332 1 23333 4567642 3567788999999999999999999
Q ss_pred ceecccc
Q 034479 75 EQLCLVD 81 (93)
Q Consensus 75 t~~~~~~ 81 (93)
+|++++.
T Consensus 439 ~v~GA~~ 445 (472)
T 1b37_A 439 YVHGAYL 445 (472)
T ss_dssp SHHHHHH
T ss_pred chhHHHH
Confidence 9998853
No 3
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.51 E-value=2.2e-07 Score=67.67 Aligned_cols=72 Identities=14% Similarity=0.019 Sum_probs=55.9
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCceeeEEEEEeCCceecCCCCCCCCCCCCCC--CCCCEEEecCccccCcccceec
Q 034479 1 MPLPNDEIIRRVAKQVLALFPSSQGLEVIWSSFVKIGQSLCGEGPGKDPFRRDQKT--PVKNFFLAGSYTKQIVWKEQLC 78 (93)
Q Consensus 1 ~~~~deel~~~v~~eL~~~~P~~~~a~v~~~~Vire~~Atf~~~PG~~~~RP~~~T--~~~nLfLAGDwt~t~~pAt~~~ 78 (93)
+++++|||++.+.++|.++++.. ..+.+.+|.|.++|.+.... ..+|+... ..+||+|||||+... +++.
T Consensus 255 ~~~~~~~~~~~~~~~l~~~~g~~--~~p~~~~v~rW~~a~p~~~~---~~~~~~~~~~~~~~l~laGd~~~g~---~v~~ 326 (342)
T 3qj4_A 255 LEHSIEDVQELVFQQLENILPGL--PQPIATKCQKWRHSQVTNAA---ANCPGQMTLHHKPFLACGGDGFTQS---NFDG 326 (342)
T ss_dssp TTSCHHHHHHHHHHHHHHHSCSC--CCCSEEEEEEETTCSBSSCC---SSSCSCEEEETTTEEEECSGGGSCS---SHHH
T ss_pred hcCCHHHHHHHHHHHHHHhccCC--CCCceeeecccccccccccc---CCCcceeEecCCccEEEEccccCCC---CccH
Confidence 36789999999999999999843 56788899999999875433 23676664 789999999999753 5554
Q ss_pred cc
Q 034479 79 LV 80 (93)
Q Consensus 79 ~~ 80 (93)
++
T Consensus 327 ai 328 (342)
T 3qj4_A 327 CI 328 (342)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 4
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.46 E-value=4.6e-08 Score=75.37 Aligned_cols=79 Identities=18% Similarity=0.177 Sum_probs=59.1
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCceeeEEEEEeCCceec-------CCCCCC-CCCCCCCCCCCCEEEecCccccCcc
Q 034479 2 PLPNDEIIRRVAKQVLALFPSSQGLEVIWSSFVKIGQSLCG-------EGPGKD-PFRRDQKTPVKNFFLAGSYTKQIVW 73 (93)
Q Consensus 2 ~~~deel~~~v~~eL~~~~P~~~~a~v~~~~Vire~~Atf~-------~~PG~~-~~RP~~~T~~~nLfLAGDwt~t~~p 73 (93)
.++++|+++.++++|+++||.....++.+..+.+..+..|. +.||.. ..+|..+++++|||+|||++++.|+
T Consensus 354 ~~~~~e~~~~vl~~L~~~~~~~~~~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~l~~p~~~L~fAG~~t~~~~~ 433 (520)
T 1s3e_A 354 RLTKEERLKKLCELYAKVLGSLEALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDRIYFAGTETATHWS 433 (520)
T ss_dssp TSCHHHHHHHHHHHHHHHHTCGGGGCCSEEEEEEGGGCTTTCSSSCBCCCTTHHHHHGGGTTCCBTTEEECSGGGCSSST
T ss_pred cCCHHHHHHHHHHHHHHHhCccccCCccEEEEEeeCCCCCCCCCCccccCCCccccchHHHhCCCCCEEEeehhhcCcCc
Confidence 46899999999999999998532245666667665544332 455542 2356778899999999999999999
Q ss_pred cceeccc
Q 034479 74 KEQLCLV 80 (93)
Q Consensus 74 At~~~~~ 80 (93)
.+|++++
T Consensus 434 g~v~GAi 440 (520)
T 1s3e_A 434 GYMEGAV 440 (520)
T ss_dssp TSHHHHH
T ss_pred EEhHHHH
Confidence 9998865
No 5
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.46 E-value=2.3e-07 Score=69.34 Aligned_cols=69 Identities=13% Similarity=0.106 Sum_probs=43.6
Q ss_pred CHHHHHHHHHHHHHHHCCCCCCCceeeEEEEEeCCceecCCCCCCCCCCCCCCCCCCEEEecCccccCcccceeccc
Q 034479 4 PNDEIIRRVAKQVLALFPSSQGLEVIWSSFVKIGQSLCGEGPGKDPFRRDQKTPVKNFFLAGSYTKQIVWKEQLCLV 80 (93)
Q Consensus 4 ~deel~~~v~~eL~~~~P~~~~a~v~~~~Vire~~Atf~~~PG~~~~RP~~~T~~~nLfLAGDwt~t~~pAt~~~~~ 80 (93)
+.+++++.+.++|.+++| .++++..+.++....++...+|.. .+ .++ +||||||||++..+..+|+.++
T Consensus 325 ~~~~~~~~~~~~L~~~~p---~~~~~~~~~~~~~~p~~~~~~~~~--~~--~~~-~gl~laGd~~~~~~g~~~~ga~ 393 (421)
T 3nrn_A 325 NVKKAIEKGWEELLEIFP---EGEPLLAQVYRDGNPVNRTRAGLH--IE--WPL-NEVLVVGDGYRPPGGIEVDGIA 393 (421)
T ss_dssp CHHHHHHHHHHHHHHHCT---TCEEEEEEEC-------------C--CC--CCC-SSEEECSTTCCCTTCCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHcC---CCeEEEeeeccCCCCcccccCCCC--CC--CCC-CcEEEECCcccCCCceeeehHH
Confidence 345679999999999999 366666555555555555566663 33 788 9999999999988777776654
No 6
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.22 E-value=2.3e-07 Score=69.72 Aligned_cols=77 Identities=14% Similarity=0.060 Sum_probs=54.9
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCCCceeeEEEEEeCCcee-------cCCCCCC-CCCCCCCCCCCCEEEecCccccCccc
Q 034479 3 LPNDEIIRRVAKQVLALFPSSQGLEVIWSSFVKIGQSLC-------GEGPGKD-PFRRDQKTPVKNFFLAGSYTKQIVWK 74 (93)
Q Consensus 3 ~~deel~~~v~~eL~~~~P~~~~a~v~~~~Vire~~Atf-------~~~PG~~-~~RP~~~T~~~nLfLAGDwt~t~~pA 74 (93)
++++++++.++++|+++||.. ..+++...+.+..+.-+ ...||.. ..+|..+++++|||+|||++++.||.
T Consensus 353 ~~~~~~~~~~l~~L~~~~~~~-~~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~~~~p~~~l~~aG~~~~~~~~g 431 (453)
T 2yg5_A 353 LSAEERKATILASLARYLGPK-AEEPVVYYESDWGSEEWTRGCYAASFDLGGLHRYGADSRTPVGPIHFSCSDIAAEGYQ 431 (453)
T ss_dssp SCHHHHHHHHHHHHHHHHCGG-GGCCSEEEECCTTTCTTTCSSSCEEECTTHHHHHGGGTTCCBTTEEECCGGGCSTTTT
T ss_pred CCHHHHHHHHHHHHHHHhCcc-CCCccEEEEeecCCCCCCCCCCcCcCCCCccccchHHHhCCcCceEEeeccccccccc
Confidence 578999999999999999852 23444555554332211 2356632 23466788999999999999999999
Q ss_pred ceeccc
Q 034479 75 EQLCLV 80 (93)
Q Consensus 75 t~~~~~ 80 (93)
+|++++
T Consensus 432 ~v~gA~ 437 (453)
T 2yg5_A 432 HVDGAV 437 (453)
T ss_dssp SHHHHH
T ss_pred chHHHH
Confidence 988875
No 7
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=98.17 E-value=1.6e-06 Score=69.66 Aligned_cols=80 Identities=15% Similarity=0.095 Sum_probs=56.2
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCceeeEEEEEeCCce-----ec-CCCCCCC--------------CCCCCCCCCCCE
Q 034479 2 PLPNDEIIRRVAKQVLALFPSSQGLEVIWSSFVKIGQSL-----CG-EGPGKDP--------------FRRDQKTPVKNF 61 (93)
Q Consensus 2 ~~~deel~~~v~~eL~~~~P~~~~a~v~~~~Vire~~At-----f~-~~PG~~~--------------~RP~~~T~~~nL 61 (93)
.++++++++.++.+|+++|+......+....+.+..+.- +. +.||... .||+..++..+|
T Consensus 546 ~lsdee~~~~~l~~L~~~~g~~~~~~p~~~~v~~W~~dp~~~Gsys~~~pg~~~~~~~~l~~p~~~~~~~~~~~~~~grl 625 (662)
T 2z3y_A 546 NISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRL 625 (662)
T ss_dssp TSCHHHHHHHHHHHHHHHHCTTSSCCCSEEEECCTTTCTTTSSSCEECBTTCCTHHHHHHHCCBCC---------CCCCE
T ss_pred hCCHHHHHHHHHHHHHHHhCCcccCCCceeEEEEECCCCCCCcccccCCCCCchhhHHHHhCcCccccccccccCCCCcE
Confidence 578999999999999999986544566677777655542 22 3455421 234456678899
Q ss_pred EEecCccccCcccceecccc
Q 034479 62 FLAGSYTKQIVWKEQLCLVD 81 (93)
Q Consensus 62 fLAGDwt~t~~pAt~~~~~~ 81 (93)
|+||++|+..|+++|++++.
T Consensus 626 ~FAGe~ts~~~~g~v~GAi~ 645 (662)
T 2z3y_A 626 FFAGEHTIRNYPATVHGALL 645 (662)
T ss_dssp EECSGGGCTTSTTSHHHHHH
T ss_pred EEEeccccCCCCcCHHHHHH
Confidence 99999999999999999874
No 8
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=98.10 E-value=4.3e-06 Score=69.79 Aligned_cols=80 Identities=15% Similarity=0.096 Sum_probs=60.0
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCceeeEEEEEeCCc-----eec-CCCCCCC--------------CCCCCCCCCCCE
Q 034479 2 PLPNDEIIRRVAKQVLALFPSSQGLEVIWSSFVKIGQS-----LCG-EGPGKDP--------------FRRDQKTPVKNF 61 (93)
Q Consensus 2 ~~~deel~~~v~~eL~~~~P~~~~a~v~~~~Vire~~A-----tf~-~~PG~~~--------------~RP~~~T~~~nL 61 (93)
.++++++++.++.+|+++|+......+....+.+..+. .|. +.||... .||+..++..+|
T Consensus 717 ~lsdeel~~~~l~~L~~ifG~~~~~~P~~~~vtrW~~dp~s~GsYs~~~pG~~~~~~~~L~~P~~~~~~~p~~~~~~grL 796 (852)
T 2xag_A 717 NISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRL 796 (852)
T ss_dssp GSCHHHHHHHHHHHHHHHHCTTTCCCCSEEEECCTTTCTTTSSSCEECBTTCCTTHHHHTTSCBCCCCSSTTCCCCCCCE
T ss_pred cCCHHHHHHHHHHHHHHHhCccccCCceEEEEEecCCCCCcCccccccCCCcchhhHHHHhCccccccccccccCCCCcE
Confidence 47899999999999999998654456677777776554 222 3456532 134556778899
Q ss_pred EEecCccccCcccceecccc
Q 034479 62 FLAGSYTKQIVWKEQLCLVD 81 (93)
Q Consensus 62 fLAGDwt~t~~pAt~~~~~~ 81 (93)
|+||++|+..|+++|++++.
T Consensus 797 ~FAGE~Ts~~~~gtveGAi~ 816 (852)
T 2xag_A 797 FFAGEHTIRNYPATVHGALL 816 (852)
T ss_dssp EECSGGGCTTSTTSHHHHHH
T ss_pred EEEehhHhCCCCcCHHHHHH
Confidence 99999999999999998874
No 9
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.03 E-value=2.2e-07 Score=64.44 Aligned_cols=77 Identities=10% Similarity=0.003 Sum_probs=53.1
Q ss_pred CCCHHHHHHHHHHHHHHHC-CCCCCCceeeE--EEEEeCCce-----ec-CCCCCCC-CCCCCCCCCCCEEEecCccccC
Q 034479 2 PLPNDEIIRRVAKQVLALF-PSSQGLEVIWS--SFVKIGQSL-----CG-EGPGKDP-FRRDQKTPVKNFFLAGSYTKQI 71 (93)
Q Consensus 2 ~~~deel~~~v~~eL~~~~-P~~~~a~v~~~--~Vire~~At-----f~-~~PG~~~-~RP~~~T~~~nLfLAGDwt~t~ 71 (93)
.++++|+++.++.+|.++| |+. ..+... .+.+..+.- +. +.||.+. .++....+..+||+||++|+.
T Consensus 53 ~l~~~e~~~~~l~~L~~~~g~~~--~~~~~~~~~~~~W~~dp~~~Ga~s~~~pg~~~~~~~~l~~p~grl~FAGe~ts~- 129 (181)
T 2e1m_C 53 SFDDAERYGYALENLQSVHGRRI--EVFYTGAGQTQSWLRDPYACGEAAVYTPHQMTAFHLDVVRPEGPVYFAGEHVSL- 129 (181)
T ss_dssp TSCTTTTHHHHHHHHHHHHCGGG--GGTEEEEEEEEESSSCTTTSSSEECCCTTHHHHHHHHHHSCBTTEEECSGGGTT-
T ss_pred cCCHHHHHHHHHHHHHHHhCCCc--HhhccCcceecccCCCCCCCCcccCcCCCchHHHHHHHhCCCCcEEEEEHHHcC-
Confidence 4788999999999999999 443 334344 444332222 22 4566542 244445677899999999996
Q ss_pred cccceecccc
Q 034479 72 VWKEQLCLVD 81 (93)
Q Consensus 72 ~pAt~~~~~~ 81 (93)
|+.+|++++.
