Your job contains 1 sequence.
>034541
MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG
HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 034541
(92 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2018324 - symbol:RPS15 "cytosolic ribosomal pr... 470 1.2e-44 1
TAIR|locus:2184772 - symbol:AT5G09510 species:3702 "Arabi... 470 1.2e-44 1
TAIR|locus:2158382 - symbol:AT5G43640 species:3702 "Arabi... 443 8.4e-42 1
TAIR|locus:2184752 - symbol:AT5G09500 species:3702 "Arabi... 440 1.7e-41 1
TAIR|locus:2184847 - symbol:AT5G09490 species:3702 "Arabi... 431 1.6e-40 1
FB|FBgn0034138 - symbol:RpS15 "Ribosomal protein S15" spe... 427 4.2e-40 1
UNIPROTKB|F1NNC3 - symbol:RPS15 "40S ribosomal protein S1... 422 1.4e-39 1
UNIPROTKB|F2Z4M3 - symbol:RPS15 "40S ribosomal protein S1... 422 1.4e-39 1
UNIPROTKB|P62846 - symbol:RPS15 "40S ribosomal protein S1... 422 1.4e-39 1
UNIPROTKB|F1Q1T5 - symbol:RPS15 "Uncharacterized protein"... 422 1.4e-39 1
UNIPROTKB|K7ELC2 - symbol:RPS15 "40S ribosomal protein S1... 422 1.4e-39 1
UNIPROTKB|K7EM56 - symbol:RPS15 "40S ribosomal protein S1... 422 1.4e-39 1
UNIPROTKB|P62841 - symbol:RPS15 "40S ribosomal protein S1... 422 1.4e-39 1
UNIPROTKB|P62844 - symbol:RPS15 "40S ribosomal protein S1... 422 1.4e-39 1
MGI|MGI:98117 - symbol:Rps15 "ribosomal protein S15" spec... 422 1.4e-39 1
RGD|62026 - symbol:Rps15 "ribosomal protein S15" species:... 422 1.4e-39 1
UNIPROTKB|G4MYJ0 - symbol:MGG_10370 "40S ribosomal protei... 421 1.8e-39 1
ZFIN|ZDB-GENE-030131-9092 - symbol:rps15 "ribosomal prote... 421 1.8e-39 1
UNIPROTKB|Q56K10 - symbol:RPS15 "40S ribosomal protein S1... 419 2.9e-39 1
ASPGD|ASPL0000005393 - symbol:AN5997 species:162425 "Emer... 415 7.8e-39 1
RGD|2322072 - symbol:LOC100360484 "ribosomal protein S15-... 402 1.9e-37 1
POMBASE|SPAC1071.07c - symbol:rps1502 "40S ribosomal prot... 397 6.3e-37 1
POMBASE|SPCC1393.03 - symbol:rps1501 "40S ribosomal prote... 397 6.3e-37 1
UNIPROTKB|K7EQJ5 - symbol:RPS15 "40S ribosomal protein S1... 389 4.4e-36 1
WB|WBGene00004484 - symbol:rps-15 species:6239 "Caenorhab... 366 1.2e-33 1
GENEDB_PFALCIPARUM|MAL13P1.92 - symbol:MAL13P1.92 "40S ri... 361 4.1e-33 1
DICTYBASE|DDB_G0285561 - symbol:rps15 "40S ribosomal prot... 347 1.3e-31 1
SGD|S000005400 - symbol:RPS15 "Protein component of the s... 344 2.6e-31 1
TAIR|locus:2161952 - symbol:AT5G63070 species:3702 "Arabi... 299 1.5e-26 1
UNIPROTKB|K7EJ78 - symbol:RPS15 "40S ribosomal protein S1... 230 3.1e-19 1
TIGR_CMR|SO_0235 - symbol:SO_0235 "ribosomal protein S19"... 128 2.0e-08 1
TIGR_CMR|CBU_0242 - symbol:CBU_0242 "ribosomal protein S1... 127 2.6e-08 1
UNIPROTKB|Q9KNY8 - symbol:rpsS "30S ribosomal protein S19... 121 1.1e-07 1
TIGR_CMR|VC_2592 - symbol:VC_2592 "ribosomal protein S19"... 121 1.1e-07 1
UNIPROTKB|P0A7U3 - symbol:rpsS species:83333 "Escherichia... 116 3.8e-07 1
TIGR_CMR|CPS_0869 - symbol:CPS_0869 "ribosomal protein S1... 116 3.8e-07 1
POMBASE|SPAC1751.02c - symbol:rsm19 "mitochondrial riboso... 113 7.8e-07 1
TIGR_CMR|CHY_2305 - symbol:CHY_2305 "ribosomal protein S1... 111 1.3e-06 1
SGD|S000005320 - symbol:RSM19 "Mitochondrial ribosomal pr... 109 2.1e-06 1
TIGR_CMR|NSE_0270 - symbol:NSE_0270 "ribosomal protein S1... 105 5.5e-06 1
TIGR_CMR|ECH_0413 - symbol:ECH_0413 "ribosomal protein S1... 100 1.9e-05 1
TIGR_CMR|APH_0284 - symbol:APH_0284 "ribosomal protein S1... 99 2.4e-05 1
TIGR_CMR|CJE_1871 - symbol:CJE_1871 "ribosomal protein S1... 98 3.0e-05 1
TIGR_CMR|BA_0114 - symbol:BA_0114 "ribosomal protein S19"... 94 8.1e-05 1
TIGR_CMR|GSU_2853 - symbol:GSU_2853 "ribosomal protein S1... 93 0.00010 1
TAIR|locus:2171539 - symbol:RPS19 "ribosomal protein S19"... 95 0.00016 1
TIGR_CMR|DET_0478 - symbol:DET_0478 "ribosomal protein S1... 91 0.00017 1
TIGR_CMR|SPO_0485 - symbol:SPO_0485 "ribosomal protein S1... 87 0.00045 1
>TAIR|locus:2018324 [details] [associations]
symbol:RPS15 "cytosolic ribosomal protein S15"
species:3702 "Arabidopsis thaliana" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS;IDA] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=RCA] InterPro:IPR002222 InterPro:IPR005713
InterPro:IPR020934 InterPro:IPR023575 Pfam:PF00203
PIRSF:PIRSF002144 PRINTS:PR00975 PROSITE:PS00323 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005774
GO:GO:0006412 GO:GO:0003723 EMBL:AC000104 GO:GO:0003735
GO:GO:0022627 Gene3D:3.30.860.10 HAMAP:MF_00531 PANTHER:PTHR11880
SUPFAM:SSF54570 eggNOG:COG0185 EMBL:Z23161 EMBL:Z23162 EMBL:X91962
EMBL:AY048221 EMBL:AY091703 EMBL:Z17791 IPI:IPI00537286 PIR:S43412
PIR:S71259 RefSeq:NP_171923.1 UniGene:At.23118
ProteinModelPortal:Q08112 SMR:Q08112 STRING:Q08112 PaxDb:Q08112
PRIDE:Q08112 ProMEX:Q08112 EnsemblPlants:AT1G04270.1 GeneID:839564
KEGG:ath:AT1G04270 GeneFarm:779 TAIR:At1g04270 HOGENOM:HOG000111561
InParanoid:Q08112 KO:K02958 OMA:THSSRFV PhylomeDB:Q08112
ProtClustDB:CLSN2681780 Genevestigator:Q08112 TIGRFAMs:TIGR01025
Uniprot:Q08112
Length = 152
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 90/92 (97%), Positives = 91/92 (98%)
Query: 1 MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 60
MALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG
Sbjct: 61 MALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120
Query: 61 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 92
HYLAEFSISYKPVKHGRPG+GATHSSRFIPLK
Sbjct: 121 HYLAEFSISYKPVKHGRPGVGATHSSRFIPLK 152
>TAIR|locus:2184772 [details] [associations]
symbol:AT5G09510 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=ISS;IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=RCA] [GO:0001510 "RNA methylation" evidence=RCA]
InterPro:IPR002222 InterPro:IPR005713 InterPro:IPR020934
InterPro:IPR023575 Pfam:PF00203 PIRSF:PIRSF002144 PRINTS:PR00975
PROSITE:PS00323 GO:GO:0009506 GO:GO:0005774 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 GO:GO:0006412 EMBL:AL391712
GO:GO:0003723 GO:GO:0003735 GO:GO:0022627 Gene3D:3.30.860.10
HAMAP:MF_00531 PANTHER:PTHR11880 SUPFAM:SSF54570
HOGENOM:HOG000111561 KO:K02958 ProtClustDB:CLSN2681780
TIGRFAMs:TIGR01025 EMBL:AY050966 EMBL:AY096616 EMBL:AY085630
IPI:IPI00546532 RefSeq:NP_196513.1 UniGene:At.10062
ProteinModelPortal:Q9FY64 SMR:Q9FY64 STRING:Q9FY64 PRIDE:Q9FY64
EnsemblPlants:AT5G09510.1 GeneID:830810 KEGG:ath:AT5G09510
GeneFarm:785 TAIR:At5g09510 InParanoid:Q9FY64 OMA:TRKEVKH
PhylomeDB:Q9FY64 Genevestigator:Q9FY64 GermOnline:AT5G09510
Uniprot:Q9FY64
Length = 152
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 90/92 (97%), Positives = 91/92 (98%)
Query: 1 MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 60
MALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG
Sbjct: 61 MALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120
Query: 61 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 92
HYLAEFSISYKPVKHGRPG+GATHSSRFIPLK
Sbjct: 121 HYLAEFSISYKPVKHGRPGVGATHSSRFIPLK 152
>TAIR|locus:2158382 [details] [associations]
symbol:AT5G43640 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=ISS;IDA] InterPro:IPR002222 InterPro:IPR005713
InterPro:IPR020934 InterPro:IPR023575 Pfam:PF00203
PIRSF:PIRSF002144 PRINTS:PR00975 PROSITE:PS00323 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
EMBL:AB016875 GO:GO:0022627 Gene3D:3.30.860.10 HAMAP:MF_00531
PANTHER:PTHR11880 SUPFAM:SSF54570 HOGENOM:HOG000111561 KO:K02958
ProtClustDB:CLSN2681780 TIGRFAMs:TIGR01025 IPI:IPI00517508
RefSeq:NP_199177.1 UniGene:At.55342 ProteinModelPortal:Q9FIX6
SMR:Q9FIX6 STRING:Q9FIX6 PRIDE:Q9FIX6 EnsemblPlants:AT5G43640.1
GeneID:834384 KEGG:ath:AT5G43640 GeneFarm:784 TAIR:At5g43640
InParanoid:Q9FIX6 OMA:ARVRRKF PhylomeDB:Q9FIX6
Genevestigator:Q9FIX6 GermOnline:AT5G43640 Uniprot:Q9FIX6
Length = 149
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 86/92 (93%), Positives = 88/92 (95%)
Query: 1 MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 60
MALIKKLRKAK EAP GEKP VRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG
Sbjct: 58 MALIKKLRKAKMEAPAGEKPASVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 117
Query: 61 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 92
HYLAEFSISYKPVKHGRPG+GAT+SSRFIPLK
Sbjct: 118 HYLAEFSISYKPVKHGRPGVGATNSSRFIPLK 149
