Your job contains 1 sequence.
>034489
MPLGLILGIGRAFRRKRTSSLDILSSKRAPRDYYKGKNCKSTGFHTRKGGYVVVQEKLPN
YVVPDLTDFKLKSYVSQCPREVKTAEAAEPGKQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 034489
(93 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2167072 - symbol:AT5G39800 "AT5G39800" species... 369 5.8e-34 1
TAIR|locus:2174910 - symbol:AT5G40080 "AT5G40080" species... 369 5.8e-34 1
UNIPROTKB|A5PJ71 - symbol:MRPL41 "Uncharacterized protein... 160 8.2e-12 1
UNIPROTKB|E2R2N8 - symbol:MRPL41 "Uncharacterized protein... 156 2.2e-11 1
UNIPROTKB|Q6DJI4 - symbol:mrpl41-a "39S ribosomal protein... 147 2.0e-10 1
UNIPROTKB|Q6INF3 - symbol:mrpl41-b "39S ribosomal protein... 145 3.2e-10 1
UNIPROTKB|E1BU45 - symbol:MRPL41 "Uncharacterized protein... 143 5.2e-10 1
RGD|1310241 - symbol:Mrpl41 "mitochondrial ribosomal prot... 142 6.6e-10 1
MGI|MGI:1333816 - symbol:Mrpl41 "mitochondrial ribosomal ... 139 1.4e-09 1
UNIPROTKB|Q8IXM3 - symbol:MRPL41 "39S ribosomal protein L... 130 1.2e-08 1
ZFIN|ZDB-GENE-050522-200 - symbol:mrpl41 "mitochondrial r... 124 5.3e-08 1
SGD|S000000486 - symbol:MRPL27 "Mitochondrial ribosomal p... 121 1.1e-07 1
ASPGD|ASPL0000056575 - symbol:AN0476 species:162425 "Emer... 107 3.4e-06 1
UNIPROTKB|Q291A0 - symbol:mRpL41 "39S ribosomal protein L... 97 4.0e-05 1
FB|FBgn0034001 - symbol:mRpL41 "mitochondrial ribosomal p... 91 0.00021 1
WB|WBGene00015185 - symbol:mrpl-41 species:6239 "Caenorha... 89 0.00048 1
UNIPROTKB|P90993 - symbol:mrpl-41 "39S ribosomal protein ... 89 0.00048 1
CGD|CAL0001458 - symbol:MRPL27 species:5476 "Candida albi... 87 0.00067 1
UNIPROTKB|Q5AHY8 - symbol:MRPL27 "Likely mitochondrial ri... 87 0.00067 1
>TAIR|locus:2167072 [details] [associations]
symbol:AT5G39800 "AT5G39800" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 GO:GO:0005840 InterPro:IPR019189
Pfam:PF09809 HOGENOM:HOG000231555 EMBL:BT005452 EMBL:AK118065
IPI:IPI00529327 RefSeq:NP_568574.1 UniGene:At.30326
UniGene:At.49113 STRING:Q8GXS6 PRIDE:Q8GXS6
EnsemblPlants:AT5G39800.1 GeneID:833976 KEGG:ath:AT5G39800
InParanoid:Q8GXS6 OMA:KGRNCKS ProtClustDB:CLSN2916896
ArrayExpress:Q8GXS6 Genevestigator:Q8GXS6 Uniprot:Q8GXS6
Length = 94
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 69/89 (77%), Positives = 77/89 (86%)
Query: 4 GLILGIGRAFRRKRTSSLDILSSKRAPRDYYKGKNCKSTGFHTRKGGYVVVQEKLPNYVV 63
GL++GIGR+FRRKR+SSLDILS KRAPRD+YKGKNCK TGFHTRKGGYVV +KLPNYVV
Sbjct: 6 GLLMGIGRSFRRKRSSSLDILSPKRAPRDFYKGKNCKPTGFHTRKGGYVVQPDKLPNYVV 65
Query: 64 PDLTDFKLKSYVSQCPREVKTAEAAEPGK 92
PDLT FKLK YVSQCP +V T E+ E K
