Query 034523
Match_columns 92
No_of_seqs 108 out of 635
Neff 4.8
Searched_HMMs 13730
Date Mon Mar 25 05:38:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034523.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/034523hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1unda_ a.14.1.1 (A:) Advillin 63.7 1.2 8.8E-05 23.1 1.0 18 50-67 1-18 (36)
2 d2bkfa1 d.15.2.2 (A:1-85) Next 59.7 8.2 0.0006 23.0 4.6 50 34-86 9-66 (85)
3 d1nn7a_ d.42.1.2 (A:) Potassiu 54.5 0.86 6.3E-05 27.8 -0.8 55 32-91 2-57 (105)
4 d1y6ia2 a.261.1.1 (A:83-233) M 54.4 0.36 2.6E-05 32.2 -2.8 31 25-58 118-148 (151)
5 d1whza_ d.50.3.2 (A:) Hypothet 46.6 19 0.0014 20.0 4.5 35 28-63 24-60 (70)
6 d1tjya_ c.93.1.1 (A:) AI-2 rec 45.3 12 0.00089 23.8 4.0 31 40-70 2-35 (316)
7 d1ip9a_ d.15.2.2 (A:) Bud emer 42.5 18 0.0013 20.7 4.1 47 33-84 16-70 (85)
8 d1yu5x1 a.14.1.1 (X:10-76) Vil 42.1 4 0.00029 23.6 0.9 19 49-67 31-49 (67)
9 d1z3xa2 a.261.1.1 (A:88-235) G 39.7 0.43 3.1E-05 31.7 -4.3 29 25-56 118-146 (148)
10 d1qzpa_ a.14.1.1 (A:) Dematin 36.6 4.2 0.00031 23.6 0.4 19 49-67 32-50 (68)
11 d3kvta_ d.42.1.2 (A:) akv3.1 v 36.1 2.3 0.00017 25.6 -0.9 55 31-91 3-60 (103)
12 d1y74b1 a.194.1.1 (B:83-132) P 35.9 6.4 0.00047 21.6 1.1 20 49-68 26-49 (50)
13 d1ujsa_ a.14.1.1 (A:) Actin-bi 34.8 6.2 0.00045 23.9 1.0 20 49-68 46-65 (88)
14 d1qusa_ d.2.1.6 (A:) 36 kDa so 32.8 13 0.00093 26.8 2.7 24 48-71 13-36 (322)
15 d1yu8x1 a.14.1.1 (X:42-76) Vil 31.7 7.8 0.00056 19.6 0.9 17 51-67 1-17 (35)
16 d2r85a1 c.30.1.8 (A:1-99) 5-fo 28.9 0.42 3.1E-05 30.1 -5.5 24 25-48 65-88 (99)
17 d2hyja2 a.121.1.1 (A:83-200) P 25.5 19 0.0014 20.7 2.1 32 6-37 2-33 (118)
18 d1b0aa2 c.58.1.2 (A:2-122) Tet 25.1 66 0.0048 19.1 6.6 53 26-91 30-84 (121)
19 d1t1da_ d.42.1.2 (A:) Shaker p 25.0 7.5 0.00054 23.2 0.1 54 32-91 3-59 (100)
20 d1a4ia2 c.58.1.2 (A:2-126) Tet 24.8 68 0.005 19.2 5.2 53 26-91 32-86 (125)
21 d2odgc1 a.140.1.1 (C:2-47) Inn 24.0 23 0.0017 18.9 2.0 22 50-77 5-26 (46)
22 d1dkgd1 c.55.1.1 (D:3-185) Hea 24.0 19 0.0014 22.4 2.0 40 47-86 109-148 (183)
23 d2c35b2 d.230.1.1 (B:1-77) N-t 23.6 51 0.0037 18.0 3.7 27 42-68 9-35 (77)
24 d2pbza1 c.30.1.8 (A:4-99) 5-fo 22.8 0.65 4.8E-05 29.0 -5.4 23 25-47 60-82 (96)
25 d1t2da2 d.162.1.1 (A:151-315) 20.6 66 0.0048 19.5 4.2 32 32-66 126-157 (165)
No 1
>d1unda_ a.14.1.1 (A:) Advillin {Human (Homo sapiens) [TaxId: 9606]}