>TAIR|locus:2184752 [details] [associations]
symbol:AT5G09500 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=ISS;IDA] [GO:0005794 "Golgi apparatus"
evidence=RCA] InterPro:IPR002222 InterPro:IPR005713
InterPro:IPR020934 InterPro:IPR023575 Pfam:PF00203
PIRSF:PIRSF002144 PRINTS:PR00975 PROSITE:PS00323 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006412 EMBL:AL391712 GO:GO:0003723
GO:GO:0003735 GO:GO:0022627 Gene3D:3.30.860.10 HAMAP:MF_00531
PANTHER:PTHR11880 SUPFAM:SSF54570 eggNOG:COG0185
HOGENOM:HOG000111561 KO:K02958 ProtClustDB:CLSN2681780
TIGRFAMs:TIGR01025 EMBL:BT010135 IPI:IPI00524188 RefSeq:NP_196512.1
UniGene:At.32501 ProteinModelPortal:Q9FY65 SMR:Q9FY65 STRING:Q9FY65
PaxDb:Q9FY65 PRIDE:Q9FY65 EnsemblPlants:AT5G09500.1 GeneID:830809
KEGG:ath:AT5G09500 GeneFarm:786 TAIR:At5g09500 InParanoid:Q9FY65
OMA:MAYEQLM PhylomeDB:Q9FY65 Genevestigator:Q9FY65
GermOnline:AT5G09500 Uniprot:Q9FY65
Length = 150
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 85/92 (92%), Positives = 88/92 (95%)
Query: 1 MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 60
MALIKKLRKAK EAP GEKP VRTHLRNMIIVPEMIGS+IGVYNGKTFNQVEIKPEMIG
Sbjct: 59 MALIKKLRKAKIEAPAGEKPAAVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIKPEMIG 118
Query: 61 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 92
HYLAEFSISYKPVKHGRPG+GAT+SSRFIPLK
Sbjct: 119 HYLAEFSISYKPVKHGRPGVGATNSSRFIPLK 150
>TAIR|locus:2184847 [details] [associations]
symbol:AT5G09490 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=ISS;IDA] InterPro:IPR002222 InterPro:IPR005713
InterPro:IPR020934 InterPro:IPR023575 Pfam:PF00203
PIRSF:PIRSF002144 PRINTS:PR00975 PROSITE:PS00323 EMBL:CP002688
GO:GO:0006412 EMBL:AL391712 GO:GO:0003723 GO:GO:0003735
GO:GO:0022627 Gene3D:3.30.860.10 HAMAP:MF_00531 PANTHER:PTHR11880
SUPFAM:SSF54570 eggNOG:COG0185 KO:K02958 ProtClustDB:CLSN2681780
TIGRFAMs:TIGR01025 EMBL:AY086958 IPI:IPI00518647 RefSeq:NP_196511.1
UniGene:At.32506 ProteinModelPortal:Q9FY66 SMR:Q9FY66 STRING:Q9FY66
PaxDb:Q9FY66 PRIDE:Q9FY66 EnsemblPlants:AT5G09490.1 GeneID:830808
KEGG:ath:AT5G09490 GeneFarm:787 TAIR:At5g09490 InParanoid:Q9FY66
OMA:PEVVRTH PhylomeDB:Q9FY66 Genevestigator:Q9FY66 Uniprot:Q9FY66
Length = 152
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 81/92 (88%), Positives = 88/92 (95%)
Query: 1 MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 60
MALIKKLRKAK +AP GEKPE VRTHLRNM+I+PEMIGSIIGVYNGKTFNQ+EIKPEMIG
Sbjct: 61 MALIKKLRKAKLDAPAGEKPEVVRTHLRNMVIMPEMIGSIIGVYNGKTFNQIEIKPEMIG 120
Query: 61 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 92
HYLAEFSI+YKPV+HG+PG GATHSSRFIPLK
Sbjct: 121 HYLAEFSITYKPVRHGKPGHGATHSSRFIPLK 152
>FB|FBgn0034138 [details] [associations]
symbol:RpS15 "Ribosomal protein S15" species:7227 "Drosophila
melanogaster" [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005811 "lipid particle"
evidence=IDA] [GO:0000022 "mitotic spindle elongation"
evidence=IMP] [GO:0007052 "mitotic spindle organization"
evidence=IMP] InterPro:IPR002222 InterPro:IPR005713
InterPro:IPR020934 InterPro:IPR023575 Pfam:PF00203
PIRSF:PIRSF002144 PRINTS:PR00975 PROSITE:PS00323 EMBL:AE013599
GO:GO:0005811 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0000022 GO:GO:0015935 Gene3D:3.30.860.10 PANTHER:PTHR11880
SUPFAM:SSF54570 KO:K02958 TIGRFAMs:TIGR01025 OMA:VIRTHCR CTD:6209
GeneTree:ENSGT00390000000475 HSSP:P80381 UniGene:Dm.6178
GeneID:36851 KEGG:dme:Dmel_CG8332 FlyBase:FBgn0034138 ChiTaRS:RpS15
GenomeRNAi:36851 NextBio:800713 EMBL:AY070991 RefSeq:NP_611136.1
SMR:Q7JZW2 STRING:Q7JZW2 EnsemblMetazoa:FBtr0087123 UCSC:CG8332-RA
InParanoid:Q7JZW2 Uniprot:Q7JZW2
Length = 148
Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
Identities = 80/92 (86%), Positives = 86/92 (93%)
Query: 1 MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 60
MALIKKLRKAK+EAPP EKPE V+THLRNMIIVPEM GSIIGVYNGK F QVE+KPEMIG
Sbjct: 57 MALIKKLRKAKKEAPPNEKPEIVKTHLRNMIIVPEMTGSIIGVYNGKDFGQVEVKPEMIG 116
Query: 61 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 92
HYL EF+++YKPVKHGRPGIGATHSSRFIPLK
Sbjct: 117 HYLGEFALTYKPVKHGRPGIGATHSSRFIPLK 148
>UNIPROTKB|F1NNC3 [details] [associations]
symbol:RPS15 "40S ribosomal protein S15" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0000056 "ribosomal small subunit
export from nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0042274 "ribosomal small subunit biogenesis"
evidence=IEA] InterPro:IPR002222 InterPro:IPR005713
InterPro:IPR020934 InterPro:IPR023575 Pfam:PF00203
PIRSF:PIRSF002144 PRINTS:PR00975 PROSITE:PS00323 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 GO:GO:0000056 GO:GO:0006364
GO:GO:0042274 GO:GO:0022627 Gene3D:3.30.860.10 PANTHER:PTHR11880
SUPFAM:SSF54570 TIGRFAMs:TIGR01025 OMA:VIRTHCR
GeneTree:ENSGT00390000000475 HAMAP:MF_00531_A EMBL:AADN02058490
IPI:IPI00818890 Ensembl:ENSGALT00000041059 ArrayExpress:F1NNC3
Uniprot:F1NNC3
Length = 153
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 77/91 (84%), Positives = 88/91 (96%)
Query: 2 ALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGH 61
+L+K+LRKAK+EAPP EKPE V+THLR+MII+PEM+GS++GVYNGKTFNQVEIKPEMIGH
Sbjct: 63 SLLKRLRKAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGH 122
Query: 62 YLAEFSISYKPVKHGRPGIGATHSSRFIPLK 92
YL EFSI+YKPVKHGRPGIGATHSSRFIPLK
Sbjct: 123 YLGEFSITYKPVKHGRPGIGATHSSRFIPLK 153
>UNIPROTKB|F2Z4M3 [details] [associations]
symbol:RPS15 "40S ribosomal protein S15" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0000056 "ribosomal small subunit
export from nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0042274 "ribosomal small subunit biogenesis"
evidence=IEA] InterPro:IPR002222 InterPro:IPR005713
InterPro:IPR020934 InterPro:IPR023575 Pfam:PF00203
PIRSF:PIRSF002144 PRINTS:PR00975 PROSITE:PS00323 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 GO:GO:0000056 GO:GO:0006364
GO:GO:0042274 GO:GO:0022627 Gene3D:3.30.860.10 PANTHER:PTHR11880
SUPFAM:SSF54570 TIGRFAMs:TIGR01025 GeneTree:ENSGT00390000000475
IPI:IPI00593718 UniGene:Gga.991 NextBio:20816489 HAMAP:MF_00531_A
EMBL:AADN02058490 ProteinModelPortal:F2Z4M3 PRIDE:F2Z4M3
Ensembl:ENSGALT00000024514 ArrayExpress:F2Z4M3 Uniprot:F2Z4M3
Length = 144
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 77/91 (84%), Positives = 88/91 (96%)
Query: 2 ALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGH 61
+L+K+LRKAK+EAPP EKPE V+THLR+MII+PEM+GS++GVYNGKTFNQVEIKPEMIGH
Sbjct: 54 SLLKRLRKAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGH 113
Query: 62 YLAEFSISYKPVKHGRPGIGATHSSRFIPLK 92
YL EFSI+YKPVKHGRPGIGATHSSRFIPLK
Sbjct: 114 YLGEFSITYKPVKHGRPGIGATHSSRFIPLK 144
>UNIPROTKB|P62846 [details] [associations]
symbol:RPS15 "40S ribosomal protein S15" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=ISS] InterPro:IPR002222 InterPro:IPR005713
InterPro:IPR020934 InterPro:IPR023575 Pfam:PF00203
PIRSF:PIRSF002144 PRINTS:PR00975 PROSITE:PS00323 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 GO:GO:0022627 Gene3D:3.30.860.10
HAMAP:MF_00531 PANTHER:PTHR11880 SUPFAM:SSF54570 eggNOG:COG0185
HOGENOM:HOG000111561 KO:K02958 TIGRFAMs:TIGR01025 CTD:6209
HOVERGEN:HBG000709 OrthoDB:EOG45MN6X EMBL:M33331 EMBL:D10167
IPI:IPI00593718 PIR:JH0510 RefSeq:NP_990793.1 UniGene:Gga.991
ProteinModelPortal:P62846 SMR:P62846 STRING:P62846 PRIDE:P62846
GeneID:396448 KEGG:gga:396448 InParanoid:P62846 NextBio:20816489
ArrayExpress:P62846 Uniprot:P62846
Length = 145
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 77/91 (84%), Positives = 88/91 (96%)
Query: 2 ALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGH 61
+L+K+LRKAK+EAPP EKPE V+THLR+MII+PEM+GS++GVYNGKTFNQVEIKPEMIGH
Sbjct: 55 SLLKRLRKAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGH 114
Query: 62 YLAEFSISYKPVKHGRPGIGATHSSRFIPLK 92
YL EFSI+YKPVKHGRPGIGATHSSRFIPLK
Sbjct: 115 YLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
>UNIPROTKB|F1Q1T5 [details] [associations]
symbol:RPS15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042274 "ribosomal small subunit biogenesis"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0000056 "ribosomal small subunit export from nucleus"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002222 InterPro:IPR005713
