Query 034491
Match_columns 93
No_of_seqs 100 out of 538
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 05:00:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034491.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034491hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n10_A PHL P I, pollen allerge 99.9 7E-23 2.4E-27 154.5 5.6 66 26-91 13-81 (241)
2 2hcz_X Beta-expansin 1A; domai 99.9 2.1E-22 7.2E-27 152.0 6.3 66 26-91 13-81 (245)
3 1wc2_A Endoglucanase; hydrolas 99.7 5.1E-19 1.7E-23 129.6 3.5 56 30-90 12-79 (181)
4 3d30_A YOAJ, expansin like pro 99.4 4.5E-13 1.5E-17 98.5 5.5 53 31-90 5-62 (208)
5 1bw3_A Barwin, basic barley SE 90.3 0.16 5.4E-06 34.8 2.4 40 49-90 27-73 (125)
6 3m3g_A EPL1 protein; fungal, p 83.3 1.2 4E-05 30.3 3.6 23 65-88 44-68 (120)
7 2kqa_A Cerato-platanin; elicit 82.1 1.8 6.2E-05 29.8 4.2 23 65-88 50-74 (129)
8 3sul_A Cerato-platanin-like pr 80.2 1.5 5E-05 29.9 3.2 22 67-89 46-69 (122)
9 3suk_A Cerato-platanin-like pr 76.0 2.6 8.7E-05 28.8 3.4 23 65-88 45-69 (125)
10 3suj_A Cerato-platanin 1; doub 75.5 2.7 9.4E-05 28.7 3.5 25 65-90 44-70 (127)
11 3nrl_A Uncharacterized protein 61.7 4.8 0.00016 25.7 2.2 19 72-90 25-43 (81)
12 3sum_A Cerato-platanin-like pr 57.3 8 0.00027 26.8 2.8 21 66-89 49-69 (136)
13 4avr_A PA4485; unknown functio 38.5 27 0.00092 22.5 3.0 45 33-88 2-46 (95)
14 3bx4_B Aggretin beta chain; to 36.5 11 0.00038 23.7 0.9 9 26-34 23-31 (146)
No 1
>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3
Probab=99.87 E-value=7e-23 Score=154.48 Aligned_cols=66 Identities=21% Similarity=0.627 Sum_probs=54.6
Q ss_pred ccCCCCceeeeEEEcCCCCCCCC--CCCcCCCCCCCCCCCCcceeeec-ccCCCCCCCcceEEEEeCCC
Q 034491 26 ETCPDCFIRSRAAHYPNSDEQGT--DSGACGFGSFGATINGGDVSAAS-GLYRNGLGCGACYQVHISNQ 91 (93)
Q Consensus 26 ~~~~~~w~~g~AT~Yg~~~~~g~--~gGaCGyg~~~~~~~g~~vAA~S-~lf~~G~~CGaCyeVrC~~~ 91 (93)
..++.+|++++||||+++++.|+ ++|||||++++..+++.++||+| +||+||++||+||||||.++
T Consensus 13 ~~~~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~~~g~~~aAls~~lf~~G~~CG~CyeV~c~~~ 81 (241)
T 1n10_A 13 ATYGDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTKP 81 (241)
T ss_dssp CBCCCSCEEEEEEEEC----------CCTTCCCCTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECSS
T ss_pred CcccCCceeeEEEEeCCCCCCCcCCCCeeCCCCCcCcCCCCcEEEEeCHHHccCcccCCCeEEEEeCCC
Confidence 45789999999999999998888 89999999988889999999999 99999999999999999864
No 2
>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays}
Probab=99.86 E-value=2.1e-22 Score=152.04 Aligned_cols=66 Identities=24% Similarity=0.642 Sum_probs=61.5
Q ss_pred ccCCCCceeeeEEEcCCCCCCCC--CCCcCCCCCCCCCCCCcceeeec-ccCCCCCCCcceEEEEeCCC
Q 034491 26 ETCPDCFIRSRAAHYPNSDEQGT--DSGACGFGSFGATINGGDVSAAS-GLYRNGLGCGACYQVHISNQ 91 (93)
Q Consensus 26 ~~~~~~w~~g~AT~Yg~~~~~g~--~gGaCGyg~~~~~~~g~~vAA~S-~lf~~G~~CGaCyeVrC~~~ 91 (93)
