BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034521
(92 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLG 72
L F++YD D + K+S +++L+VLR + G +SDEQ + + ++A DS ++
Sbjct: 115 LHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFT 174
Query: 73 DFIKVF 78
+F+KV
Sbjct: 175 EFVKVL 180
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 42.0 bits (97), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLG 72
L F++YD D + K+S +++L+VLR + G +SDEQ + + ++A DS ++
Sbjct: 115 LHFAFRLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFT 174
Query: 73 DFIKVF 78
+F+KV
Sbjct: 175 EFVKVL 180
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLG 72
L F++YD D +GK+S +++L+VLR + G +++EQ E + + ++A D ++
Sbjct: 116 LHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFV 175
Query: 73 DFIKVFGNSGLKMEVE 88
+F K S KM+VE
Sbjct: 176 EFTK----SLEKMDVE 187
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLG 72
L F++YD D +G +S ++ +VL+ + G+ + D Q +Q++ + +A D ++
Sbjct: 92 LRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFE 151
Query: 73 DFIKVFGNSGLKMEVEVPVD 92
+F V G GL + ++ VD
Sbjct: 152 EFCAVVG--GLDIHKKMVVD 169
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 16 IFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLGDFI 75
+ ++D+D NG+V F + +E + F +EQ L F+ +D Y++ G+
Sbjct: 58 VIDIFDTDGNGEVDFKEFIEGV----SQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELF 113
Query: 76 KVF 78
+V
Sbjct: 114 QVL 116
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLG 72
L F++YD D +G +S ++ +VL+ + G+ + D Q +Q++ + +A D ++
Sbjct: 91 LRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFE 150
Query: 73 DFIKVFGNSGLKMEVEVPVD 92
+F V G GL + ++ VD
Sbjct: 151 EFCAVVG--GLDIHKKMVVD 168
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 16 IFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLGDFI 75
+ ++D+D NG+V F + +E + F +EQ L F+ +D Y++ G+
Sbjct: 57 VIDIFDTDGNGEVDFKEFIEGV----SQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELF 112
Query: 76 KVF 78
+V
Sbjct: 113 QVL 115
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLG 72
L F++YD D +G +S ++ +VL+ + G+ + D Q +Q++ + +A D ++
Sbjct: 78 LRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFE 137
Query: 73 DFIKVFGNSGLKMEVEVPVD 92
+F V G GL + ++ VD
Sbjct: 138 EFCAVVG--GLDIHKKMVVD 155
Score = 27.7 bits (60), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 16 IFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLGDFI 75
+ ++D+D NG+V F + +E + F +EQ L F+ +D Y++ G+
Sbjct: 44 VIDIFDTDGNGEVDFKEFIEGV----SQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELF 99
Query: 76 KVF 78
+V
Sbjct: 100 QVL 102
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLG 72
L F++YD D +G +S ++ +VL+ + G+ + D Q +Q++ + +A D ++
Sbjct: 77 LRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFE 136
Query: 73 DFIKVFGNSGLKMEVEVPVD 92
+F V G GL + ++ VD
Sbjct: 137 EFCAVVG--GLDIHKKMVVD 154
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 16 IFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLGDFI 75
+ ++D+D NG+V F + +E + F +EQ L F+ +D Y++ G+
Sbjct: 43 VIDIFDTDGNGEVDFKEFIEGV----SQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELF 98
Query: 76 KVF 78
+V
Sbjct: 99 QVL 101
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain
(T94-Y172) Of The Human Centrin 2 In Complex With A
Repeat Sequence Of Human Sfi1 (R641-T660)
Length = 79
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLGDFIK 76
FK++D D GK+SF ++ V ++L G ++DE+ ++++ + +D D ++ +F++
Sbjct: 17 FKLFDDDETGKISFKNLKRVAKEL-GENLTDEELQEMIDEADRDG----DGEVSEQEFLR 71
Query: 77 VFGNSGL 83
+ + L
Sbjct: 72 IMKKTSL 78
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 33.5 bits (75), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLGDFIK 76
FK++D D GK+SF ++ V ++L G ++DE+ ++++ + +D D ++ +F++
Sbjct: 27 FKLFDDDETGKISFKNLKRVAKEL-GENLTDEELQEMIDEADRDG----DGEVSEQEFLR 81