InterPro:IPR020934 InterPro:IPR023575 Pfam:PF00203
PIRSF:PIRSF002144 PRINTS:PR00975 PROSITE:PS00323 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 GO:GO:0000056 GO:GO:0006364
GO:GO:0042274 GO:GO:0022627 Gene3D:3.30.860.10 PANTHER:PTHR11880
SUPFAM:SSF54570 OMA:THSSRFV TIGRFAMs:TIGR01025
GeneTree:ENSGT00390000000475 EMBL:AAEX03012649
Ensembl:ENSCAFT00000035630 Uniprot:F1Q1T5
Length = 115
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 77/91 (84%), Positives = 88/91 (96%)
Query: 2 ALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGH 61
+L+K+LRKAK+EAPP EKPE V+THLR+MII+PEM+GS++GVYNGKTFNQVEIKPEMIGH
Sbjct: 25 SLLKRLRKAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGH 84
Query: 62 YLAEFSISYKPVKHGRPGIGATHSSRFIPLK 92
YL EFSI+YKPVKHGRPGIGATHSSRFIPLK
Sbjct: 85 YLGEFSITYKPVKHGRPGIGATHSSRFIPLK 115
>UNIPROTKB|K7ELC2 [details] [associations]
symbol:RPS15 "40S ribosomal protein S15" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0015935 "small ribosomal subunit"
evidence=IEA] InterPro:IPR002222 InterPro:IPR005713
InterPro:IPR020934 InterPro:IPR023575 Pfam:PF00203
PIRSF:PIRSF002144 PRINTS:PR00975 PROSITE:PS00323 EMBL:AC027307
Gene3D:3.30.860.10 PANTHER:PTHR11880 SUPFAM:SSF54570
TIGRFAMs:TIGR01025 HGNC:HGNC:10388 Ensembl:ENST00000593052
HAMAP:MF_00531_A Uniprot:K7ELC2
Length = 152
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 77/91 (84%), Positives = 88/91 (96%)
Query: 2 ALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGH 61
+L+K+LRKAK+EAPP EKPE V+THLR+MII+PEM+GS++GVYNGKTFNQVEIKPEMIGH
Sbjct: 62 SLLKRLRKAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGH 121
Query: 62 YLAEFSISYKPVKHGRPGIGATHSSRFIPLK 92
YL EFSI+YKPVKHGRPGIGATHSSRFIPLK
Sbjct: 122 YLGEFSITYKPVKHGRPGIGATHSSRFIPLK 152
>UNIPROTKB|K7EM56 [details] [associations]
symbol:RPS15 "40S ribosomal protein S15" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0015935 "small ribosomal subunit"
evidence=IEA] InterPro:IPR002222 InterPro:IPR005713
InterPro:IPR020934 InterPro:IPR023575 Pfam:PF00203
PIRSF:PIRSF002144 PRINTS:PR00975 PROSITE:PS00323 EMBL:AC027307
Gene3D:3.30.860.10 PANTHER:PTHR11880 SUPFAM:SSF54570
TIGRFAMs:TIGR01025 HGNC:HGNC:10388 Ensembl:ENST00000585665
Uniprot:K7EM56
Length = 142
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 77/91 (84%), Positives = 88/91 (96%)
Query: 2 ALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGH 61
+L+K+LRKAK+EAPP EKPE V+THLR+MII+PEM+GS++GVYNGKTFNQVEIKPEMIGH
Sbjct: 52 SLLKRLRKAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGH 111
Query: 62 YLAEFSISYKPVKHGRPGIGATHSSRFIPLK 92
YL EFSI+YKPVKHGRPGIGATHSSRFIPLK
Sbjct: 112 YLGEFSITYKPVKHGRPGIGATHSSRFIPLK 142
>UNIPROTKB|P62841 [details] [associations]
symbol:RPS15 "40S ribosomal protein S15" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0006412
"translation" evidence=IC;TAS] [GO:0006364 "rRNA processing"
evidence=IMP] [GO:0042274 "ribosomal small subunit biogenesis"
evidence=IMP] [GO:0003677 "DNA binding" evidence=NAS] [GO:0005634
"nucleus" evidence=NAS] [GO:0000056 "ribosomal small subunit export
from nucleus" evidence=IMP] [GO:0005654 "nucleoplasm" evidence=NAS]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0006414 "translational elongation" evidence=TAS] [GO:0006415
"translational termination" evidence=TAS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR002222 InterPro:IPR005713 InterPro:IPR020934
InterPro:IPR023575 Pfam:PF00203 PIRSF:PIRSF002144 PRINTS:PR00975
PROSITE:PS00323 Reactome:REACT_116125 GO:GO:0005654 GO:GO:0000184
GO:GO:0003677 GO:GO:0006413 GO:GO:0003723 GO:GO:0003735
GO:GO:0000056 GO:GO:0006364 GO:GO:0042274 GO:GO:0006415
GO:GO:0006414 GO:GO:0022627 Reactome:REACT_1762 GO:GO:0006614
GO:GO:0019083 Gene3D:3.30.860.10 HAMAP:MF_00531 PANTHER:PTHR11880
SUPFAM:SSF54570 eggNOG:COG0185 HOGENOM:HOG000111561 KO:K02958
TIGRFAMs:TIGR01025 OMA:VIRTHCR CTD:6209 HOVERGEN:HBG000709
OrthoDB:EOG45MN6X EMBL:J02984 EMBL:M32405 EMBL:AF145025
EMBL:BC064908 EMBL:BC105810 EMBL:BC141832 IPI:IPI00479058
PIR:A35908 RefSeq:NP_001009.1 UniGene:Hs.406683
ProteinModelPortal:P62841 SMR:P62841 IntAct:P62841 STRING:P62841
PhosphoSite:P62841 DMDM:51338641 PaxDb:P62841 PRIDE:P62841
DNASU:6209 Ensembl:ENST00000233609 GeneID:6209 KEGG:hsa:6209
UCSC:uc002lsp.1 GeneCards:GC19P001438 HGNC:HGNC:10388 MIM:180535
neXtProt:NX_P62841 PharmGKB:PA34787 InParanoid:P62841
PhylomeDB:P62841 EvolutionaryTrace:P62841 GenomeRNAi:6209
NextBio:24119 PMAP-CutDB:P62841 Bgee:P62841 CleanEx:HS_RPS15
Genevestigator:P62841 GermOnline:ENSG00000115268 Uniprot:P62841
Length = 145
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 77/91 (84%), Positives = 88/91 (96%)
Query: 2 ALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGH 61
+L+K+LRKAK+EAPP EKPE V+THLR+MII+PEM+GS++GVYNGKTFNQVEIKPEMIGH
Sbjct: 55 SLLKRLRKAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGH 114
Query: 62 YLAEFSISYKPVKHGRPGIGATHSSRFIPLK 92
YL EFSI+YKPVKHGRPGIGATHSSRFIPLK
Sbjct: 115 YLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
>UNIPROTKB|P62844 [details] [associations]
symbol:RPS15 "40S ribosomal protein S15" species:9823 "Sus
scrofa" [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS] [GO:0042274 "ribosomal small subunit biogenesis"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0000056 "ribosomal small subunit export from nucleus"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002222 InterPro:IPR005713
InterPro:IPR020934 InterPro:IPR023575 Pfam:PF00203
PIRSF:PIRSF002144 PRINTS:PR00975 PROSITE:PS00323 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 GO:GO:0000056 GO:GO:0006364
GO:GO:0042274 GO:GO:0022627 Gene3D:3.30.860.10 HAMAP:MF_00531
PANTHER:PTHR11880 SUPFAM:SSF54570 KO:K02958 TIGRFAMs:TIGR01025
OMA:VIRTHCR CTD:6209 GeneTree:ENSGT00390000000475
HOVERGEN:HBG000709 EMBL:F14497 EMBL:AB005624 RefSeq:NP_999499.1
UniGene:Ssc.12962 ProteinModelPortal:P62844 SMR:P62844 PRIDE:P62844
Ensembl:ENSSSCT00000028123 GeneID:397607 KEGG:ssc:397607
Uniprot:P62844
Length = 145
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 77/91 (84%), Positives = 88/91 (96%)
Query: 2 ALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGH 61
+L+K+LRKAK+EAPP EKPE V+THLR+MII+PEM+GS++GVYNGKTFNQVEIKPEMIGH
Sbjct: 55 SLLKRLRKAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGH 114
Query: 62 YLAEFSISYKPVKHGRPGIGATHSSRFIPLK 92
YL EFSI+YKPVKHGRPGIGATHSSRFIPLK
Sbjct: 115 YLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
>MGI|MGI:98117 [details] [associations]
symbol:Rps15 "ribosomal protein S15" species:10090 "Mus
musculus" [GO:0000028 "ribosomal small subunit assembly"
evidence=ISO] [GO:0000056 "ribosomal small subunit export from
nucleus" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=ISO] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0042274 "ribosomal small subunit
biogenesis" evidence=ISO] InterPro:IPR002222 InterPro:IPR005713
InterPro:IPR020934 InterPro:IPR023575 Pfam:PF00203
PIRSF:PIRSF002144 PRINTS:PR00975 PROSITE:PS00323 MGI:MGI:98117
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0000056
GO:GO:0006364 GO:GO:0042274 GO:GO:0022627 Gene3D:3.30.860.10
HAMAP:MF_00531 PANTHER:PTHR11880 SUPFAM:SSF54570 eggNOG:COG0185
HOGENOM:HOG000111561 KO:K02958 TIGRFAMs:TIGR01025 OMA:VIRTHCR
CTD:6209 GeneTree:ENSGT00390000000475 HOVERGEN:HBG000709
OrthoDB:EOG45MN6X EMBL:M33330 EMBL:BC010763 EMBL:BC094409
IPI:IPI00319231 PIR:A34823 RefSeq:NP_033117.1 UniGene:Mm.643
ProteinModelPortal:P62843 SMR:P62843 IntAct:P62843
MINT:MINT-1213111 STRING:P62843 PhosphoSite:P62843 PaxDb:P62843
PRIDE:P62843 Ensembl:ENSMUST00000068408 GeneID:20054 KEGG:mmu:20054
UCSC:uc007gcn.2 InParanoid:P62843 NextBio:297563 Bgee:P62843
CleanEx:MM_RPS15 Genevestigator:P62843
GermOnline:ENSMUSG00000063457 Uniprot:P62843
Length = 145
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 77/91 (84%), Positives = 88/91 (96%)
Query: 2 ALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGH 61
+L+K+LRKAK+EAPP EKPE V+THLR+MII+PEM+GS++GVYNGKTFNQVEIKPEMIGH
Sbjct: 55 SLLKRLRKAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGH 114
Query: 62 YLAEFSISYKPVKHGRPGIGATHSSRFIPLK 92