Sbjct: 66 PDLTGFKLKPYVSQCPIQVNTNESTEASK 94
>TAIR|locus:2174910 [details] [associations]
symbol:AT5G40080 "AT5G40080" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005840
EMBL:AB022222 InterPro:IPR019189 Pfam:PF09809 HOGENOM:HOG000231555
UniGene:At.55271 UniGene:At.49113 ProtClustDB:CLSN2916896
EMBL:BT024645 IPI:IPI00531566 RefSeq:NP_198824.1 STRING:Q9LUJ9
EnsemblPlants:AT5G40080.1 GeneID:834005 KEGG:ath:AT5G40080
TAIR:At5g40080 InParanoid:Q9LUJ9 OMA:KRAPRTY PhylomeDB:Q9LUJ9
Genevestigator:Q9LUJ9 Uniprot:Q9LUJ9
Length = 94
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 69/89 (77%), Positives = 76/89 (85%)
Query: 4 GLILGIGRAFRRKRTSSLDILSSKRAPRDYYKGKNCKSTGFHTRKGGYVVVQEKLPNYVV 63
GL++GIGR+FRRKR SSLDILS KRAPRD+YKGKNCK TGFHTRKGGYVV +KLPNYVV
Sbjct: 6 GLLMGIGRSFRRKRASSLDILSPKRAPRDFYKGKNCKPTGFHTRKGGYVVQPDKLPNYVV 65
Query: 64 PDLTDFKLKSYVSQCPREVKTAEAAEPGK 92
PDLT FKLK YVSQCP +V T E+ E K
Sbjct: 66 PDLTGFKLKPYVSQCPLQVNTNESTEASK 94
>UNIPROTKB|A5PJ71 [details] [associations]
symbol:MRPL41 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] GO:GO:0006412
GO:GO:0005762 GO:GO:0003735 InterPro:IPR019189 Pfam:PF09809
HOVERGEN:HBG080323 CTD:64975 eggNOG:NOG264900 HOGENOM:HOG000231555
OrthoDB:EOG4C2HBW GeneTree:ENSGT00390000013158 EMBL:DAAA02032391
EMBL:BC141989 IPI:IPI00697549 RefSeq:NP_001092835.1 UniGene:Bt.9242
STRING:A5PJ71 Ensembl:ENSBTAT00000056731 GeneID:506521
KEGG:bta:506521 InParanoid:A5PJ71 OMA:LFMETAG NextBio:20867638
Uniprot:A5PJ71
Length = 135
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 33/74 (44%), Positives = 45/74 (60%)
Query: 3 LGLILGIGRAFRRKRTSSLDILSSKRAPRDYYKGKNCKSTGFHTRKGGYVVVQEKLPNYV 62
+GL+ G RA R + +SKR PR ++K + K GFH R G +V+V+E +P V
Sbjct: 1 MGLLSGAARALVRG-ADRMSKWTSKRGPRTFHKSRGAKGVGFHGRGGKFVLVKEMVPELV 59
Query: 63 VPDLTDFKLKSYVS 76
VPDL FKLK YV+
Sbjct: 60 VPDLAGFKLKPYVN 73
>UNIPROTKB|E2R2N8 [details] [associations]
symbol:MRPL41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005762 "mitochondrial large ribosomal subunit" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
GO:GO:0006412 GO:GO:0005762 GO:GO:0003735 InterPro:IPR019189
Pfam:PF09809 CTD:64975 GeneTree:ENSGT00390000013158 OMA:GPRTFYK
EMBL:AAEX03006723 RefSeq:XP_548346.2 UniGene:Cfa.42268
Ensembl:ENSCAFT00000030846 GeneID:491225 KEGG:cfa:491225
NextBio:20864104 Uniprot:E2R2N8
Length = 135
Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 32/74 (43%), Positives = 45/74 (60%)
Query: 3 LGLILGIGRAFRRKRTSSLDILSSKRAPRDYYKGKNCKSTGFHTRKGGYVVVQEKLPNYV 62
+GL+ R R + +SKR PR +YKG+ K TG H R G +V+V+E +P V