Probab=63.69 E-value=1.2 Score=23.07 Aligned_cols=18 Identities=22% Similarity=0.560 Sum_probs=16.8
Q ss_pred CCCcHHHHHHHHhHHHhc
Q 034523 50 YLKHPSFQNLLSQAEEEF 67 (92)
Q Consensus 50 ~L~hP~F~~LL~~aeeEf 67 (92)
||+.-.|++++.++.+||
T Consensus 1 yLsd~dF~~vFgmsr~eF 18 (36)
T d1unda_ 1 YLSEQDFVSVFGITRGQF 18 (36)
T ss_dssp CCCHHHHHHHHSSCHHHH
T ss_pred CCCHHHHHHHHCcCHHHH
Confidence 789999999999999997
No 2
>d2bkfa1 d.15.2.2 (A:1-85) Next to BRCA1 gene 1 protein, NBR1 (KIAA0049) {Human (Homo sapiens) [TaxId: 9606]}
Probab=59.70 E-value=8.2 Score=23.03 Aligned_cols=50 Identities=14% Similarity=0.217 Sum_probs=35.6
Q ss_pred EEeecCcceEEEEEccCCCcHHHHHHHHhHHHhcCC--------cCCCCceeeeCCHHHHH
Q 034523 34 VYVGEIEKSRFVVPVSYLKHPSFQNLLSQAEEEFGF--------DHPMGGLTIPCSEKVFM 86 (92)
Q Consensus 34 VyVG~~~~~RfvVp~~~L~hP~F~~LL~~aeeEfG~--------~~~~G~L~iPC~~~~Fe 86 (92)
|..|+ +..||.++.. +++.|.+|..+-+.-|+. +.++--++|.|+++.=|
T Consensus 9 vtf~~-dt~RF~ls~~--~~~~~~~L~~~i~~rf~l~~~~lkY~Ddd~e~v~l~~d~dl~E 66 (85)
T d2bkfa1 9 VTFKN-EIQSFLVSDP--ENTTWADIEAMVKVSFDLNTIQIKYLDEENEEVSINSQGEYEE 66 (85)
T ss_dssp EEETT-EEEEEEESCG--GGCCHHHHHHHHHHHHTCSSEEEEEECTTSCEEEECSHHHHHH
T ss_pred EEECC-ceEEEEecCC--CCCcHHHHHHHHHHhcCcccceEEEEcCCCCEEEEecHHHHHH
Confidence 44455 8899998533 457799999999998885 33434688999976533
No 3
>d1nn7a_ d.42.1.2 (A:) Potassium channel kv4.2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=54.55 E-value=0.86 Score=27.85 Aligned_cols=55 Identities=18% Similarity=0.271 Sum_probs=37.4
Q ss_pred EEEEeecCcceEEEEEccCC-CcHHHHHHHHhHHHhcCCcCCCCceeeeCCHHHHHHHHhc
Q 034523 32 LAVYVGEIEKSRFVVPVSYL-KHPSFQNLLSQAEEEFGFDHPMGGLTIPCSEKVFMDLTSR 91 (92)
Q Consensus 32 ~aVyVG~~~~~RfvVp~~~L-~hP~F~~LL~~aeeEfG~~~~~G~L~iPC~~~~Fe~vl~~ 91 (92)
+.+-||. ++|.+..+-| ++|.- +|........++.++|.+-|--|...|++||+-
T Consensus 2 I~LNVGG---~~f~t~~~TL~~~p~s--~l~~~~~~~~~~~~~~~~FiDRdp~~F~~IL~y 57 (105)
T d1nn7a_ 2 IVLNVSG---TRFQTWQDTLERYPDT--LLGSSERDFFYHPETQQYFFDRDPDIFRHILNF 57 (105)
T ss_dssp EEEEETT---EEEEECHHHHHTSCSS--STTSGGGGGGEEGGGTEEEECSCTTTHHHHHHH
T ss_pred EEEEECC---EEEEEeHHHHhcCCCC--CccccccccCcCCCCCcEEEeCCHHHHHHHHHH
Confidence 4567886 8999988866 45531 122233333344455899999999999999874
No 4
>d1y6ia2 a.261.1.1 (A:83-233) Mg-chelatase cofactor Gun4 {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=54.41 E-value=0.36 Score=32.24 Aligned_cols=31 Identities=29% Similarity=0.518 Sum_probs=19.6