YL EFSI+YKPVKHGRPGIGATHSSRFIPLK
Sbjct: 115 YLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
>RGD|62026 [details] [associations]
symbol:Rps15 "ribosomal protein S15" species:10116 "Rattus
norvegicus" [GO:0000028 "ribosomal small subunit assembly"
evidence=IMP] [GO:0000056 "ribosomal small subunit export from
nucleus" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IMP]
[GO:0006364 "rRNA processing" evidence=ISO] [GO:0006412
"translation" evidence=IEA] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=ISO;IDA] [GO:0042274 "ribosomal small subunit
biogenesis" evidence=ISO] InterPro:IPR002222 InterPro:IPR005713
InterPro:IPR020934 InterPro:IPR023575 Pfam:PF00203 PIRSF:PIRSF002144
PRINTS:PR00975 PROSITE:PS00323 RGD:62026 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 GO:GO:0000056 GO:GO:0000028 GO:GO:0006364
GO:GO:0022627 Gene3D:3.30.860.10 HAMAP:MF_00531 PANTHER:PTHR11880
SUPFAM:SSF54570 eggNOG:COG0185 HOGENOM:HOG000111561 KO:K02958
TIGRFAMs:TIGR01025 CTD:6209 GeneTree:ENSGT00390000000475
HOVERGEN:HBG000709 OrthoDB:EOG45MN6X EMBL:M19393 EMBL:D11388
IPI:IPI00231692 PIR:S28939 RefSeq:NP_058847.1 UniGene:Rn.3391
ProteinModelPortal:P62845 SMR:P62845 IntAct:P62845 STRING:P62845
PRIDE:P62845 Ensembl:ENSRNOT00000029791 GeneID:29285 KEGG:rno:29285
UCSC:RGD:62026 InParanoid:P62845 NextBio:608669
Genevestigator:P62845 GermOnline:ENSRNOG00000024603 Uniprot:P62845
Length = 145
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 77/91 (84%), Positives = 88/91 (96%)
Query: 2 ALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGH 61
+L+K+LRKAK+EAPP EKPE V+THLR+MII+PEM+GS++GVYNGKTFNQVEIKPEMIGH
Sbjct: 55 SLLKRLRKAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGH 114
Query: 62 YLAEFSISYKPVKHGRPGIGATHSSRFIPLK 92
YL EFSI+YKPVKHGRPGIGATHSSRFIPLK
Sbjct: 115 YLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
>UNIPROTKB|G4MYJ0 [details] [associations]
symbol:MGG_10370 "40S ribosomal protein S15" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR002222 InterPro:IPR005713
InterPro:IPR020934 InterPro:IPR023575 Pfam:PF00203
PIRSF:PIRSF002144 PRINTS:PR00975 PROSITE:PS00323 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 GO:GO:0043581 EMBL:CM001232
GO:GO:0015935 Gene3D:3.30.860.10 PANTHER:PTHR11880 SUPFAM:SSF54570
KO:K02958 TIGRFAMs:TIGR01025 RefSeq:XP_003713417.1
ProteinModelPortal:G4MYJ0 SMR:G4MYJ0 EnsemblFungi:MGG_10370T0
GeneID:2681981 KEGG:mgr:MGG_10370 Uniprot:G4MYJ0
Length = 153
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 78/92 (84%), Positives = 87/92 (94%)
Query: 1 MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 60
M LIKKLRKAK+EA P EKP+ V+THLR+MI+VPEMIGS+IG+Y+GK FNQVEIKPEM+G
Sbjct: 62 MGLIKKLRKAKQEAKPNEKPDLVKTHLRDMIVVPEMIGSVIGIYSGKEFNQVEIKPEMVG 121
Query: 61 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 92
HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 122 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
>ZFIN|ZDB-GENE-030131-9092 [details] [associations]
symbol:rps15 "ribosomal protein S15" species:7955
"Danio rerio" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0009790
"embryo development" evidence=IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] InterPro:IPR002222 InterPro:IPR005713
InterPro:IPR020934 InterPro:IPR023575 Pfam:PF00203
PIRSF:PIRSF002144 PRINTS:PR00975 PROSITE:PS00323
ZFIN:ZDB-GENE-030131-9092 GO:GO:0006412 GO:GO:0003723 GO:GO:0009790
GO:GO:0003735 GO:GO:0015935 Gene3D:3.30.860.10 PANTHER:PTHR11880
SUPFAM:SSF54570 KO:K02958 TIGRFAMs:TIGR01025 OMA:VIRTHCR CTD:6209
GeneTree:ENSGT00390000000475 HOVERGEN:HBG000709 HAMAP:MF_00531_A
EMBL:BX255969 EMBL:BC081516 EMBL:AY561511 IPI:IPI00495374
RefSeq:NP_001001819.1 UniGene:Dr.25264 SMR:Q6Q421 STRING:Q6Q421
Ensembl:ENSDART00000104364 GeneID:337148 KEGG:dre:337148
InParanoid:Q6Q421 NextBio:20812083 Uniprot:Q6Q421
Length = 145
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 76/91 (83%), Positives = 88/91 (96%)
Query: 2 ALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGH 61
+L+K+LRKAK+EAPP EKPE V+THLR+M+I+PEM+GS++GVYNGKTFNQVEIKPEMIGH
Sbjct: 55 SLLKRLRKAKKEAPPMEKPEVVKTHLRDMVILPEMVGSMVGVYNGKTFNQVEIKPEMIGH 114
Query: 62 YLAEFSISYKPVKHGRPGIGATHSSRFIPLK 92
YL EFSI+YKPVKHGRPGIGATHSSRFIPLK
Sbjct: 115 YLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
>UNIPROTKB|Q56K10 [details] [associations]
symbol:RPS15 "40S ribosomal protein S15" species:9913 "Bos
taurus" [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS] [GO:0042274 "ribosomal small subunit biogenesis"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0000056 "ribosomal small subunit export from nucleus"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002222 InterPro:IPR005713
InterPro:IPR020934 InterPro:IPR023575 Pfam:PF00203
PIRSF:PIRSF002144 PRINTS:PR00975 PROSITE:PS00323 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 GO:GO:0000056 GO:GO:0006364
GO:GO:0042274 GO:GO:0022627 Gene3D:3.30.860.10 HAMAP:MF_00531
PANTHER:PTHR11880 SUPFAM:SSF54570 eggNOG:COG0185
HOGENOM:HOG000111561 KO:K02958 TIGRFAMs:TIGR01025 OMA:VIRTHCR
EMBL:AY911317 EMBL:BC102068 IPI:IPI00704074 RefSeq:NP_001019712.1
UniGene:Bt.4832 ProteinModelPortal:Q56K10 SMR:Q56K10 STRING:Q56K10
PRIDE:Q56K10 Ensembl:ENSBTAT00000026278 GeneID:514569
KEGG:bta:514569 CTD:6209 GeneTree:ENSGT00390000000475
HOVERGEN:HBG000709 InParanoid:Q56K10 OrthoDB:EOG45MN6X
NextBio:20871405 Uniprot:Q56K10
Length = 145
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 76/91 (83%), Positives = 88/91 (96%)
Query: 2 ALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGH 61
+L+K+LRKAK++APP EKPE V+THLR+MII+PEM+GS++GVYNGKTFNQVEIKPEMIGH
Sbjct: 55 SLLKRLRKAKKDAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGH 114
Query: 62 YLAEFSISYKPVKHGRPGIGATHSSRFIPLK 92
YL EFSI+YKPVKHGRPGIGATHSSRFIPLK
Sbjct: 115 YLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
>ASPGD|ASPL0000005393 [details] [associations]
symbol:AN5997 species:162425 "Emericella nidulans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0006407 "rRNA export from nucleus" evidence=IEA]
InterPro:IPR002222 InterPro:IPR005713 InterPro:IPR020934
InterPro:IPR023575 Pfam:PF00203 PRINTS:PR00975 PROSITE:PS00323
GO:GO:0006412 GO:GO:0003723 EMBL:BN001301 GO:GO:0003735
GO:GO:0015935 Gene3D:3.30.860.10 PANTHER:PTHR11880 SUPFAM:SSF54570
HOGENOM:HOG000111561 TIGRFAMs:TIGR01025 OMA:VIRTHCR
EnsemblFungi:CADANIAT00007021 Uniprot:C8V349
Length = 182
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 75/92 (81%), Positives = 86/92 (93%)
Query: 1 MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 60
M LIKKLRKAK+EA P EKP+ V+THLR+MI+VPEMIGS+IG+Y+GK FNQ+E+KPEM+G
Sbjct: 91 MGLIKKLRKAKQEAKPNEKPDLVKTHLRDMIVVPEMIGSVIGIYSGKEFNQIEVKPEMVG 150
Query: 61 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 92
HYL EFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 151 HYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 182
>RGD|2322072 [details] [associations]
symbol:LOC100360484 "ribosomal protein S15-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA]
InterPro:IPR002222 InterPro:IPR005713 InterPro:IPR023575
Pfam:PF00203 PIRSF:PIRSF002144 PRINTS:PR00975 RGD:2322072
GO:GO:0006412 GO:GO:0003735 GO:GO:0015935 Gene3D:3.30.860.10
PANTHER:PTHR11880 SUPFAM:SSF54570 TIGRFAMs:TIGR01025
GeneTree:ENSGT00390000000475 IPI:IPI00947781
Ensembl:ENSRNOT00000067441 UCSC:RGD:2322072 OrthoDB:EOG4HMJBW
Uniprot:D3ZAK6
Length = 144
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 74/91 (81%), Positives = 86/91 (94%)
Query: 2 ALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGH 61
+L+K+L+KAK+EAPP EKPE V+THLR+MII+PEM+GS++GVYN KTFNQVEIKPEMIGH
Sbjct: 54 SLLKRLKKAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMMGVYNRKTFNQVEIKPEMIGH 113
Query: 62 YLAEFSISYKPVKHGRPGIGATHSSRFIPLK 92
YL EFSI+YKPVKHG PGIGATHSSRFIPLK
Sbjct: 114 YLGEFSITYKPVKHGLPGIGATHSSRFIPLK 144
>POMBASE|SPAC1071.07c [details] [associations]
symbol:rps1502 "40S ribosomal protein S15 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000056 "ribosomal
small subunit export from nucleus" evidence=ISO] [GO:0002181