Sbjct: 1 MGLLSEAARCLVRG-ADRMSRWTSKRGPRTFYKGRGAKGTGVHGRDGKFVLVKEMVPELV 59
Query: 63 VPDLTDFKLKSYVS 76
VP+LT F+LK YV+
Sbjct: 60 VPELTGFRLKPYVN 73
>UNIPROTKB|Q6DJI4 [details] [associations]
symbol:mrpl41-a "39S ribosomal protein L41-A,
mitochondrial" species:8355 "Xenopus laevis" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISS] [GO:0006412
"translation" evidence=ISS] [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] GO:GO:0006915 GO:GO:0006412 GO:GO:0007049
GO:GO:0005762 GO:GO:0003735 InterPro:IPR019189 Pfam:PF09809
EMBL:BC075195 RefSeq:NP_001086478.1 UniGene:Xl.6809 GeneID:446312
KEGG:xla:446312 CTD:446312 Xenbase:XB-GENE-6256437
HOVERGEN:HBG080323 Uniprot:Q6DJI4
Length = 135
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 33/74 (44%), Positives = 43/74 (58%)
Query: 3 LGLILGIGRAFRRKRTSSLDILSSKRAPRDYYKGKNCKSTGFHTRKGGYVVVQEKLPNYV 62
+GLI I R R + +SK+ P Y KG+ K G+ T G +V V+E +P +V
Sbjct: 1 MGLISKIARGLVRGADRMAEC-TSKQGPNSYNKGRGAKKIGYLTASGKFVKVREMVPVFV 59
Query: 63 VPDLTDFKLKSYVS 76
VPDLT FKLK YVS
Sbjct: 60 VPDLTGFKLKPYVS 73
>UNIPROTKB|Q6INF3 [details] [associations]
symbol:mrpl41-b "39S ribosomal protein L41-B,
mitochondrial" species:8355 "Xenopus laevis" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISS] [GO:0006412
"translation" evidence=ISS] [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] GO:GO:0006915 GO:GO:0006412 GO:GO:0007049
GO:GO:0005762 GO:GO:0003735 InterPro:IPR019189 Pfam:PF09809
HOVERGEN:HBG080323 EMBL:BC072329 RefSeq:NP_001085417.1
UniGene:Xl.71511 GeneID:443843 KEGG:xla:443843 CTD:443843
Xenbase:XB-GENE-5760611 Uniprot:Q6INF3
Length = 135
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 33/74 (44%), Positives = 42/74 (56%)
Query: 3 LGLILGIGRAFRRKRTSSLDILSSKRAPRDYYKGKNCKSTGFHTRKGGYVVVQEKLPNYV 62
+GLI I R R + +SK P Y KG+ K G+ T G +V V+E +P +V
Sbjct: 1 MGLITKIARGLVRGADRMAEC-TSKLGPNSYNKGRGAKKIGYLTSSGKFVKVREMVPVFV 59
Query: 63 VPDLTDFKLKSYVS 76
VPDLT FKLK YVS
Sbjct: 60 VPDLTGFKLKPYVS 73
>UNIPROTKB|E1BU45 [details] [associations]
symbol:MRPL41 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] GO:GO:0006412
GO:GO:0005762 GO:GO:0003735 InterPro:IPR019189 Pfam:PF09809
CTD:64975 GeneTree:ENSGT00390000013158 OMA:GPRTFYK
EMBL:AADN02026927 IPI:IPI00597925 RefSeq:XP_415536.1
UniGene:Gga.1858 Ensembl:ENSGALT00000014235 GeneID:417261
KEGG:gga:417261 NextBio:20820591 Uniprot:E1BU45
Length = 135
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 32/88 (36%), Positives = 47/88 (53%)
Query: 3 LGLILGIGRAFRRKRTSSLDILSSKRAPRDYYKGKNCKSTGFHTRKGGYVVVQEKLPNYV 62
+GL+ + R R + +SKR PR Y KG+ K G T +++++E +P +V