Query: 77 VFGNSGL 83
+ + L
Sbjct: 82 IMKKTSL 88
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 33.1 bits (74), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLG 72
L FKV+D D NG +S +++ V+ +L G ++DE+ EQ++ K+A D +
Sbjct: 6 LKEAFKVFDKDQNGYISASELRHVMINL-GEKLTDEEVEQMI----KEADLDGDGQVNYE 60
Query: 73 DFIKVF 78
+F+K+
Sbjct: 61 EFVKMM 66
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 33.1 bits (74), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLG 72
L FKV+D D NG +S +++ V+ +L G ++DE+ EQ++ K+A D +
Sbjct: 11 LKEAFKVFDKDQNGYISASELRHVMINL-GEKLTDEEVEQMI----KEADLDGDGQVNYE 65
Query: 73 DFIKVF 78
+F+K+
Sbjct: 66 EFVKMM 71
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 32.7 bits (73), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLGDFIK 76
F+++D D GK+SF ++ V ++L G M+DE+ ++++ + +D D + +F +
Sbjct: 87 FRLFDDDETGKISFKNLKRVAKEL-GENMTDEELQEMIDEADRDG----DGEVNEEEFFR 141
Query: 77 VFGNSGL 83
+ + L
Sbjct: 142 IMKKTSL 148
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 32.7 bits (73), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLG 72
L FKV+D D NG +S +++ V+ +L G ++DE+ EQ++ K+A D +
Sbjct: 85 LKEAFKVFDKDQNGYISASELRHVMINL-GEKLTDEEVEQMI----KEADLDGDGQVNYE 139
Query: 73 DFIKVF 78
+F+K+
Sbjct: 140 EFVKMM 145
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 32.3 bits (72), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLGDFIK 76
FK++D D GK+SF ++ V ++L G ++DE+ ++ + + +D D ++ +F++
Sbjct: 110 FKLFDDDETGKISFKNLKRVAKEL-GENLTDEELQEXIDEADRDG----DGEVSEQEFLR 164
Query: 77 VFGNSGL 83
+ + L
Sbjct: 165 IXKKTSL 171
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 32.3 bits (72), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLGDFIK 76
FK++D D GK+SF ++ V ++L G ++DE+ ++++ + +D D ++ +F++
Sbjct: 85 FKLFDDDETGKISFKNLKRVAKEL-GENLTDEELQEMIDEADRDG----DGEVSEQEFLR 139
Query: 77 VF 78
+
Sbjct: 140 IM 141
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQ---REQVLTQVFKDAGYTRDSYL 69
L FK+YD+D NG + N++L++ ++ ++ +Q E+ + VF D L
Sbjct: 95 LKWYFKLYDADGNGSIDKNELLDMF--MAVQALNGQQTLSPEEFINLVFHKIDINNDGEL 152
Query: 70 TLGDFI 75
TL +FI
Sbjct: 153 TLEEFI 158
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLG 72
+ IFK +D++ +GK+S +++ + LR L GS +DE ++++ ++ D D ++
Sbjct: 4 MERIFKRFDTNGDGKISLSELTDALRTL-GSTSADEV-QRMMAEIDTDG----DGFIDFN 57
Query: 73 DFIK-VFGNSGLKMEV 87
+FI N GL +V
Sbjct: 58 EFISFCNANPGLMKDV 73
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVLR---DLSGSFMS----DEQREQVLTQVFKDAGYTR 65
L F +YD D NG +S ++LE+++ + S M + E+ ++F+ R
Sbjct: 101 LKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNR 160
Query: 66 DSYLTLGDFIK 76
D L+L +FI+
Sbjct: 161 DGKLSLEEFIR 171
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLG 72
+ IFK +D++ +GK+S +++ + LR L GS +DE ++++ ++ D D ++
Sbjct: 5 MERIFKRFDTNGDGKISLSELTDALRTL-GSTSADEV-QRMMAEIDTDG----DGFIDFN 58
Query: 73 DFIK-VFGNSGLKMEV 87
+FI N GL +V
Sbjct: 59 EFISFCNANPGLMKDV 74
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLG 72
L F+V+D D NG +S ++ V+ +L G ++DE+ + ++ ++A D +
Sbjct: 6 LKEAFRVFDKDQNGFISAAELRHVMTNL-GEKLTDEE----VDEMIREADVDGDGQINYE 60
Query: 73 DFIKVF 78
+F+KV
Sbjct: 61 EFVKVM 66
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 29.6 bits (65), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLGDFIK 76
F+V+D D NG +S D+ V+ +L G ++DE+ + ++ ++A D + DF++
Sbjct: 13 FRVFDKDGNGYISAADLRHVMTNL-GEKLTDEE----VDEMIREADIDGDGQVNYEDFVQ 67
Query: 77 VF 78
+
Sbjct: 68 MM 69
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin
Bound To The Iq Motif Of Nav1.2
Length = 73
Score = 29.6 bits (65), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLGDFIK 76
FKV+D D NG +S ++ V+ +L DE + ++ ++A D ++ +F++
Sbjct: 14 FKVFDRDGNGLISAAELRHVMTNLGEKLTDDE-----VDEMIREADIDGDGHINYEEFVR 68
Query: 77 VF 78
+
Sbjct: 69 MM 70
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 29.6 bits (65), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLG 72