"cytoplasmic translation" evidence=NAS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0006412 "translation" evidence=ISO]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=ISO]
InterPro:IPR002222 InterPro:IPR005713 InterPro:IPR020934
InterPro:IPR023575 Pfam:PF00203 PIRSF:PIRSF002144 PRINTS:PR00975
PROSITE:PS00323 PomBase:SPAC1071.07c EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0003723 GO:GO:0003735 GO:GO:0002181
GO:GO:0000056 GO:GO:0022627 Gene3D:3.30.860.10 HAMAP:MF_00531
PANTHER:PTHR11880 SUPFAM:SSF54570 eggNOG:COG0185
HOGENOM:HOG000111561 KO:K02958 TIGRFAMs:TIGR01025 OrthoDB:EOG4HHSBV
PIR:T37489 RefSeq:NP_594357.1 ProteinModelPortal:Q9UTQ6 SMR:Q9UTQ6
STRING:Q9UTQ6 PRIDE:Q9UTQ6 EnsemblFungi:SPAC1071.07c.1
GeneID:2542912 KEGG:spo:SPAC1071.07c OMA:VIRTHCR NextBio:20803950
Uniprot:Q9UTQ6
Length = 154
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 72/89 (80%), Positives = 81/89 (91%)
Query: 4 IKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYL 63
I+KLRKAK EAP EKP V+THLRNMII+PEM+GS++G+YNGK FNQVEI+PEMIGHYL
Sbjct: 66 IRKLRKAKSEAPLNEKPATVKTHLRNMIILPEMVGSVVGIYNGKLFNQVEIRPEMIGHYL 125
Query: 64 AEFSISYKPVKHGRPGIGATHSSRFIPLK 92
EFSI+YKP KHGRPGIGATHSSRFIPLK
Sbjct: 126 GEFSITYKPTKHGRPGIGATHSSRFIPLK 154
>POMBASE|SPCC1393.03 [details] [associations]
symbol:rps1501 "40S ribosomal protein S15 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000056 "ribosomal
small subunit export from nucleus" evidence=ISO] [GO:0002181
"cytoplasmic translation" evidence=NAS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0006412 "translation" evidence=ISO]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=ISO]
InterPro:IPR002222 InterPro:IPR005713 InterPro:IPR020934
InterPro:IPR023575 Pfam:PF00203 PIRSF:PIRSF002144 PRINTS:PR00975
PROSITE:PS00323 PomBase:SPCC1393.03 GO:GO:0005730 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003723 GO:GO:0003735 GO:GO:0002181
GO:GO:0000056 GO:GO:0022627 Gene3D:3.30.860.10 HAMAP:MF_00531
PANTHER:PTHR11880 SUPFAM:SSF54570 HOGENOM:HOG000111561 KO:K02958
TIGRFAMs:TIGR01025 OMA:TRKEVKH PIR:T40951 RefSeq:NP_587961.1
ProteinModelPortal:O94715 SMR:O94715 STRING:O94715 PRIDE:O94715
EnsemblFungi:SPCC1393.03.1 GeneID:2538892 KEGG:spo:SPCC1393.03
OrthoDB:EOG4HHSBV NextBio:20800071 Uniprot:O94715
Length = 153
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 72/89 (80%), Positives = 81/89 (91%)
Query: 4 IKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYL 63
I+KLRKAK EAP EKP V+THLRNMII+PEM+GS++G+YNGK FNQVEI+PEMIGHYL
Sbjct: 65 IRKLRKAKTEAPLNEKPATVKTHLRNMIILPEMVGSVVGIYNGKLFNQVEIRPEMIGHYL 124
Query: 64 AEFSISYKPVKHGRPGIGATHSSRFIPLK 92
EFSI+YKP KHGRPGIGATHSSRFIPLK
Sbjct: 125 GEFSITYKPTKHGRPGIGATHSSRFIPLK 153
>UNIPROTKB|K7EQJ5 [details] [associations]
symbol:RPS15 "40S ribosomal protein S15" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] InterPro:IPR002222
InterPro:IPR005713 InterPro:IPR023575 Pfam:PF00203
PIRSF:PIRSF002144 EMBL:AC027307 Gene3D:3.30.860.10
PANTHER:PTHR11880 SUPFAM:SSF54570 TIGRFAMs:TIGR01025
HGNC:HGNC:10388 Ensembl:ENST00000589656 Uniprot:K7EQJ5
Length = 140
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 73/91 (80%), Positives = 84/91 (92%)
Query: 2 ALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGH 61
+L+K+LRKAK+EAPP EKPE V+THLR+MII+PEM+GS++GVYNGKTFNQ PEMIGH
Sbjct: 54 SLLKRLRKAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQ----PEMIGH 109
Query: 62 YLAEFSISYKPVKHGRPGIGATHSSRFIPLK 92
YL EFSI+YKPVKHGRPGIGATHSSRFIPLK
Sbjct: 110 YLGEFSITYKPVKHGRPGIGATHSSRFIPLK 140
>WB|WBGene00004484 [details] [associations]
symbol:rps-15 species:6239 "Caenorhabditis elegans"
[GO:0006412 "translation" evidence=IEA;IMP] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0009408 "response to heat" evidence=IMP] [GO:0006915 "apoptotic
process" evidence=IMP] InterPro:IPR002222 InterPro:IPR005713
InterPro:IPR020934 InterPro:IPR023575 Pfam:PF00203
PIRSF:PIRSF002144 PRINTS:PR00975 PROSITE:PS00323 GO:GO:0008340
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0006915
GO:GO:0002119 GO:GO:0006412 GO:GO:0000003 GO:GO:0009408
GO:GO:0003723 GO:GO:0003735 GO:GO:0015935 Gene3D:3.30.860.10
HAMAP:MF_00531 PANTHER:PTHR11880 SUPFAM:SSF54570 eggNOG:COG0185
HOGENOM:HOG000111561 KO:K02958 TIGRFAMs:TIGR01025 OMA:VIRTHCR
GeneTree:ENSGT00390000000475 EMBL:Z81077 PIR:T21828
RefSeq:NP_492384.1 ProteinModelPortal:Q9XVP0 SMR:Q9XVP0
IntAct:Q9XVP0 STRING:Q9XVP0 PaxDb:Q9XVP0 PRIDE:Q9XVP0
EnsemblMetazoa:F36A2.6.1 EnsemblMetazoa:F36A2.6.2 GeneID:172693
KEGG:cel:CELE_F36A2.6 UCSC:F36A2.6.2 CTD:172693 WormBase:F36A2.6
InParanoid:Q9XVP0 NextBio:876613 Uniprot:Q9XVP0
Length = 151
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 68/92 (73%), Positives = 80/92 (86%)
Query: 1 MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 60
+ALI K++KAK+ A EKP V+THLR+MII+PE++G +IG+YNGK FNQ EIKPEMIG
Sbjct: 60 LALIAKVQKAKKAAGVLEKPATVKTHLRDMIILPELVGGVIGIYNGKVFNQTEIKPEMIG 119
Query: 61 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 92
YL EF+ISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 120 FYLGEFAISYKPVKHGRPGIGATHSSRFIPLK 151
>GENEDB_PFALCIPARUM|MAL13P1.92 [details] [associations]
symbol:MAL13P1.92 "40S ribosomal protein S15,
putative" species:5833 "Plasmodium falciparum" [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS]
InterPro:IPR002222 InterPro:IPR005713 InterPro:IPR020934
InterPro:IPR023575 Pfam:PF00203 PIRSF:PIRSF002144 PRINTS:PR00975
PROSITE:PS00323 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
EMBL:AL844509 GO:GO:0015935 Gene3D:3.30.860.10 PANTHER:PTHR11880
SUPFAM:SSF54570 HOGENOM:HOG000111561 KO:K02958 TIGRFAMs:TIGR01025
ProtClustDB:PTZ00096 RefSeq:XP_002809019.1
ProteinModelPortal:C0H5C2 EnsemblProtists:MAL13P1.92:mRNA
GeneID:813983 KEGG:pfa:MAL13P1.92 EuPathDB:PlasmoDB:PF3D7_1317800
Uniprot:C0H5C2
Length = 145
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 64/91 (70%), Positives = 78/91 (85%)
Query: 2 ALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGH 61
+L+KK+RK+K+ PGEKP PV THLRNM I+PEM+GSI+ V+NGK + VEIKPEMIG+
Sbjct: 55 SLLKKIRKSKKNCEPGEKPNPVPTHLRNMTIIPEMVGSIVAVHNGKQYTNVEIKPEMIGY 114
Query: 62 YLAEFSISYKPVKHGRPGIGATHSSRFIPLK 92
YL EFSI+YK +HG+PGIGATHSSRFIPLK
Sbjct: 115 YLGEFSITYKHTRHGKPGIGATHSSRFIPLK 145
>DICTYBASE|DDB_G0285561 [details] [associations]
symbol:rps15 "40S ribosomal protein S15"
species:44689 "Dictyostelium discoideum" [GO:0005515 "protein
binding" evidence=IPI] [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR002222 InterPro:IPR005713 InterPro:IPR023575
Pfam:PF00203 PIRSF:PIRSF002144 PRINTS:PR00975 PROSITE:PS00323
dictyBase:DDB_G0285561 GenomeReviews:CM000153_GR GO:GO:0006412
EMBL:AAFI02000079 GO:GO:0003735 GO:GO:0015935 Gene3D:3.30.860.10
HAMAP:MF_00531 PANTHER:PTHR11880 SUPFAM:SSF54570 eggNOG:COG0185
KO:K02958 TIGRFAMs:TIGR01025 OMA:VIRTHCR RefSeq:XP_638126.1
HSSP:P80381 ProteinModelPortal:Q54N17 SMR:Q54N17 STRING:Q54N17
PRIDE:Q54N17 EnsemblProtists:DDB0231047 GeneID:8625175
KEGG:ddi:DDB_G0285561 ProtClustDB:PTZ00096 Uniprot:Q54N17
Length = 144
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 65/90 (72%), Positives = 74/90 (82%)
Query: 4 IKKLRKAKREAPP-GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHY 62
+KK R +K GEKP V+TH RN++IVPEMIGS+IG+YNGK FNQVE+KPEMIGHY
Sbjct: 55 LKKCRASKAAVTQVGEKPALVKTHARNILIVPEMIGSVIGIYNGKVFNQVEVKPEMIGHY 114
Query: 63 LAEFSISYKPVKHGRPGIGATHSSRFIPLK 92
EFS+SYK V HGRPGIGATHSSRFIPLK
Sbjct: 115 TGEFSLSYKSVNHGRPGIGATHSSRFIPLK 144
>SGD|S000005400 [details] [associations]
symbol:RPS15 "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0003735
"structural constituent of ribosome" evidence=IEA;NAS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=NAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006407 "rRNA export from nucleus" evidence=IMP]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0002181 "cytoplasmic translation"
evidence=NAS] InterPro:IPR002222 InterPro:IPR005713
InterPro:IPR020934 InterPro:IPR023575 Pfam:PF00203
PIRSF:PIRSF002144 PRINTS:PR00975 PROSITE:PS00323 SGD:S000005400
EMBL:BK006948 GO:GO:0003723 GO:GO:0003735 GO:GO:0002181 PDB:1S1H
PDBsum:1S1H GO:GO:0022627 PDB:3IZB PDB:3O2Z PDB:3O30 PDB:3U5C