Sbjct: 1 MGLLTELARGLVRG-ADRMSPFTSKRGPRSYNKGRGAKKMGVLTSSKKFILIKEMVPQFV 59
Query: 63 VPDLTDFKLKSYVSQCPREVKTAEAAEP 90
VPDL FKLK YVS + E +EP
Sbjct: 60 VPDLAGFKLKPYVSY-----RAPEGSEP 82
>RGD|1310241 [details] [associations]
symbol:Mrpl41 "mitochondrial ribosomal protein L41"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=ISO;ISS] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005762 "mitochondrial large
ribosomal subunit" evidence=ISO;ISS] [GO:0006412 "translation"
evidence=ISO;ISS] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=ISO;ISS] RGD:1310241
GO:GO:0006915 GO:GO:0006412 GO:GO:0007049 GO:GO:0005762
GO:GO:0003735 InterPro:IPR019189 Pfam:PF09809 HOVERGEN:HBG080323
CTD:64975 eggNOG:NOG264900 HOGENOM:HOG000231555 OrthoDB:EOG4C2HBW
GeneTree:ENSGT00390000013158 OMA:GPRTFYK EMBL:BC091293
IPI:IPI00198811 RefSeq:NP_001013444.1 UniGene:Rn.92811
IntAct:Q5BJX1 STRING:Q5BJX1 PRIDE:Q5BJX1 Ensembl:ENSRNOT00000044802
GeneID:296551 KEGG:rno:296551 UCSC:RGD:1310241 InParanoid:Q5BJX1
NextBio:641368 Genevestigator:Q5BJX1 Uniprot:Q5BJX1
Length = 134
Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 29/66 (43%), Positives = 43/66 (65%)
Query: 25 SSKRAPRDYYKGKNCKSTGFHTRKGGYVVVQEKLPNYVVPDLTDFKLKSYVS-QCPREVK 83
+SKR PR + K + K TGF+T + +V ++E +P +VVPDLT FKLK YV+ + P +
Sbjct: 22 TSKRGPRTFTKSRGAKKTGFYTNRK-FVQIKEMVPEFVVPDLTGFKLKPYVNYRAPAGID 80
Query: 84 TAEAAE 89
T A+
Sbjct: 81 TPLTAK 86
>MGI|MGI:1333816 [details] [associations]
symbol:Mrpl41 "mitochondrial ribosomal protein L41"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005762 "mitochondrial large ribosomal subunit" evidence=ISO]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=ISO] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=ISO] MGI:MGI:1333816
GO:GO:0006915 GO:GO:0006412 GO:GO:0007049 GO:GO:0005762
GO:GO:0003735 InterPro:IPR019189 Pfam:PF09809 HOVERGEN:HBG080323
CTD:64975 eggNOG:NOG264900 HOGENOM:HOG000231555 OrthoDB:EOG4C2HBW
GeneTree:ENSGT00390000013158 OMA:GPRTFYK EMBL:AK003340
EMBL:AK011837 EMBL:AK032370 EMBL:BC034728 IPI:IPI00378520
RefSeq:NP_001026978.2 UniGene:Mm.23010 STRING:Q9CQN7 PaxDb:Q9CQN7
PRIDE:Q9CQN7 DNASU:107733 Ensembl:ENSMUST00000045604 GeneID:107733
KEGG:mmu:107733 InParanoid:Q9CQN7 NextBio:359340 Bgee:Q9CQN7
CleanEx:MM_MRPL41 Genevestigator:Q9CQN7 Uniprot:Q9CQN7
Length = 135
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 25 SSKRAPRDYYKGKNCKSTGFHTRKGGYVVVQEKLPNYVVPDLTDFKLKSYVS-QCPREVK 83
+SKR PR + K + K TG +T +V ++E +P +VVPDLT FKLK YV+ + P +
Sbjct: 22 TSKRGPRTFTKSRGAKKTGIYTSDRKFVQIKEMVPEFVVPDLTGFKLKPYVNYRAPAGID 81