Q ss_pred cCCCCCeEEEEeecCcceEEEEEccCCCcHHHHH
Q 034523 25 STVPKGHLAVYVGEIEKSRFVVPVSYLKHPSFQN 58 (92)
Q Consensus 25 ~~vpkG~~aVyVG~~~~~RfvVp~~~L~hP~F~~ 58 (92)
...|+||+|+.-.- ...| +--+.|+||.|.+
T Consensus 118 l~AP~GHLP~~~~l-rG~~--~~~~l~~h~~~~~ 148 (151)
T d1y6ia2 118 LSAPQGHLPLLNQL-RGVR--VAESLYRHPVWSQ 148 (151)
T ss_dssp TTSCTTCCSCCCCT-TCTH--HHHHHHTSTHHHH
T ss_pred CCCCCCCCCccchh-hhHH--HHHHHHcCcchhh
Confidence 56899999986421 1111 3334889998864
No 5
>d1whza_ d.50.3.2 (A:) Hypothetical protein TTHA1913 {Thermus thermophilus [TaxId: 274]}
Probab=46.61 E-value=19 Score=20.03 Aligned_cols=35 Identities=29% Similarity=0.450 Sum_probs=25.0
Q ss_pred CCCeEEEEeecCcceEEEEEcc--CCCcHHHHHHHHhH
Q 034523 28 PKGHLAVYVGEIEKSRFVVPVS--YLKHPSFQNLLSQA 63 (92)
Q Consensus 28 pkG~~aVyVG~~~~~RfvVp~~--~L~hP~F~~LL~~a 63 (92)
-+|-...|.-+ +.++.+||.. =+.-..+++.|++|
T Consensus 24 qkGSH~~~~~~-~~~~~~v~~~~kei~~gtl~~Ilkqa 60 (70)
T d1whza_ 24 AKGGHRLYTHP-DGRIVVVPFHSGELPKGTFKRILRDA 60 (70)
T ss_dssp EETTEEEEECT-TSCEEEEECSSSSCCHHHHHHHHHHT
T ss_pred cCCceeEEEcC-CCCEEEcCCCCCccCHHHHHHHHHHh
Confidence 36777778765 5667777764 36777788888887
No 6
>d1tjya_ c.93.1.1 (A:) AI-2 receptor LsrB {Salmonella typhi [TaxId: 90370]}
Probab=45.26 E-value=12 Score=23.75 Aligned_cols=31 Identities=16% Similarity=0.131 Sum_probs=24.2
Q ss_pred cceEEEEEccCCCcHHHHHHHHh---HHHhcCCc
Q 034523 40 EKSRFVVPVSYLKHPSFQNLLSQ---AEEEFGFD 70 (92)
Q Consensus 40 ~~~RfvVp~~~L~hP~F~~LL~~---aeeEfG~~ 70 (92)
..+|..+=+..++||.|+...+- +.+++||+
T Consensus 2 ~~~kI~~i~~~~~npf~~~~~~g~~~~a~~~G~~ 35 (316)
T d1tjya_ 2 SAERIAFIPKLVGVGFFTSGGNGAQEAGKALGID 35 (316)
T ss_dssp CCCEEEEECSSSSSHHHHHHHHHHHHHHHHHTCE
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCE
Confidence 45788888999999999988654 45678874
No 7
>d1ip9a_ d.15.2.2 (A:) Bud emergence mediator Bemp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=42.48 E-value=18 Score=20.75 Aligned_cols=47 Identities=13% Similarity=0.173 Sum_probs=32.9
Q ss_pred EEEeecCcceEEEEEccCCCcHHHHHHHHhHHHhcCC--------cCCCCceeeeCCHHH
Q 034523 33 AVYVGEIEKSRFVVPVSYLKHPSFQNLLSQAEEEFGF--------DHPMGGLTIPCSEKV 84 (92)
Q Consensus 33 aVyVG~~~~~RfvVp~~~L~hP~F~~LL~~aeeEfG~--------~~~~G~L~iPC~~~~ 84 (92)
=++.++ +..||.||.+ ..|.+|.++-++-|+. +.++..++|-|+.+.
