BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034525
MMKECDLNLDGELDHEEFVKFIQKLTSDTFIVVSQGLLITLVVAPTVAMATKRATEGVPH
VGKVVQRVPNSIYASLVTLAVVWFQNSGRQID

High Scoring Gene Products

Symbol, full name Information P value
AT1G64850 protein from Arabidopsis thaliana 1.0e-29
AT4G37445 protein from Arabidopsis thaliana 3.9e-05

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034525
        (92 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2010821 - symbol:AT1G64850 "AT1G64850" species...   329  1.0e-29   1
TAIR|locus:505006567 - symbol:AT4G37445 "AT4G37445" speci...    97  3.9e-05   1


>TAIR|locus:2010821 [details] [associations]
            symbol:AT1G64850 "AT1G64850" species:3702 "Arabidopsis
            thaliana" [GO:0005509 "calcium ion binding" evidence=ISS]
            [GO:0008150 "biological_process" evidence=ND] [GO:0009536 "plastid"
            evidence=IDA] InterPro:IPR002048 InterPro:IPR011992 PROSITE:PS50222
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009536 GO:GO:0005509
            Gene3D:1.10.238.10 EMBL:AC006193 EMBL:AY070488 EMBL:AY101542
            EMBL:AY087031 IPI:IPI00525745 PIR:G96671 RefSeq:NP_564841.1
            UniGene:At.28384 ProteinModelPortal:Q9XIR0 SMR:Q9XIR0 PaxDb:Q9XIR0
            PRIDE:Q9XIR0 EnsemblPlants:AT1G64850.1 GeneID:842793
            KEGG:ath:AT1G64850 TAIR:At1g64850 eggNOG:NOG330029
            HOGENOM:HOG000241000 InParanoid:Q9XIR0 OMA:GPHFDPP PhylomeDB:Q9XIR0
            ProtClustDB:CLSN2689024 Genevestigator:Q9XIR0 Uniprot:Q9XIR0
        Length = 162

 Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
 Identities = 62/83 (74%), Positives = 77/83 (92%)

Query:     1 MMKECDLNLDGELDHEEFVKFIQKLTSDTFIVVSQGLLITLVVAPTVAMATKRATEGVPH 60
             +M +CD+NLDGELD EEFVKFI+++T++TF VVSQGL+I L+VAPTVA+ATK+ATEGVP 
Sbjct:    74 IMTDCDINLDGELDREEFVKFIEQITAETFNVVSQGLIIALIVAPTVAIATKKATEGVPG 133

Query:    61 VGKVVQRVPNSIYASLVTLAVVW 83
             VGKVVQ++P SIYASLVTLAV+W
Sbjct:   134 VGKVVQKLPTSIYASLVTLAVMW 156


>TAIR|locus:505006567 [details] [associations]
            symbol:AT4G37445 "AT4G37445" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002687 IPI:IPI00527227 RefSeq:NP_568026.1
            UniGene:At.31250 EnsemblPlants:AT4G37445.1 GeneID:829899
            KEGG:ath:AT4G37445 OMA:PDVIFVP Uniprot:F4JS23
        Length = 161

 Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
 Identities = 26/74 (35%), Positives = 43/74 (58%)

Query:    10 DGELDHEEFVKFIQKLTSDTFIVVSQGLLITLVVAPTVAMATKRATEGVPHVGKVVQRVP 69
             D E   + F++F+ K    + +      +IT +V+P  AMA KRA E VP + K+++ +P
Sbjct:    80 DEEEKKKLFIEFMSKSVKPSKL--DDVTMITGIVSPPAAMAAKRAGENVPQL-KLIKLIP 136

Query:    70 NSIYASLVT-LAVV 82
             + I+   VT LA+V
Sbjct:   137 DVIFVPTVTILAIV 150


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.135   0.384    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       92        92   0.00091  102 3  11 22  0.45    29
                                                     29  0.40    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  546 (58 KB)
  Total size of DFA:  103 KB (2071 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.41u 0.20s 10.61t   Elapsed:  00:00:00
  Total cpu time:  10.41u 0.20s 10.61t   Elapsed:  00:00:00
  Start:  Thu May  9 18:30:52 2013   End:  Thu May  9 18:30:52 2013

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