BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034498
MGGCVLRFLIGAVIFLGVIWLLFAGILANHATKTTVTVPPTEISKHWKLIAREKHHAHQD
MDLNYVSKRRVPNGPDPIHNRRASKSRQPPGRV

High Scoring Gene Products

Symbol, full name Information P value
CLE25
AT3G28455 		protein from Arabidopsis thaliana 1.6e-13
CLE26
AT1G69970 		protein from Arabidopsis thaliana 9.0e-06

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034498
        (93 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:504955760 - symbol:CLE25 "AT3G28455" species:3...   176  1.6e-13   1
TAIR|locus:2020683 - symbol:CLE26 "AT1G69970" species:370...   103  9.0e-06   1


>TAIR|locus:504955760 [details] [associations]
            symbol:CLE25 "AT3G28455" species:3702 "Arabidopsis
            thaliana" [GO:0005102 "receptor binding" evidence=ISS] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0007165 "signal transduction"
            evidence=ISS] [GO:0048046 "apoplast" evidence=RCA] [GO:0033612
            "receptor serine/threonine kinase binding" evidence=IPI]
            GO:GO:0007275 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005615
            EMBL:AB026644 GO:GO:0045168 EMBL:AY084776 IPI:IPI00517238
            RefSeq:NP_683600.1 UniGene:At.44896 EnsemblPlants:AT3G28455.1
            GeneID:822475 KEGG:ath:AT3G28455 GeneFarm:129 TAIR:At3g28455
            eggNOG:NOG275929 HOGENOM:HOG000064670 InParanoid:Q8LFL4 OMA:DPIHNRK
            PhylomeDB:Q8LFL4 ProtClustDB:CLSN2917957 Genevestigator:Q8LFL4
            Uniprot:Q8LFL4
        Length = 81

 Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 42/90 (46%), Positives = 56/90 (62%)

Query:     1 MGGCVLRFLIGAVIFLGVIWLLFAGILANHATKTTVTVPPTEISKHWKLIAREKHHAHQD 60
             MGG  +R L+G +  LG+I  L  GILAN A     +VP +E  K  +   +       D
Sbjct:     1 MGGNGIRALVGVIASLGLIVFLLVGILANSAP----SVPSSENVKTLRFSGK-------D 49

Query:    61 MDLNYVSKRRVPNGPDPIHNRRASKSRQPP 90
             ++L +VSKR+VPNGPDPIHNR+A  SR+PP
Sbjct:    50 VNLFHVSKRKVPNGPDPIHNRKAETSRRPP 79


>TAIR|locus:2020683 [details] [associations]
            symbol:CLE26 "AT1G69970" species:3702 "Arabidopsis
            thaliana" [GO:0005102 "receptor binding" evidence=ISS] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0007165 "signal
            transduction" evidence=ISS] [GO:0048046 "apoplast" evidence=RCA]
            [GO:0033612 "receptor serine/threonine kinase binding"
            evidence=IPI] GO:GO:0007275 EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0005615 GO:GO:0048046 GO:GO:0033612 EMBL:AC002062
            GO:GO:0045168 HOGENOM:HOG000064670 EMBL:DQ446415 EMBL:DQ652924
            IPI:IPI00536663 IPI:IPI00891204 PIR:C96722 RefSeq:NP_001117575.1
            RefSeq:NP_177155.1 UniGene:At.66123 EnsemblPlants:AT1G69970.1
            GeneID:843334 KEGG:ath:AT1G69970 GeneFarm:130 TAIR:At1g69970
            eggNOG:NOG257049 OMA:PIHNRFL PhylomeDB:O04547
            ProtClustDB:CLSN2682593 Genevestigator:O04547 Uniprot:O04547
        Length = 118

 Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
 Identities = 32/78 (41%), Positives = 43/78 (55%)

Query:    16 LGVIWLLF--AGILANHAT--KTT-VTVPPTEISKHWKLIAREKHHAHQDMDLNYV-SKR 69
             +GV+ LL   A +L N+    KT  +T      +   K I +E     ++ DL+YV SKR
Sbjct:    19 VGVVTLLMIDAFVLQNNKEDDKTKEITTAVNMNNSDAKEIQQELEDGSRNDDLSYVASKR 78

Query:    70 RVPNGPDPIHNRRASKSR 87
             +VP GPDPIHNR    SR
Sbjct:    79 KVPRGPDPIHNRFLLLSR 96


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.139   0.446    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       93        93   0.00091  102 3  11 22  0.46    29
                                                     29  0.41    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  574 (61 KB)
  Total size of DFA:  121 KB (2078 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.36u 0.08s 12.44t   Elapsed:  00:00:02
  Total cpu time:  12.36u 0.08s 12.44t   Elapsed:  00:00:02
  Start:  Thu May  9 17:17:52 2013   End:  Thu May  9 17:17:54 2013

Back to top