Query: 84 TAEAAE 89
T A+
Sbjct: 82 TPLTAK 87
>UNIPROTKB|Q8IXM3 [details] [associations]
symbol:MRPL41 "39S ribosomal protein L41, mitochondrial"
species:9606 "Homo sapiens" [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IDA] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=IDA] [GO:0006412
"translation" evidence=IDA] [GO:0030529 "ribonucleoprotein complex"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
GO:GO:0006915 GO:GO:0006412 GO:GO:0007049 GO:GO:0005762
GO:GO:0003735 EMBL:AL365502 CleanEx:HS_MRPL27 InterPro:IPR019189
Pfam:PF09809 HOVERGEN:HBG080323 CTD:64975 eggNOG:NOG264900
HOGENOM:HOG000231555 OrthoDB:EOG4C2HBW EMBL:AY232291 EMBL:BC040035
EMBL:AB051625 IPI:IPI00217553 RefSeq:NP_115866.1 UniGene:Hs.44017
ProteinModelPortal:Q8IXM3 IntAct:Q8IXM3 MINT:MINT-6492237
STRING:Q8IXM3 DMDM:74750734 PaxDb:Q8IXM3 PeptideAtlas:Q8IXM3
PRIDE:Q8IXM3 DNASU:64975 Ensembl:ENST00000371443 GeneID:64975
KEGG:hsa:64975 UCSC:uc004cnh.4 GeneCards:GC09P140445
HGNC:HGNC:14492 HPA:HPA024550 HPA:HPA027160 MIM:611846
neXtProt:NX_Q8IXM3 PharmGKB:PA30973 InParanoid:Q8IXM3 OMA:GPRTFYK
PhylomeDB:Q8IXM3 GenomeRNAi:64975 NextBio:67156 Bgee:Q8IXM3
CleanEx:HS_MRPL41 Genevestigator:Q8IXM3 Uniprot:Q8IXM3
Length = 137
Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 32/85 (37%), Positives = 45/85 (52%)
Query: 3 LGLILGIGRAFRRKRTSSLDILSSKRAPRDYY--KGKNCKSTGFHTRKGGYVVVQEKLPN 60
+G++ R R + +SKR PR + KG+ K GF T +V ++E +P
Sbjct: 1 MGVLAAAARCLVRG-ADRMSKWTSKRGPRSFRGRKGRGAKGIGFLTSGWRFVQIKEMVPE 59
Query: 61 YVVPDLTDFKLKSYVSQ-CPREVKT 84
+VVPDLT FKLK YVS P +T
Sbjct: 60 FVVPDLTGFKLKPYVSYLAPESEET 84
>ZFIN|ZDB-GENE-050522-200 [details] [associations]
symbol:mrpl41 "mitochondrial ribosomal protein L41"
species:7955 "Danio rerio" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0005762 "mitochondrial large ribosomal
subunit" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0005840 "ribosome" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] ZFIN:ZDB-GENE-050522-200 GO:GO:0006915
GO:GO:0006412 GO:GO:0007049 GO:GO:0005762 GO:GO:0003735
InterPro:IPR019189 Pfam:PF09809 HOVERGEN:HBG080323 EMBL:BC095781
IPI:IPI00504813 RefSeq:NP_001018603.1 UniGene:Dr.84766
STRING:Q502B0 GeneID:553805 KEGG:dre:553805 CTD:64975
eggNOG:NOG264900 HOGENOM:HOG000231555 InParanoid:Q502B0
OrthoDB:EOG4C2HBW NextBio:20880523 ArrayExpress:Q502B0
Uniprot:Q502B0
Length = 135
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 3 LGLILGIGRAFRRKRTSSLDILSSKRAPRDYYKGKNCKSTGFHTRKGGYVVVQEKLPNYV 62
+G++ + R F R + +SKR PR +YK + + TG T ++ ++ +P +