T Consensus 16 Kv~~~~-D~~~~~l~~~----it~~dL~~kI~~rf~~~~~~lkY~Dedgd~v~i~sD~Dl 70 (85)
T d1ip9a_ 16 KFYYKD-DIFALMLKGD----TTYKELRSKIAPRIDTDNFKLQTKLFDGSGEEIKTDSQV 70 (85)
T ss_dssp EECBTT-CCEEEEECSC----CCHHHHHHHHHHHHTSSCEEEEECCSSSCCSCCCSHHHH
T ss_pred EEEECC-cEEEEEeCCC----CCHHHHHHHHHHHhCCCceEEEEEcCCCCEEEEeCHHHH
Confidence 344465 8999999865 4488888888888862 223345788888665
No 8
>d1yu5x1 a.14.1.1 (X:10-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=42.14 E-value=4 Score=23.57 Aligned_cols=19 Identities=16% Similarity=0.401 Sum_probs=18.0
Q ss_pred cCCCcHHHHHHHHhHHHhc
Q 034523 49 SYLKHPSFQNLLSQAEEEF 67 (92)
Q Consensus 49 ~~L~hP~F~~LL~~aeeEf 67 (92)
.||+.-.|++++.++.+||
T Consensus 31 ~yLsd~dF~~vFgms~~eF 49 (67)
T d1yu5x1 31 NHLSDEDFKAVFGMTRSAF 49 (67)
T ss_dssp GGSCHHHHHHHHSSCHHHH
T ss_pred hhCCHHHHHHHHCcCHHHH
Confidence 6999999999999999998
No 9
>d1z3xa2 a.261.1.1 (A:88-235) GUN4-like protein Ycf53 {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=39.68 E-value=0.43 Score=31.72 Aligned_cols=29 Identities=28% Similarity=0.481 Sum_probs=18.3
Q ss_pred cCCCCCeEEEEeecCcceEEEEEccCCCcHHH
Q 034523 25 STVPKGHLAVYVGEIEKSRFVVPVSYLKHPSF 56 (92)
Q Consensus 25 ~~vpkG~~aVyVG~~~~~RfvVp~~~L~hP~F 56 (92)
...|+||+|+.-. .+-..|=-..|+||.|
T Consensus 118 l~AP~GHLP~~~~---lrg~~~~~~~l~h~a~ 146 (148)
T d1z3xa2 118 LSAPRGHLPLTNQ---LRGVQVLNALLNHPAW 146 (148)
T ss_dssp TTSCTTCCSCCCC---TTCSHHHHHHHTCGGG
T ss_pred CCCCCCCCCcCCc---cchHHHHHHHhcCccc
Confidence 5689999997532 2333334466777765
No 10
>d1qzpa_ a.14.1.1 (A:) Dematin {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.60 E-value=4.2 Score=23.55 Aligned_cols=19 Identities=26% Similarity=0.476 Sum_probs=18.0
Q ss_pred cCCCcHHHHHHHHhHHHhc
Q 034523 49 SYLKHPSFQNLLSQAEEEF 67 (92)
Q Consensus 49 ~~L~hP~F~~LL~~aeeEf 67 (92)
.||+.-.|++++.++.+||
T Consensus 32 ~yLsd~dF~~vFgms~~eF 50 (68)
T d1qzpa_ 32 RHLSAEDFSRVFAMSPEEF 50 (68)
T ss_dssp GGBCHHHHHHHSSSCHHHH
T ss_pred hhCCHHHHHHHHCcCHHHH
Confidence 7999999999999999998
No 11
>d3kvta_ d.42.1.2 (A:) akv3.1 voltage-gated potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]}
Probab=36.09 E-value=2.3 Score=25.59 Aligned_cols=55 Identities=20% Similarity=0.296 Sum_probs=38.3