..++.+|++++||||+++++.|+ ++|||||++++..|++.++||+| +||++|++||+||||||.++
T Consensus 13 ~~~~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~p~~~~~aAls~~lf~~G~~CG~Cy~V~c~~~ 81 (245)
T 2hcz_X 13 TNYNGKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEK 81 (245)
T ss_dssp SCCCCCCEEEEEEECSCTTSCSSTTSCCTTCCCCTTSTTTTTCEEEECHHHHGGGTSTTCEEEEECCSS
T ss_pred cccCCceeeeEEEEeCCCCCCCcCCCCccCCCCCCCcCCCCCEEEEeCHHHcCCchhcCCeEEEEeCCC
Confidence 45788999999999999999888 89999999988889999999999 99999999999999999864
No 3
>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1
Probab=99.74 E-value=5.1e-19 Score=129.60 Aligned_cols=56 Identities=29% Similarity=0.481 Sum_probs=50.8
Q ss_pred CCceeeeEEEcCCCCCCCCCCCcCCCC-----CCCCCCCCcceeeec-ccCCCC------CCCcceEEEEeCC
Q 034491 30 DCFIRSRAAHYPNSDEQGTDSGACGFG-----SFGATINGGDVSAAS-GLYRNG------LGCGACYQVHISN 90 (93)
Q Consensus 30 ~~w~~g~AT~Yg~~~~~g~~gGaCGyg-----~~~~~~~g~~vAA~S-~lf~~G------~~CGaCyeVrC~~ 90 (93)
..|+.++||||++. ++|||||| ++++.++|.++||+| +||++| ++||+||||+|++
T Consensus 12 ~g~~~A~aT~Yg~~-----~gGACGyG~~~~~~l~~~gyg~~tAALStaLFn~G~~~w~G~~CG~Cyel~c~~ 79 (181)
T 1wc2_A 12 NGKSCASTTNYHDS-----HKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTG 79 (181)
T ss_dssp TTEEEEEEEEECCC-----BCTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEE
T ss_pred CCccccceeEecCC-----CCcccCcCcCCCCCccccCCcceeeecCHHHhCCCccccccccCCCcEEEEcCC
Confidence 45999999999985 78999999 677778999999999 999997 8999999999965
No 4
>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A
Probab=99.37 E-value=4.5e-13 Score=98.45 Aligned_cols=53 Identities=13% Similarity=0.058 Sum_probs=45.0
Q ss_pred CceeeeEEEcCCCCCCCCCCCcCCCCCCCCCCCCcceeeec-ccCCCC----CCCcceEEEEeCC
Q 034491 31 CFIRSRAAHYPNSDEQGTDSGACGFGSFGATINGGDVSAAS-GLYRNG----LGCGACYQVHISN 90 (93)
Q Consensus 31 ~w~~g~AT~Yg~~~~~g~~gGaCGyg~~~~~~~g~~vAA~S-~lf~~G----~~CGaCyeVrC~~ 90 (93)
+.+.|+||||++.. ++||||+. ..+++.++||+| .+|++| ..||+||||+|.+
T Consensus 5 ~~~~G~aT~Y~~g~----~~GACG~~---~~~~~~~~aAls~~~f~~G~~~~~~CG~c~~v~~~~ 62 (208)
T 3d30_A 5 DLHEGYATYTGSGY----SGGAFLLD---PIPSDMEITAINPADLNYGGVKAALAGSYLEVEGPK 62 (208)
T ss_dssp CCEEEEEEECSTTS----SSCTTCCC---CCCTTCCEEEECHHHHTGGGCTTTTTTCEEEEEETT
T ss_pred CcEEEEEEEcCCCC----CCCcCCCC---CCCCCCEEEEeCHHHhCCCCcCccccCCEEEEEeCC
Confidence 45789999999753 67999986 346788999999 999998 8999999999954
No 5
>1bw3_A Barwin, basic barley SEED protein; lectin; NMR {Hordeum vulgare} SCOP: b.52.1.2 PDB: 1bw4_A
Probab=90.27 E-value=0.16 Score=34.84 Aligned_cols=40 Identities=23% Similarity=0.265 Sum_probs=25.0
Q ss_pred CCCcCCCCCCCCC-----CCCcceeeec-ccC-CCCCCCcceEEEEeCC
Q 034491 49 DSGACGFGSFGAT-----INGGDVSAAS-GLY-RNGLGCGACYQVHISN 90 (93)
Q Consensus 49 ~gGaCGyg~~~~~-----~~g~~vAA~S-~lf-~~G~~CGaCyeVrC~~ 90 (93)
..+.|+--+..+. .|+ -.|+. .+. +++..||+|+||++..