T Consensus 130 ~~g~~eGAl~ 139 (181)
T 2e1m_C 130 KHAWIEGAVE 139 (181)
T ss_dssp STTSHHHHHH
T ss_pred CccCHHHHHH
Confidence 9999999874
No 10
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.99 E-value=8.6e-07 Score=67.07 Aligned_cols=67 Identities=13% Similarity=0.113 Sum_probs=54.3
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCceeeEEEEEeCCceecCCCCCCCC----CCCCCCCCCCEEEecCcccc
Q 034479 2 PLPNDEIIRRVAKQVLALFPSSQGLEVIWSSFVKIGQSLCGEGPGKDPF----RRDQKTPVKNFFLAGSYTKQ 70 (93)
Q Consensus 2 ~~~deel~~~v~~eL~~~~P~~~~a~v~~~~Vire~~Atf~~~PG~~~~----RP~~~T~~~nLfLAGDwt~t 70 (93)
.+++|++++.++++|.++|+.. ..+....+.+.+++.+.+.||.... ++...++++|||+||||+..
T Consensus 374 ~~~~e~~~~~~~~~L~~~~g~~--~~p~~~~v~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g 444 (475)
T 3lov_A 374 HESDEVLQQAVLQDLEKICGRT--LEPKQVIISRLMDGLPAYTVGHADRIQRVREEVLAQYPGIYLAGLAYDG 444 (475)
T ss_dssp GSCHHHHHHHHHHHHHHHHSSC--CCCSEEEEEEEEEEEECCCTTHHHHHHHHHHHHHHHSTTEEECSTTTSC
T ss_pred CCCHHHHHHHHHHHHHHHhCCC--CCCeEEEEEEcccCCCCCCCChHHHHHHHHHHHHhhCCCEEEEccCCCC
Confidence 4689999999999999999863 4677889999999999999996322 33344677899999999863
No 11
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.94 E-value=5.8e-07 Score=68.47 Aligned_cols=77 Identities=17% Similarity=0.034 Sum_probs=52.6
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCCCceeeEEEEEeCC-----cee-cCCCCCC-CCCCCCCCCCCCEEEecCccccCcccc
Q 034479 3 LPNDEIIRRVAKQVLALFPSSQGLEVIWSSFVKIGQ-----SLC-GEGPGKD-PFRRDQKTPVKNFFLAGSYTKQIVWKE 75 (93)
Q Consensus 3 ~~deel~~~v~~eL~~~~P~~~~a~v~~~~Vire~~-----Atf-~~~PG~~-~~RP~~~T~~~nLfLAGDwt~t~~pAt 75 (93)
++++++++.++++|++++|.. ..+.+..+.+..+ ..+ .+.||.. ..++..+++.+|||+||||+++.|+++
T Consensus 389 ~~~~e~~~~~~~~L~~~~~~~--~~~~~~~~~~W~~dp~~~g~y~~~~~g~~~~~~~~l~~p~~~l~fAGe~t~~~~~g~ 466 (495)
T 2vvm_A 389 IQPDEDVRETLKAVGQLAPGT--FGVKRLVFHNWVKDEFAKGAWFFSRPGMVSECLQGLREKHGGVVFANSDWALGWRSF 466 (495)
T ss_dssp CCTTTCHHHHHHHHHTTSTTS--CCEEEEEECCTTTCTTTSSSSCCCCTTHHHHHHHHHHCCBTTEEECCGGGCSSSTTS
T ss_pred CCCHHHHHHHHHHHHHhcCCC--CCceEEEEeEcCCCCCCCCCccCcCCCcchhhHHHHhCcCCCEEEechhhhcCCceE
Confidence 345677889999999999862 4455554444322 122 2445543 124444567899999999999999999
Q ss_pred eecccc
Q 034479 76 QLCLVD 81 (93)
Q Consensus 76 ~~~~~~ 81 (93)
|++++.
T Consensus 467 veGAi~ 472 (495)
T 2vvm_A 467 IDGAIE 472 (495)
T ss_dssp HHHHHH
T ss_pred EEhHHH
Confidence 998864
No 12
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.89 E-value=9.3e-06 Score=67.03 Aligned_cols=78 Identities=10% Similarity=0.058 Sum_probs=54.3
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCceeeEEEEEeCCceecCCCCCCCC-CCCC--------CCC-CCCEEEecCccccC
Q 034479 2 PLPNDEIIRRVAKQVLALFPSSQGLEVIWSSFVKIGQSLCGEGPGKDPF-RRDQ--------KTP-VKNFFLAGSYTKQI 71 (93)
Q Consensus 2 ~~~deel~~~v~~eL~~~~P~~~~a~v~~~~Vire~~Atf~~~PG~~~~-RP~~--------~T~-~~nLfLAGDwt~t~ 71 (93)
.++++|+++.++++|+++|+......+....+.+..+.-|.. |.+.. .|+. ..+ ..+||+||++|+..
T Consensus 677 ~lsdeel~~~~l~~L~~ifg~~~~~~P~~~~vt~W~~dp~s~--Gsys~~~~g~~~~~~~~L~~p~~grL~FAGE~Ts~~ 754 (776)
T 4gut_A 677 TLDDKQVLQQCMATLRELFKEQEVPDPTKYFVTRWSTDPWIQ--MAYSFVKTGGSGEAYDIIAEDIQGTVFFAGEATNRH 754 (776)
T ss_dssp TSCHHHHHHHHHHHHHHHTTTSCCCCCSEEEECCGGGCTTTC--CSEEEEBTTCCTHHHHHHHCCBTTTEEECSGGGCSS
T ss_pred cCCHHHHHHHHHHHHHHHhCcccccCcceEEEecCCCCCccC--CCCCccCCCCchhHHHHHhCcCCCcEEEEehhhcCC
Confidence 578999999999999999986444456666666544433332 32222 1222 123 37899999999999
Q ss_pred cccceecccc
Q 034479 72 VWKEQLCLVD 81 (93)
Q Consensus 72 ~pAt~~~~~~ 81 (93)
|+++|++|+.
T Consensus 755 ~~gtveGAi~ 764 (776)
T 4gut_A 755 FPQTVTGAYL 764 (776)
T ss_dssp SCSSHHHHHH
T ss_pred CCcCHHHHHH
Confidence 9999999874
No 13
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.89 E-value=1.6e-06 Score=64.66 Aligned_cols=66 Identities=14% Similarity=0.176 Sum_probs=53.5
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCceeeEEEEEeCCceecCCCCCCCC----CCCCCCCCCCEEEecCccc
Q 034479 2 PLPNDEIIRRVAKQVLALFPSSQGLEVIWSSFVKIGQSLCGEGPGKDPF----RRDQKTPVKNFFLAGSYTK 69 (93)
Q Consensus 2 ~~~deel~~~v~~eL~~~~P~~~~a~v~~~~Vire~~Atf~~~PG~~~~----RP~~~T~~~nLfLAGDwt~ 69 (93)
.++++++++.++++|.++|+.. ..+....+.+.+++.+.+.+|.... ++...++++|||+||||+.
T Consensus 377 ~~~~~~~~~~~~~~l~~~~g~~--~~p~~~~~~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~ 446 (470)
T 3i6d_A 377 DLSDNDIINIVLEDLKKVMNIN--GEPEMTCVTRWHESMPQYHVGHKQRIKELREALASAYPGVYMTGASFE 446 (470)
T ss_dssp TSCHHHHHHHHHHHHGGGSCCC--SCCSEEEEEEEEEEEEECBTTHHHHHHHHHHHHHHHSTTEEECSTTTS
T ss_pred CCCHHHHHHHHHHHHHHHhCCC--CCceEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhhCCCEEEEeecCC
Confidence 4789999999999999999863 5677788999999999999986422 3334456789999999875
No 14
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.75 E-value=2.6e-06 Score=64.87 Aligned_cols=66 Identities=14% Similarity=0.144 Sum_probs=52.2
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCceeeEEEEEeCCceecCCCCCCCCCC---CCCCCCCCEEEecCccc
Q 034479 2 PLPNDEIIRRVAKQVLALFPSSQGLEVIWSSFVKIGQSLCGEGPGKDPFRR---DQKTPVKNFFLAGSYTK 69 (93)
Q Consensus 2 ~~~deel~~~v~~eL~~~~P~~~~a~v~~~~Vire~~Atf~~~PG~~~~RP---~~~T~~~nLfLAGDwt~ 69 (93)
.++++|+++.++++|+++++.. ..+....+.+.+++.+.+.+|....++ ...++++|||+||||+.
T Consensus 403 ~~~~ee~~~~v~~~L~~~~g~~--~~p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~~~~l~~aG~~~~ 471 (504)
T 1sez_A 403 KASRTELKEIVTSDLKQLLGAE--GEPTYVNHLYWSKAFPLYGHNYDSVLDAIDKMEKNLPGLFYAGNHRG 471 (504)
T ss_dssp TCCHHHHHHHHHHHHHHHHCBC--SCCSSEEEEEEEEEEECCCTTHHHHHHHHHHHHHHSTTEEECCSSSS
T ss_pred CCCHHHHHHHHHHHHHHHhCCC--CCCeEEEEeECCCCCCccCcCHHHHHHHHHHHHHhCCCEEEEeecCC
Confidence 4689999999999999999863 456677888888888888888643322 23467899999999987
No 15
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.74 E-value=3.6e-06 Score=63.39 Aligned_cols=66 Identities=9% Similarity=-0.067 Sum_probs=51.6
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCceeeEEEEEeCCceecCCCCCCCCCCCCC----CCCCCEEEecCccc
Q 034479 2 PLPNDEIIRRVAKQVLALFPSSQGLEVIWSSFVKIGQSLCGEGPGKDPFRRDQK----TPVKNFFLAGSYTK 69 (93)
Q Consensus 2 ~~~deel~~~v~~eL~~~~P~~~~a~v~~~~Vire~~Atf~~~PG~~~~RP~~~----T~~~nLfLAGDwt~ 69 (93)
.++++++++.++++|.++++.. ..+...+|.+.++|.+.+.+|....+.... ...+|||+||||..
T Consensus 383 ~~~~~~~~~~~~~~L~~~~g~~--~~~~~~~v~rw~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~l~G~~~~ 452 (477)
T 3nks_A 383 VLSQELFQQRAQEAAATQLGLK--EMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGASYE 452 (477)
T ss_dssp CCCHHHHHHHHHHHHHHHHCCC--SCCSEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHTTCSEEECSTTTS
T ss_pred CCCHHHHHHHHHHHHHHHhCCC--CCCcEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhcCCCEEEEccCCC
Confidence 3689999999999999999753 456788999999999999999754322211 22468999999974
No 16
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=97.64 E-value=3.2e-05 Score=58.62 Aligned_cols=65 Identities=15% Similarity=0.230 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHH-CCCCCCCceeeEEEEE----e------CCceecCCCC---CCCCCCCCC-CCCCCEEEecCccc
Q 034479 5 NDEIIRRVAKQVLAL-FPSSQGLEVIWSSFVK----I------GQSLCGEGPG---KDPFRRDQK-TPVKNFFLAGSYTK 69 (93)
Q Consensus 5 deel~~~v~~eL~~~-~P~~~~a~v~~~~Vir----e------~~Atf~~~PG---~~~~RP~~~-T~~~nLfLAGDwt~ 69 (93)
.+++.++++++|.+. +|... ..|+..++.. + .-+.|...+. ....||.++ |+++|||||||||.
T Consensus 390 ~~~~~~~vl~~l~~~~~P~~~-~~i~~~~~~tP~~~~~~~~~~~G~~~g~~~~~~q~~~~RP~~~~t~i~gLyl~G~~t~ 468 (501)
T 4dgk_A 390 GPKLRDRIFAYLEQHYMPGLR-SQLVTHRMFTPFDFRDQLNAYHGSAFSVEPVLTQSAWFRPHNRDKTITNLYLVGAGTH 468 (501)
T ss_dssp HHHHHHHHHHHHHHHTCTTHH-HHEEEEEEECTTTTC------------------------------CCTTEEECCCH--
T ss_pred HHHHHHHHHHHHHHhhCCChH-HceEEEEECCHHHHHHHcCCCCccccChhcchhhccccCCCCCCCCCCCEEEECCCCC
Confidence 467788899999864 58653 4455555542 0 1122222222 122588664 89999999999997
Q ss_pred c
Q 034479 70 Q 70 (93)
Q Consensus 70 t 70 (93)
.
T Consensus 469 p 469 (501)
T 4dgk_A 469 P 469 (501)
T ss_dssp -
T ss_pred C
Confidence 4
No 17
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.56 E-value=2.1e-05 Score=59.72 Aligned_cols=78 Identities=13% Similarity=0.091 Sum_probs=51.0
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCceeeEEEEEeCCceecCC------------CCCC-CCCCCCCCCCCCEEEecCcc
Q 034479 2 PLPNDEIIRRVAKQVLALFPSSQGLEVIWSSFVKIGQSLCGEG------------PGKD-PFRRDQKTPVKNFFLAGSYT 68 (93)
Q Consensus 2 ~~~deel~~~v~~eL~~~~P~~~~a~v~~~~Vire~~Atf~~~------------PG~~-~~RP~~~T~~~nLfLAGDwt 68 (93)
.++++++++.++++|.+++|......+....+.+..+..+... ||.. ..++..+++.+|||+||+++
T Consensus 381 ~~~~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~W~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~faG~~~ 460 (489)
T 2jae_A 381 SLTHRQRLAKAIAEGSEIHGEKYTRDISSSFSGSWRRTKYSESAWANWAGSGGSHGGAATPEYEKLLEPVDKIYFAGDHL 460 (489)
T ss_dssp TSCHHHHHHHHHHHHHHHHCGGGGSSEEEEEEEEGGGSTTTSCSSCEETTC-------CCHHHHHHTSCBTTEEECSGGG
T ss_pred cCCHHHHHHHHHHHHHHHcCcchhhhccccEEEEcCCCCCCCCcchhcccccCCCcccchhhHHHHhCCCCcEEEeEHHh
Confidence 4689999999999999999851124455555555555443211 3321 11334467889999999999
Q ss_pred ccCcccceeccc
Q 034479 69 KQIVWKEQLCLV 80 (93)
Q Consensus 69 ~t~~pAt~~~~~ 80 (93)
.. ++.+|.+++
T Consensus 461 ~~-~~~~v~gAi 471 (489)
T 2jae_A 461 SN-AIAWQHGAL 471 (489)
T ss_dssp BS-STTSHHHHH
T ss_pred cc-CccHHHHHH
Confidence 74 777777654
No 18
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.46 E-value=0.0002 Score=51.10 Aligned_cols=65 Identities=6% Similarity=0.017 Sum_probs=43.6
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCceeeEEEEEeCCceecCCCCCCCCCCCCCCCCCCEEEecCccccC
Q 034479 2 PLPNDEIIRRVAKQVLALFPSSQGLEVIWSSFVKIGQSLCGEGPGKDPFRRDQKTPVKNFFLAGSYTKQI 71 (93)
Q Consensus 2 ~~~deel~~~v~~eL~~~~P~~~~a~v~~~~Vire~~Atf~~~PG~~~~RP~~~T~~~nLfLAGDwt~t~ 71 (93)
+++++++.+++.+++.++++.. ...+....+.|...+.+....+.. ....+.++|+|||||+..+
T Consensus 243 ~~~~~~~~~~l~~~l~~~lg~~-~~~p~~~~~~rw~~a~~~~~~~~~----~~~~~~~rl~laGDa~~g~ 307 (336)
T 1yvv_A 243 DASREQVIEHLHGAFAELIDCT-MPAPVFSLAHRWLYARPAGAHEWG----ALSDADLGIYVCGDWCLSG 307 (336)
T ss_dssp TSCHHHHHHHHHHHHHTTCSSC-CCCCSEEEEEEEEEEEESSCCCCS----CEEETTTTEEECCGGGTTS
T ss_pred hCCHHHHHHHHHHHHHHHhCCC-CCCCcEEEccccCccCCCCCCCCC----eeecCCCCEEEEecCCCCC
Confidence 5789999999999999999852 223444556665555544433221 1123568999999999764
No 19
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.29 E-value=6.5e-05 Score=56.62 Aligned_cols=65 Identities=11% Similarity=0.060 Sum_probs=48.9
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCceeeEEEEEeCCceecCCCCCCCC----CCCCCCCCCCEEEecCccc
Q 034479 2 PLPNDEIIRRVAKQVLALFPSSQGLEVIWSSFVKIGQSLCGEGPGKDPF----RRDQKTPVKNFFLAGSYTK 69 (93)
Q Consensus 2 ~~~deel~~~v~~eL~~~~P~~~~a~v~~~~Vire~~Atf~~~PG~~~~----RP~~~T~~~nLfLAGDwt~ 69 (93)
.++++++++.++++|.+++|.. ..+...++.+.+++.+.+.||.... ++...+ ++|||+||||+.
