Citrus Sinensis ID: 034555

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-
Protein Sequence
MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPPQDWLVGESLPSNFNPEIIQMTLKELSPKTVR
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccHHHEEEcHHHHHHccHHHHHHHHHHccHHccc
Coil and Loop (DISEMBL)
MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVtfhyqdkvppidYVVTVAAnmetyppqdwlvgeslpsnfnpEIIQMTLKelspktvr
Flexible Loop (DISEMBL)
MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPPQDWLVGESLPSNFNPEIIQMtlkelspktvr
Low Complexity Region (SEG)
MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPPQDWLVGESLPSNFNPEIIQMTLKELSPKTVR
Disordered region (IsUnstruct)
***VVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPPQDWLVGESLPSNFNPEII*************
Disordered Region (DISOPRED)
MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPPQDWLVGESLPSNFNPEIIQMTLKELSPKTVR
Disordered Region (DISEMBL)
MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPPQDWLVGESLPSNFNPEIIQMTLKELSPKTVR
Disordered Region (DISPRO)
MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPPQDWLVGESLPSNFNPEIIQMTLKELSP****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPPQDWLVGESLPSNFNPEIIQMTLKELSPKTVR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	91	2.2.26 [Sep-21-2011]
O22941	970	Zinc-metallopeptidase, pe	yes	no	1.0	0.093	0.615	5e-32
P47245	1161	Nardilysin OS=Rattus norv	yes	no	0.945	0.074	0.360	4e-13
Q8BHG1	1161	Nardilysin OS=Mus musculu	yes	no	0.945	0.074	0.360	4e-13
O43847	1150	Nardilysin OS=Homo sapien	yes	no	0.945	0.074	0.372	2e-12
Q5R4H6	1152	Nardilysin OS=Pongo abeli	no	no	0.945	0.074	0.372	3e-12
Q24K02	1019	Insulin-degrading enzyme	no	no	1.0	0.089	0.329	2e-11
P14735	1019	Insulin-degrading enzyme	no	no	1.0	0.089	0.329	2e-11
P35559	1019	Insulin-degrading enzyme	no	no	1.0	0.089	0.329	5e-11
Q9JHR7	1019	Insulin-degrading enzyme	no	no	1.0	0.089	0.329	5e-11
P22817	990	Insulin-degrading enzyme	yes	no	0.978	0.089	0.314	2e-10

>sp|O22941|PXM16_ARATH Zinc-metallopeptidase, peroxisomal OS=Arabidopsis thaliana GN=PXM16 PE=2 SV=1

 Score =  135 bits (341), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 56/91 (61%), Positives = 72/91 (79%)

Query: 1   MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
           MQ+++GLLF YI LLQQ+G  +WIFDELSA+CE  FHYQDK+PP+ Y+V +A+NM+ YP 
Sbjct: 348 MQEILGLLFNYIQLLQQTGVCQWIFDELSAICETKFHYQDKIPPMSYIVDIASNMQIYPT 407

Query: 61  QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
           +DWLVG SLP+ FNP I+Q  + ELSP   R
Sbjct: 408 KDWLVGSSLPTKFNPAIVQKVVDELSPSNFR 438

Peptidase that might be involved in pathogen or wound response. Not required for peroxisome biogenesis, indole-3-butyric acid (IBA) metabolism, fatty acid beta-oxidation or degradation of glyoxylate cycle enzymes during seedling development.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 4EC: .EC: -

>sp|P47245|NRDC_RAT Nardilysin OS=Rattus norvegicus GN=Nrd1 PE=2 SV=1

 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 54/86 (62%)

Query: 3   DVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPPQD 62
           +V   +F+Y+ +LQ+ G  K +F+E+  + +  FHYQ++  P++YV  +  NM+ YP QD
Sbjct: 531 EVAHTVFQYLKMLQKLGPEKRVFEEIQKIEDNEFHYQEQTDPVEYVENMCENMQLYPRQD 590

Query: 63  WLVGESLPSNFNPEIIQMTLKELSPK 88
           +L G+ L   + PE+I   L +L P+
Sbjct: 591 FLTGDQLLFEYKPEVIAEALNQLVPQ 616

Cleaves peptide substrates on the N-terminus of arginine residues in dibasic pairs.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 4

EC: .

