BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034485
MASRYRALSKSTHFLLKSTLTKPTLKPNPLPSLLSTRSSPTFSRSVHQLGCLQSLLPLHS
AVSSARLTSCLGIDSTSSRSLSQGMLCSANPGV

High Scoring Gene Products

Symbol, full name Information P value
NOXY2
AT5G11630
protein from Arabidopsis thaliana 3.4e-18
AT4G17310 protein from Arabidopsis thaliana 2.2e-11
AT5G47455 protein from Arabidopsis thaliana 2.0e-08
AT4G39300 protein from Arabidopsis thaliana 8.1e-05
AT1G55205 protein from Arabidopsis thaliana 0.00010
AT4G34265 protein from Arabidopsis thaliana 0.00093

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034485
        (93 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2181925 - symbol:NOXY2 "AT5G11630" species:370...   199  3.4e-18   2
TAIR|locus:2130819 - symbol:AT4G17310 species:3702 "Arabi...   156  2.2e-11   1
TAIR|locus:505006678 - symbol:AT5G47455 "AT5G47455" speci...   128  2.0e-08   1
TAIR|locus:2136363 - symbol:AT4G39300 "AT4G39300" species...    94  8.1e-05   1
TAIR|locus:4010713552 - symbol:AT1G55205 "AT1G55205" spec...    93  0.00010   1
TAIR|locus:505006558 - symbol:AT4G34265 "AT4G34265" speci...    84  0.00093   1


>TAIR|locus:2181925 [details] [associations]
            symbol:NOXY2 "AT5G11630" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0042742
            "defense response to bacterium" evidence=IMP] [GO:0005739
            "mitochondrion" evidence=IDA] [GO:0048364 "root development"
            evidence=IMP] [GO:0050832 "defense response to fungus"
            evidence=IMP] [GO:0071433 "cell wall repair" evidence=IMP]
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0042742 EMBL:AL163814
            HOGENOM:HOG000237694 IPI:IPI00543806 PIR:T48522 RefSeq:NP_196724.3
            UniGene:At.32230 UniGene:At.49008 STRING:Q9LYG7
            EnsemblPlants:AT5G11630.1 GeneID:831035 KEGG:ath:AT5G11630
            TAIR:At5g11630 InParanoid:Q9LYG7 OMA:LCSANPG PhylomeDB:Q9LYG7
            ProtClustDB:CLSN2699113 Genevestigator:Q9LYG7 Uniprot:Q9LYG7
        Length = 93

 Score = 199 (75.1 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
 Identities = 40/48 (83%), Positives = 45/48 (93%)

Query:    46 VHQLGCLQSLLPLHSAVSSARLTSCLGIDSTSSRSLSQGMLCSANPGV 93
             + QLG LQSLLPL+SAV+SARLTSCLGIDS +SRSL+QGMLCSANPGV
Sbjct:    46 IGQLGSLQSLLPLYSAVASARLTSCLGIDSQNSRSLAQGMLCSANPGV 93

 Score = 35 (17.4 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
 Identities = 8/10 (80%), Positives = 9/10 (90%)

Query:     1 MASRYRALSK 10
             MASR R+LSK
Sbjct:     1 MASRCRSLSK 10


>TAIR|locus:2130819 [details] [associations]
            symbol:AT4G17310 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM] EMBL:CP002687
            UniGene:At.26556 EMBL:AY050862 EMBL:BT010622 EMBL:AK175517
            IPI:IPI00546833 RefSeq:NP_193463.1 EnsemblPlants:AT4G17310.1
            GeneID:827444 KEGG:ath:AT4G17310 TAIR:At4g17310 InParanoid:Q949V8
            OMA:CRRFISK PhylomeDB:Q949V8 ProtClustDB:CLSN2680468
            Genevestigator:Q949V8 Uniprot:Q949V8
        Length = 99

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 30/44 (68%), Positives = 36/44 (81%)

Query:    48 QLGCLQSLLPLHSAVSSARLTSCLGIDSTSSRSLSQGMLCSANP 91
             +LGC+QSLLPLHS V++ARLTSCL   S SSR+LSQG LC  +P
Sbjct:    54 ELGCVQSLLPLHSTVAAARLTSCLSTTSRSSRALSQGTLCCTSP 97


>TAIR|locus:505006678 [details] [associations]
            symbol:AT5G47455 "AT5G47455" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM;IDA] [GO:0005886 "plasma membrane"
            evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
            GO:GO:0005739 EMBL:CP002688 UniGene:At.66689 IPI:IPI00533845
            RefSeq:NP_568683.2 EnsemblPlants:AT5G47455.4 GeneID:834795
            KEGG:ath:AT5G47455 OMA:RNSPIGT Uniprot:F4JX57
        Length = 116

 Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 25/36 (69%), Positives = 31/36 (86%)

Query:    48 QLGCLQSLLPLHSAVSSARLTSCLGIDSTSSRSLSQ 83
             +LGC+QSLLPLHS V++ARLTSCL   S SSR+L+Q
Sbjct:    63 ELGCVQSLLPLHSTVAAARLTSCLSTTSRSSRALTQ 98


>TAIR|locus:2136363 [details] [associations]
            symbol:AT4G39300 "AT4G39300" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002687 EMBL:AL161595
            EMBL:AL050351 HOGENOM:HOG000237694 EMBL:AY088247 EMBL:BT004680
            EMBL:AK117138 EMBL:AK176792 EMBL:AK176869 EMBL:AK176902
            IPI:IPI00528987 PIR:T08578 RefSeq:NP_568056.1 UniGene:At.31102
            STRING:Q9T036 EnsemblPlants:AT4G39300.1 GeneID:830086
            KEGG:ath:AT4G39300 TAIR:At4g39300 eggNOG:NOG241281
            InParanoid:Q9T036 OMA:FCRSALM PhylomeDB:Q9T036
            ProtClustDB:CLSN2689835 Genevestigator:Q9T036 Uniprot:Q9T036
        Length = 96

 Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
 Identities = 19/37 (51%), Positives = 28/37 (75%)

Query:    49 LGCLQSLLPLHSAVSSARLTSCLGIDSTSSRSLSQGM 85
             LG +++++PLHSAV+SARL S +  DS+    LSQG+
Sbjct:    56 LGSVETMIPLHSAVASARLRSSIAADSSCWSLLSQGL 92


>TAIR|locus:4010713552 [details] [associations]
            symbol:AT1G55205 "AT1G55205" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002684 EMBL:AC027034
            HOGENOM:HOG000237694 IPI:IPI00891930 RefSeq:NP_001117497.1
            UniGene:At.49462 UniGene:At.69368 EnsemblPlants:AT1G55205.2
            GeneID:5007805 KEGG:ath:AT1G55205 TAIR:At1g55205 OMA:SVESKSW
            PhylomeDB:B3H4H0 ProtClustDB:CLSN2699057 Genevestigator:B3H4H0
            Uniprot:B3H4H0
        Length = 103

 Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
 Identities = 20/42 (47%), Positives = 28/42 (66%)

Query:    48 QLGCLQSLLPLHSAVSSARLTSCLGIDSTSSRSLSQGMLCSA 89
             +L C  S+LPLHSA++SARL S L ++S S   + QG   S+
Sbjct:    56 ELSCCLSMLPLHSAIASARLISSLSVESKSWGLVPQGQSFSS 97


>TAIR|locus:505006558 [details] [associations]
            symbol:AT4G34265 "AT4G34265" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002687 HOGENOM:HOG000237694
            ProtClustDB:CLSN2688123 EMBL:AY086804 EMBL:BT004935 EMBL:AK118797
            EMBL:AK175209 EMBL:AK175277 EMBL:AK175290 EMBL:AK175532
            EMBL:AK175706 EMBL:AK175886 EMBL:AK176172 EMBL:AK176282
            EMBL:AK176497 EMBL:AK176537 EMBL:AK176565 EMBL:AK176658
            EMBL:AK176803 IPI:IPI00548379 RefSeq:NP_567963.3 UniGene:At.25513
            UniGene:At.75113 EnsemblPlants:AT4G34265.1 GeneID:829576
            KEGG:ath:AT4G34265 TAIR:At4g34265 InParanoid:Q8LC44 OMA:FTNPRNL
            PhylomeDB:Q8LC44 Genevestigator:Q8LC44 Uniprot:Q8LC44
        Length = 94

 Score = 84 (34.6 bits), Expect = 0.00093, P = 0.00093
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query:    48 QLGCLQSLLPLHSAVSSARLTSCLGIDSTSSRSLSQG 84
             +LGC +S LPL++ V++ARLTS L ++  +   LS G
Sbjct:    53 ELGCTESFLPLYNVVAAARLTSHLNVNLRAFCELSNG 89


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.125   0.361    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       93        62   0.00091  102 3  11 22  0.48    27
                                                     29  0.41    28


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  432 (46 KB)
  Total size of DFA:  74 KB (2062 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.01u 0.12s 7.13t   Elapsed:  00:00:01
  Total cpu time:  7.01u 0.12s 7.13t   Elapsed:  00:00:01
  Start:  Mon May 20 16:50:13 2013   End:  Mon May 20 16:50:14 2013

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