Q ss_pred eEEEEeecCcceEEEEEccCCCc-H--HHHHHHHhHHHhcCCcCCCCceeeeCCHHHHHHHHhc
Q 034523 31 HLAVYVGEIEKSRFVVPVSYLKH-P--SFQNLLSQAEEEFGFDHPMGGLTIPCSEKVFMDLTSR 91 (92)
Q Consensus 31 ~~aVyVG~~~~~RfvVp~~~L~h-P--~F~~LL~~aeeEfG~~~~~G~L~iPC~~~~Fe~vl~~ 91 (92)
.+.+=||. ++|.+..+-|.. | .|..+ ++....++.++|.+-|--+...|++||+-
T Consensus 3 rI~LNVGG---~~F~t~~~tL~~~~~s~l~~~---~~~~~~~~~~~~~~fiDRdp~~F~~IL~y 60 (103)
T d3kvta_ 3 RVIINVGG---IRHETYKATLKKIPATRLSRL---TEGMLNYDPVLNEYFFDRHPGVFAQIINY 60 (103)
T ss_dssp EEEEEETT---EEEEEEHHHHTTSCSSTTTTC---CTTSTTEETTTTEEEECSCTTTHHHHHHH
T ss_pred EEEEEECC---EEEEEeHHHHhhCccchhHHH---HcCCCccCCCCCcEEecCCHHHHHHHHHH
Confidence 35566886 899998887763 4 33322 23334455556899999999999999874
No 12
>d1y74b1 a.194.1.1 (B:83-132) Peripheral plasma membrane protein cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.91 E-value=6.4 Score=21.56 Aligned_cols=20 Identities=35% Similarity=0.595 Sum_probs=14.9
Q ss_pred cCCCcHHHHHHHHh----HHHhcC
Q 034523 49 SYLKHPSFQNLLSQ----AEEEFG 68 (92)
Q Consensus 49 ~~L~hP~F~~LL~~----aeeEfG 68 (92)
..|+.|.|++||.- |.+-||
T Consensus 26 ~lL~~PH~~aLL~aHD~VA~k~Y~ 49 (50)
T d1y74b1 26 RILTQPHFMALLQTHDVVAHEVYS 49 (50)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhCHHHHHHHHHHHHHHHHhcc
Confidence 35788999999974 556665
No 13
>d1ujsa_ a.14.1.1 (A:) Actin-binding LIM protein homologue KIAA0843 {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.83 E-value=6.2 Score=23.92 Aligned_cols=20 Identities=20% Similarity=0.345 Sum_probs=18.5
Q ss_pred cCCCcHHHHHHHHhHHHhcC
Q 034523 49 SYLKHPSFQNLLSQAEEEFG 68 (92)
Q Consensus 49 ~~L~hP~F~~LL~~aeeEfG 68 (92)
.||+.-.|++++.++.+||-
T Consensus 46 ~YLSdedF~~vFgMsr~eF~ 65 (88)
T d1ujsa_ 46 RHLSQEEFYQVFGMTISEFD 65 (88)
T ss_dssp GGSCTTHHHHHHSSCHHHHT
T ss_pred hcCCHHHHHHHHCcCHHHHH
Confidence 69999999999999999984
No 14
>d1qusa_ d.2.1.6 (A:) 36 kDa soluble lytic transglycosylase, SLT35 {Escherichia coli [TaxId: 562]}
Probab=32.83 E-value=13 Score=26.81 Aligned_cols=24 Identities=21% Similarity=0.526 Sum_probs=21.8
Q ss_pred ccCCCcHHHHHHHHhHHHhcCCcC
Q 034523 48 VSYLKHPSFQNLLSQAEEEFGFDH 71 (92)
Q Consensus 48 ~~~L~hP~F~~LL~~aeeEfG~~~ 71 (92)
-+|.+||.++++++...+++||+.