T Consensus 383 ~~~~~~~~~~~~~~l~~~~~~~--~~p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~-~~~l~~aG~~~~ 451 (478)
T 2ivd_A 383 EQDEDALAALAREELKALAGVT--ARPSFTRVFRWPLGIPQYNLGHLERVAAIDAALQR-LPGLHLIGNAYK 451 (478)
T ss_dssp GSCHHHHHHHHHHHHHHHHCCC--SCCSEEEEEEESSCCBCCBTTHHHHHHHHHHHHHT-STTEEECSTTTS
T ss_pred CCCHHHHHHHHHHHHHHHhCCC--CCCcEEEEEECCCcccCCCcCHHHHHHHHHHHHhh-CCCEEEEccCCC
Confidence 3678999999999999999864 3566677888888877788886322 112223 789999999983
No 20
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.00 E-value=0.00011 Score=55.42 Aligned_cols=74 Identities=8% Similarity=0.052 Sum_probs=58.6
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCceeeEEEEEeCCceecCCCCCCCC----CCCCCCCCCCEEEecCccccCcc-cce
Q 034479 2 PLPNDEIIRRVAKQVLALFPSSQGLEVIWSSFVKIGQSLCGEGPGKDPF----RRDQKTPVKNFFLAGSYTKQIVW-KEQ 76 (93)
Q Consensus 2 ~~~deel~~~v~~eL~~~~P~~~~a~v~~~~Vire~~Atf~~~PG~~~~----RP~~~T~~~nLfLAGDwt~t~~p-At~ 76 (93)
.+++|+|++.+.++|.++.+......++..+|.|.++|-+.+..|.... ++..+. +|||++|-+-.-.|. .+|
T Consensus 384 ~~~de~l~~~~~~~L~~~~~i~~~~~i~~~~v~r~~~ayP~y~~~~~~~~~~~~~~l~~--~~l~~~GR~g~~~Y~~~n~ 461 (513)
T 4gde_A 384 PVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLEREGTLTQILPKLQD--KDIWSRGRFGSWRYEVGNQ 461 (513)
T ss_dssp CCCTTTHHHHHHHHHHHTTSSCTTCEEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHHH--TTEEECSTTTTCCGGGCSH
T ss_pred CCCHHHHHHHHHHHHHHhcCCCCccceEEEEEEECCCeecccCHhHHHHHHHHHHHHhh--cCcEEecCCcccCcCCCCH
Confidence 4789999999999999999876667899999999999999999987543 333333 699999976655665 455
Q ss_pred e
Q 034479 77 L 77 (93)
Q Consensus 77 ~ 77 (93)
.
T Consensus 462 D 462 (513)
T 4gde_A 462 D 462 (513)
T ss_dssp H
T ss_pred H
Confidence 4
No 21
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=96.51 E-value=0.0017 Score=48.04 Aligned_cols=68 Identities=15% Similarity=0.104 Sum_probs=46.7
Q ss_pred HHHHHHHHHCCCCCCCceeeEEEEEeCC------ceecCCCCCC-CCCCCCCCCCCCEEEecCccccCcccceecccc
Q 034479 11 RVAKQVLALFPSSQGLEVIWSSFVKIGQ------SLCGEGPGKD-PFRRDQKTPVKNFFLAGSYTKQIVWKEQLCLVD 81 (93)
Q Consensus 11 ~v~~eL~~~~P~~~~a~v~~~~Vire~~------Atf~~~PG~~-~~RP~~~T~~~nLfLAGDwt~t~~pAt~~~~~~ 81 (93)
++.+.|++++|+. .++...+.+... +-..+.||.. ..+|..+.|..+||+||..|++.|+.+|++++.
T Consensus 339 ~~~~~l~~~~~~~---~~~~~~~~~W~~d~~~~G~~~~~~~g~~~~~~~~l~~p~g~~~fAGe~t~~~~~g~~~GA~~ 413 (431)
T 3k7m_X 339 AVKDAVLYYLPEV---EVLGIDYHDWIADPLFEGPWVAPRVGQFSRVHKELGEPAGRIHFVGSDVSLEFPGYIEGALE 413 (431)
T ss_dssp HHHHHHHHHCTTC---EEEEEECCCTTTCTTTSSSSCCCCTTTTTTSSGGGGSCBTTEEECSGGGCSSSTTSHHHHHH
T ss_pred HHHHHHHHhcCCC---CccEeEecccCCCCCCCCCCCCcCCCCCcccHHHHhCCCCcEEEEehhhhccCCeEehHHHH
Confidence 4667889999863 243333333211 2222467763 456777788899999999999999999999874
No 22
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=96.49 E-value=0.00015 Score=55.19 Aligned_cols=77 Identities=14% Similarity=0.052 Sum_probs=47.2
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCc----eeeEEEEEeCCcee------cCCCCCCC-CCCCCCCCCCCEEEecCcccc
Q 034479 2 PLPNDEIIRRVAKQVLALFPSSQGLE----VIWSSFVKIGQSLC------GEGPGKDP-FRRDQKTPVKNFFLAGSYTKQ 70 (93)
Q Consensus 2 ~~~deel~~~v~~eL~~~~P~~~~a~----v~~~~Vire~~Atf------~~~PG~~~-~RP~~~T~~~nLfLAGDwt~t 70 (93)
.++++++++.++++|.++++... .. .....+.+..+..+ ...||... .++...++.+|||+||+++..
T Consensus 383 ~~~~~~~~~~~l~~L~~~~g~~~-~~~~~~~~~~~~~~W~~~p~~~G~~~~~~~~~~~~~~~~l~~p~~~l~fAGe~t~~ 461 (498)
T 2iid_A 383 ALDFKDCADIVFNDLSLIHQLPK-KDIQSFCYPSVIQKWSLDKYAMGGITTFTPYQFQHFSDPLTASQGRIYFAGEYTAQ 461 (498)
T ss_dssp TSCHHHHHHHHHHHHHHHHTCCH-HHHHHHEEEEEEEEGGGCTTTCSSEECCCTTHHHHHHHHHHCCBTTEEECSGGGSS
T ss_pred cCCHHHHHHHHHHHHHHHcCCCh-hhhhhhcCccEEEecCCCCCCCceeeecCCcchHHHHHHHhCCCCcEEEEEccccc
Confidence 47899999999999999997321 11 12233444333222 12333221 133345678999999999976
Q ss_pred Ccccceeccc
Q 034479 71 IVWKEQLCLV 80 (93)
Q Consensus 71 ~~pAt~~~~~ 80 (93)
.+ .+|++++
T Consensus 462 ~~-g~~~GAi 470 (498)
T 2iid_A 462 AH-GWIDSTI 470 (498)
T ss_dssp SS-SCHHHHH
T ss_pred CC-cCHHHHH
Confidence 54 6777655
No 23
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=95.57 E-value=0.018 Score=44.20 Aligned_cols=25 Identities=12% Similarity=-0.191 Sum_probs=22.4
Q ss_pred CCCCEEEecCccccCcccceecccc
Q 034479 57 PVKNFFLAGSYTKQIVWKEQLCLVD 81 (93)
Q Consensus 57 ~~~nLfLAGDwt~t~~pAt~~~~~~ 81 (93)
+..+||+||+.|+..|+++|++|+.
T Consensus 470 ~~~rl~FAGe~ts~~~~g~v~GA~~ 494 (516)
T 1rsg_A 470 QDSRIRFAGEHTIMDGAGCAYGAWE 494 (516)
T ss_dssp SSSSEEECSTTSCSTTBTSHHHHHH
T ss_pred CCCcEEEeccccccCCCccchhHHH
Confidence 5678999999999999999999874
No 24
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=95.16 E-value=0.0018 Score=49.94 Aligned_cols=69 Identities=10% Similarity=0.054 Sum_probs=50.5
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCceeeEEEEEeCCceecCCCCCCCC----CCCCCCCCCCEEEecCccccCc
Q 034479 2 PLPNDEIIRRVAKQVLALFPSSQGLEVIWSSFVKIGQSLCGEGPGKDPF----RRDQKTPVKNFFLAGSYTKQIV 72 (93)
Q Consensus 2 ~~~deel~~~v~~eL~~~~P~~~~a~v~~~~Vire~~Atf~~~PG~~~~----RP~~~T~~~nLfLAGDwt~t~~ 72 (93)
.+++|||++.+.++|.++..-.....+....|.|.+.+-+.+.+|.... |..... . ||+++|.+-.-.|
T Consensus 360 ~~~d~~l~~~a~~~L~~~~~~~~~~~~~~~~v~r~~~~yP~y~~~~~~~~~~~~~~l~~-~-~l~~~Gr~g~~~y 432 (484)
T 4dsg_A 360 PVNHSTLIEDCIVGCLASNLLLPEDLLVSKWHYRIEKGYPTPFIGRNNLLEKAQPELMS-R-CIYSRGRFGAWRY 432 (484)
T ss_dssp CCCTTSHHHHHHHHHHHTTSCCTTCCEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHHH-T-TEEECSTTTTCCG
T ss_pred cCCHHHHHHHHHHHHHHcCCCCccceEEEEEEEEeCccccCCCccHHHHHHHHHHHHHh-C-CcEeecCCccccc
Confidence 4689999999999999986432224566678999999999999996533 232222 3 9999999665555
No 25
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=94.65 E-value=0.0043 Score=45.90 Aligned_cols=70 Identities=11% Similarity=-0.061 Sum_probs=40.2
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCceeeEEEEEeCCceecCC-----CCCCCCCCCCCCCCCCEEEecCccccCcccce
Q 034479 2 PLPNDEIIRRVAKQVLALFPSSQGLEVIWSSFVKIGQSLCGEG-----PGKDPFRRDQKTPVKNFFLAGSYTKQIVWKEQ 76 (93)
Q Consensus 2 ~~~deel~~~v~~eL~~~~P~~~~a~v~~~~Vire~~Atf~~~-----PG~~~~RP~~~T~~~nLfLAGDwt~t~~pAt~ 76 (93)
.++++++.+.+.++|.++.+.. ..+.... ... ..+.+. .|.. .++....+.+|||+||+|+..++ |
T Consensus 338 ~~~~~~~~~~v~~~l~~l~~~~--~~~~~~~-~w~--~~p~~~~~~~~~G~~-~~~~~~~~~~~l~~aG~~~~~g~---~ 408 (424)
T 2b9w_A 338 DKTQEECRQMVLDDMETFGHPV--EKIIEEQ-TWY--YFPHVSSEDYKAGWY-EKVEGMQGRRNTFYAGEIMSFGN---F 408 (424)
T ss_dssp CCCHHHHHHHHHHHHHHTTCCE--EEEEEEE-EEE--EEEECCHHHHHTTHH-HHHHHTTTGGGEEECSGGGSCSS---H
T ss_pred ccChHHHHHHHHHHHHHcCCcc--ccccccc-cee--eeeccCHHHHhccHH-HHHHHHhCCCCceEecccccccc---H
Confidence 4678999999999999854421 2222111 111 112111 1221 23334456789999999998654 6
Q ss_pred eccc
Q 034479 77 LCLV 80 (93)
Q Consensus 77 ~~~~ 80 (93)
+|++
T Consensus 409 e~a~ 412 (424)
T 2b9w_A 409 DEVC 412 (424)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7664
No 26
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=94.03 E-value=0.22 Score=31.83 Aligned_cols=61 Identities=7% Similarity=0.038 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCceeeEEEEEeCCceecCCCCCCCCCCCCCCCCCCEEEecCcccc
Q 034479 5 NDEIIRRVAKQVLALFPSSQGLEVIWSSFVKIGQSLCGEGPGKDPFRRDQKTPVKNFFLAGSYTKQ 70 (93)
Q Consensus 5 deel~~~v~~eL~~~~P~~~~a~v~~~~Vire~~Atf~~~PG~~~~RP~~~T~~~nLfLAGDwt~t 70 (93)
..+..+.....+...+... ...+....+.+.+.+...... ..+...+..+|+||||||+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~w~~a~~~~~~----~~~~~~~~~~~v~l~GDa~~g 306 (336)
T 3kkj_A 246 REQVIEHLHGAFAELIDCT-MPAPVFSLAHRWLYARPAGAH----EWGALSDADLGIYVCGDWCLS 306 (336)
T ss_dssp HHHHHHHHHHHHHTTCSSC-CCCCSEEEEEEEEEEEESSCC----CCSSEEETTTTEEECCGGGTT
T ss_pred chhhhhhhhhhhhhhccCC-cCcchheeccceeeccccccc----CccceeeCCCCEEEEecccCC
Confidence 3444555555566555432 244555566665555444322 123334677899999999753
No 27
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=74.91 E-value=1.5 Score=30.72 Aligned_cols=20 Identities=30% Similarity=0.370 Sum_probs=16.0
Q ss_pred CCCCCCCCCEEEecCccccC
Q 034479 52 RDQKTPVKNFFLAGSYTKQI 71 (93)
Q Consensus 52 P~~~T~~~nLfLAGDwt~t~ 71 (93)
...+|++||+|.|||-+..+
T Consensus 264 ~~~~Ts~pgIyA~GDv~~~~ 283 (312)
T 4gcm_A 264 DDMTTSVPGIFAAGDVRDKG 283 (312)
T ss_dssp TTSBCSSTTEEECSTTBSCS
T ss_pred CCCccCCCCEEEEeecCCCc
Confidence 34578999999999987544
No 28
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=73.27 E-value=1.7 Score=30.14 Aligned_cols=17 Identities=29% Similarity=0.474 Sum_probs=14.5
Q ss_pred CCCCCCCEEEecCcccc
Q 034479 54 QKTPVKNFFLAGSYTKQ 70 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~t 70 (93)
.+|++||+|.|||-+..