PDB:3U5G PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30 PDBsum:3U5C
PDBsum:3U5G GO:GO:0006407 Gene3D:3.30.860.10 HAMAP:MF_00531
PANTHER:PTHR11880 SUPFAM:SSF54570 eggNOG:COG0185 PDB:1K5X
PDBsum:1K5X HOGENOM:HOG000111561 KO:K02958 TIGRFAMs:TIGR01025
OrthoDB:EOG4HHSBV OMA:VIRTHCR GeneTree:ENSGT00390000000475
EMBL:D11386 EMBL:D11387 EMBL:Z74782 EMBL:AY558426 PIR:S24053
RefSeq:NP_014602.1 ProteinModelPortal:Q01855 SMR:Q01855
IntAct:Q01855 STRING:Q01855 PaxDb:Q01855 PeptideAtlas:Q01855
EnsemblFungi:YOL040C GeneID:854117 KEGG:sce:YOL040C CYGD:YOL040c
EvolutionaryTrace:Q01855 NextBio:975816 Genevestigator:Q01855
GermOnline:YOL040C Uniprot:Q01855
Length = 142
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 66/89 (74%), Positives = 76/89 (85%)
Query: 4 IKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYL 63
+KKLR AK AP EKP PVRTH+RNMIIVPEMIGS++G+YNGK FNQVEI+PEM+GHYL
Sbjct: 57 MKKLRAAKLAAPENEKPAPVRTHMRNMIIVPEMIGSVVGIYNGKAFNQVEIRPEMLGHYL 116
Query: 64 AEFSISYKPVKHGRPGIGATHSSRFIPLK 92
EFSI+Y PV+HGR G AT +SRFIPLK
Sbjct: 117 GEFSITYTPVRHGRAG--AT-TSRFIPLK 142
>TAIR|locus:2161952 [details] [associations]
symbol:AT5G63070 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IDA] InterPro:IPR002222 InterPro:IPR005713
InterPro:IPR020934 InterPro:IPR023575 Pfam:PF00203
PIRSF:PIRSF002144 PRINTS:PR00975 PROSITE:PS00323 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
EMBL:AB008265 GO:GO:0022627 Gene3D:3.30.860.10 HAMAP:MF_00531
PANTHER:PTHR11880 SUPFAM:SSF54570 eggNOG:COG0185
HOGENOM:HOG000111561 KO:K02958 ProtClustDB:CLSN2681780
TIGRFAMs:TIGR01025 EMBL:DQ056736 IPI:IPI00535435 RefSeq:NP_201112.1
UniGene:At.66664 ProteinModelPortal:Q9FML6 SMR:Q9FML6 STRING:Q9FML6
PaxDb:Q9FML6 PRIDE:Q9FML6 EnsemblPlants:AT5G63070.1 GeneID:836427
KEGG:ath:AT5G63070 TAIR:At5g63070 InParanoid:Q9FML6 OMA:KFNEIVI
PhylomeDB:Q9FML6 Genevestigator:Q9FML6 GermOnline:AT5G63070
Uniprot:Q9FML6
Length = 160
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 63/98 (64%), Positives = 76/98 (77%)
Query: 1 MALIKKLRKAKREAPPGEK--PEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEM 58
+ LIKKLR+AK+EA K PE V+THLRNMIIVPEMIGS++GV+NGK FN++ IKPEM
Sbjct: 63 LILIKKLRRAKKEASDENKMKPEVVKTHLRNMIIVPEMIGSVVGVHNGKKFNEIVIKPEM 122
Query: 59 IGHYLAEFSISYKPVKHGRPGI-GAT---HSSRFIPLK 92
IGHYLAEFS++ K V H RP I G S+RFIPL+
Sbjct: 123 IGHYLAEFSMTCKKVNHHRPRICGCCCFRRSTRFIPLR 160
>UNIPROTKB|K7EJ78 [details] [associations]
symbol:RPS15 "40S ribosomal protein S15" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] InterPro:IPR002222
InterPro:IPR005713 InterPro:IPR023575 Pfam:PF00203
PIRSF:PIRSF002144 PRINTS:PR00975 EMBL:AC027307 Gene3D:3.30.860.10
PANTHER:PTHR11880 SUPFAM:SSF54570 TIGRFAMs:TIGR01025
HGNC:HGNC:10388 Ensembl:ENST00000586096 Uniprot:K7EJ78
Length = 129
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 42/54 (77%), Positives = 52/54 (96%)
Query: 2 ALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIK 55
+L+K+LRKAK+EAPP EKPE V+THLR+MII+PEM+GS++GVYNGKTFNQVEIK
Sbjct: 55 SLLKRLRKAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIK 108
>TIGR_CMR|SO_0235 [details] [associations]
symbol:SO_0235 "ribosomal protein S19" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR002222 InterPro:IPR005732 InterPro:IPR020934
InterPro:IPR023575 Pfam:PF00203 PIRSF:PIRSF002144 PRINTS:PR00975
PROSITE:PS00323 GO:GO:0006412 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0003735 GO:GO:0019843 GO:GO:0015935
Gene3D:3.30.860.10 HAMAP:MF_00531 PANTHER:PTHR11880 SUPFAM:SSF54570
TIGRFAMs:TIGR01050 eggNOG:COG0185 KO:K02965 HOGENOM:HOG000111560
OMA:RVIKTWS ProtClustDB:PRK00357 RefSeq:NP_715875.1
ProteinModelPortal:Q8EK64 SMR:Q8EK64 GeneID:1168118
KEGG:son:SO_0235 PATRIC:23520163 Uniprot:Q8EK64
Length = 92
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 31/65 (47%), Positives = 42/65 (64%)
Query: 3 LIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHY 62
L+KK+ KA EA G+K +P++T R +I+P MIG I V+NG+ V + EMIGH
Sbjct: 15 LLKKVEKAM-EA--GDK-KPIKTWSRRSMIIPNMIGLTIAVHNGRQHVPVFVTDEMIGHK 70
Query: 63 LAEFS 67
L EFS
Sbjct: 71 LGEFS 75
>TIGR_CMR|CBU_0242 [details] [associations]
symbol:CBU_0242 "ribosomal protein S19" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR002222 InterPro:IPR005732
InterPro:IPR020934 InterPro:IPR023575 Pfam:PF00203
PIRSF:PIRSF002144 PRINTS:PR00975 PROSITE:PS00323 GO:GO:0006412
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003735 GO:GO:0019843
GO:GO:0015935 Gene3D:3.30.860.10 HAMAP:MF_00531 PANTHER:PTHR11880
SUPFAM:SSF54570 TIGRFAMs:TIGR01050 eggNOG:COG0185 KO:K02965
HOGENOM:HOG000111560 OMA:RVIKTWS ProtClustDB:PRK00357
RefSeq:NP_819286.1 ProteinModelPortal:Q83ES0 SMR:Q83ES0
PRIDE:Q83ES0 GeneID:1208123 KEGG:cbu:CBU_0242 PATRIC:17929177
BioCyc:CBUR227377:GJ7S-248-MONOMER Uniprot:Q83ES0
Length = 95
Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 3 LIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHY 62
L+KK+ +A++E G K P++T R ++VPEM+G I ++NG+ V I M+GH
Sbjct: 15 LMKKVDQAQKE---GSK-RPIKTWSRRSMVVPEMVGLTIAIHNGRQHVPVYISENMVGHK 70
Query: 63 LAEFSIS 69
L EF+I+
Sbjct: 71 LGEFAIT 77
>UNIPROTKB|Q9KNY8 [details] [associations]
symbol:rpsS "30S ribosomal protein S19" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR002222 InterPro:IPR005732
InterPro:IPR020934 InterPro:IPR023575 Pfam:PF00203
PIRSF:PIRSF002144 PRINTS:PR00975 PROSITE:PS00323 GO:GO:0006412
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003735 GO:GO:0019843
GO:GO:0015935 Gene3D:3.30.860.10 HAMAP:MF_00531 PANTHER:PTHR11880
SUPFAM:SSF54570 TIGRFAMs:TIGR01050 eggNOG:COG0185 KO:K02965
OMA:RVIKTWS ProtClustDB:PRK00357 PIR:B82059 RefSeq:NP_232220.1
ProteinModelPortal:Q9KNY8 SMR:Q9KNY8 PRIDE:Q9KNY8 DNASU:2615609
GeneID:2615609 KEGG:vch:VC2592 PATRIC:20084210 Uniprot:Q9KNY8
Length = 92
Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 7 LRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEF 66
L+K ++ G+K +P++T R +I+P MIG I V+NG+ V + EMIGH L EF
Sbjct: 16 LKKVEKAVESGDK-KPIKTWSRRSMIIPTMIGLTIAVHNGRQHVPVFVTDEMIGHKLGEF 74
Query: 67 S 67
+
Sbjct: 75 A 75
>TIGR_CMR|VC_2592 [details] [associations]
symbol:VC_2592 "ribosomal protein S19" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR002222 InterPro:IPR005732 InterPro:IPR020934
InterPro:IPR023575 Pfam:PF00203 PIRSF:PIRSF002144 PRINTS:PR00975
PROSITE:PS00323 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003735 GO:GO:0019843 GO:GO:0015935
Gene3D:3.30.860.10 HAMAP:MF_00531 PANTHER:PTHR11880 SUPFAM:SSF54570
TIGRFAMs:TIGR01050 eggNOG:COG0185 KO:K02965 OMA:RVIKTWS
ProtClustDB:PRK00357 PIR:B82059 RefSeq:NP_232220.1
ProteinModelPortal:Q9KNY8 SMR:Q9KNY8 PRIDE:Q9KNY8 DNASU:2615609
GeneID:2615609 KEGG:vch:VC2592 PATRIC:20084210 Uniprot:Q9KNY8
Length = 92
Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 7 LRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEF 66
L+K ++ G+K +P++T R +I+P MIG I V+NG+ V + EMIGH L EF
Sbjct: 16 LKKVEKAVESGDK-KPIKTWSRRSMIIPTMIGLTIAVHNGRQHVPVFVTDEMIGHKLGEF 74
Query: 67 S 67
+
Sbjct: 75 A 75
>UNIPROTKB|P0A7U3 [details] [associations]
symbol:rpsS species:83333 "Escherichia coli K-12"
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000049
"tRNA binding" evidence=IEA] InterPro:IPR002222 InterPro:IPR005732
InterPro:IPR020934 InterPro:IPR023575 Pfam:PF00203
PIRSF:PIRSF002144 PRINTS:PR00975 PROSITE:PS00323 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0006412 EMBL:U18997 GO:GO:0003735 GO:GO:0000049 GO:GO:0019843
PDB:3J00 PDBsum:3J00 PDB:3FIH PDB:3IZV PDB:3IZW PDBsum:3FIH
PDBsum:3IZV PDBsum:3IZW GO:GO:0022627 PDB:3SFS PDB:3UOQ PDBsum:3SFS
PDBsum:3UOQ EMBL:X02613 Gene3D:3.30.860.10 HAMAP:MF_00531
PANTHER:PTHR11880 SUPFAM:SSF54570 TIGRFAMs:TIGR01050 eggNOG:COG0185
KO:K02965 PDB:4GAS PDB:4GD1 PDBsum:4GAS PDBsum:4GD1 PDB:1M5G
PDB:1P6G PDB:1P87 PDB:1VS5 PDB:1VS7 PDB:2AVY PDB:2AW7 PDB:2GY9
PDB:2GYB PDB:2I2P PDB:2I2U PDB:2QAL PDB:2QAN PDB:2QB9 PDB:2QBB
PDB:2QBD PDB:2QBF PDB:2QBH PDB:2QBJ PDB:2QOU PDB:2QOW PDB:2QOY
PDB:2QP0 PDB:2WWL PDB:2YKR PDB:2Z4K PDB:2Z4M PDB:3DF1 PDB:3DF3
PDB:3E1A PDB:3E1C PDB:3I1M PDB:3I1O PDB:3I1Q PDB:3I1S PDB:3I1Z
PDB:3I21 PDB:3J0U PDB:3J0V PDB:3J0X PDB:3J0Z PDB:3J10 PDB:3J13