T Consensus 13 ~dya~~p~v~~Fi~~la~~~G~s~ 36 (322)
T d1qusa_ 13 GDFANNPNAQQFIDKMVNKHGFDR 36 (322)
T ss_dssp STTTTCHHHHHHHHHHHHHHCCCH
T ss_pred CCcccCHHHHHHHHHHHHHhCCCH
Confidence 479999999999999999999975
No 15
>d1yu8x1 a.14.1.1 (X:42-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=31.72 E-value=7.8 Score=19.62 Aligned_cols=17 Identities=18% Similarity=0.473 Sum_probs=14.3
Q ss_pred CCcHHHHHHHHhHHHhc
Q 034523 51 LKHPSFQNLLSQAEEEF 67 (92)
Q Consensus 51 L~hP~F~~LL~~aeeEf 67 (92)
|+.-.|++++.++.+||
T Consensus 1 Lsd~dF~~vfgmsr~eF 17 (35)
T d1yu8x1 1 LSDEDFKAVFGMTRSAF 17 (35)
T ss_dssp SCHHHHHHHHSSCHHHH
T ss_pred CCHHHHHHHHCCCHHHH
Confidence 56678999999999887
No 16
>d2r85a1 c.30.1.8 (A:1-99) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Pyrococcus furiosus [TaxId: 2261]}
Probab=28.87 E-value=0.42 Score=30.09 Aligned_cols=24 Identities=25% Similarity=0.353 Sum_probs=16.7
Q ss_pred cCCCCCeEEEEeecCcceEEEEEc
Q 034523 25 STVPKGHLAVYVGEIEKSRFVVPV 48 (92)
Q Consensus 25 ~~vpkG~~aVyVG~~~~~RfvVp~ 48 (92)
--+|.|.|++|+|-+.-+.|.||+
T Consensus 65 I~IPhgSfv~Y~G~d~ie~~~VP~ 88 (99)
T d2r85a1 65 VVVPTGSFVAHLGIELVENMKVPY 88 (99)
T ss_dssp EECCCTTHHHHHCHHHHHTCCSCB
T ss_pred EEecCCCEEEEEcHHHHhcCCCCc
Confidence 458999999999962223366654
No 17
>d2hyja2 a.121.1.1 (A:83-200) Putative transcriptional regulator SCO4940 {Streptomyces coelicolor [TaxId: 1902]}
Probab=25.47 E-value=19 Score=20.73 Aligned_cols=32 Identities=13% Similarity=0.067 Sum_probs=26.5
Q ss_pred hhHHHHHHHHHHhhhhccccCCCCCeEEEEee
Q 034523 6 LRIVNAKQALRRALMVSEASTVPKGHLAVYVG 37 (92)
Q Consensus 6 ~~~~~~k~~lkr~~~~~k~~~vpkG~~aVyVG 37 (92)
+++-+++..+..|..+.+....|.||+.+-.+
T Consensus 2 ~~~~rL~a~~~~~~~~~~~~~~~~GC~~~~~~ 33 (118)
T d2hyja2 2 PGLRRLRAVCANSVGYLEEPLLPGGCLLTAAL 33 (118)
T ss_dssp TTHHHHHHHHHHHHHHHHSCSSTTSCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCChhHhHH
Confidence 46778899999998887788899999977664
No 18
>d1b0aa2 c.58.1.2 (A:2-122) Tetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}
Probab=25.08 E-value=66 Score=19.14 Aligned_cols=53 Identities=25% Similarity=0.335 Sum_probs=36.8
Q ss_pred CCCCCeEEEEeecCcceEEEEEccCCCcHHHHHHHHhHHHhcCCcCCCCceeee--CCHHHHHHHHhc
Q 034523 26 TVPKGHLAVYVGEIEKSRFVVPVSYLKHPSFQNLLSQAEEEFGFDHPMGGLTIP--CSEKVFMDLTSR 91 (92)
Q Consensus 26 ~vpkG~~aVyVG~~~~~RfvVp~~~L~hP~F~~LL~~aeeEfG~~~~~G~L~iP--C~~~~Fe~vl~~ 91 (92)
..+-+...|+||+ +. ..-.....-.++.++.|+... .+.+| |+..++...+..