Sbjct: 1 MGVLSALARGFVRGADRMAE-WTSKRGPRTFYKSRGARPTGIVTSSRKFIPIRAMIPEFA 59
Query: 63 VPDLTDFKLKSYVSQCPREVKTAEAAEPGK 92
VP+L F LK+YVS T E P K
Sbjct: 60 VPNLEGFNLKAYVSY-KTPAGTEEPMTPEK 88
>SGD|S000000486 [details] [associations]
symbol:MRPL27 "Mitochondrial ribosomal protein of the large
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0003735 "structural constituent of ribosome" evidence=IPI]
[GO:0032543 "mitochondrial translation" evidence=IC] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=IPI]
SGD:S000000486 EMBL:BK006936 GO:GO:0005762 GO:GO:0003735
GO:GO:0032543 EMBL:X76053 eggNOG:NOG282990 OrthoDB:EOG4C5GV1
InterPro:IPR019189 Pfam:PF09809 EMBL:S77888 EMBL:Z36151 PIR:S27285
RefSeq:NP_009841.1 ProteinModelPortal:P36526 DIP:DIP-4961N
IntAct:P36526 MINT:MINT-511392 STRING:P36526 PaxDb:P36526
PeptideAtlas:P36526 EnsemblFungi:YBR282W GeneID:852585
KEGG:sce:YBR282W CYGD:YBR282w HOGENOM:HOG000247918 OMA:GNKHYYK
NextBio:971736 Genevestigator:P36526 GermOnline:YBR282W
Uniprot:P36526
Length = 146
Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 24 LSSKRAPRDYYKGKNCKSTGFHTRKGGYVVVQEKLPNYVVPDLTDFKLKSYVS 76
L++K+ + YKG G HT+ GGYV+ +K+ YV PD+ +F+LK YV+
Sbjct: 43 LTTKQGNKTMYKGTRASGIGRHTKFGGYVINWKKVRTYVTPDMVNFELKPYVN 95
>ASPGD|ASPL0000056575 [details] [associations]
symbol:AN0476 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] EMBL:BN001308 EMBL:AACD01000007 GO:GO:0005840
eggNOG:NOG282990 InterPro:IPR019189 Pfam:PF09809 RefSeq:XP_658080.1
STRING:Q5BG54 EnsemblFungi:CADANIAT00002217 GeneID:2876253
KEGG:ani:AN0476.2 HOGENOM:HOG000211444 OMA:PMMARLR
OrthoDB:EOG4W9NDS Uniprot:Q5BG54
Length = 137
Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 26/73 (35%), Positives = 39/73 (53%)
Query: 24 LSSKRAPRDYYKGKNCKSTGFHTRKGGYVVVQEKLPNYVVPD-LTDFKLKSYVSQCPREV 82
L++K+ YYKG S G+ + G YV+ +K+ YVVP+ L +FKL +V++
Sbjct: 13 LTTKQVNGGYYKGNRTGSMGYFAKNGSYVIDWKKVRTYVVPENLNEFKLTPFVTKVMAPT 72
Query: 83 K---TAEAAEPGK 92
K T E GK
Sbjct: 73 KSRYTHEIERNGK 85
>UNIPROTKB|Q291A0 [details] [associations]
symbol:mRpL41 "39S ribosomal protein L41, mitochondrial"
species:46245 "Drosophila pseudoobscura pseudoobscura" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISS] [GO:0006412
"translation" evidence=ISS] [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] GO:GO:0006412 GO:GO:0005762 GO:GO:0003735
EMBL:CM000071 GenomeReviews:CM000071_GR InterPro:IPR019189
Pfam:PF09809 eggNOG:NOG264900 OMA:IPDIIVP OrthoDB:EOG4BZKJZ
RefSeq:XP_001360637.1 GeneID:4804006 KEGG:dpo:Dpse_GA11937
FlyBase:FBgn0071986 InParanoid:Q291A0 Uniprot:Q291A0