EC: 6

EC: 1

>sp|Q8BHG1|NRDC_MOUSE Nardilysin OS=Mus musculus GN=Nrd1 PE=1 SV=1

 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 54/86 (62%)

Query: 3   DVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPPQD 62
           +V   +F+Y+ +LQ+ G  K +F+E+  + +  FHYQ++  P++YV  +  NM+ YP QD
Sbjct: 531 EVAHTVFQYLKMLQKLGPEKRVFEEIQKIEDNEFHYQEQTDPVEYVENMCENMQLYPRQD 590

Query: 63  WLVGESLPSNFNPEIIQMTLKELSPK 88
           +L G+ L   + PE+I   L +L P+
Sbjct: 591 FLTGDQLLFEYKPEVIAEALNQLVPQ 616

Cleaves peptide substrates on the N-terminus of arginine residues in dibasic pairs.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 4

EC: .

EC: 6

EC: 1

>sp|O43847|NRDC_HUMAN Nardilysin OS=Homo sapiens GN=NRD1 PE=1 SV=2

 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 53/86 (61%)

Query: 3   DVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPPQD 62
           +V   +F+Y+ +LQ+ G  K IF+E+  + +  FHYQ++  P++YV  +  NM+ YP QD
Sbjct: 519 EVAYTVFQYLKMLQKLGPEKRIFEEIRKIEDNEFHYQEQTDPVEYVENMCENMQLYPLQD 578

Query: 63  WLVGESLPSNFNPEIIQMTLKELSPK 88
            L G+ L   + PE+I   L +L P+
Sbjct: 579 ILTGDQLLFEYKPEVIGEALNQLVPQ 604

Cleaves peptide substrates on the N-terminus of arginine residues in dibasic pairs.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 4

EC: .

EC: 6

EC: 1

>sp|Q5R4H6|NRDC_PONAB Nardilysin OS=Pongo abelii GN=NRD1 PE=2 SV=1

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 53/86 (61%)

Query: 3   DVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPPQD 62
           +V   +F+Y+ +LQ+ G  K IF+E+  + +  FHYQ++  P++YV  +  NM+ YP QD
Sbjct: 521 EVAYTVFQYLKMLQKLGPEKRIFEEIQKIEDNEFHYQEQTDPVEYVENMCENMQPYPLQD 580

Query: 63  WLVGESLPSNFNPEIIQMTLKELSPK 88
            L G+ L   + PE+I   L +L P+
Sbjct: 581 ILTGDQLLFEYKPEVIGEALNQLVPQ 606

Cleaves peptide substrates on the N-terminus of arginine residues in dibasic pairs.

Pongo abelii (taxid: 9601)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 4

EC: .

EC: 6

EC: 1

>sp|Q24K02|IDE_BOVIN Insulin-degrading enzyme OS=Bos taurus GN=IDE PE=2 SV=1

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 51/91 (56%)

Query: 1   MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
           ++D++  +F+YI  L+  G  +W+F E   +  V F ++DK  P  Y   +A  +  YP 
Sbjct: 387 VEDIILHMFQYIQKLRAEGPQEWVFQECKDLNAVAFRFKDKERPRGYTSKIAGILHYYPL 446

Query: 61  QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
           ++ L  E L   F P++I+M L +L P+ VR
Sbjct: 447 EEVLTAEYLLEEFRPDLIEMVLDKLRPENVR 477

Plays a role in the cellular breakdown of insulin, IAPP, glucagon, bradykinin, kallidin and other peptides, and thereby plays a role in intercellular peptide signaling. Degrades amyloid formed by APP and IAPP.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 4

EC: .

EC: 5

EC: 6

>sp|P14735|IDE_HUMAN Insulin-degrading enzyme OS=Homo sapiens GN=IDE PE=1 SV=4

 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 51/91 (56%)

Query: 1   MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
           ++D++  +F+YI  L+  G  +W+F E   +  V F ++DK  P  Y   +A  +  YP 
Sbjct: 387 VEDIILHMFQYIQKLRAEGPQEWVFQECKDLNAVAFRFKDKERPRGYTSKIAGILHYYPL 446

Query: 61  QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
           ++ L  E L   F P++I+M L +L P+ VR
Sbjct: 447 EEVLTAEYLLEEFRPDLIEMVLDKLRPENVR 477

Plays a role in the cellular breakdown of insulin, IAPP, glucagon, bradykinin, kallidin and other peptides, and thereby plays a role in intercellular peptide signaling. Degrades amyloid formed by APP and IAPP. May play a role in the degradation and clearance of naturally secreted amyloid beta-protein by neurons and microglia.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 4

EC: .