T Consensus 27 ~s~~C~t~da~~~~~~~~~y~--wtA~~g~~gp~~g~~CG~cv~Vtn~~ 73 (125)
T 1bw3_A 27 VSAYCATWDASKPLSWRSKYG--WTAFCGPAGPRGQAACGKCLRVTNPA 73 (125)
T ss_dssp TCCTTHHHHTTSCHHHHHHSC--CEESCSTTCCCSGGGTTCEEEEEETT
T ss_pred eeEeeecccCCCceeEecCCC--ceEeccCCCCCCCcccCCEEEeEeCC
Confidence 5588975221111 122 23455 444 8889999999999874
No 6
>3m3g_A EPL1 protein; fungal, plant defense, fungus, polysaccharide-binding protei; 1.39A {Hypocrea virens}
Probab=83.31 E-value=1.2 Score=30.33 Aligned_cols=23 Identities=17% Similarity=0.599 Sum_probs=16.6
Q ss_pred cceeeec--ccCCCCCCCcceEEEEe
Q 034491 65 GDVSAAS--GLYRNGLGCGACYQVHI 88 (93)
Q Consensus 65 ~~vAA~S--~lf~~G~~CGaCyeVrC 88 (93)
.+|.+.. .=|| ...||.||||+=
T Consensus 44 P~IGg~~~i~gwn-s~~CGtC~~lty 68 (120)
T 3m3g_A 44 PYIGGAAAVAGWN-SASCGTCWKLQY 68 (120)
T ss_dssp TSEEEETTCCSTT-CTTTTCEEEEEE
T ss_pred CccccccccccCC-CCCCCceEEEEE
Confidence 3566655 4566 489999999974
No 7
>2kqa_A Cerato-platanin; elicitor, secreted, toxin; NMR {Ceratocystis platani}
Probab=82.12 E-value=1.8 Score=29.80 Aligned_cols=23 Identities=26% Similarity=0.664 Sum_probs=17.7
Q ss_pred cceeeec--ccCCCCCCCcceEEEEe
Q 034491 65 GDVSAAS--GLYRNGLGCGACYQVHI 88 (93)
Q Consensus 65 ~~vAA~S--~lf~~G~~CGaCyeVrC 88 (93)
.+|.+.. +=|| ...||.||||+=
T Consensus 50 P~IGga~~iagWN-S~~CGtC~~lty 74 (129)
T 2kqa_A 50 PNVGGIPDIAGWD-SPSCGTCWKVTI 74 (129)
T ss_dssp SSEEEETTCCSTT-CTTCSCEEEEEE
T ss_pred CeeccchhhccCC-CCCCCceEEEEE
Confidence 4566666 4577 699999999974
No 8
>3sul_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.63A {Moniliophthora perniciosa}
Probab=80.21 E-value=1.5 Score=29.92 Aligned_cols=22 Identities=36% Similarity=0.729 Sum_probs=16.7
Q ss_pred eeeec--ccCCCCCCCcceEEEEeC
Q 034491 67 VSAAS--GLYRNGLGCGACYQVHIS 89 (93)
Q Consensus 67 vAA~S--~lf~~G~~CGaCyeVrC~ 89 (93)
|.+.. +=||+ ..||.|||++=.
T Consensus 46 IGg~~~V~gwnS-~~CGtC~~lty~ 69 (122)
T 3sul_A 46 VGAVDTITGWNS-ESCGTCYQITWS 69 (122)
T ss_dssp EEEETTCCSTTC-TTTTCEEEEEET
T ss_pred cccccccccCCC-CCCCceEEEEEc
Confidence 65555 55776 999999999744
No 9
>3suk_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}
Probab=75.97 E-value=2.6 Score=28.78 Aligned_cols=23 Identities=30% Similarity=0.807 Sum_probs=16.8
Q ss_pred cceeeec--ccCCCCCCCcceEEEEe
Q 034491 65 GDVSAAS--GLYRNGLGCGACYQVHI 88 (93)
Q Consensus 65 ~~vAA~S--~lf~~G~~CGaCyeVrC 88 (93)
.+|.+.. .=||+ ..||.|||++=
T Consensus 45 P~IGg~~~i~gwnS-~~CGtC~~lty 69 (125)
T 3suk_A 45 PHIGASSDIGGFNS-PACGNCYTISF 69 (125)
T ss_dssp TSEEEETTCCSTTC-TTTTCEEEEEE
T ss_pred CeeccccccccCCC-CCCCeeEEEEE
Confidence 3466655 45764 89999999974
No 10
>3suj_A Cerato-platanin 1; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}
Probab=75.54 E-value=2.7 Score=28.72 Aligned_cols=25 Identities=32% Similarity=0.677 Sum_probs=17.5