Length = 166
Score = 97 (39.2 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 37 KNCKSTGFHTRKGGYVVVQEKLPNYVVPDLTDFKLKSYVSQCPREVKTAE 86
+ + TG G +V + EK+P+ +VPDLTD KLK YVS EV +E
Sbjct: 62 RGVRDTGILV-DGKFVEIPEKIPDIIVPDLTDCKLKPYVSYKAPEVVQSE 110
>FB|FBgn0034001 [details] [associations]
symbol:mRpL41 "mitochondrial ribosomal protein L41"
species:7227 "Drosophila melanogaster" [GO:0006412 "translation"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
EMBL:AE013599 GO:GO:0006412 GO:GO:0005762 GO:GO:0003735
InterPro:IPR019189 Pfam:PF09809 CTD:64975 eggNOG:NOG264900
EMBL:AY071157 RefSeq:NP_611022.2 UniGene:Dm.6088 IntAct:Q7JZM8
STRING:Q7JZM8 PaxDb:Q7JZM8 PRIDE:Q7JZM8 EnsemblMetazoa:FBtr0087400
GeneID:36688 KEGG:dme:Dmel_CG12954 FlyBase:FBgn0034001
GeneTree:ENSGT00390000013158 InParanoid:Q7JZM8 OMA:IPDIIVP
OrthoDB:EOG4BZKJZ PhylomeDB:Q7JZM8 GenomeRNAi:36688 NextBio:799875
Bgee:Q7JZM8 Uniprot:Q7JZM8
Length = 166
Score = 91 (37.1 bits), Expect = 0.00021, P = 0.00021
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 37 KNCKSTGFHTRKGGYVVVQEKLPNYVVPDLTDFKLKSYVSQCPREVKTAE 86
+ + TG G YV + EK+P+ +VPDLT KLK YVS +V +E
Sbjct: 62 RGVRDTGILV-DGQYVEIPEKIPDIIVPDLTGCKLKPYVSYKAPDVVQSE 110
>WB|WBGene00015185 [details] [associations]
symbol:mrpl-41 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0006412 GO:GO:0000003
GO:GO:0005762 GO:GO:0003735 InterPro:IPR019189 Pfam:PF09809
EMBL:FO080203 PIR:T25460 RefSeq:NP_493695.1
ProteinModelPortal:P90993 PaxDb:P90993 EnsemblMetazoa:B0432.3.1
EnsemblMetazoa:B0432.3.2 GeneID:173415 KEGG:cel:CELE_B0432.3
UCSC:B0432.3 CTD:173415 WormBase:B0432.3 eggNOG:NOG278653
HOGENOM:HOG000018210 InParanoid:P90993 OMA:FPELSPK NextBio:879553
Uniprot:P90993
Length = 180
Score = 89 (36.4 bits), Expect = 0.00048, P = 0.00048
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 27 KRAPRDYYKGKNCKSTGFHTRKGG-YVVVQEKLPNYVVPDLTDFKLKSYVS 76
K P++ ++ ++ GFH K G +V V+E VVP+L FKL+ YVS
Sbjct: 62 KLNPKELHRYTGVQADGFHDEKTGEFVPVKEMRSELVVPNLDGFKLRPYVS 112
>UNIPROTKB|P90993 [details] [associations]
symbol:mrpl-41 "39S ribosomal protein L41, mitochondrial"
species:6239 "Caenorhabditis elegans" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0030529
"ribonucleoprotein complex" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=ISS] GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0006412 GO:GO:0000003 GO:GO:0005762
GO:GO:0003735 InterPro:IPR019189 Pfam:PF09809 EMBL:FO080203
PIR:T25460 RefSeq:NP_493695.1 ProteinModelPortal:P90993
PaxDb:P90993 EnsemblMetazoa:B0432.3.1 EnsemblMetazoa:B0432.3.2