T Consensus 272 ~~Ts~pgIyA~GDv~~~ 288 (314)
T 4a5l_A 272 PKTSVDGVFACGDVCDR 288 (314)
T ss_dssp TBCSSTTEEECSTTTCS
T ss_pred CccCCCCEEEEEeccCC
Confidence 47999999999998754
No 29
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=64.85 E-value=2 Score=30.13 Aligned_cols=19 Identities=42% Similarity=0.412 Sum_probs=15.4
Q ss_pred CCCCCCCCEEEecCccccC
Q 034479 53 DQKTPVKNFFLAGSYTKQI 71 (93)
Q Consensus 53 ~~~T~~~nLfLAGDwt~t~ 71 (93)
..+|++||+|.|||-+..+
T Consensus 259 ~~~Ts~p~IyA~GDv~~~~ 277 (304)
T 4fk1_A 259 FGRTSEKNIYLAGETTTQG 277 (304)
T ss_dssp TCBCSSTTEEECSHHHHTS
T ss_pred CCccCCCCEEEEeccCCCc
Confidence 4578999999999987543
No 30
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=64.15 E-value=2.4 Score=34.89 Aligned_cols=24 Identities=13% Similarity=-0.108 Sum_probs=19.1
Q ss_pred CCCCEEEecCccccCcccceecccc
Q 034479 57 PVKNFFLAGSYTKQIVWKEQLCLVD 81 (93)
Q Consensus 57 ~~~nLfLAGDwt~t~~pAt~~~~~~ 81 (93)
+..+||+|||.++ .+.+=+++++.
T Consensus 643 ~~gri~fAGe~~S-~~~GWieGAl~ 666 (721)
T 3ayj_A 643 LDNRFFIASDSYS-HLGGWLEGAFM 666 (721)
T ss_dssp TCCCEEECSGGGS-SCTTSHHHHHH
T ss_pred CCCCEEEeehhhc-cCCceehHHHH
Confidence 4578999999997 67777777764
No 31
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=55.93 E-value=7.5 Score=24.78 Aligned_cols=20 Identities=15% Similarity=0.245 Sum_probs=15.8
Q ss_pred CCCCCCCCEEEecCccccCc
Q 034479 53 DQKTPVKNFFLAGSYTKQIV 72 (93)
Q Consensus 53 ~~~T~~~nLfLAGDwt~t~~ 72 (93)
..+|..+|+|.+||-+....
T Consensus 130 ~~~t~~~~i~a~GD~~~~~~ 149 (180)
T 2ywl_A 130 GGRTSYPRVYAAGVARGKVP 149 (180)
T ss_dssp TCBCSSTTEEECGGGGTCCS
T ss_pred CCCcCCCCEEEeecccCcch
Confidence 34678899999999887643
No 32
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=53.78 E-value=6 Score=26.77 Aligned_cols=17 Identities=18% Similarity=0.495 Sum_probs=14.2
Q ss_pred CCCCCCCEEEecCcccc
Q 034479 54 QKTPVKNFFLAGSYTKQ 70 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~t 70 (93)
.+|..+|+|.+||-+..
T Consensus 253 ~~t~~~~vya~GD~~~~ 269 (297)
T 3fbs_A 253 KQTTARGIFACGDVARP 269 (297)
T ss_dssp CBCSSTTEEECSGGGCT
T ss_pred CccCCCCEEEEeecCCc
Confidence 46889999999997763
No 33
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=53.12 E-value=6.2 Score=27.36 Aligned_cols=13 Identities=23% Similarity=0.386 Sum_probs=11.4
Q ss_pred CCCCCCCEEEecC
Q 034479 54 QKTPVKNFFLAGS 66 (93)
Q Consensus 54 ~~T~~~nLfLAGD 66 (93)
.+|..+|+|.+||
T Consensus 310 ~~t~~~~vya~Gd 322 (357)
T 4a9w_A 310 RALAVPSVWLLGY 322 (357)
T ss_dssp BBSSCTTEEECSS
T ss_pred cCCCCCCeEEecc
Confidence 5789999999994
No 34
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=52.78 E-value=19 Score=29.28 Aligned_cols=57 Identities=14% Similarity=0.242 Sum_probs=34.1
Q ss_pred HHHHHHHHHCCCCCCCceeeEEEEEeCCceecCCCCCCCCCCCCCCC-CCCEEEecCcccc-Cc
Q 034479 11 RVAKQVLALFPSSQGLEVIWSSFVKIGQSLCGEGPGKDPFRRDQKTP-VKNFFLAGSYTKQ-IV 72 (93)
Q Consensus 11 ~v~~eL~~~~P~~~~a~v~~~~Vire~~Atf~~~PG~~~~RP~~~T~-~~nLfLAGDwt~t-~~ 72 (93)
.+..++-+..|....+++...-+-. +=.|.. |-. ..|.-+|. ++|||+||+...+ ||
T Consensus 346 ~~Q~~~~~~ipGle~a~~~r~Gy~i--eyd~i~-p~~--l~~tLe~k~~~gLf~AGqinGt~Gy 404 (637)
T 2zxi_A 346 EVQWEMYRSIPGLENVVLIRPAYAI--EYDVVP-PTE--LYPTLETKKIRGLFHAGNFNGTTGY 404 (637)
T ss_dssp HHHHHHHTTSTTCTTCCEEECCEEE--EEEECC-GGG--BCTTSBBSSSBTEEECGGGGTBCSH
T ss_pred HHHHHHHhhCcCcccceEecccccc--ccceEc-hhh--cCccccccCCCCEEEeeecCCcchH
Confidence 3455667778887777764332221 112333 432 45666775 8999999988764 44
No 35
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=52.76 E-value=6.4 Score=26.90 Aligned_cols=18 Identities=33% Similarity=0.528 Sum_probs=14.4
Q ss_pred CCCCCCCCEEEecCcccc
Q 034479 53 DQKTPVKNFFLAGSYTKQ 70 (93)
Q Consensus 53 ~~~T~~~nLfLAGDwt~t 70 (93)
..+|..+|+|.+||-+..
T Consensus 271 ~~~t~~~~v~a~GD~~~~ 288 (315)
T 3r9u_A 271 KMQTSVAGLFAAGDLRKD 288 (315)
T ss_dssp TCBCSSTTEEECGGGBTT
T ss_pred CcccCCCCEEEeecccCC
Confidence 446788999999998753
No 36
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=52.25 E-value=4.2 Score=31.96 Aligned_cols=56 Identities=11% Similarity=0.238 Sum_probs=36.5
Q ss_pred HHHHHHHHHCCCCCCCceeeEEEEEeCCceecCCCCCCCCCCCCCC-CCCCEEEecCcccc
Q 034479 11 RVAKQVLALFPSSQGLEVIWSSFVKIGQSLCGEGPGKDPFRRDQKT-PVKNFFLAGSYTKQ 70 (93)
Q Consensus 11 ~v~~eL~~~~P~~~~a~v~~~~Vire~~Atf~~~PG~~~~RP~~~T-~~~nLfLAGDwt~t 70 (93)
.+..++-+..|....+.++..-+.. +=+|...|-. +.+.-+| .++|||+||+.+.+
T Consensus 284 ~~Q~~~~r~IpGLE~a~~~r~G~~~--ey~~i~sP~~--L~~tle~k~~~~Lf~AGqi~G~ 340 (443)
T 3g5s_A 284 PEQKRLIQMIPGLENAEIVRYGVMH--RNTYLNAPRL--LGETLEFREAEGLYAAGVLAGV 340 (443)
T ss_dssp HHHHHHHTTSTTCTTCCEEECCEEE--EEEEECHHHH--BCTTSEETTEEEEEECGGGGTB
T ss_pred HHHHHHHhcCcChhhCeeeeCcEee--cCceecChhH--hChhceecCCCCEEECcccccc
Confidence 3456677888988777775433332 2255554543 3566666 59999999988764
No 37
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=51.77 E-value=9.2 Score=26.12 Aligned_cols=17 Identities=35% Similarity=0.493 Sum_probs=14.2
Q ss_pred CCCCCCCEEEecCcccc
Q 034479 54 QKTPVKNFFLAGSYTKQ 70 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~t 70 (93)
.+|..+|+|.+||-...
T Consensus 275 ~~t~~~~vya~GD~~~~ 291 (323)
T 3f8d_A 275 MRTSVPGVFAAGDCTSA 291 (323)
T ss_dssp CBCSSTTEEECSTTBST
T ss_pred ceecCCCEEEcceecCC
Confidence 46789999999998764
No 38
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=51.18 E-value=6.4 Score=29.90 Aligned_cols=19 Identities=11% Similarity=0.251 Sum_probs=15.9
Q ss_pred CCCCCCCCEEEecCccccC
Q 034479 53 DQKTPVKNFFLAGSYTKQI 71 (93)
Q Consensus 53 ~~~T~~~nLfLAGDwt~t~ 71 (93)
..+|+++|||-|||-+.++
T Consensus 324 ~~~t~ipgLyAaGd~a~~~ 342 (472)
T 2e5v_A 324 RGESNIVNLYAIGEVSDSG 342 (472)
T ss_dssp TCBCSSBTEEECGGGEECS
T ss_pred CCccccCCEEecchhcccc
Confidence 4578999999999998843
No 39
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=48.59 E-value=7.9 Score=26.63 Aligned_cols=16 Identities=31% Similarity=0.578 Sum_probs=13.5
Q ss_pred CCCCCCCEEEecCccc
Q 034479 54 QKTPVKNFFLAGSYTK 69 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~ 69 (93)
.+|..+|+|.+||-+.
T Consensus 273 ~~t~~~~vya~GD~~~ 288 (332)
T 3lzw_A 273 METNIEGFFAAGDICT 288 (332)
T ss_dssp SBCSSTTEEECGGGEE
T ss_pred CceecCCEEEccceec
Confidence 3578999999999875
No 40
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=48.04 E-value=10 Score=26.16 Aligned_cols=16 Identities=25% Similarity=0.474 Sum_probs=14.1
Q ss_pred CCCCCCEEEecCcccc
Q 034479 55 KTPVKNFFLAGSYTKQ 70 (93)
Q Consensus 55 ~T~~~nLfLAGDwt~t 70 (93)
+|..+|+|.+||-+..
T Consensus 275 ~t~~~~vya~GD~~~~ 290 (320)
T 1trb_A 275 QTSIPGVFAAGDVMDH 290 (320)
T ss_dssp BCSSTTEEECGGGGCS
T ss_pred cCCCCCEEEcccccCC
Confidence 6889999999998765
No 41
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=47.42 E-value=5.8 Score=28.10 Aligned_cols=17 Identities=24% Similarity=0.380 Sum_probs=14.1
Q ss_pred CCCCCCCEEEecCcccc
Q 034479 54 QKTPVKNFFLAGSYTKQ 70 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~t 70 (93)
..|.+||+|.|||-+..
T Consensus 279 ~~t~vpGv~aaGDaa~~ 295 (326)
T 3fpz_A 279 AYAGVDNMYFAGMEVAE 295 (326)
T ss_dssp ECTTSBTEEECTHHHHH
T ss_pred eEECCCCEEEEchHhcc
Confidence 46889999999997654
No 42
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=46.26 E-value=7.7 Score=26.75 Aligned_cols=16 Identities=38% Similarity=0.540 Sum_probs=13.7
Q ss_pred CCCCCCCEEEecCccc
Q 034479 54 QKTPVKNFFLAGSYTK 69 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~ 69 (93)
.+|..+|+|.+||-+.
T Consensus 295 ~~t~~~~vya~GD~~~ 310 (338)
T 3itj_A 295 SLTSVPGFFAAGDVQD 310 (338)
T ss_dssp SBCSSTTEEECGGGGC
T ss_pred cccCCCCEEEeeccCC
Confidence 4578899999999876
No 43
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=46.07 E-value=12 Score=25.60 Aligned_cols=18 Identities=39% Similarity=0.386 Sum_probs=14.5
Q ss_pred CCCCCCCEEEecCccccC
Q 034479 54 QKTPVKNFFLAGSYTKQI 71 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~t~ 71 (93)
.+|..+|+|.+||-+...
T Consensus 265 ~~t~~~~vya~GD~~~~~ 282 (310)
T 1fl2_A 265 CETNVKGVFAAGDCTTVP 282 (310)
T ss_dssp CBCSSTTEEECSTTBSCS
T ss_pred CccCCCCEEEeecccCCc
Confidence 457889999999987643
No 44
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=44.70 E-value=11 Score=25.97 Aligned_cols=17 Identities=35% Similarity=0.409 Sum_probs=14.1
Q ss_pred CCCCCCCEEEecCcccc
Q 034479 54 QKTPVKNFFLAGSYTKQ 70 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~t 70 (93)
.+|..+|+|.+||-+..
T Consensus 269 ~~t~~~~vya~GD~~~~ 285 (311)
T 2q0l_A 269 MKTNVQGLFAAGDIRIF 285 (311)
T ss_dssp CBCSSTTEEECSTTBTT
T ss_pred cccCCCCeEEcccccCc
Confidence 45789999999998874
No 45
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=44.52 E-value=11 Score=26.26 Aligned_cols=17 Identities=12% Similarity=0.270 Sum_probs=13.9
Q ss_pred CCCCCCCEEEecCcccc
Q 034479 54 QKTPVKNFFLAGSYTKQ 70 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~t 70 (93)
.+|..+|+|.+||-+..