L F+V+D D NG +S ++ V+ +L G ++DE+ + ++ ++A D +
Sbjct: 86 LKEAFRVFDKDQNGFISAAELRHVMTNL-GEKLTDEE----VDEMIREADVDGDGQINYD 140
Query: 73 DFIKVF 78
+F+KV
Sbjct: 141 EFVKVM 146
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 29.3 bits (64), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLGDFIK 76
FKV+D D NG +S ++ V+ +L DE + ++ ++A D ++ +F++
Sbjct: 89 FKVFDRDGNGLISAAELRHVMTNLGEKLTDDE-----VDEMIREADIDGDGHINYEEFVR 143
Query: 77 VF 78
+
Sbjct: 144 MM 145
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 29.3 bits (64), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLGDFIK 76
FKV+D D NG +S ++ V+ +L DE + ++ ++A D ++ +F++
Sbjct: 89 FKVFDRDGNGLISAAELRHVMTNLGEKLTDDE-----VDEMIREADIDGDGHINYEEFVR 143
Query: 77 VF 78
+
Sbjct: 144 MM 145
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 29.3 bits (64), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLG 72
L F+V+D D NG +S ++ V+ +L G ++DE+ + ++ ++A D +
Sbjct: 86 LKEAFRVFDKDQNGFISAAELRHVMTNL-GEKLTDEE----VDEMIREADVDGDGQINYE 140
Query: 73 DFIKVF 78
+F+KV
Sbjct: 141 EFVKVM 146
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 29.3 bits (64), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQR---------EQVLTQVFKDAGY 63
L F +YD D NG +S N++LE++ + ++ + E+ +++K G
Sbjct: 109 LEWAFSLYDVDGNGTISKNEVLEIVXAIFKXITPEDVKLLPDDENTPEKRAEKIWKYFGK 168
Query: 64 TRDSYLTLGDFIK 76
D LT +FI+
Sbjct: 169 NDDDKLTEKEFIE 181
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVL 37
L F +YD D NG +S N++LE++
Sbjct: 101 LEWAFSLYDVDGNGTISKNEVLEIV 125
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVL 37
L F +YD D NG +S N++LE++
Sbjct: 101 LEWAFSLYDVDGNGTISKNEVLEIV 125
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVL 37
L F +YD D NG +S N++LE++
Sbjct: 102 LEWAFSLYDVDGNGTISKNEVLEIV 126
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVL 37
L F +YD D NG +S N++LE++
Sbjct: 101 LEWAFSLYDVDGNGTISKNEVLEIV 125
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVL 37
L F +YD D NG +S N++LE++
Sbjct: 101 LEWAFSLYDVDGNGTISKNEVLEIV 125
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVL 37
L F +YD D NG +S N++LE++
Sbjct: 101 LEWAFSLYDVDGNGTISKNEVLEIV 125
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V+ +L G ++DE+ +Q++ +
Sbjct: 90 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDQMIREA 129
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 27.7 bits (60), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLT 55
F+V+D + NGKV ++ VL L G M++E+ E VL
Sbjct: 93 FRVFDKEGNGKVMGAELRHVLTTL-GEKMTEEEVETVLA 130
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 27.7 bits (60), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLG 72
L F+V+D D NG +S ++ V+ +L G ++DE+ + ++ ++A D +
Sbjct: 82 LKEAFRVFDKDGNGFISAAELRHVMTNL-GEKLTDEE----VDEMIREADVDGDGQVNYE 136
Query: 73 DFIKVF 78
+F++V
Sbjct: 137 EFVQVM 142
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 27.7 bits (60), Expect = 1.5, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLGDFIK 76
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ ++A D + +F++
Sbjct: 381 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMI----READIDGDGQVNYEEFVQ 435
Query: 77 V 77
+
Sbjct: 436 M 436
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 27.7 bits (60), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLG 72
L F+V+D D NG +S ++ V+ +L G ++DE+ + ++ ++A D +
Sbjct: 85 LKEAFRVFDKDGNGFISAAELRHVMTNL-GEKLTDEE----VDEMIREADVDGDGQVNYE 139
Query: 73 DFIKVF 78
+F++V
Sbjct: 140 EFVQVM 145
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/65 (23%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLG 72
L+ F+++D + +G + ++ E+LR +G +++E E ++ KD+ D +
Sbjct: 95 LANCFRIFDKNADGFIDIEELGEILR-ATGEHVTEEDIEDLM----KDSDKNNDGRIDFD 149
Query: 73 DFIKV 77
+F+K+
Sbjct: 150 EFLKM 154
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLG 72
L F+V+D D NG +S ++ V+ +L G ++DE+ + ++ ++A D +