GeneID:173415 KEGG:cel:CELE_B0432.3 UCSC:B0432.3 CTD:173415
WormBase:B0432.3 eggNOG:NOG278653 HOGENOM:HOG000018210
InParanoid:P90993 OMA:FPELSPK NextBio:879553 Uniprot:P90993
Length = 180
Score = 89 (36.4 bits), Expect = 0.00048, P = 0.00048
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 27 KRAPRDYYKGKNCKSTGFHTRKGG-YVVVQEKLPNYVVPDLTDFKLKSYVS 76
K P++ ++ ++ GFH K G +V V+E VVP+L FKL+ YVS
Sbjct: 62 KLNPKELHRYTGVQADGFHDEKTGEFVPVKEMRSELVVPNLDGFKLRPYVS 112
>CGD|CAL0001458 [details] [associations]
symbol:MRPL27 species:5476 "Candida albicans" [GO:0005762
"mitochondrial large ribosomal subunit" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] CGD:CAL0001458
EMBL:AACQ01000017 EMBL:AACQ01000015 eggNOG:NOG282990
InterPro:IPR019189 Pfam:PF09809 HOGENOM:HOG000247918
RefSeq:XP_721291.1 RefSeq:XP_721562.1 STRING:Q5AHY8 GeneID:3636884
GeneID:3637106 KEGG:cal:CaO19.10582 KEGG:cal:CaO19.3064
Uniprot:Q5AHY8
Length = 168
Score = 87 (35.7 bits), Expect = 0.00067, P = 0.00067
Identities = 24/69 (34%), Positives = 35/69 (50%)
Query: 16 KRTSSLDILSSKRAPRDYYKGKNCKSTGFHTRKGGYVVVQEKLPNYVVPD-LTDFKLKSY 74
K S L+ K+ + YYKG G +G Y + EK+ YVVP+ L + +LK+
Sbjct: 35 KSGSKRHALTGKQGNKHYYKGTRSTGIGSWDSRGRYHINWEKVRTYVVPEGLNNTELKAL 94
Query: 75 VSQCPREVK 83
VS P+ K
Sbjct: 95 VS--PKSPK 101
>UNIPROTKB|Q5AHY8 [details] [associations]
symbol:MRPL27 "Likely mitochondrial ribosomal protein
MRPL27p" species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] CGD:CAL0001458 EMBL:AACQ01000017
EMBL:AACQ01000015 eggNOG:NOG282990 InterPro:IPR019189 Pfam:PF09809
HOGENOM:HOG000247918 RefSeq:XP_721291.1 RefSeq:XP_721562.1
STRING:Q5AHY8 GeneID:3636884 GeneID:3637106 KEGG:cal:CaO19.10582
KEGG:cal:CaO19.3064 Uniprot:Q5AHY8
Length = 168
Score = 87 (35.7 bits), Expect = 0.00067, P = 0.00067
Identities = 24/69 (34%), Positives = 35/69 (50%)
Query: 16 KRTSSLDILSSKRAPRDYYKGKNCKSTGFHTRKGGYVVVQEKLPNYVVPD-LTDFKLKSY 74
K S L+ K+ + YYKG G +G Y + EK+ YVVP+ L + +LK+
Sbjct: 35 KSGSKRHALTGKQGNKHYYKGTRSTGIGSWDSRGRYHINWEKVRTYVVPEGLNNTELKAL 94
Query: 75 VSQCPREVK 83
VS P+ K
Sbjct: 95 VS--PKSPK 101
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.136 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 93 93 0.00091 102 3 11 22 0.38 30
29 0.41 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 501 (53 KB)
Total size of DFA: 98 KB (2070 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 9.54u 0.12s 9.66t Elapsed: 00:00:01
Total cpu time: 9.55u 0.12s 9.67t Elapsed: 00:00:01
Start: Thu May 9 17:05:06 2013 End: Thu May 9 17:05:07 2013