T Consensus 275 ~~t~~~~vya~GD~~~~ 291 (335)
T 2zbw_A 275 MATSIPGVYACGDIVTY 291 (335)
T ss_dssp CBCSSTTEEECSTTEEC
T ss_pred CCCCCCCEEEecccccc
Confidence 35789999999997753
No 46
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=43.79 E-value=7.8 Score=29.02 Aligned_cols=22 Identities=18% Similarity=0.206 Sum_probs=17.0
Q ss_pred CCCCCCCCCEEEecCccccCcc
Q 034479 52 RDQKTPVKNFFLAGSYTKQIVW 73 (93)
Q Consensus 52 P~~~T~~~nLfLAGDwt~t~~p 73 (93)
...+|+.+|+|.+||-+...++
T Consensus 262 ~~~~Ts~p~IyA~GDva~~~~~ 283 (437)
T 4eqs_A 262 DKFETNVPNIYAIGDIATSHYR 283 (437)
T ss_dssp TTCBCSSTTEEECGGGEEEEBS
T ss_pred CCccCCCCCEEEEEEccCcccc
Confidence 3457899999999998865443
No 47
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=42.55 E-value=12 Score=26.56 Aligned_cols=16 Identities=31% Similarity=0.457 Sum_probs=13.4
Q ss_pred CCCCCCEEEecCcccc
Q 034479 55 KTPVKNFFLAGSYTKQ 70 (93)
Q Consensus 55 ~T~~~nLfLAGDwt~t 70 (93)
+|..+|+|.+||-+..
T Consensus 287 ~t~~~~vya~GD~~~~ 302 (360)
T 3ab1_A 287 KTSVDGLYAAGDIAYY 302 (360)
T ss_dssp BCSSTTEEECSTTEEC
T ss_pred cCCCCCEEEecCccCC
Confidence 5788999999997753
No 48
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=42.39 E-value=9.6 Score=26.46 Aligned_cols=17 Identities=29% Similarity=0.470 Sum_probs=14.3
Q ss_pred CCCCCCCEEEecCcccc
Q 034479 54 QKTPVKNFFLAGSYTKQ 70 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~t 70 (93)
.+|..+|+|.+||-+..
T Consensus 283 ~~t~~~~vya~GD~~~~ 299 (333)
T 1vdc_A 283 TQTSVPGVFAAGDVQDK 299 (333)
T ss_dssp CBCSSTTEEECGGGGCS
T ss_pred cccCCCCEEEeeeccCC
Confidence 36889999999998764
No 49
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=42.07 E-value=12 Score=25.87 Aligned_cols=17 Identities=35% Similarity=0.501 Sum_probs=14.2
Q ss_pred CCCCCCCEEEecCcccc
Q 034479 54 QKTPVKNFFLAGSYTKQ 70 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~t 70 (93)
.+|..+|+|.+||-+..
T Consensus 276 ~~t~~~~vya~GD~~~~ 292 (319)
T 3cty_A 276 QRTSVPGVYAAGDVTSG 292 (319)
T ss_dssp CBCSSTTEEECSTTBTT
T ss_pred CccCCCCEEEeecccCc
Confidence 45789999999998864
No 50
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=41.40 E-value=60 Score=23.47 Aligned_cols=59 Identities=12% Similarity=0.170 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCceeeEEEEEeCCceecCCCCCCCCCC--CCCCCCCCEEEecCccccC
Q 034479 5 NDEIIRRVAKQVLALFPSSQGLEVIWSSFVKIGQSLCGEGPGKDPFRR--DQKTPVKNFFLAGSYTKQI 71 (93)
Q Consensus 5 deel~~~v~~eL~~~~P~~~~a~v~~~~Vire~~Atf~~~PG~~~~RP--~~~T~~~nLfLAGDwt~t~ 71 (93)
.++..+.+.+.+.++||......+...++-. ...+|+. .| +.....+|||+|.-+-..|
T Consensus 306 ~~~~~~~l~~~~~~~~P~l~~~~~~~~~~g~-----~~~t~D~---~piig~~p~~~~l~~a~G~~g~G 366 (438)
T 3dje_A 306 PKEAETRVRALLKETMPQLADRPFSFARICW-----CADTANR---EFLIDRHPQYHSLVLGCGASGRG 366 (438)
T ss_dssp BHHHHHHHHHHHHHHCGGGTTCCCSEEEEEE-----EEECTTS---CCEEEECSSCTTEEEEECCTTCC
T ss_pred CHHHHHHHHHHHHHhCcccccCCcceeeEEE-----eCcCCCC---CeEEeecCCCCCEEEEECCCCcc
Confidence 3566788899999999987656655443322 2234443 22 2222368999987554433
No 51
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=41.19 E-value=13 Score=26.01 Aligned_cols=17 Identities=24% Similarity=0.432 Sum_probs=14.4
Q ss_pred CCCCCCCEEEecCcccc
Q 034479 54 QKTPVKNFFLAGSYTKQ 70 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~t 70 (93)
.+|..+|+|.+||-+..
T Consensus 276 ~~t~~~~iya~GD~~~~ 292 (335)
T 2a87_A 276 TSTSLPGVFAAGDLVDR 292 (335)
T ss_dssp SBCSSTTEEECGGGTCC
T ss_pred CccCCCCEEEeeecCCc
Confidence 36789999999998864
No 52
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=41.13 E-value=16 Score=26.52 Aligned_cols=22 Identities=18% Similarity=0.126 Sum_probs=16.5
Q ss_pred CCC-CCCCEEEecCccccCcccc
Q 034479 54 QKT-PVKNFFLAGSYTKQIVWKE 75 (93)
Q Consensus 54 ~~T-~~~nLfLAGDwt~t~~pAt 75 (93)
.+| ..+|+|.+||-+..+.|.+
T Consensus 294 ~~~~~~~~vfa~GD~~~~~~~~~ 316 (409)
T 3h8l_A 294 MVSIKYDNVYAVGDANSMTVPKL 316 (409)
T ss_dssp SBBSSCTTEEECGGGBTTCCSCC
T ss_pred cccCCCCCEEEeehhccCCCCcH
Confidence 345 7899999999987655543
No 53
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=40.58 E-value=16 Score=28.05 Aligned_cols=20 Identities=35% Similarity=0.360 Sum_probs=15.7
Q ss_pred CCCCCCCCEEEecCccccCc
Q 034479 53 DQKTPVKNFFLAGSYTKQIV 72 (93)
Q Consensus 53 ~~~T~~~nLfLAGDwt~t~~ 72 (93)
..+|..+|+|.|||-+...+
T Consensus 475 ~~~ts~p~VfA~GD~~~~~~ 494 (521)
T 1hyu_A 475 KCETSVKGVFAAGDCTTVPY 494 (521)
T ss_dssp TCBCSSTTEEECSTTBCCSS
T ss_pred CCCCCCCCEEEeecccCCCc
Confidence 34578899999999887543
No 54
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=40.49 E-value=38 Score=27.53 Aligned_cols=55 Identities=11% Similarity=0.256 Sum_probs=32.2
Q ss_pred HHHHHHHHHCCCCCCCceeeEEEEEeCCceecCCCCCCCCCCCCCC-CCCCEEEecCcccc
Q 034479 11 RVAKQVLALFPSSQGLEVIWSSFVKIGQSLCGEGPGKDPFRRDQKT-PVKNFFLAGSYTKQ 70 (93)
Q Consensus 11 ~v~~eL~~~~P~~~~a~v~~~~Vire~~Atf~~~PG~~~~RP~~~T-~~~nLfLAGDwt~t 70 (93)
.+..++-+..|....+++...-.-. +-.|.. |-. ..|.-+| .++|||+||..+.+
T Consensus 341 ~~q~~~~~~ipGle~a~i~r~Gy~i--eyd~i~-p~~--L~~tle~k~~~gLf~AGqinGt 396 (651)
T 3ces_A 341 DVQMQIVRSMQGMENAKIVRPGYAI--EYDFFD-PRD--LKPTLESKFIQGLFFAGQINGT 396 (651)
T ss_dssp HHHHHHHHTSTTCTTCCEEECCEEE--EEEEEC-GGG--BCTTSBBSSSBTEEECSGGGTC
T ss_pred HHHHHHHhhCCCccceEEEecccee--ccCccc-hhh--cCccccccCCCCeEEEEEecCC
Confidence 3455666777887777754321111 112333 333 3466666 58999999988764
No 55
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=39.85 E-value=12 Score=26.05 Aligned_cols=16 Identities=25% Similarity=0.341 Sum_probs=13.7
Q ss_pred CCCCCCEEEecCcccc
Q 034479 55 KTPVKNFFLAGSYTKQ 70 (93)
Q Consensus 55 ~T~~~nLfLAGDwt~t 70 (93)
+|..+|+|.+||-+..
T Consensus 273 ~t~~~~vya~GD~~~~ 288 (325)
T 2q7v_A 273 YTNIPMLFAAGDVSDY 288 (325)
T ss_dssp BCSSTTEEECSTTTCS
T ss_pred ccCCCCEEEeecccCc
Confidence 5788999999998764
No 56
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=38.54 E-value=39 Score=27.39 Aligned_cols=53 Identities=23% Similarity=0.286 Sum_probs=30.2
Q ss_pred HHHHHHHCCCCCCCceeeEEEEEeCCceecCCCCCCCCCCCCCC-CCCCEEEecCcccc
Q 034479 13 AKQVLALFPSSQGLEVIWSSFVKIGQSLCGEGPGKDPFRRDQKT-PVKNFFLAGSYTKQ 70 (93)
Q Consensus 13 ~~eL~~~~P~~~~a~v~~~~Vire~~Atf~~~PG~~~~RP~~~T-~~~nLfLAGDwt~t 70 (93)
..++.+.+|....+.+..--+..+ -++.. |-. ..+.-+| .++|||+||+-+.+
T Consensus 337 q~~~~~~i~gle~a~~~~~G~~~~--y~~i~-p~~--l~~tle~k~~~gLf~AGqi~g~ 390 (641)
T 3cp8_A 337 QIAGLRSIPGLEEAKMIRPGYAIE--YDFFH-PWQ--IRSTMETRPVENLFFAGQINGT 390 (641)
T ss_dssp HHHHHTTSTTCTTCCEEECCEEEE--EEEEC-GGG--BCTTSBBSSSBTEEECSGGGTB
T ss_pred HHHHHhcCcchhhceEecceeeec--ceEEC-HHH--cCCcccccCcCCEEEEEeecCC
Confidence 344555667776666543322221 01222 322 3456666 59999999998875
No 57
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=37.98 E-value=17 Score=26.25 Aligned_cols=20 Identities=10% Similarity=0.031 Sum_probs=15.1
Q ss_pred CCCCCCEEEecCcccc-Cccc
Q 034479 55 KTPVKNFFLAGSYTKQ-IVWK 74 (93)
Q Consensus 55 ~T~~~nLfLAGDwt~t-~~pA 74 (93)
+|..+|+|.+||-+.. +.|.
T Consensus 283 ~t~~p~VfAiGDva~~~~~pk 303 (401)
T 3vrd_B 283 SSLQPGIHVIGDACNAAPMPK 303 (401)
T ss_dssp BSSSTTEEECGGGBCCTTSCB
T ss_pred ecCCCCEEEecccccCCCCCc
Confidence 5889999999997753 3443
No 58
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=34.65 E-value=12 Score=24.30 Aligned_cols=35 Identities=17% Similarity=0.129 Sum_probs=19.8
Q ss_pred CCCEEEecCccccC-ccc----ceeccccCCcccccCCCC
Q 034479 58 VKNFFLAGSYTKQI-VWK----EQLCLVDKPQATYAMPGK 92 (93)
Q Consensus 58 ~~nLfLAGDwt~t~-~pA----t~~~~~~~~~~~~~~~~~ 92 (93)
.+=++++||.+..+ -+. ...-+.+.+...|.++|.
T Consensus 33 ~D~vi~~GDl~~~~~~~~~~~~~~~~l~~~~~pv~~v~GN 72 (228)
T 1uf3_A 33 ADAIALIGNLMPKAAKSRDYAAFFRILSEAHLPTAYVPGP 72 (228)
T ss_dssp CSEEEEESCSSCTTCCHHHHHHHHHHHGGGCSCEEEECCT
T ss_pred CCEEEECCCCCCCCCCHHHHHHHHHHHHhcCCcEEEECCC
Confidence 34599999999866 222 111122223347888885
No 59
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=34.65 E-value=18 Score=26.79 Aligned_cols=17 Identities=29% Similarity=0.520 Sum_probs=14.5
Q ss_pred CCCCCCCCEEEecCccc
Q 034479 53 DQKTPVKNFFLAGSYTK 69 (93)
Q Consensus 53 ~~~T~~~nLfLAGDwt~ 69 (93)
..+|..+|+|.+||-+.
T Consensus 267 ~~~t~~~~IyA~GD~~~ 283 (449)
T 3kd9_A 267 KMQTSVENVYAAGDVAE 283 (449)
T ss_dssp TCBCSSTTEEECSTTBC
T ss_pred CCccCCCCEEEeeeeee
Confidence 34689999999999875
No 60
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=34.45 E-value=14 Score=24.87 Aligned_cols=13 Identities=8% Similarity=0.325 Sum_probs=11.9
Q ss_pred CCCCCEEEecCcc
Q 034479 56 TPVKNFFLAGSYT 68 (93)
Q Consensus 56 T~~~nLfLAGDwt 68 (93)
|.+||||.+||-.
T Consensus 196 t~~p~iya~G~~a 208 (232)
T 2cul_A 196 KRLEGLYAVGLCV 208 (232)
T ss_dssp TTSBSEEECGGGT
T ss_pred cccccceeeeecc
Confidence 7899999999977
No 61
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=33.58 E-value=20 Score=25.13 Aligned_cols=17 Identities=24% Similarity=0.456 Sum_probs=13.8
Q ss_pred CCCCCCCEEEecCcccc
Q 034479 54 QKTPVKNFFLAGSYTKQ 70 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~t 70 (93)
.+|..+|+|.+||-+..
