BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 034497
         (93 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P46521|LEA5A_GOSHI Late embryogenesis abundant protein Lea5-A OS=Gossypium hirsutum
          GN=LEA5-A PE=2 SV=1
          Length = 105

 Score = 35.8 bits (81), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 30/58 (51%)

Query: 28 GKQPAAAEVMRKMTDMKAESVCGVEKEEFWMRDPNTGNWIPESQFNQIDAADLRDQLL 85
          G+  A  +V R+    ++ S         W  DP TG + PE+   +IDAADLR+ +L
Sbjct: 41 GRPGAMGKVERRYAMKESSSSETRAYSSAWAPDPVTGYYRPENCGAEIDAADLREMML 98


>sp|P46522|LEA5D_GOSHI Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum
          GN=LEA5-D PE=2 SV=1
          Length = 105

 Score = 34.7 bits (78), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 15/29 (51%), Positives = 20/29 (68%)

Query: 57 WMRDPNTGNWIPESQFNQIDAADLRDQLL 85
          W  DP TG + PE+   +IDAA+LR+ LL
Sbjct: 70 WAPDPVTGYYRPENCGAEIDAAELREMLL 98


>sp|P32292|ARG2_VIGRR Indole-3-acetic acid-induced protein ARG2 OS=Vigna radiata var.
          radiata GN=ARG2 PE=2 SV=1
          Length = 99

 Score = 34.7 bits (78), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 2/42 (4%)

Query: 46 ESVCGVEKEEFWMRDPNTGNWIPESQFNQIDAADLRDQLLPK 87
          E V G EK   W+ DP TG + PE+  N+ID AD+R  +L K
Sbjct: 56 EKVRGGEKVS-WVPDPVTGYYRPENT-NEIDVADMRATVLGK 95


>sp|Q39644|LEA5_CITSI Late embryogenesis abundant protein Lea5 OS=Citrus sinensis
          GN=LEA5 PE=2 SV=1
          Length = 97

 Score = 33.5 bits (75), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 14/29 (48%), Positives = 20/29 (68%)

Query: 57 WMRDPNTGNWIPESQFNQIDAADLRDQLL 85
          W  DP TG + PE++  +ID A+LR+ LL
Sbjct: 62 WAPDPITGYYRPENRAVEIDPAELREMLL 90


>sp|A9I4I5|SYP_BORPD Proline--tRNA ligase OS=Bordetella petrii (strain ATCC BAA-461 /
           DSM 12804 / CCUG 43448) GN=proS PE=3 SV=1
          Length = 576

 Score = 30.8 bits (68), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 5/59 (8%)

Query: 24  GNVGGKQPAAAEVMRKMTDMKAESVCGVEKEEFWMRDPNTGNWIPESQFNQIDAADLRD 82
           G +G   P      R + +M A+ VCG  +E+F  +  N G  +PE +      ADLR+
Sbjct: 339 GPIGTALPVRVVADRTVANM-ADFVCGANREDFHYQGANWGRDLPEPEL----VADLRN 392


>sp|Q5UP58|YR592_MIMIV Putative helicase R592 OS=Acanthamoeba polyphaga mimivirus
           GN=MIMI_R592 PE=4 SV=1
          Length = 841

 Score = 30.8 bits (68), Expect = 2.6,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 6/79 (7%)

Query: 14  FCRRSNAVAAGNVGGKQPAAAEVMRKMTDMKAESVCGVEKEEFWMRDPNTGNWIPESQFN 73
           FC +        VG K P     ++   D +  S  G   ++           + + +FN
Sbjct: 471 FCLKCLLTTLKTVGSKCPYCRHAIKSNKDYQIISSGGTSNKK------KKSEIVGKYKFN 524

Query: 74  QIDAADLRDQLLPKIKKND 92
           ++D AD+ +Q+L  I KND
Sbjct: 525 EMDKADVLEQVLSYISKND 543


>sp|A9B660|SYA_HERA2 Alanine--tRNA ligase OS=Herpetosiphon aurantiacus (strain ATCC
           23779 / DSM 785) GN=alaS PE=3 SV=1
          Length = 889

 Score = 30.0 bits (66), Expect = 4.3,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 6/81 (7%)

Query: 8   SFLLLRFCRRSNAVAAGNVGGKQPAAAEVMRKMTDMKAESVCGVEKEEFWMRDPNTGNWI 67
           S++L R  RR+ A     +G K P  AE +  + DM   +   +  ++ ++ +  TG   
Sbjct: 304 SYVLRRLVRRA-AYFGQTIGFKAPFLAETIATVIDMMGAAYPELRSKQAYIAEVVTGE-- 360

Query: 68  PESQFNQIDAADLR--DQLLP 86
            E +FN+  A  LR  + +LP
Sbjct: 361 -EERFNKTLAGGLRQLEAMLP 380


>sp|A1K976|SYP_AZOSB Proline--tRNA ligase OS=Azoarcus sp. (strain BH72) GN=proS PE=3
           SV=1
          Length = 581

 Score = 28.9 bits (63), Expect = 9.8,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 5/59 (8%)

Query: 24  GNVGGKQPAAAEVMRKMTDMKAESVCGVEKEEFWMRDPNTGNWIPESQFNQIDAADLRD 82
           G +G  QP      R + +M A+ VCG   E+F     N G  +PE        AD+R+
Sbjct: 345 GPIGLAQPVKVIADRTVANM-ADFVCGANAEDFHYTGANWGRDLPEPDL----VADIRN 398


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.317    0.129    0.384 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,153,381
Number of Sequences: 539616
Number of extensions: 1107950
Number of successful extensions: 2850
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2846
Number of HSP's gapped (non-prelim): 13
length of query: 93
length of database: 191,569,459
effective HSP length: 63
effective length of query: 30
effective length of database: 157,573,651
effective search space: 4727209530
effective search space used: 4727209530
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)