BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 034496
         (93 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q0WMN5|Y3913_ARATH Uncharacterized protein At3g49140 OS=Arabidopsis thaliana
           GN=At3g49140 PE=1 SV=2
          Length = 499

 Score = 34.7 bits (78), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 12  SKQVLEAKMIWVDRLGFDVRISCPQKGLFDVRIPFPTEVTDEKGAK 57
           S Q  E K+I +D LGFD+R+ C    +  +R  F T  T E+ A+
Sbjct: 435 SIQAEEVKLIGIDSLGFDLRL-CAGAKIESLRFAFSTRATSEENAE 479


>sp|Q641I1|F135B_XENLA Protein FAM135B OS=Xenopus laevis GN=fam135b PE=2 SV=1
          Length = 1376

 Score = 32.0 bits (71), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 6/55 (10%)

Query: 44  IPFPTEVTDEKGAKSSFNCMSQQAWEVEKNYQSP------NFKKVKHLKQIPYRG 92
           +P P   T + GAK S + +++   +V + YQ P       + KVK   Q  Y+G
Sbjct: 508 LPIPPSETSDSGAKLSLSALNEDCDQVTRCYQEPKRTPGVTYIKVKPQSQDQYKG 562


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.324    0.137    0.436 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,801,071
Number of Sequences: 539616
Number of extensions: 1171688
Number of successful extensions: 3160
Number of sequences better than 100.0: 3
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 3160
Number of HSP's gapped (non-prelim): 3
length of query: 93
length of database: 191,569,459
effective HSP length: 63
effective length of query: 30
effective length of database: 157,573,651
effective search space: 4727209530
effective search space used: 4727209530
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)