Sbjct: 85 LKEAFRVFDKDGNGFISAAELRHVMTNL-GEKLTDEE----VDEMIREADVDGDGQVNYE 139
Query: 73 DFIKVF 78
+F++V
Sbjct: 140 EFVQVM 145
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/65 (23%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLG 72
L+ F+++D + +G + ++ E+LR +G +++E E ++ KD+ D +
Sbjct: 98 LANCFRIFDKNADGFIDIEELGEILR-ATGEHVTEEDIEDLM----KDSDKNNDGRIDFD 152
Query: 73 DFIKV 77
+F+K+
Sbjct: 153 EFLKM 157
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILE---VLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYL 69
L+ IFK D + +G++ +++E VLR+ + E+ + + K+ + ++ Y+
Sbjct: 357 LTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYI 416
Query: 70 TLGDFIKV 77
+FI V
Sbjct: 417 EYSEFISV 424
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ +
Sbjct: 389 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 428
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 16 IFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDE 48
IFK +D++ +GK+S ++ E L+ L GS DE
Sbjct: 14 IFKRFDANGDGKISAAELGEALKTL-GSITPDE 45
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ +
Sbjct: 390 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 429
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ +
Sbjct: 389 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 428
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ +
Sbjct: 390 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 429
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ +
Sbjct: 390 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 429
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ +
Sbjct: 389 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 428
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ +
Sbjct: 391 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 430
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ +
Sbjct: 390 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 429
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/65 (23%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLG 72
L+ F+++D + +G + ++ E+LR +G +++E E ++ KD+ D +
Sbjct: 98 LADCFRIFDKNADGFIDIEELGEILR-ATGEHVTEEDIEDLM----KDSDKNNDGRIDFD 152
Query: 73 DFIKV 77
+F+K+
Sbjct: 153 EFLKM 157
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ +
Sbjct: 390 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 429
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 16 IFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLGDFI 75
IFK +D++ +GK+S +++ + L+ L GS DE R +++ ++ D D +++ +F
Sbjct: 16 IFKRFDTNGDGKISSSELGDALKTL-GSVTPDEVR-RMMAEIDTDG----DGFISFDEFT 69
Query: 76 K-VFGNSGLKMEV 87
N GL +V
Sbjct: 70 DFARANRGLVKDV 82
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ +
Sbjct: 356 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 395
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 12 FLSVIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGY-TRDSYLT 70
F + +F V+D + +G++ F++ ++ L S + ++ R + GY TR+ L
Sbjct: 64 FATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLD 123
Query: 71 LGDFI-KVFGNSGLKMEVEVP 90
+ D I ++ GN+ VE+P
Sbjct: 124 IVDAIYQMVGNT-----VELP 139
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 27.3 bits (59), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ +
Sbjct: 353 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 392
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ +
Sbjct: 356 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 395
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLGDFIK 76
F+V+D D NG +S ++ V+ +L G ++DE+ + ++ ++A D + +F++
Sbjct: 84 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEE----VDEMIREANIDGDGQVNYEEFVQ 138
Query: 77 VF 78
+
Sbjct: 139 MM 140
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLGDFIK 76
F+V+D D NG +S ++ V+ +L G ++DE+ + ++ ++A D + +F++
Sbjct: 89 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEE----VDEMIREANIDGDGQVNYEEFVQ 143