T Consensus 296 ~~t~~~~v~a~GD~~~~ 312 (369)
T 3d1c_A 296 ESTRYPNIFMIGATVEN 312 (369)
T ss_dssp BBSSSTTEEECSTTCCC
T ss_pred cccCCCCeEEecccccc
Confidence 35788999999998764
No 62
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=33.45 E-value=20 Score=26.49 Aligned_cols=16 Identities=31% Similarity=0.320 Sum_probs=13.5
Q ss_pred CCCCCCEEEecCcccc
Q 034479 55 KTPVKNFFLAGSYTKQ 70 (93)
Q Consensus 55 ~T~~~nLfLAGDwt~t 70 (93)
.|..+|+|-+||-+.-
T Consensus 283 ~t~~~~IfAiGD~a~~ 298 (430)
T 3hyw_A 283 NPTYKNIFGVGVVTAI 298 (430)
T ss_dssp CSSSTTEEECSTTBCC
T ss_pred CCCCCCEEEeccEEec
Confidence 3789999999998863
No 63
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=33.24 E-value=16 Score=28.25 Aligned_cols=19 Identities=16% Similarity=0.331 Sum_probs=15.2
Q ss_pred CCCCCCCCCEEEecCcccc
Q 034479 52 RDQKTPVKNFFLAGSYTKQ 70 (93)
Q Consensus 52 P~~~T~~~nLfLAGDwt~t 70 (93)
...+|+++|||-||+-..+
T Consensus 361 ~~~~t~I~GLyAaGE~a~~ 379 (540)
T 1chu_A 361 DHGRTDVEGLYAIGEVSYT 379 (540)
T ss_dssp TTCBCSSBTEEECGGGEEC
T ss_pred CCCCCccCCEEeccccccc
Confidence 3445899999999998754
No 64
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=31.16 E-value=16 Score=27.22 Aligned_cols=17 Identities=18% Similarity=0.303 Sum_probs=14.3
Q ss_pred CCCCCCCEEEecCcccc
Q 034479 54 QKTPVKNFFLAGSYTKQ 70 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~t 70 (93)
.+|..+|+|.+||-+..
T Consensus 282 ~~t~~~~Iya~GD~~~~ 298 (472)
T 3iwa_A 282 MRTSDPDIFAGGDCVTI 298 (472)
T ss_dssp CBCSSTTEEECGGGEEE
T ss_pred cccCCCCEEEeccceec
Confidence 56889999999998853
No 65
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=30.95 E-value=17 Score=27.03 Aligned_cols=18 Identities=28% Similarity=0.401 Sum_probs=14.9
Q ss_pred CCCCCCCEEEecCccccC
Q 034479 54 QKTPVKNFFLAGSYTKQI 71 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~t~ 71 (93)
.+|..+|+|.+||-+...
T Consensus 267 ~~t~~~~IyA~GD~~~~~ 284 (452)
T 3oc4_A 267 LQTSVPNVFAIGDCISVM 284 (452)
T ss_dssp CBCSSTTEEECGGGBCEE
T ss_pred ccCCCCCEEEEEeeEEec
Confidence 467899999999988754
No 66
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=30.93 E-value=19 Score=26.04 Aligned_cols=16 Identities=19% Similarity=0.366 Sum_probs=13.9
Q ss_pred CCCCCCCEEEecCccc
Q 034479 54 QKTPVKNFFLAGSYTK 69 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~ 69 (93)
.+|..+|+|.+||-+.
T Consensus 265 ~~t~~~~IyA~GD~~~ 280 (384)
T 2v3a_A 265 LRTSHANIYALGDCAE 280 (384)
T ss_dssp CBCSSTTEEECGGGEE
T ss_pred CCCCCCCEEEeeeeee
Confidence 4688999999999985
No 67
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=30.80 E-value=20 Score=27.14 Aligned_cols=16 Identities=25% Similarity=0.451 Sum_probs=13.9
Q ss_pred CCCCCCCEEEecCccc
Q 034479 54 QKTPVKNFFLAGSYTK 69 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~ 69 (93)
.+|..+|+|.+||-+.
T Consensus 405 ~~Ts~~~VfA~GD~~~ 420 (456)
T 2vdc_G 405 KMTNMDGVFAAGDIVR 420 (456)
T ss_dssp CBCSSTTEEECGGGGS
T ss_pred CcCCCCCEEEeccccC
Confidence 5688999999999875
No 68
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=30.43 E-value=21 Score=25.25 Aligned_cols=63 Identities=11% Similarity=0.030 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCceeeEEEEEeCCceecCCCCCCCCCCCC--CCCCCCEEEecCccccCcccc
Q 034479 5 NDEIIRRVAKQVLALFPSSQGLEVIWSSFVKIGQSLCGEGPGKDPFRRDQ--KTPVKNFFLAGSYTKQIVWKE 75 (93)
Q Consensus 5 deel~~~v~~eL~~~~P~~~~a~v~~~~Vire~~Atf~~~PG~~~~RP~~--~T~~~nLfLAGDwt~t~~pAt 75 (93)
+++..+.+.+.+.+++|......+...++ .....+|+. .|-. ....+|||+|+.+...|+--.
T Consensus 284 ~~~~~~~l~~~~~~~~p~l~~~~~~~~w~-----g~~~~t~d~---~p~ig~~~~~~~l~~~~G~~g~G~~~a 348 (382)
T 1ryi_A 284 DLGGLESVMKKAKTMLPAIQNMKVDRFWA-----GLRPGTKDG---KPYIGRHPEDSRILFAAGHFRNGILLA 348 (382)
T ss_dssp CHHHHHHHHHHHHHHCGGGGGSEEEEEEE-----EEEEECSSS---CCEEEEETTEEEEEEEECCSSCTTTTH
T ss_pred CHHHHHHHHHHHHHhCCCcCCCceeeEEE-----EecccCCCC---CcEeccCCCcCCEEEEEcCCcchHHHh
Confidence 45667889999999999754444433322 222233432 3321 113578999887766555443
No 69
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=29.68 E-value=20 Score=26.77 Aligned_cols=16 Identities=31% Similarity=0.378 Sum_probs=13.6
Q ss_pred CCCCCCCCEEEecCcc
Q 034479 53 DQKTPVKNFFLAGSYT 68 (93)
Q Consensus 53 ~~~T~~~nLfLAGDwt 68 (93)
..+|..+|+|.+||-+
T Consensus 318 ~~~t~~~~IyA~GD~~ 333 (478)
T 3dk9_A 318 FQNTNVKGIYAVGDVC 333 (478)
T ss_dssp TCBCSSTTEEECGGGG
T ss_pred CcccCCCCEEEEEecC
Confidence 3468899999999987
No 70
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=29.52 E-value=20 Score=27.23 Aligned_cols=17 Identities=12% Similarity=0.153 Sum_probs=14.3
Q ss_pred CCCCCCCCEEEecCccc
Q 034479 53 DQKTPVKNFFLAGSYTK 69 (93)
Q Consensus 53 ~~~T~~~nLfLAGDwt~ 69 (93)
..+|..+|+|.+||-+.
T Consensus 290 ~~~t~~~~IyA~GD~~~ 306 (565)
T 3ntd_A 290 MMQTSDPAIYAVGDAVE 306 (565)
T ss_dssp TCBCSSTTEEECGGGBC
T ss_pred CcccCCCCEEEeeeeEe
Confidence 35688999999999875
No 71
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=28.99 E-value=22 Score=26.66 Aligned_cols=17 Identities=24% Similarity=0.380 Sum_probs=14.2
Q ss_pred CCCCCCCCEEEecCccc
Q 034479 53 DQKTPVKNFFLAGSYTK 69 (93)
Q Consensus 53 ~~~T~~~nLfLAGDwt~ 69 (93)
..+|..+|+|.+||-+.
T Consensus 313 ~~~t~~~~IyA~GD~~~ 329 (483)
T 3dgh_A 313 QEATNVANIYAVGDIIY 329 (483)
T ss_dssp TCBCSSTTEEECSTTBT
T ss_pred CCccCCCCEEEEEcccC
Confidence 35688999999999874
No 72
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=28.90 E-value=21 Score=26.58 Aligned_cols=17 Identities=18% Similarity=0.245 Sum_probs=14.0
Q ss_pred CCCCCCCCEEEecCccc
Q 034479 53 DQKTPVKNFFLAGSYTK 69 (93)
Q Consensus 53 ~~~T~~~nLfLAGDwt~ 69 (93)
..+|..+|+|.+||-+.
T Consensus 305 ~~~t~~~~Iya~GD~~~ 321 (476)
T 3lad_A 305 YCATSVPGVYAIGDVVR 321 (476)
T ss_dssp TSBCSSTTEEECGGGSS
T ss_pred CcccCCCCEEEEEccCC
Confidence 34688999999999874
No 73
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=28.68 E-value=21 Score=26.81 Aligned_cols=17 Identities=18% Similarity=0.413 Sum_probs=14.1
Q ss_pred CCCCCCCCEEEecCccc
Q 034479 53 DQKTPVKNFFLAGSYTK 69 (93)
Q Consensus 53 ~~~T~~~nLfLAGDwt~ 69 (93)
..+|..+|+|.+||-+.
T Consensus 313 ~~~t~~~~IyA~GD~~~ 329 (488)
T 3dgz_A 313 QEATSVPHIYAIGDVAE 329 (488)
T ss_dssp TSBCSSTTEEECGGGBT
T ss_pred CCccCCCCEEEeEEecC
Confidence 34688999999999874
No 74
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=28.33 E-value=22 Score=27.99 Aligned_cols=19 Identities=21% Similarity=0.441 Sum_probs=15.3
Q ss_pred CCCCCCCCCEEEecCcccc
Q 034479 52 RDQKTPVKNFFLAGSYTKQ 70 (93)
Q Consensus 52 P~~~T~~~nLfLAGDwt~t 70 (93)
...+|+|+|||-||+-..+
T Consensus 366 ~~~~~~IpGLyAaGe~a~~ 384 (602)
T 1kf6_A 366 QNCETRIKGLFAVGECSSV 384 (602)
T ss_dssp TTSBCSSBTEEECGGGEEC
T ss_pred CCCccccCCEEEccccccc
Confidence 4467799999999998743
No 75
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=28.31 E-value=22 Score=26.72 Aligned_cols=17 Identities=12% Similarity=0.339 Sum_probs=14.0
Q ss_pred CCCCCCCCEEEecCccc
Q 034479 53 DQKTPVKNFFLAGSYTK 69 (93)
Q Consensus 53 ~~~T~~~nLfLAGDwt~ 69 (93)
..+|..+|+|.+||-+.
T Consensus 325 ~~~t~~~~IyA~GD~~~ 341 (491)
T 3urh_A 325 HFQTSIAGVYAIGDVVR 341 (491)
T ss_dssp TCBCSSTTEEECGGGSS
T ss_pred CCCCCCCCEEEEEecCC
Confidence 35688999999999874
No 76
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=28.27 E-value=22 Score=26.49 Aligned_cols=17 Identities=18% Similarity=0.272 Sum_probs=14.2
Q ss_pred CCCCCCCCEEEecCccc
Q 034479 53 DQKTPVKNFFLAGSYTK 69 (93)
Q Consensus 53 ~~~T~~~nLfLAGDwt~ 69 (93)
..+|..+|+|.+||-+.
T Consensus 293 ~~~t~~~~iya~GD~~~ 309 (463)
T 4dna_A 293 FSRTSTPGIYALGDVTD 309 (463)
T ss_dssp TCBCSSTTEEECSGGGS
T ss_pred CCCCCCCCEEEEEecCC
Confidence 34688999999999775
No 77
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=28.11 E-value=22 Score=26.54 Aligned_cols=18 Identities=28% Similarity=0.359 Sum_probs=14.6
Q ss_pred CCCCCCCCEEEecCcccc
Q 034479 53 DQKTPVKNFFLAGSYTKQ 70 (93)
Q Consensus 53 ~~~T~~~nLfLAGDwt~t 70 (93)
..+|..+|+|.+||-+..
T Consensus 295 ~~~t~~~~Iya~GD~~~~ 312 (466)
T 3l8k_A 295 TMKTNIPNVFATGDANGL 312 (466)
T ss_dssp TCBCSSTTEEECGGGTCS
T ss_pred CccCCCCCEEEEEecCCC
Confidence 346788999999998764
No 78
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=27.99 E-value=25 Score=26.01 Aligned_cols=14 Identities=14% Similarity=0.415 Sum_probs=12.1
Q ss_pred CCCCCEEEecCccc
Q 034479 56 TPVKNFFLAGSYTK 69 (93)
Q Consensus 56 T~~~nLfLAGDwt~ 69 (93)
+.+||||+||+-++
T Consensus 361 ~~~~gly~~GE~ld 374 (401)
T 2gqf_A 361 NQVSGLYFIGEVLD 374 (401)
T ss_dssp SSSTTEEECGGGBS
T ss_pred cCCCCEEEEEEeEE
Confidence 57999999998776
No 79
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=27.88 E-value=22 Score=25.89 Aligned_cols=19 Identities=11% Similarity=0.274 Sum_probs=15.6
Q ss_pred CCCCCCCEEEecCccccCc
Q 034479 54 QKTPVKNFFLAGSYTKQIV 72 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~t~~ 72 (93)
.+|..+|+|.+||-+....
T Consensus 273 ~~t~~~~iyA~GD~a~~~~ 291 (415)
T 3lxd_A 273 CRTSLTDVYAIGDCAAHAN 291 (415)
T ss_dssp CBCSSTTEEECGGGEEEEC
T ss_pred CCcCCCCEEEEEeeeeecC
Confidence 4688999999999887544
No 80
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=27.84 E-value=22 Score=26.37 Aligned_cols=16 Identities=19% Similarity=0.341 Sum_probs=13.7
Q ss_pred CCCCCCCEEEecCccc
Q 034479 54 QKTPVKNFFLAGSYTK 69 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~ 69 (93)
.+|..+|+|.+||-+.
T Consensus 297 ~~t~~~~IyA~GD~~~ 312 (464)
T 2a8x_A 297 MRTNVGHIYAIGDVNG 312 (464)
T ss_dssp SBCSSTTEEECGGGGC
T ss_pred CccCCCCEEEeECcCC
Confidence 4688999999999875
No 81
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=27.58 E-value=23 Score=25.79 Aligned_cols=19 Identities=11% Similarity=-0.139 Sum_probs=15.5
Q ss_pred CCCCCCCEEEecCccccCc
Q 034479 54 QKTPVKNFFLAGSYTKQIV 72 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~t~~ 72 (93)
.+|..+|+|.+||-+....