PDB:3J18 PDB:3KC4 PDB:3OAQ PDB:3OAR PDB:3OFA PDB:3OFB PDB:3OFO
PDB:3OFP PDB:3OFX PDB:3OFY PDB:3OR9 PDB:3ORA PDB:4A2I PDB:4ADV
PDB:4GAQ PDB:4GD2 PDBsum:1M5G PDBsum:1P6G PDBsum:1P87 PDBsum:1VS5
PDBsum:1VS7 PDBsum:2AVY PDBsum:2AW7 PDBsum:2GY9 PDBsum:2GYB
PDBsum:2I2P PDBsum:2I2U PDBsum:2QAL PDBsum:2QAN PDBsum:2QB9
PDBsum:2QBB PDBsum:2QBD PDBsum:2QBF PDBsum:2QBH PDBsum:2QBJ
PDBsum:2QOU PDBsum:2QOW PDBsum:2QOY PDBsum:2QP0 PDBsum:2WWL
PDBsum:2YKR PDBsum:2Z4K PDBsum:2Z4M PDBsum:3DF1 PDBsum:3DF3
PDBsum:3E1A PDBsum:3E1C PDBsum:3I1M PDBsum:3I1O PDBsum:3I1Q
PDBsum:3I1S PDBsum:3I1Z PDBsum:3I21 PDBsum:3J0U PDBsum:3J0V
PDBsum:3J0X PDBsum:3J0Z PDBsum:3J10 PDBsum:3J13 PDBsum:3J18
PDBsum:3KC4 PDBsum:3OAQ PDBsum:3OAR PDBsum:3OFA PDBsum:3OFB
PDBsum:3OFO PDBsum:3OFP PDBsum:3OFX PDBsum:3OFY PDBsum:3OR9
PDBsum:3ORA PDBsum:4A2I PDBsum:4ADV PDBsum:4GAQ PDBsum:4GD2
HOGENOM:HOG000111560 OMA:RVIKTWS ProtClustDB:PRK00357 PIR:F23129
RefSeq:NP_417775.1 RefSeq:YP_492116.1 ProteinModelPortal:P0A7U3
SMR:P0A7U3 DIP:DIP-47904N IntAct:P0A7U3 PaxDb:P0A7U3 PRIDE:P0A7U3
EnsemblBacteria:EBESCT00000001862 EnsemblBacteria:EBESCT00000017305
GeneID:12932294 GeneID:947811 KEGG:ecj:Y75_p3860 KEGG:eco:b3316
PATRIC:32122064 EchoBASE:EB0911 EcoGene:EG10918
BioCyc:EcoCyc:EG10918-MONOMER BioCyc:ECOL316407:JW3278-MONOMER
EvolutionaryTrace:P0A7U3 Genevestigator:P0A7U3 Uniprot:P0A7U3
Length = 92
Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 7 LRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEF 66
L+K ++ G+K +P+RT R I P MIG I V+NG+ V + EM+GH L EF
Sbjct: 16 LKKVEKAVESGDK-KPLRTWSRRSTIFPNMIGLTIAVHNGRQHVPVFVTDEMVGHKLGEF 74
Query: 67 S 67
+
Sbjct: 75 A 75
>TIGR_CMR|CPS_0869 [details] [associations]
symbol:CPS_0869 "ribosomal protein S19" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR002222 InterPro:IPR005732 InterPro:IPR020934
InterPro:IPR023575 Pfam:PF00203 PIRSF:PIRSF002144 PRINTS:PR00975
PROSITE:PS00323 GO:GO:0006412 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0003735 GO:GO:0019843 GO:GO:0015935
Gene3D:3.30.860.10 HAMAP:MF_00531 PANTHER:PTHR11880 SUPFAM:SSF54570
TIGRFAMs:TIGR01050 eggNOG:COG0185 KO:K02965 HOGENOM:HOG000111560
OMA:RVIKTWS ProtClustDB:PRK00357 RefSeq:YP_267618.1
ProteinModelPortal:Q487Z7 SMR:Q487Z7 STRING:Q487Z7 PRIDE:Q487Z7
GeneID:3521657 KEGG:cps:CPS_0869 PATRIC:21465031
BioCyc:CPSY167879:GI48-955-MONOMER Uniprot:Q487Z7
Length = 91
Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 7 LRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEF 66
L K ++ G K +P++T R +I+P MIG I V+NG+ V + EMIGH L EF
Sbjct: 16 LTKVEKAVESGNK-KPIKTWSRRSMIIPTMIGLTIAVHNGRQHVPVFVTEEMIGHKLGEF 74
Query: 67 S 67
+
Sbjct: 75 A 75
>POMBASE|SPAC1751.02c [details] [associations]
symbol:rsm19 "mitochondrial ribosomal protein subunit
S19 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005763 "mitochondrial small ribosomal subunit"
evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0032543
"mitochondrial translation" evidence=NAS] InterPro:IPR002222
InterPro:IPR020934 InterPro:IPR023575 Pfam:PF00203
PIRSF:PIRSF002144 PRINTS:PR00975 PROSITE:PS00323
PomBase:SPAC1751.02c EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0003723 GO:GO:0003735 GO:GO:0032543 GO:GO:0005763
Gene3D:3.30.860.10 HAMAP:MF_00531 PANTHER:PTHR11880 SUPFAM:SSF54570
eggNOG:COG0185 HOGENOM:HOG000111560 PIR:T50089 RefSeq:NP_592912.2
STRING:Q9US30 PRIDE:Q9US30 EnsemblFungi:SPAC1751.02c.1
GeneID:2542342 KEGG:spo:SPAC1751.02c OMA:KIAPIRT OrthoDB:EOG4BP4NN
NextBio:20803403 Uniprot:Q9US30
Length = 93
Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 22 PVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYK 71
P++T +R+ I+P M+G+ V+NGK++ V+I +MIGH L EF+ + K
Sbjct: 34 PIKTAVRSATILPRMVGAQFMVHNGKSYANVKITEDMIGHKLGEFAPTRK 83
>TIGR_CMR|CHY_2305 [details] [associations]
symbol:CHY_2305 "ribosomal protein S19" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR002222 InterPro:IPR005732
InterPro:IPR020934 InterPro:IPR023575 Pfam:PF00203
PIRSF:PIRSF002144 PRINTS:PR00975 PROSITE:PS00323 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
GO:GO:0015935 Gene3D:3.30.860.10 HAMAP:MF_00531 PANTHER:PTHR11880
SUPFAM:SSF54570 TIGRFAMs:TIGR01050 eggNOG:COG0185 KO:K02965
HOGENOM:HOG000111560 OMA:RVIKTWS ProtClustDB:PRK00357
RefSeq:YP_361114.1 ProteinModelPortal:Q3A9S0 SMR:Q3A9S0
STRING:Q3A9S0 GeneID:3726240 KEGG:chy:CHY_2305 PATRIC:21277681
BioCyc:CHYD246194:GJCN-2304-MONOMER Uniprot:Q3A9S0
Length = 94
Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 33/88 (37%), Positives = 45/88 (51%)
Query: 5 KKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLA 64
K L+K + GEK ++T R I P+M+G I VY+G+ V I EM+GH L
Sbjct: 14 KLLKKIEELNAKGEK-RVIKTWSRRSTIFPQMVGHTIAVYDGRKHVPVYITEEMVGHKLG 72
Query: 65 EFSISYKPVKHGRPGIGATHSSRFIPLK 92
EF+ P + R G G H+ R LK
Sbjct: 73 EFA----PTRTFR-GHG-DHTERSTALK 94
>SGD|S000005320 [details] [associations]
symbol:RSM19 "Mitochondrial ribosomal protein of the small
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0003735
"structural constituent of ribosome" evidence=IEA;IPI] [GO:0006412
"translation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0005763 "mitochondrial small ribosomal
subunit" evidence=IPI] [GO:0032543 "mitochondrial translation"
evidence=IC] InterPro:IPR002222 InterPro:IPR020934
InterPro:IPR023575 Pfam:PF00203 PIRSF:PIRSF002144 PRINTS:PR00975
PROSITE:PS00323 SGD:S000005320 EMBL:BK006947 GO:GO:0003723
GO:GO:0003735 GO:GO:0032543 GO:GO:0005763 RefSeq:NP_014435.3
GeneID:855773 KEGG:sce:YNR037C RefSeq:NP_014443.3 GeneID:855781
KEGG:sce:YNR045W Gene3D:3.30.860.10 HAMAP:MF_00531
PANTHER:PTHR11880 SUPFAM:SSF54570 eggNOG:COG0185
HOGENOM:HOG000111560 OMA:QFVGLKF OrthoDB:EOG4BP4NN EMBL:Z71652
PIR:S63368 ProteinModelPortal:P53733 SMR:P53733 DIP:DIP-4257N
IntAct:P53733 MINT:MINT-498533 STRING:P53733 PaxDb:P53733
PRIDE:P53733 EnsemblFungi:YNR037C CYGD:YNR037c NextBio:980229
Genevestigator:P53733 GermOnline:YNR037C Uniprot:P53733
Length = 91
Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 19 KPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYK 71
K P+RT+ R I+P+ +G ++NGK + +EI +M+GH L EF+ + K
Sbjct: 29 KGTPIRTNARAATILPQFVGLKFQIHNGKEYVPIEISEDMVGHKLGEFAPTRK 81
>TIGR_CMR|NSE_0270 [details] [associations]
symbol:NSE_0270 "ribosomal protein S19" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR002222 InterPro:IPR005732 InterPro:IPR020934
InterPro:IPR023575 Pfam:PF00203 PIRSF:PIRSF002144 PRINTS:PR00975
PROSITE:PS00323 GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
EMBL:CP000237 GenomeReviews:CP000237_GR GO:GO:0015935
Gene3D:3.30.860.10 HAMAP:MF_00531 PANTHER:PTHR11880 SUPFAM:SSF54570
TIGRFAMs:TIGR01050 eggNOG:COG0185 KO:K02965 HOGENOM:HOG000111560
RefSeq:YP_506161.1 ProteinModelPortal:Q2GED5 STRING:Q2GED5
GeneID:3931362 KEGG:nse:NSE_0270 PATRIC:22680631 OMA:QFVGLKF
BioCyc:NSEN222891:GHFU-297-MONOMER Uniprot:Q2GED5
Length = 91
Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 23/65 (35%), Positives = 34/65 (52%)
Query: 3 LIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHY 62
+IK R+A+ G ++ R +I+P +G GVYNGK F V++ M+GH
Sbjct: 15 VIKLARRAR-----GNPNVLIKIRSRRSVILPAFVGYTFGVYNGKVFIPVKVNENMVGHK 69
Query: 63 LAEFS 67
EFS
Sbjct: 70 FGEFS 74
>TIGR_CMR|ECH_0413 [details] [associations]
symbol:ECH_0413 "ribosomal protein S19" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR002222 InterPro:IPR005732 InterPro:IPR020934
InterPro:IPR023575 Pfam:PF00203 PIRSF:PIRSF002144 PRINTS:PR00975
PROSITE:PS00323 EMBL:CP000236 GenomeReviews:CP000236_GR
GO:GO:0006412 GO:GO:0003735 GO:GO:0019843 GO:GO:0015935
Gene3D:3.30.860.10 HAMAP:MF_00531 PANTHER:PTHR11880 SUPFAM:SSF54570
TIGRFAMs:TIGR01050 eggNOG:COG0185 KO:K02965 HOGENOM:HOG000111560
ProtClustDB:PRK00357 RefSeq:YP_507231.1 ProteinModelPortal:Q2GH52
STRING:Q2GH52 GeneID:3928003 KEGG:ech:ECH_0413 PATRIC:20576303
OMA:PTRRYTG BioCyc:ECHA205920:GJNR-414-MONOMER Uniprot:Q2GH52
Length = 93
Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 23 VRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKH 75
+ H R+ +I+ + IG GVYNGKT+ V++ M+G EFS + + H
Sbjct: 32 INIHSRSSVILNKFIGLTFGVYNGKTYVPVKVNDNMVGRKFGEFSPTRRYTGH 84