Query: 77 VF 78
+
Sbjct: 144 MM 145
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/69 (21%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSG----SFMSDEQREQVLTQVFKDAGYTRDSYLTLG 72
F+++D D +G ++ D+ ++ L+G + +S + +Q++ + +++ RD + L
Sbjct: 135 FRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLS 194
Query: 73 DFIKVFGNS 81
+F V S
Sbjct: 195 EFQHVISRS 203
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 26.9 bits (58), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/70 (21%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSG----SFMSDEQREQVLTQVFKDAGYTRDSYLTLG 72
F+++D D +G ++ D+ ++ L+G + +S + +Q++ + +++ RD + L
Sbjct: 104 FRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLS 163
Query: 73 DFIKVFGNSG 82
+F V S
Sbjct: 164 EFQHVISRSP 173
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 26.9 bits (58), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ +
Sbjct: 90 FRVFDKDGNGYISAAELRHVMTNL-GEXLTDEEVDEMIREA 129
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 26.9 bits (58), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ +
Sbjct: 89 FRVFDKDGNGYISAAELRHVMTNL-GEXLTDEEVDEMIREA 128
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLGDFIK 76
F+V+D D NG VS ++ V+ L G +SDE+ ++++ D D + +F++
Sbjct: 89 FRVFDKDGNGFVSAAELRHVMTRL-GEKLSDEEVDEMIRAADTDG----DGQVNYEEFVR 143
Query: 77 VF 78
V
Sbjct: 144 VL 145
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/65 (23%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLG 72
L F+++D + +G + ++ E+LR +G +++E E ++ KD+ D +
Sbjct: 98 LEDCFRIFDKNADGFIDIEELGEILR-ATGEHVTEEDIEDLM----KDSDKNNDGRIDFD 152
Query: 73 DFIKV 77
+F+K+
Sbjct: 153 EFLKM 157
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 12 FLSVIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQ 49
L +IFK D+D NG++ N+ + + G +SD++
Sbjct: 37 LLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDK 74
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal
Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal
Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe
Bound With Er Alpha Peptide
Length = 67
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLGDFIK 76
F+V+D D NG +S ++ V+ +L G ++DE+ + ++ ++A D + +F++
Sbjct: 8 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEE----VDEMIREADIDGDGQVNYEEFVQ 62
Query: 77 VF 78
+
Sbjct: 63 MM 64
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium
Bound Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQ 49
L +IFK D+D NG++ N+ + + G +SD++
Sbjct: 38 LQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDK 74
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ +
Sbjct: 87 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 126
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ +
Sbjct: 90 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 129
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ +
Sbjct: 86 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 125
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 26.6 bits (57), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ +
Sbjct: 90 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 129
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 26.6 bits (57), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLGDFIK 76
F+V+D D NG +S ++ V+ +L G ++DE+ + ++ ++A D + +F++
Sbjct: 11 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEE----VDEMIREADIDGDGQVNYEEFVQ 65
Query: 77 VF 78
+
Sbjct: 66 MM 67
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With
Pyrophosphate
Length = 67
Score = 26.6 bits (57), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLGDFIK 76
F+V+D D NG +S ++ V+ +L G ++DE+ + ++ ++A D + +F++
Sbjct: 11 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEE----VDEMIREADIDGDGQVNYEEFVQ 65
Query: 77 VF 78
+
Sbjct: 66 MM 67