T Consensus 30 ~~~P~LavI~vg~-d~----------aS~~Yv~~k~k~a~~lGi~~~--~~~l~~~~t~~~l~~~I~~ 84 (121)
T d1b0aa2 30 LRAPGLAVVLVGS-NP----------ASQIYVASKRKACEEVGFVSR--SYDLPETTSEAELLELIDT 84 (121)
T ss_dssp CCCCEEEEEEESC-CH----------HHHHHHHHHHHHHHHHTCEEC--CEEECTTCCHHHHHHHHHH
T ss_pred CCCceEEEEEeCC-Ch----------hHHHHHHHHHHHHHhhcccee--eeeccccccHHHHHHHHHH
Confidence 3455888999997 21 011356677788999999865 57776 777888877653
No 19
>d1t1da_ d.42.1.2 (A:) Shaker potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]}
Probab=25.02 E-value=7.5 Score=23.16 Aligned_cols=54 Identities=15% Similarity=0.130 Sum_probs=35.8
Q ss_pred EEEEeecCcceEEEEEccCCCc-H--HHHHHHHhHHHhcCCcCCCCceeeeCCHHHHHHHHhc
Q 034523 32 LAVYVGEIEKSRFVVPVSYLKH-P--SFQNLLSQAEEEFGFDHPMGGLTIPCSEKVFMDLTSR 91 (92)
Q Consensus 32 ~aVyVG~~~~~RfvVp~~~L~h-P--~F~~LL~~aeeEfG~~~~~G~L~iPC~~~~Fe~vl~~ 91 (92)
+.+-||. ++|.+..+-|.. | .+..|.. ..-.++.++|.+-|--|...|++||+-
T Consensus 3 I~LNVGG---~~f~t~~~tL~~~p~s~l~~l~~---~~~~~~~~~g~~FiDRdp~~F~~IL~f 59 (100)
T d1t1da_ 3 VVINVSG---LRFETQLKTLNQFPDTLLGNPQK---RNRYYDPLRNEYFFDRNRPSFDAILYF 59 (100)
T ss_dssp EEEEETT---EEEEEEHHHHHTSTTSTTTCHHH---HGGGEETTTTEEEECSCSTTHHHHHHH
T ss_pred EEEEECC---EEEEEeHHHHhhCCCchhHHHHh---CCCcCCCCCCeEEEecCHHHHHHHHHH
Confidence 4566886 899998776643 3 3333332 122234455899999999999999863
No 20
>d1a4ia2 c.58.1.2 (A:2-126) Tetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.78 E-value=68 Score=19.19 Aligned_cols=53 Identities=19% Similarity=0.298 Sum_probs=34.4
Q ss_pred CCCCCeEEEEeecCcceEEEEEccCCCcHHHHHHHHhHHHhcCCcCCCCceeee--CCHHHHHHHHhc
Q 034523 26 TVPKGHLAVYVGEIEKSRFVVPVSYLKHPSFQNLLSQAEEEFGFDHPMGGLTIP--CSEKVFMDLTSR 91 (92)
Q Consensus 26 ~vpkG~~aVyVG~~~~~RfvVp~~~L~hP~F~~LL~~aeeEfG~~~~~G~L~iP--C~~~~Fe~vl~~ 91 (92)
.++-+...|+||+ +. ..-.....-.++.++.|.... .+.+| ++...+...+..
T Consensus 32 g~~P~LavIlvg~-d~----------aS~~Yv~~k~k~a~~~Gi~~~--~~~l~~~~~e~el~~~I~~ 86 (125)
T d1a4ia2 32 GFTPRLAILQVGN-RD----------DSNLYINVKLKAAEEIGIKAT--HIKLPRTTTESEVMKYITS 86 (125)
T ss_dssp TCCCEEEEEEESC-CH----------HHHHHHHHHHHHHHHHTCEEE--EEEECTTCCHHHHHHHHHH
T ss_pred CCCceEEEEEcCC-Ch----------hHHHHHHHHHHHHHhccceEE--EEecCcchhHHHHHHHHHH
Confidence 4455688899997 21 112355667788889998764 67777 555666666543
No 21
>d2odgc1 a.140.1.1 (C:2-47) Inner nuclear membrane protein emerin {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.96 E-value=23 Score=18.91 Aligned_cols=22 Identities=23% Similarity=0.475 Sum_probs=16.1
Q ss_pred CCCcHHHHHHHHhHHHhcCCcCCCCcee
Q 034523 50 YLKHPSFQNLLSQAEEEFGFDHPMGGLT 77 (92)
Q Consensus 50 ~L~hP~F~~LL~~aeeEfG~~~~~G~L~ 77 (92)
.|+...+..||+ +||..| ||++
T Consensus 5 ~lSd~El~~lL~----~y~I~H--GPvV 26 (46)