>TIGR_CMR|APH_0284 [details] [associations]
symbol:APH_0284 "ribosomal protein S19" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR002222 InterPro:IPR005732 InterPro:IPR020934
InterPro:IPR023575 Pfam:PF00203 PIRSF:PIRSF002144 PRINTS:PR00975
PROSITE:PS00323 GO:GO:0006412 GO:GO:0003735 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0019843 GO:GO:0015935
Gene3D:3.30.860.10 HAMAP:MF_00531 PANTHER:PTHR11880 SUPFAM:SSF54570
TIGRFAMs:TIGR01050 eggNOG:COG0185 KO:K02965 RefSeq:YP_504896.1
ProteinModelPortal:Q2GL55 STRING:Q2GL55 GeneID:3930917
KEGG:aph:APH_0284 PATRIC:20949142 HOGENOM:HOG000111560 OMA:RVIKTWS
ProtClustDB:PRK00357 BioCyc:APHA212042:GHPM-314-MONOMER
Uniprot:Q2GL55
Length = 94
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 7 LRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEF 66
LR A R + H R+ +I+ + +G GVYNGKT+ V++ ++G EF
Sbjct: 16 LRLANRVIASNRTSVVINIHSRSSVILNKFVGLTFGVYNGKTYVPVKVTDNIVGRKFGEF 75
Query: 67 SISYKPVKH 75
S + + + H
Sbjct: 76 SPTRRFLGH 84
>TIGR_CMR|CJE_1871 [details] [associations]
symbol:CJE_1871 "ribosomal protein S19" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR002222 InterPro:IPR005732
InterPro:IPR020934 InterPro:IPR023575 Pfam:PF00203
PIRSF:PIRSF002144 PRINTS:PR00975 PROSITE:PS00323 GO:GO:0006412
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0003735 GO:GO:0019843
GO:GO:0015935 Gene3D:3.30.860.10 HAMAP:MF_00531 PANTHER:PTHR11880
SUPFAM:SSF54570 TIGRFAMs:TIGR01050 eggNOG:COG0185 KO:K02965
HSSP:P80381 HOGENOM:HOG000111560 OMA:RVIKTWS ProtClustDB:PRK00357
RefSeq:YP_179841.1 ProteinModelPortal:Q5HS94 SMR:Q5HS94
STRING:Q5HS94 GeneID:3232498 KEGG:cjr:CJE1871 PATRIC:20045574
BioCyc:CJEJ195099:GJC0-1910-MONOMER Uniprot:Q5HS94
Length = 93
Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 3 LIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHY 62
++KK+ AK+ +P++T R I P+MIG V+NGK+F V I IG+
Sbjct: 15 VMKKVIAAKK----ANDNKPIKTWSRRSTITPDMIGLTFNVHNGKSFIPVYITENHIGYK 70
Query: 63 LAEFS 67
L EF+
Sbjct: 71 LGEFA 75
>TIGR_CMR|BA_0114 [details] [associations]
symbol:BA_0114 "ribosomal protein S19" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR002222 InterPro:IPR005732 InterPro:IPR020934
InterPro:IPR023575 Pfam:PF00203 PIRSF:PIRSF002144 PRINTS:PR00975
PROSITE:PS00323 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
GO:GO:0015935 Gene3D:3.30.860.10 HAMAP:MF_00531 PANTHER:PTHR11880
SUPFAM:SSF54570 TIGRFAMs:TIGR01050 eggNOG:COG0185 KO:K02965
HOGENOM:HOG000111560 OMA:RVIKTWS ProtClustDB:PRK00357
RefSeq:NP_842682.1 RefSeq:YP_016719.1 RefSeq:YP_026400.1
ProteinModelPortal:Q81VS6 SMR:Q81VS6 DNASU:1084693
EnsemblBacteria:EBBACT00000010012 EnsemblBacteria:EBBACT00000018644
EnsemblBacteria:EBBACT00000019259 GeneID:1084693 GeneID:2818193
GeneID:2852421 KEGG:ban:BA_0114 KEGG:bar:GBAA_0114 KEGG:bat:BAS0114
BioCyc:BANT260799:GJAJ-125-MONOMER
BioCyc:BANT261594:GJ7F-127-MONOMER Uniprot:Q81VS6
Length = 92
Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 18 EKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFS 67
E+ + V+T R I P+ IG I VY+G+ V + +M+GH L EF+
Sbjct: 26 EQKQVVKTWSRRSTIFPQFIGHTIAVYDGRKHVPVYVTEDMVGHKLGEFA 75
>TIGR_CMR|GSU_2853 [details] [associations]
symbol:GSU_2853 "ribosomal protein S19" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR002222
InterPro:IPR005732 InterPro:IPR020934 InterPro:IPR023575
Pfam:PF00203 PIRSF:PIRSF002144 PRINTS:PR00975 PROSITE:PS00323
GO:GO:0006412 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003735
GO:GO:0019843 GO:GO:0015935 Gene3D:3.30.860.10 HAMAP:MF_00531
PANTHER:PTHR11880 SUPFAM:SSF54570 TIGRFAMs:TIGR01050 eggNOG:COG0185
KO:K02965 HOGENOM:HOG000111560 OMA:RVIKTWS ProtClustDB:PRK00357
RefSeq:NP_953896.1 ProteinModelPortal:Q748Z2 SMR:Q748Z2
GeneID:2685869 KEGG:gsu:GSU2853 PATRIC:22028553
BioCyc:GSUL243231:GH27-2827-MONOMER Uniprot:Q748Z2
Length = 93
Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
Identities = 22/60 (36%), Positives = 32/60 (53%)
Query: 8 RKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFS 67
+K E+ G K + ++T R I P+ IG V+NGK F V + M+GH L EF+
Sbjct: 17 KKVAAESA-GSK-KVIKTWSRRSTITPDFIGLTFAVHNGKKFIPVFVTENMVGHKLGEFA 74
>TAIR|locus:2171539 [details] [associations]
symbol:RPS19 "ribosomal protein S19" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;NAS] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0006354 "DNA-dependent transcription,
elongation" evidence=RCA] [GO:0005763 "mitochondrial small
ribosomal subunit" evidence=IDA] InterPro:IPR000504
InterPro:IPR002222 InterPro:IPR005732 InterPro:IPR012677
InterPro:IPR020934 InterPro:IPR023575 Pfam:PF00076 Pfam:PF00203
PRINTS:PR00975 PROSITE:PS00323 PROSITE:PS50102 SMART:SM00360
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166 GO:GO:0006412
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0003735 eggNOG:COG0724
GO:GO:0005763 EMBL:AB018117 Gene3D:3.30.860.10 HAMAP:MF_00531
SUPFAM:SSF54570 TIGRFAMs:TIGR01050 KO:K02965 EMBL:X78035
EMBL:X77989 EMBL:AY045963 EMBL:AY091354 EMBL:Z18203 IPI:IPI00544075
PIR:S71114 RefSeq:NP_568681.1 UniGene:At.5396
ProteinModelPortal:P39697 SMR:P39697 STRING:P39697 PaxDb:P39697
PRIDE:P39697 EnsemblPlants:AT5G47320.1 GeneID:834779
KEGG:ath:AT5G47320 GeneFarm:3993 TAIR:At5g47320 InParanoid:P39697
PhylomeDB:P39697 Genevestigator:P39697 GermOnline:AT5G47320
Uniprot:P39697
Length = 212
Score = 95 (38.5 bits), Expect = 0.00016, P = 0.00016
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 28 RNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGR 77
R I+PE + S + +YNGKT + +I +GH EF+ + K KH +
Sbjct: 161 RRSTILPEYVDSAVRIYNGKTHVRCKITEGKVGHKFGEFAFTRKVKKHAK 210
>TIGR_CMR|DET_0478 [details] [associations]
symbol:DET_0478 "ribosomal protein S19" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR002222 InterPro:IPR005732
InterPro:IPR020934 InterPro:IPR023575 Pfam:PF00203
PIRSF:PIRSF002144 PRINTS:PR00975 PROSITE:PS00323 GO:GO:0006412
GO:GO:0003735 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0019843
GO:GO:0015935 Gene3D:3.30.860.10 HAMAP:MF_00531 PANTHER:PTHR11880
SUPFAM:SSF54570 TIGRFAMs:TIGR01050 eggNOG:COG0185 KO:K02965
HOGENOM:HOG000111560 OMA:RVIKTWS ProtClustDB:PRK00357
RefSeq:YP_181222.1 ProteinModelPortal:Q3Z977 SMR:Q3Z977
STRING:Q3Z977 GeneID:3230151 KEGG:det:DET0478 PATRIC:21608025
BioCyc:DETH243164:GJNF-478-MONOMER Uniprot:Q3Z977
Length = 93
Score = 91 (37.1 bits), Expect = 0.00017, P = 0.00017
Identities = 22/66 (33%), Positives = 33/66 (50%)
Query: 2 ALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGH 61
AL KL K A + ++T R I P M+G +GV++G+ + I M+GH
Sbjct: 10 ALCPKLMKKVEVASATNQKSIIKTWARWSTITPLMVGLNVGVHDGRRHVPIYITENMVGH 69
Query: 62 YLAEFS 67
L EF+
Sbjct: 70 RLGEFT 75
>TIGR_CMR|SPO_0485 [details] [associations]
symbol:SPO_0485 "ribosomal protein S19" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR002222
InterPro:IPR005732 InterPro:IPR020934 InterPro:IPR023575
Pfam:PF00203 PIRSF:PIRSF002144 PRINTS:PR00975 PROSITE:PS00323
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0003735
GO:GO:0019843 GO:GO:0015935 Gene3D:3.30.860.10 HAMAP:MF_00531
PANTHER:PTHR11880 SUPFAM:SSF54570 TIGRFAMs:TIGR01050 eggNOG:COG0185
KO:K02965 HSSP:P80381 HOGENOM:HOG000111560 OMA:RVIKTWS
ProtClustDB:PRK00357 RefSeq:YP_165747.1 ProteinModelPortal:Q5LW58
GeneID:3195270 KEGG:sil:SPO0485 PATRIC:23374231 Uniprot:Q5LW58
Length = 92
Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
Identities = 20/61 (32%), Positives = 30/61 (49%)
Query: 7 LRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEF 66
L+KA G E ++ R I+P+ +G GVYNG+ V + +MIG E+
Sbjct: 16 LKKAAAVRESGRN-EVIKIWSRRSTILPQFVGLTFGVYNGQKHIPVNVTEDMIGQKFGEY 74
Query: 67 S 67
S
Sbjct: 75 S 75
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.139 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 92 92 0.00091 102 3 11 22 0.36 30
29 0.40 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 48
No. of states in DFA: 457 (49 KB)
Total size of DFA: 90 KB (2068 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.50u 0.12s 10.62t Elapsed: 00:00:02
Total cpu time: 10.50u 0.12s 10.62t Elapsed: 00:00:02
Start: Thu May 9 19:01:04 2013 End: Thu May 9 19:01:06 2013