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 26.6 bits (57), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ +
Sbjct: 85 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 124
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 26.6 bits (57), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ +
Sbjct: 91 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 130
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLGDFIK 76
F+V+D D NG +S ++ V+ +L G ++DE+ + ++ ++A D + +F++
Sbjct: 87 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEE----VDEMIREADIDGDGQVNYEEFVQ 141
Query: 77 VF 78
+
Sbjct: 142 MM 143
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ +
Sbjct: 87 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 126
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ +
Sbjct: 90 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 129
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ +
Sbjct: 90 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 129
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin
Carboxy-Terminal Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLGDFIK 76
F+V+D D NG +S ++ V+ +L G ++DE+ + ++ ++A D + +F++
Sbjct: 14 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEE----VDEMIREADIDGDGQVNYEEFVQ 68
Query: 77 VF 78
+
Sbjct: 69 MM 70
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ +
Sbjct: 93 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 132
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ +
Sbjct: 95 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 134
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ +
Sbjct: 89 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 128
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin And 1mm Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin
Length = 74
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLGDFIK 76
F+V+D D NG +S ++ V+ +L G ++DE+ + ++ ++A D + +F++
Sbjct: 15 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEE----VDEMIREADIDGDGQVNYEEFVQ 69
Query: 77 VF 78
+
Sbjct: 70 MM 71
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLGDFIK 76
F+V+D D NG +S ++ V+ +L G ++DE+ + ++ ++A D + +F++
Sbjct: 88 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEE----VDEMIREADIDGDGQVNYEEFVQ 142
Query: 77 VF 78
+
Sbjct: 143 MM 144
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ +
Sbjct: 89 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 128
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ +
Sbjct: 89 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREA 128
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From
Calmodulin To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLGDFIK 76
F+V+D D NG +S ++ V+ +L G ++DE+ + ++ ++A D + +F++
Sbjct: 12 FRVFDKDGNGYISAAELRHVMTNL-GEKLTDEE----VDEMIREADIDGDGQVNYEEFVQ 66
Query: 77 VF 78
+
Sbjct: 67 MM 68
>pdb|2VF1|A Chain A, X-Ray Crystallographic Structure Of The Picobirnavirus
Capsid
pdb|2VF1|B Chain B, X-Ray Crystallographic Structure Of The Picobirnavirus
Capsid
Length = 525
Score = 26.6 bits (57), Expect = 4.0, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Query: 52 QVLTQVFKDAGYTRDSYLTLGDFIKVFGNSGLKMEVEVPVD 92
++L ++ DA D+ GD K FG+ GL E+ VD
Sbjct: 250 ELLDAIYGDA----DAQTMFGDIYKAFGSDGLYSIAEISVD 286
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 26.6 bits (57), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLGDFIK 76
FKV+D D NG +S ++ +R L +M +E +V+ Q G D + +F+
Sbjct: 42 FKVFDRDGNGFISKQELGTAMRSL--GYMPNEVELEVIIQRLDMDG---DGQVDFEEFVT 96
Query: 77 VFG 79
+ G
Sbjct: 97 LLG 99
>pdb|2HYD|A Chain A, Multidrug Abc Transporter Sav1866
pdb|2HYD|B Chain B, Multidrug Abc Transporter Sav1866
pdb|2ONJ|A Chain A, Structure Of The Multidrug Abc Transporter Sav1866 From S.
Aureus In Complex With Amp-Pnp
pdb|2ONJ|B Chain B, Structure Of The Multidrug Abc Transporter Sav1866 From S.