T Consensus 263 ~~t~~~~iya~GD~a~~~~ 281 (404)
T 3fg2_P 263 LLTSDPHISAIGDCALFES 281 (404)
T ss_dssp SBCSSTTEEECGGGEEEEE
T ss_pred cccCCCCEEEeecceeecC
Confidence 4688999999999887544
No 82
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=27.30 E-value=23 Score=26.56 Aligned_cols=17 Identities=24% Similarity=0.331 Sum_probs=14.2
Q ss_pred CCCCCCCCEEEecCccc
Q 034479 53 DQKTPVKNFFLAGSYTK 69 (93)
Q Consensus 53 ~~~T~~~nLfLAGDwt~ 69 (93)
..+|..+|+|.+||-+.
T Consensus 313 ~~~t~~~~Iya~GD~~~ 329 (484)
T 3o0h_A 313 KMTTNVSHIWAVGDVTG 329 (484)
T ss_dssp TSBCSSTTEEECGGGGT
T ss_pred CCCCCCCCEEEEEecCC
Confidence 34588999999999875
No 83
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=27.21 E-value=24 Score=25.63 Aligned_cols=17 Identities=18% Similarity=0.362 Sum_probs=14.2
Q ss_pred CCCCCCCEEEecCcccc
Q 034479 54 QKTPVKNFFLAGSYTKQ 70 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~t 70 (93)
.+|..+|+|.+||-+..
T Consensus 256 ~~t~~~~IyA~GD~a~~ 272 (367)
T 1xhc_A 256 FRTSAKDVYAIGDCAEY 272 (367)
T ss_dssp SBCSSTTEEECGGGEEB
T ss_pred cccCCCCEEEeEeeeec
Confidence 46889999999998753
No 84
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=26.87 E-value=36 Score=24.97 Aligned_cols=18 Identities=28% Similarity=0.209 Sum_probs=14.5
Q ss_pred CCC-CCCCEEEecCccccC
Q 034479 54 QKT-PVKNFFLAGSYTKQI 71 (93)
Q Consensus 54 ~~T-~~~nLfLAGDwt~t~ 71 (93)
.+| ..+|+|.+||-+...
T Consensus 281 l~t~~~~~Ifa~GD~~~~~ 299 (430)
T 3h28_A 281 FQNPTYKNIFGVGVVTAIP 299 (430)
T ss_dssp SBCSSSTTEEECSTTBCCC
T ss_pred ccCCCCCCEEEEEeeeccC
Confidence 345 899999999988754
No 85
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=26.77 E-value=25 Score=25.99 Aligned_cols=17 Identities=18% Similarity=0.341 Sum_probs=14.4
Q ss_pred CCCCCCCEEEecCcccc
Q 034479 54 QKTPVKNFFLAGSYTKQ 70 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~t 70 (93)
.+|..+|+|.+||-+..
T Consensus 270 ~~t~~~~IyA~GD~~~~ 286 (452)
T 2cdu_A 270 MHSSNRDIFAAGDSAAV 286 (452)
T ss_dssp SBCSSTTEEECSTTBCE
T ss_pred cCcCCCCEEEcceEEEe
Confidence 45788999999999874
No 86
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=26.72 E-value=25 Score=26.02 Aligned_cols=16 Identities=19% Similarity=0.231 Sum_probs=13.5
Q ss_pred CCCCCCCEEEecCccc
Q 034479 54 QKTPVKNFFLAGSYTK 69 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~ 69 (93)
.+|..+|+|.+||-+.
T Consensus 305 ~~t~~~~Iya~GD~~~ 320 (470)
T 1dxl_A 305 FSTNVSGVYAIGDVIP 320 (470)
T ss_dssp CBCSSTTEEECSTTSS
T ss_pred CccCCCCEEEEeccCC
Confidence 4578899999999875
No 87
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=26.57 E-value=19 Score=26.68 Aligned_cols=20 Identities=10% Similarity=-0.001 Sum_probs=15.7
Q ss_pred CCCCCCCEEEecCccccCcc
Q 034479 54 QKTPVKNFFLAGSYTKQIVW 73 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~t~~p 73 (93)
.+|..+|+|.+||-+....+
T Consensus 272 ~~ts~~~IyA~GD~~~~~~~ 291 (431)
T 1q1r_A 272 MQTSDPLIMAVGDCARFHSQ 291 (431)
T ss_dssp SBCSSTTEEECGGGEEEEET
T ss_pred cccCCCCEEEEEeEEEEccc
Confidence 36889999999998875433
No 88
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=26.41 E-value=24 Score=26.89 Aligned_cols=16 Identities=19% Similarity=0.347 Sum_probs=13.6
Q ss_pred CCCCCCCEEEecCccc
Q 034479 54 QKTPVKNFFLAGSYTK 69 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~ 69 (93)
.+|..+|+|.+||-+.
T Consensus 342 ~~Ts~~~IyA~GD~~~ 357 (519)
T 3qfa_A 342 EQTNVPYIYAIGDILE 357 (519)
T ss_dssp SBCSSTTEEECGGGBS
T ss_pred CccCCCCEEEEEeccC
Confidence 4688999999999873
No 89
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=26.04 E-value=25 Score=25.71 Aligned_cols=17 Identities=24% Similarity=0.216 Sum_probs=14.5
Q ss_pred CCCCCCEEEecCccccC
Q 034479 55 KTPVKNFFLAGSYTKQI 71 (93)
Q Consensus 55 ~T~~~nLfLAGDwt~t~ 71 (93)
+|..+|+|.+||-+...
T Consensus 264 ~t~~~~IyA~GD~a~~~ 280 (410)
T 3ef6_A 264 ATLAKGVFAVGDVASWP 280 (410)
T ss_dssp BCSSTTEEECGGGEEEE
T ss_pred eECCCCEEEEEcceecc
Confidence 68899999999987643
No 90
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=25.81 E-value=26 Score=25.71 Aligned_cols=19 Identities=21% Similarity=0.317 Sum_probs=15.4
Q ss_pred CCCCCCCEEEecCccccCc
Q 034479 54 QKTPVKNFFLAGSYTKQIV 72 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~t~~ 72 (93)
.+|..+|+|.+||-+....
T Consensus 261 ~~t~~~~IyA~GD~~~~~~ 279 (408)
T 2gqw_A 261 GRTTCPDVYALGDVTRQRN 279 (408)
T ss_dssp CBCSSTTEEECGGGEEEEE
T ss_pred CccCCCCEEEEEEEEEecC
Confidence 3688999999999887543
No 91
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=25.69 E-value=25 Score=26.98 Aligned_cols=17 Identities=12% Similarity=0.190 Sum_probs=14.4
Q ss_pred CCCCCCCCEEEecCccc
Q 034479 53 DQKTPVKNFFLAGSYTK 69 (93)
Q Consensus 53 ~~~T~~~nLfLAGDwt~ 69 (93)
..+|..+|+|.+||-+.
T Consensus 305 ~~~t~~~~IyA~GD~~~ 321 (588)
T 3ics_A 305 KFQTSDPHIYAIGDAIE 321 (588)
T ss_dssp TSBCSSTTEEECGGGBC
T ss_pred ccccCCCCEEEeeeeee
Confidence 45688999999999885
No 92
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=25.29 E-value=18 Score=27.85 Aligned_cols=19 Identities=26% Similarity=0.405 Sum_probs=14.8
Q ss_pred CCCCCEEEecCccccCccc
Q 034479 56 TPVKNFFLAGSYTKQIVWK 74 (93)
Q Consensus 56 T~~~nLfLAGDwt~t~~pA 74 (93)
++|+|||-||+-+..-+.+
T Consensus 519 ~~I~GLyAaGe~~~g~~g~ 537 (566)
T 1qo8_A 519 KPIDGLFAAGEVTGGVHGY 537 (566)
T ss_dssp CEEEEEEECSTTBCSSSTT
T ss_pred CEeCCEEecccccCCCCCC
Confidence 7999999999977554443
No 93
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=25.28 E-value=26 Score=26.24 Aligned_cols=16 Identities=31% Similarity=0.405 Sum_probs=13.5
Q ss_pred CCCCCCCEEEecCccc
Q 034479 54 QKTPVKNFFLAGSYTK 69 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~ 69 (93)
.+|..+|+|.+||-+.
T Consensus 310 ~~t~~~~IyA~GD~~~ 325 (479)
T 2hqm_A 310 QNTNVPNIYSLGDVVG 325 (479)
T ss_dssp CBCSSTTEEECGGGTT
T ss_pred CccCCCCEEEEEecCC
Confidence 3688999999999864
No 94
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=25.12 E-value=30 Score=25.70 Aligned_cols=16 Identities=13% Similarity=0.333 Sum_probs=13.8
Q ss_pred CCCCCCCEEEecCccc
Q 034479 54 QKTPVKNFFLAGSYTK 69 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~ 69 (93)
.+|..+|+|.+||-+.
T Consensus 302 ~~t~~~~IyA~GD~~~ 317 (468)
T 2qae_A 302 FETSIPDVYAIGDVVD 317 (468)
T ss_dssp SBCSSTTEEECGGGBS
T ss_pred cccCCCCEEEeeccCC
Confidence 4678999999999876
No 95
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=25.05 E-value=27 Score=25.96 Aligned_cols=16 Identities=25% Similarity=0.457 Sum_probs=13.7
Q ss_pred CCCCCCCEEEecCccc
Q 034479 54 QKTPVKNFFLAGSYTK 69 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~ 69 (93)
.+|..+|+|.+||-+.
T Consensus 291 ~~t~~~~IyA~GD~~~ 306 (450)
T 1ges_A 291 QNTNIEGIYAVGDNTG 306 (450)
T ss_dssp SBCSSTTEEECSGGGT
T ss_pred CccCCCCEEEEeccCC
Confidence 3688999999999875
No 96
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=25.02 E-value=33 Score=26.28 Aligned_cols=25 Identities=12% Similarity=-0.033 Sum_probs=19.3
Q ss_pred CCCCC-CCCCEEEecCccccCcccce
Q 034479 52 RDQKT-PVKNFFLAGSYTKQIVWKEQ 76 (93)
Q Consensus 52 P~~~T-~~~nLfLAGDwt~t~~pAt~ 76 (93)
+..+| ..+|+|.+||-...++|.+.
T Consensus 357 ~~lq~~~~~~IfAiGD~a~~~~p~~a 382 (502)
T 4g6h_A 357 DFLQVKGSNNIFAIGDNAFAGLPPTA 382 (502)
T ss_dssp TTSBBTTCSSEEECGGGEESSSCCCH
T ss_pred CccccCCCCCEEEEEcccCCCCCCch
Confidence 34455 78999999998888877664
No 97
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=24.69 E-value=28 Score=25.78 Aligned_cols=16 Identities=31% Similarity=0.451 Sum_probs=13.5
Q ss_pred CCCCCCCEEEecCccc
Q 034479 54 QKTPVKNFFLAGSYTK 69 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~ 69 (93)
.+|..+|+|.+||-+.
T Consensus 296 ~~t~~~~Iya~GD~~~ 311 (455)
T 1ebd_A 296 CRTSVPNIFAIGDIVP 311 (455)
T ss_dssp CBCSSTTEEECGGGSS
T ss_pred cccCCCCEEEEeccCC
Confidence 4578899999999875
No 98
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=24.39 E-value=28 Score=25.87 Aligned_cols=16 Identities=13% Similarity=0.098 Sum_probs=13.7
Q ss_pred CCCCCCCEEEecCccc
Q 034479 54 QKTPVKNFFLAGSYTK 69 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~ 69 (93)
.+|..+|+|.+||-+.
T Consensus 313 ~~t~~~~IyA~GD~~~ 328 (478)
T 1v59_A 313 FNSKFPHIKVVGDVTF 328 (478)
T ss_dssp SBCSSTTEEECGGGSS
T ss_pred CccCCCCEEEeeccCC
Confidence 4578999999999876
No 99
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=24.36 E-value=41 Score=24.77 Aligned_cols=19 Identities=26% Similarity=0.270 Sum_probs=14.8
Q ss_pred CCCC-CCCCEEEecCccccC
Q 034479 53 DQKT-PVKNFFLAGSYTKQI 71 (93)
Q Consensus 53 ~~~T-~~~nLfLAGDwt~t~ 71 (93)
..+| ..+|+|.+||-+...
T Consensus 291 ~l~t~~~~~Ifa~GD~~~~~ 310 (437)
T 3sx6_A 291 HQRSKKYANIFAAGIAIAIP 310 (437)
T ss_dssp TSBBSSCTTEEECGGGBCCC
T ss_pred hccCCCCCCEEEEEEEeccC
Confidence 3445 799999999998753
No 100
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=24.33 E-value=28 Score=26.87 Aligned_cols=16 Identities=25% Similarity=0.476 Sum_probs=13.4
Q ss_pred CCCCCCCEEEecCccc
Q 034479 54 QKTPVKNFFLAGSYTK 69 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~ 69 (93)
.+|..+|+|.+||-..
T Consensus 421 ~~ts~~~VyA~GD~~~ 436 (598)
T 2x8g_A 421 EQTTVSNVYAIGDINA 436 (598)
T ss_dssp SBCSSTTEEECGGGBT
T ss_pred CcCCCCCEEEEeeecC
Confidence 3688999999999854
No 101
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=24.32 E-value=33 Score=25.15 Aligned_cols=17 Identities=18% Similarity=0.436 Sum_probs=14.6
Q ss_pred CCCCCCCEEEecCcccc
Q 034479 54 QKTPVKNFFLAGSYTKQ 70 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~t 70 (93)
.+|..+|+|.+||-+..
T Consensus 253 ~~t~~~~IyA~GD~a~~ 269 (385)
T 3klj_A 253 METSIKDIYACGDVAEF 269 (385)
T ss_dssp CBCSSTTEEECGGGEEE
T ss_pred cccCCCCEEEEEeeEec
Confidence 46889999999998864
No 102
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=24.19 E-value=67 Score=17.39 Aligned_cols=12 Identities=25% Similarity=0.529 Sum_probs=5.3
Q ss_pred HHHHHHHHHHHH
Q 034479 6 DEIIRRVAKQVL 17 (93)
Q Consensus 6 eel~~~v~~eL~ 17 (93)
+||++.+.+||.
T Consensus 14 qEIL~E~RkElq 25 (45)
T 1use_A 14 QELLEEVKKELQ 25 (45)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 344444444443
No 103
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=23.91 E-value=29 Score=25.81 Aligned_cols=16 Identities=19% Similarity=0.351 Sum_probs=13.6
Q ss_pred CCCCCCCEEEecCccc
Q 034479 54 QKTPVKNFFLAGSYTK 69 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~ 69 (93)
.+|..+|+|.+||-+.