Q ss_pred cceeeec--ccCCCCCCCcceEEEEeCC
Q 034491 65 GDVSAAS--GLYRNGLGCGACYQVHISN 90 (93)
Q Consensus 65 ~~vAA~S--~lf~~G~~CGaCyeVrC~~ 90 (93)
.+|.+.. .=||. ..||.||||+=.+
T Consensus 44 P~IGg~~~i~gwns-~~CGtC~~lty~g 70 (127)
T 3suj_A 44 PCIGGSSDIAGYNS-PNCGSCYQLTYSS 70 (127)
T ss_dssp TSEEEETTCCSTTC-TTTTCEEEEEECC
T ss_pred CeeccccccccCCC-CCCCceEEEEECC
Confidence 3466555 45664 8999999997543
No 11
>3nrl_A Uncharacterized protein rumgna_01417; beta protein, structural genomics, PSI-2, protein structure initiative; 1.90A {Ruminococcus gnavus}
Probab=61.72 E-value=4.8 Score=25.72 Aligned_cols=19 Identities=32% Similarity=0.964 Sum_probs=15.0
Q ss_pred ccCCCCCCCcceEEEEeCC
Q 034491 72 GLYRNGLGCGACYQVHISN 90 (93)
Q Consensus 72 ~lf~~G~~CGaCyeVrC~~ 90 (93)
.-|..|..||-||||+=.+
T Consensus 25 ~~~ygGlHCGE~feV~v~~ 43 (81)
T 3nrl_A 25 ESFYGGLHCGECFDVKVKD 43 (81)
T ss_dssp TEECCCCCTTCEEEEEETT
T ss_pred ccccCCcccccEEEEEECC
Confidence 4466789999999997543
No 12
>3sum_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.87A {Moniliophthora perniciosa}
Probab=57.30 E-value=8 Score=26.80 Aligned_cols=21 Identities=24% Similarity=0.578 Sum_probs=14.7
Q ss_pred ceeeecccCCCCCCCcceEEEEeC
Q 034491 66 DVSAASGLYRNGLGCGACYQVHIS 89 (93)
Q Consensus 66 ~vAA~S~lf~~G~~CGaCyeVrC~ 89 (93)
+|.++. || ...||.||||+=.
T Consensus 49 ~igg~~--wn-s~~CGtCwkLtY~ 69 (136)
T 3sum_A 49 HFVAAP--EA-QTECGSCWKLRYK 69 (136)
T ss_dssp SEEECC--BT-TBCTTCEEEEEET
T ss_pred cccccc--cC-CCCCCceEEEEEC
Confidence 355444 44 6999999999743
No 13
>4avr_A PA4485; unknown function, GRAM-negative bacteria, infectious disease structure-based inhibitor design; 1.08A {Pseudomonas aeruginosa PA01}
Probab=38.51 E-value=27 Score=22.53 Aligned_cols=45 Identities=20% Similarity=0.048 Sum_probs=23.8
Q ss_pred eeeeEEEcCCCCCCCCCCCcCCCCCCCCCCCCcceeeecccCCCCCCCcceEEEEe
Q 034491 33 IRSRAAHYPNSDEQGTDSGACGFGSFGATINGGDVSAASGLYRNGLGCGACYQVHI 88 (93)
Q Consensus 33 ~~g~AT~Yg~~~~~g~~gGaCGyg~~~~~~~g~~vAA~S~lf~~G~~CGaCyeVrC 88 (93)
..|.|+|||+.... .-.|||=-. ....++||--.| -||.--+|+-
T Consensus 2 ~~G~ASwYg~~f~G--~~TA~Ge~~----~~~~~tAAH~tl-----P~gt~vrVtN 46 (95)
T 4avr_A 2 DTGEASYYGSRHAG--LRTASGERY----NPNAMTAAHRTL-----PFGARVRVTN 46 (95)
T ss_dssp EEEEEEECCGGGTT--SBCTTSCBC----CTTSCEEECSSS-----CTTCEEEEEE
T ss_pred CEEEEEEECCccCC--CCCCCccCc----CCCCCEEEcCCC-----CCCcEEEEEE
Confidence 47999999964211 235664321 122455544344 3666666654
No 14
>3bx4_B Aggretin beta chain; toxin; 1.70A {Agkistrodon rhodostoma} PDB: 2vrp_B
Probab=36.54 E-value=11 Score=23.73 Aligned_cols=9 Identities=22% Similarity=0.711 Sum_probs=5.8
Q ss_pred ccCCCCcee
Q 034491 26 ETCPDCFIR 34 (93)
Q Consensus 26 ~~~~~~w~~ 34 (93)
..|+.+|..
T Consensus 23 ~~Cp~gw~~ 31 (146)
T 3bx4_B 23 ADCPSGWSS 31 (146)
T ss_dssp --CCTTCEE
T ss_pred CCCCcCcEe
Confidence 479999965
Done!