Aureus In Complex With Amp-Pnp
pdb|4A82|A Chain A, Fitted Model Of Staphylococcus Aureus Sav1866 Model Abc
Transporter In The Human Cystic Fibrosis Transmembrane
Conductance Regulator Volume Map Emd-1966.
pdb|4A82|B Chain B, Fitted Model Of Staphylococcus Aureus Sav1866 Model Abc
Transporter In The Human Cystic Fibrosis Transmembrane
Conductance Regulator Volume Map Emd-1966.
pdb|4A82|C Chain C, Fitted Model Of Staphylococcus Aureus Sav1866 Model Abc
Transporter In The Human Cystic Fibrosis Transmembrane
Conductance Regulator Volume Map Emd-1966.
pdb|4A82|D Chain D, Fitted Model Of Staphylococcus Aureus Sav1866 Model Abc
Transporter In The Human Cystic Fibrosis Transmembrane
Conductance Regulator Volume Map Emd-1966
Length = 578
Score = 26.2 bits (56), Expect = 4.5, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 37 LRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLT 70
L+ LS F ++ Q QV+++V D T+D LT
Sbjct: 104 LQALSARFYANNQVGQVISRVINDVEQTKDFILT 137
>pdb|2DG8|A Chain A, Crystal Structure Of The Putative Trasncriptional
Regulator Sco7518 From Streptomyces Coelicolor A3(2)
pdb|2DG8|B Chain B, Crystal Structure Of The Putative Trasncriptional
Regulator Sco7518 From Streptomyces Coelicolor A3(2)
pdb|2DG8|C Chain C, Crystal Structure Of The Putative Trasncriptional
Regulator Sco7518 From Streptomyces Coelicolor A3(2)
pdb|2DG8|D Chain D, Crystal Structure Of The Putative Trasncriptional
Regulator Sco7518 From Streptomyces Coelicolor A3(2)
Length = 193
Score = 26.2 bits (56), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 19/45 (42%)
Query: 12 FLSVIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQ 56
F I V+D ++ E + DL D QR+ VLTQ
Sbjct: 64 FTDHIVAVFDEHLGAAADRDEAREAVADLVHELSEDSQRDLVLTQ 108
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 26.2 bits (56), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQ--REQVLTQVFKDAGYTRDSYLT 70
L FK+YD D NG + ++L +++ + +E E+ VF D L+
Sbjct: 90 LRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELS 149
Query: 71 LGDFIK 76
L +F++
Sbjct: 150 LEEFME 155
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 26.2 bits (56), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/65 (23%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLG 72
L+ F+++D + +G + ++ E+LR +G + +E E ++ KD+ D +
Sbjct: 98 LANCFRIFDKNADGFIDIEELGEILR-ATGEHVIEEDIEDLM----KDSDKNNDGRIDFD 152
Query: 73 DFIKV 77
+F+K+
Sbjct: 153 EFLKM 157
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 26.2 bits (56), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ +
Sbjct: 89 FRVFDKDGNGFISAAELRHVMTNL-GEKLTDEEVDEMIREA 128
>pdb|2DZD|A Chain A, Crystal Structure Of The Biotin Carboxylase Domain Of
Pyruvate Carboxylase
pdb|2DZD|B Chain B, Crystal Structure Of The Biotin Carboxylase Domain Of
Pyruvate Carboxylase
Length = 461
Score = 26.2 bits (56), Expect = 5.3, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 12/71 (16%)
Query: 16 IFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVL---TQVFKDAGYTRD---SYL 69
I +Y+ DC+ + ++EV +S +SDE R+++ Q+ + GY +L
Sbjct: 226 IVHLYERDCSVQRRHQKVVEVAPSVS---LSDELRQRICEAAVQLMRSVGYVNAGTVEFL 282
Query: 70 TLGD---FIKV 77
GD FI+V
Sbjct: 283 VSGDEFYFIEV 293
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 26.2 bits (56), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ +
Sbjct: 87 FRVFDKDGNGFISAAELRHVMTNL-GEKLTDEEVDEMIREA 126
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 26.2 bits (56), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ +
Sbjct: 90 FRVFDKDGNGFISAAELRHVMTNL-GEKLTDEEVDEMIREA 129
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 26.2 bits (56), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 15/65 (23%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLG 72
L+ F+++D + +G + ++ E+LR +G + +E E ++ KD+ D +
Sbjct: 12 LANCFRIFDKNADGFIDIEELGEILR-ATGEHVIEEDIEDLM----KDSDKNNDGRIDFD 66
Query: 73 DFIKV 77
+F+K+