T Consensus 308 ~~t~~~~IyA~GD~~~ 323 (474)
T 1zmd_A 308 FQTKIPNIYAIGDVVA 323 (474)
T ss_dssp CBCSSTTEEECGGGSS
T ss_pred CccCCCCEEEeeecCC
Confidence 4588999999999875
No 104
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=23.82 E-value=29 Score=26.20 Aligned_cols=17 Identities=29% Similarity=0.516 Sum_probs=14.2
Q ss_pred CCCCCCCCEEEecCccc
Q 034479 53 DQKTPVKNFFLAGSYTK 69 (93)
Q Consensus 53 ~~~T~~~nLfLAGDwt~ 69 (93)
..+|..+|+|.+||-+.
T Consensus 300 ~~~t~~~~IyA~GD~~~ 316 (492)
T 3ic9_A 300 TLQTSVDHIFVAGDANN 316 (492)
T ss_dssp TCBCSSTTEEECGGGGT
T ss_pred cccCCCCCEEEEEecCC
Confidence 45688999999999875
No 105
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=23.35 E-value=30 Score=25.79 Aligned_cols=16 Identities=19% Similarity=0.370 Sum_probs=13.5
Q ss_pred CCCCCCCEEEecCccc
Q 034479 54 QKTPVKNFFLAGSYTK 69 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~ 69 (93)
.+|..+|+|.+||-+.
T Consensus 297 ~~t~~~~Iya~GD~~~ 312 (464)
T 2eq6_A 297 METSVPGVYAIGDAAR 312 (464)
T ss_dssp CBCSSTTEEECGGGTC
T ss_pred cccCCCCEEEEeccCC
Confidence 4678899999999874
No 106
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=22.94 E-value=21 Score=27.68 Aligned_cols=18 Identities=22% Similarity=0.423 Sum_probs=14.3
Q ss_pred CCCCCEEEecCccccCcc
Q 034479 56 TPVKNFFLAGSYTKQIVW 73 (93)
Q Consensus 56 T~~~nLfLAGDwt~t~~p 73 (93)
|+|+|||-||+-+..-+.
T Consensus 525 ~~I~GLyAaGe~~~g~~g 542 (572)
T 1d4d_A 525 KPITGLYAAGEVTGGVHG 542 (572)
T ss_dssp SEEEEEEECSTTEESTTT
T ss_pred cccCCeeECeecccCCCC
Confidence 899999999987754443
No 107
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=22.84 E-value=31 Score=25.79 Aligned_cols=16 Identities=19% Similarity=0.349 Sum_probs=13.9
Q ss_pred CCCCCCCEEEecCccc
Q 034479 54 QKTPVKNFFLAGSYTK 69 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~ 69 (93)
.+|..+|+|.+||-+.
T Consensus 312 ~~t~~~~IyA~GD~~~ 327 (482)
T 1ojt_A 312 MRTNVPHIYAIGDIVG 327 (482)
T ss_dssp SBCSSTTEEECGGGTC
T ss_pred cccCCCCEEEEEcccC
Confidence 4688999999999876
No 108
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=22.55 E-value=32 Score=25.78 Aligned_cols=17 Identities=24% Similarity=0.473 Sum_probs=14.0
Q ss_pred CCCCCCCEEEecCcccc
Q 034479 54 QKTPVKNFFLAGSYTKQ 70 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~t 70 (93)
.+|..+|+|.+||-+..
T Consensus 306 ~~ts~p~IyA~GD~~~~ 322 (480)
T 3cgb_A 306 MQTNVQDVYAAGDCATH 322 (480)
T ss_dssp SBCSSTTEEECGGGBCE
T ss_pred ccCCCCCEEEeeeEEEe
Confidence 36778999999998854
No 109
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=22.26 E-value=36 Score=27.32 Aligned_cols=17 Identities=12% Similarity=0.210 Sum_probs=14.4
Q ss_pred CCCCCCCCEEEecCccc
Q 034479 53 DQKTPVKNFFLAGSYTK 69 (93)
Q Consensus 53 ~~~T~~~nLfLAGDwt~ 69 (93)
..+|.++|||-|||-..
T Consensus 447 ~~~t~v~gl~a~Ge~~~ 463 (662)
T 3gyx_A 447 NRMTTVEGLWTCADGVG 463 (662)
T ss_dssp TTBCSSBTEECCSSSBC
T ss_pred CCCCccCCeEeCccccc
Confidence 45799999999999764
No 110
>3o5y_A Sensor protein; GAF domain, histidine, kinase, PSI, MCSG, structural genomics, midwest center for structural genomics, protein S initiative; 2.45A {Bacillus halodurans}
Probab=22.20 E-value=78 Score=20.24 Aligned_cols=21 Identities=19% Similarity=0.287 Sum_probs=18.6
Q ss_pred CCCHHHHHHHHHHHHHHHCCC
Q 034479 2 PLPNDEIIRRVAKQVLALFPS 22 (93)
Q Consensus 2 ~~~deel~~~v~~eL~~~~P~ 22 (93)
+++-+++.+.+...|++++|-
T Consensus 3 ~~sldevL~~v~~~l~~~~~~ 23 (165)
T 3o5y_A 3 AMSLDDIINNMIDKLKLLVHF 23 (165)
T ss_dssp -CCHHHHHHHHHHHHHHHSCC
T ss_pred CCCHHHHHHHHHHHHHHhcCc
Confidence 578899999999999999984
No 111
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=22.08 E-value=20 Score=27.57 Aligned_cols=19 Identities=16% Similarity=0.160 Sum_probs=14.9
Q ss_pred CCCCCEEEecCccccCccc
Q 034479 56 TPVKNFFLAGSYTKQIVWK 74 (93)
Q Consensus 56 T~~~nLfLAGDwt~t~~pA 74 (93)
++|+|||-||+-+..-+.+
T Consensus 524 ~~I~GLyAaGe~~~g~~g~ 542 (571)
T 1y0p_A 524 QVIPGLYGAGEVTGGVHGA 542 (571)
T ss_dssp CEEEEEEECSTTEESSSTT
T ss_pred CCcCCcEeceEcCCCCcCC
Confidence 7999999999877654443
No 112
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=22.01 E-value=33 Score=25.59 Aligned_cols=16 Identities=31% Similarity=0.395 Sum_probs=13.5
Q ss_pred CCCCCCCEEEecCccc
Q 034479 54 QKTPVKNFFLAGSYTK 69 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~ 69 (93)
.+|..+|+|.+||-+.
T Consensus 290 ~~t~~~~Iya~GD~~~ 305 (463)
T 2r9z_A 290 QNTNVPGVYALGDITG 305 (463)
T ss_dssp SBCSSTTEEECGGGGT
T ss_pred CccCCCCEEEEeecCC
Confidence 3578899999999875
No 113
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=21.91 E-value=34 Score=25.75 Aligned_cols=16 Identities=25% Similarity=0.397 Sum_probs=13.7
Q ss_pred CCCCCCCEEEecCccc
Q 034479 54 QKTPVKNFFLAGSYTK 69 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~ 69 (93)
.+|..+|+|.+||-+.
T Consensus 305 ~~t~~~~IyA~GD~~~ 320 (499)
T 1xdi_A 305 SRTLATGIYAAGDCTG 320 (499)
T ss_dssp SBCSSTTEEECSGGGT
T ss_pred cccCCCCEEEEeccCC
Confidence 4578999999999875
No 114
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=21.81 E-value=42 Score=25.33 Aligned_cols=16 Identities=31% Similarity=0.542 Sum_probs=13.2
Q ss_pred CCCCCCCEEEecCccc
Q 034479 54 QKTPVKNFFLAGSYTK 69 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~ 69 (93)
.+|..+|+|.+||-+.
T Consensus 300 ~~t~~~~iya~GD~~~ 315 (500)
T 1onf_A 300 QRTSVNNIYAVGDCCM 315 (500)
T ss_dssp CBCSSSSEEECSTTEE
T ss_pred cccCCCCEEEEecccc
Confidence 3567899999999883
No 115
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=21.58 E-value=38 Score=25.42 Aligned_cols=17 Identities=18% Similarity=0.360 Sum_probs=14.1
Q ss_pred CCCCCCCEEEecCcccc
Q 034479 54 QKTPVKNFFLAGSYTKQ 70 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~t 70 (93)
.+|..+|+|.+||-+..
T Consensus 314 ~~t~~~~IyA~GD~~~~ 330 (490)
T 2bc0_A 314 QETSIPGVYAIGDCATI 330 (490)
T ss_dssp CBCSSTTEEECGGGBCE
T ss_pred cccCCCCEEEeeeeEEe
Confidence 46788999999998864
No 116
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=21.58 E-value=35 Score=25.50 Aligned_cols=14 Identities=14% Similarity=0.449 Sum_probs=10.7
Q ss_pred CCCCCEEEecCccc
Q 034479 56 TPVKNFFLAGSYTK 69 (93)
Q Consensus 56 T~~~nLfLAGDwt~ 69 (93)
..++|||+||+-++
T Consensus 380 k~~~gLy~aGE~lD 393 (417)
T 3v76_A 380 KEVPGLYFVGECVD 393 (417)
T ss_dssp TTSTTEEECGGGBS
T ss_pred cCCCCeEEEEEeEe
Confidence 36899999995543
No 117
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=21.38 E-value=35 Score=25.13 Aligned_cols=17 Identities=24% Similarity=0.270 Sum_probs=14.0
Q ss_pred CCCCCCCEEEecCcccc
Q 034479 54 QKTPVKNFFLAGSYTKQ 70 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~t 70 (93)
.+|..+|+|.+||-+..
T Consensus 269 ~~t~~~~Iya~GD~~~~ 285 (447)
T 1nhp_A 269 MRTSEPDVFAVGDATLI 285 (447)
T ss_dssp CBCSSTTEEECGGGSCE
T ss_pred ccCCCCCEEEeeeEEEe
Confidence 46788999999998863
No 118
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=21.01 E-value=43 Score=26.83 Aligned_cols=18 Identities=22% Similarity=0.283 Sum_probs=14.5
Q ss_pred CCCCCCCCCEEEecCccc
Q 034479 52 RDQKTPVKNFFLAGSYTK 69 (93)
Q Consensus 52 P~~~T~~~nLfLAGDwt~ 69 (93)
...+|+|+|||-||+-..
T Consensus 379 ~~~~v~IpGLYAaGE~a~ 396 (660)
T 2bs2_A 379 YRGEAKLKGLFSAGEAAC 396 (660)
T ss_dssp TTSBCSSBTEEECGGGEE
T ss_pred CCCceecCCEEecccccc
Confidence 456679999999999754
No 119
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=20.91 E-value=40 Score=26.35 Aligned_cols=16 Identities=19% Similarity=0.357 Sum_probs=14.0
Q ss_pred CCCCCCCEEEecCccc
Q 034479 54 QKTPVKNFFLAGSYTK 69 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~ 69 (93)
.+|.++|+|-+||-+.
T Consensus 346 ~~Ts~p~IyAiGDv~~ 361 (542)
T 4b1b_A 346 SCTNIPSIFAVGDVAE 361 (542)
T ss_dssp SBCSSTTEEECTTSBT
T ss_pred ccccCCCeEEeccccC
Confidence 4699999999999875
No 120
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=20.74 E-value=37 Score=25.71 Aligned_cols=16 Identities=31% Similarity=0.513 Sum_probs=13.8
Q ss_pred CCCCCCCEEEecCccc
Q 034479 54 QKTPVKNFFLAGSYTK 69 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~ 69 (93)
.+|..+|+|.+||-+.
T Consensus 318 ~~t~~~~IyA~GD~~~ 333 (495)
T 2wpf_A 318 SRTNVPNIYAIGDITD 333 (495)
T ss_dssp CBCSSTTEEECGGGGC
T ss_pred CccCCCCEEEEeccCC
Confidence 4688999999999885
No 121
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=20.40 E-value=38 Score=25.56 Aligned_cols=16 Identities=38% Similarity=0.538 Sum_probs=13.8
Q ss_pred CCCCCCCEEEecCccc
Q 034479 54 QKTPVKNFFLAGSYTK 69 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~ 69 (93)
.+|..+|+|.+||-+.
T Consensus 314 ~~t~~~~IyA~GD~~~ 329 (490)
T 1fec_A 314 SKTNVDNIYAIGDVTD 329 (490)
T ss_dssp CBCSSTTEEECGGGGC
T ss_pred CccCCCCEEEEeccCC
Confidence 4688999999999885
No 122
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=20.34 E-value=38 Score=25.19 Aligned_cols=16 Identities=19% Similarity=0.318 Sum_probs=13.4
Q ss_pred CCCCCCCEEEecCccc
Q 034479 54 QKTPVKNFFLAGSYTK 69 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~ 69 (93)
.+|..+|+|.+||-+.
T Consensus 293 ~~t~~~~Iya~GD~~~ 308 (458)
T 1lvl_A 293 CQTSMHNVWAIGDVAG 308 (458)
T ss_dssp CBCSSTTEEECGGGGC
T ss_pred CcCCCCCEEEeeccCC
Confidence 4578899999999875
No 123
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=20.27 E-value=40 Score=24.99 Aligned_cols=17 Identities=35% Similarity=0.495 Sum_probs=14.0
Q ss_pred CCCCCCCEEEecCcccc
Q 034479 54 QKTPVKNFFLAGSYTKQ 70 (93)
Q Consensus 54 ~~T~~~nLfLAGDwt~t 70 (93)
.+|..+|+|.+||-+..
T Consensus 297 ~~t~~~~iya~GD~~~~ 313 (467)
T 1zk7_A 297 MRTSNPNIYAAGDCTDQ 313 (467)
T ss_dssp CBCSSTTEEECSTTBSS
T ss_pred cccCCCCEEEEeccCCC
Confidence 45789999999998753
No 124
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus}
Probab=20.22 E-value=43 Score=23.30 Aligned_cols=20 Identities=10% Similarity=0.147 Sum_probs=13.6
Q ss_pred CCCEEEecCccc-----cCccccee
Q 034479 58 VKNFFLAGSYTK-----QIVWKEQL 77 (93)
Q Consensus 58 ~~nLfLAGDwt~-----t~~pAt~~ 77 (93)
+=||.+.|||.. +.+|++|+
T Consensus 228 ilnl~~gg~w~g~~~~~~~~p~~m~ 252 (264)
T 2vy0_A 228 ILNLAVGGYWPGNPDATTPFPAKMV 252 (264)
T ss_dssp EEEEEESCTTTCCCCTTCCSSEEEE
T ss_pred EEEEEEcCCCCCCCCCCCCCCCeEE
Confidence 348888898853 45677775
Done!