T d2odgc1 5 DLSDTELTTLLR----RYNIPH--GPVV 26 (46)
T ss_dssp GSCHHHHHHHHH----HTTCCC--CCCC
T ss_pred hhcHHHHHHHHH----HhCCCC--CCcc
Confidence 456666777775 799998 7875
No 22
>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]}
Probab=23.96 E-value=19 Score=22.39 Aligned_cols=40 Identities=13% Similarity=0.098 Sum_probs=29.5
Q ss_pred EccCCCcHHHHHHHHhHHHhcCCcCCCCceeeeCCHHHHH
Q 034523 47 PVSYLKHPSFQNLLSQAEEEFGFDHPMGGLTIPCSEKVFM 86 (92)
Q Consensus 47 p~~~L~hP~F~~LL~~aeeEfG~~~~~G~L~iPC~~~~Fe 86 (92)
...-|..-.++.|.+.|++.+|-+-.+-.|++|+.....+
T Consensus 109 s~~~l~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~~ 148 (183)
T d1dkgd1 109 APPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQ 148 (183)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHH
Confidence 3444566678888999999999776656799998766544
No 23
>d2c35b2 d.230.1.1 (B:1-77) N-terminal, heterodimerisation domain of RBP7 (RpoE) {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.59 E-value=51 Score=17.98 Aligned_cols=27 Identities=7% Similarity=0.108 Sum_probs=23.2
Q ss_pred eEEEEEccCCCcHHHHHHHHhHHHhcC
Q 034523 42 SRFVVPVSYLKHPSFQNLLSQAEEEFG 68 (92)
Q Consensus 42 ~RfvVp~~~L~hP~F~~LL~~aeeEfG 68 (92)
+...||.++|+.+.-+.|.++..+.|.
T Consensus 9 d~v~i~P~~~~~~~~~~i~~~L~~~~e 35 (77)
T d2c35b2 9 HEILLHPRYFGPNLLNTVKQKLFTEVE 35 (77)
T ss_dssp EEEEECGGGCCSCHHHHHHHHHHHHHT
T ss_pred EEEEECHHHhCccHHHHHHHHHHHHhC
Confidence 567899999999999999998888773
No 24
>d2pbza1 c.30.1.8 (A:4-99) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Thermococcus kodakaraensis [TaxId: 311400]}
Probab=22.82 E-value=0.65 Score=29.04 Aligned_cols=23 Identities=22% Similarity=0.366 Sum_probs=15.5
Q ss_pred cCCCCCeEEEEeecCcceEEEEE
Q 034523 25 STVPKGHLAVYVGEIEKSRFVVP 47 (92)
Q Consensus 25 ~~vpkG~~aVyVG~~~~~RfvVp 47 (92)
--+|.|.|++|+|-+.-+.+.||
T Consensus 60 I~IPhgSfv~Y~G~~~ie~~~VP 82 (96)
T d2pbza1 60 IVVPHGSFVAYLGIEAIEKAKAR 82 (96)
T ss_dssp BCCCBTTHHHHSCHHHHHTCCSC
T ss_pred EEEcCCCEEEEecHHHHhhCCCC
Confidence 44899999999995222334444
No 25
>d1t2da2 d.162.1.1 (A:151-315) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=20.58 E-value=66 Score=19.51 Aligned_cols=32 Identities=19% Similarity=0.235 Sum_probs=20.9
Q ss_pred EEEEeecCcceEEEEEccCCCcHHHHHHHHhHHHh
Q 034523 32 LAVYVGEIEKSRFVVPVSYLKHPSFQNLLSQAEEE 66 (92)
Q Consensus 32 ~aVyVG~~~~~RfvVp~~~L~hP~F~~LL~~aeeE 66 (92)
+||-+|. +.-.=++++. |+ +.=+++|++|++|
T Consensus 126 ~Pv~lg~-~Gv~~i~~l~-L~-~~E~~~L~~s~~~ 157 (165)
T d1t2da2 126 TPVVLGA-NGVEQVIELQ-LN-SEEKAKFDEAIAE 157 (165)
T ss_dssp EEEEEET-TEEEEECCCC-CC-HHHHHHHHHHHHH
T ss_pred eeEEEcC-CceEEEeCCC-CC-HHHHHHHHHHHHH
Confidence 3555576 4455567766 65 6667888888776
Done!