Sbjct: 67 EFLKM 71
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 26.2 bits (56), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ +
Sbjct: 90 FRVFDKDGNGFISAAELRHVMTNL-GEKLTDEEVDEMIREA 129
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 26.2 bits (56), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ +
Sbjct: 89 FRVFDKDGNGFISAAELRHVMTNL-GEKLTDEEVDEMIREA 128
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 25.8 bits (55), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDL 40
F+++D D +GKVS ++ LR L
Sbjct: 11 FQIFDKDNDGKVSIEELGSALRSL 34
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 25.8 bits (55), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQV 57
F+V+D D NG +S ++ V +L G ++DE+ +Q + +
Sbjct: 90 FRVFDKDGNGYISAAELRHVXTNL-GEKLTDEEVDQXIREA 129
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 25.8 bits (55), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 13/64 (20%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLGDFIK 76
FK++D D +GK+S ++ ++ S +E L + + +D + +F++
Sbjct: 423 FKMFDKDGSGKISTKELFKLFSQADSSIQMEE-----LESIIEQVDNNKDGEVDFNEFVE 477
Query: 77 VFGN 80
+ N
Sbjct: 478 MLQN 481
>pdb|2D5W|A Chain A, The Crystal Structure Of Oligopeptide Binding Protein
From Thermus Thermophilus Hb8 Complexed With
Pentapeptide
pdb|2D5W|B Chain B, The Crystal Structure Of Oligopeptide Binding Protein
From Thermus Thermophilus Hb8 Complexed With
Pentapeptide
Length = 603
Score = 25.8 bits (55), Expect = 6.8, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 62 GYTRDSYLTLGDFIKVFGNSGLKMEVE 88
G +++ + GDF++V N +K E+E
Sbjct: 11 GASQEPRVLAGDFLRVISNQAIKSEIE 37
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 25.8 bits (55), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 12/76 (15%)
Query: 13 LSVIFKVYDSDCNGKVSFNDILEV------LRDLSGSFMSDEQR------EQVLTQVFKD 60
L FK+YD D NG + ++L++ L+ + EQ+ E+V+ ++F
Sbjct: 97 LKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLL 156
Query: 61 AGYTRDSYLTLGDFIK 76
D L+L +F++
Sbjct: 157 VDENGDGQLSLNEFVE 172
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 25.8 bits (55), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQ 56
F+V+D D NG +S ++ V+ +L G ++DE+ ++++ +
Sbjct: 90 FRVFDKDGNGFISAAELRHVMTNL-GEKLTDEEVDEMIRE 128
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 25.4 bits (54), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLGDFIK 76
F+V+D D G + ++ VL L G +S+E+ +++L V +D + DF++
Sbjct: 82 FQVFDKDATGMIGVGELRYVLTSL-GEKLSNEEMDELLKGV-----PVKDGMVNYHDFVQ 135
Query: 77 V 77
+
Sbjct: 136 M 136
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 25.4 bits (54), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQ 49
F+++D D GK+S ++ V ++L G ++DE+
Sbjct: 102 FQLFDDDHTGKISIKNLRRVAKEL-GETLTDEE 133
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 25.4 bits (54), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 16 IFKVYDSDCNGKVSFNDILEVL 37
+F +D+D NG VSF D ++ L
Sbjct: 107 LFNAFDTDHNGAVSFEDFIKGL 128
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 25.4 bits (54), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 17 FKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQ 49
F+++D D GK+S ++ V ++L G ++DE+
Sbjct: 102 FQLFDDDHTGKISIKNLRRVAKEL-GETLTDEE 133
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.141 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,670,376
Number of Sequences: 62578
Number of extensions: 92451
Number of successful extensions: 735
Number of sequences better than 100.0: 141
Number of HSP's better than 100.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 552
Number of HSP's gapped (non-prelim): 221
length of query: 92
length of database: 14,973,337
effective HSP length: 59
effective length of query: 33
effective length of database: 11,281,235
effective search space: 372280755
effective search space used: 372280755
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 45 (21.9 bits)