EC: 5

EC: 6

>sp|P35559|IDE_RAT Insulin-degrading enzyme OS=Rattus norvegicus GN=Ide PE=1 SV=1

 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 48/91 (52%)

Query: 1   MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
           ++D++  +F+YI  L+  G  +W+F E   +  V F ++DK  P  Y   +A  +  YP 
Sbjct: 387 VEDIILHMFQYIQKLRAEGPQEWVFQECKDLNAVAFRFKDKERPRGYTSKIAGKLHYYPL 446

Query: 61  QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
              L  E L   F P++I M L +L P+ VR
Sbjct: 447 NGVLTAEYLLEEFRPDLIDMVLDKLRPENVR 477

Plays a role in the cellular breakdown of insulin, IAPP, glucagon, bradykinin, kallidin and other peptides, and thereby plays a role in intercellular peptide signaling. Degrades amyloid formed by APP and IAPP.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 4

EC: .

EC: 5

EC: 6

>sp|Q9JHR7|IDE_MOUSE Insulin-degrading enzyme OS=Mus musculus GN=Ide PE=1 SV=1

 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 48/91 (52%)

Query: 1   MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
           ++D++  +F+YI  L+  G  +W+F E   +  V F ++DK  P  Y   +A  +  YP 
Sbjct: 387 VEDIILHMFQYIQKLRAEGPQEWVFQECKDLNAVAFRFKDKERPRGYTSKIAGKLHYYPL 446

Query: 61  QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
              L  E L   F P++I M L +L P+ VR
Sbjct: 447 NGVLTAEYLLEEFRPDLIDMVLDKLRPENVR 477

Plays a role in the cellular breakdown of insulin, IAPP, glucagon, bradykinin, kallidin and other peptides, and thereby plays a role in intercellular peptide signaling. Degrades amyloid formed by APP and IAPP.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 4

EC: .

EC: 5

EC: 6

>sp|P22817|IDE_DROME Insulin-degrading enzyme OS=Drosophila melanogaster GN=Ide PE=1 SV=4

 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 54/89 (60%)

Query: 3   DVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPPQD 62
           D+V ++F+Y+ +L++ G  KWIFDE   + E+ F +++K  P + V    ++M+ +P ++
Sbjct: 362 DIVKIVFQYLEMLRKEGPKKWIFDECVKLNEMRFRFKEKEQPENLVTHAVSSMQIFPLEE 421

Query: 63  WLVGESLPSNFNPEIIQMTLKELSPKTVR 91
            L+   L + + P++I+  L EL P   R
Sbjct: 422 VLIAPYLSNEWRPDLIKGLLDELVPSKSR 450

Can cleave insulin and TGF-alpha.

Drosophila melanogaster (taxid: 7227)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 4

EC: .

EC: 5

EC: 6

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	91
255582581	967	Insulin-degrading enzyme, putative [Rici	1.0	0.094	0.747	4e-37
225441825	965	PREDICTED: zinc-metallopeptidase, peroxi	1.0	0.094	0.725	3e-35
225441823	965	PREDICTED: zinc-metallopeptidase, peroxi	1.0	0.094	0.714	2e-34
224087014	949	predicted protein [Populus trichocarpa]	1.0	0.095	0.725	4e-34
350535204	971	insulin degrading enzyme [Solanum lycope	1.0	0.093	0.692	2e-32
356504785	964	PREDICTED: zinc-metallopeptidase, peroxi	1.0	0.094	0.659	4e-31
15227435	970	insulysin [Arabidopsis thaliana] gi|7509	1.0	0.093	0.615	2e-30
110741612	970	putative zinc protease [Arabidopsis thal	1.0	0.093	0.615	2e-30
449437946	929	PREDICTED: LOW QUALITY PROTEIN: zinc-met	1.0	0.097	0.648	3e-30
356572034	964	PREDICTED: zinc-metallopeptidase, peroxi	1.0	0.094	0.648	4e-30

>gi|255582581|ref|XP_002532073.1| Insulin-degrading enzyme, putative [Ricinus communis] gi|223528255|gb|EEF30307.1| Insulin-degrading enzyme, putative [Ricinus communis]

 Score =  158 bits (399), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 68/91 (74%), Positives = 82/91 (90%)

Query: 1   MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
           MQD++GLLFKYI+LLQQSG S+WIF+EL+AVCE +FHYQDK+PPIDYVVT+A NM  YPP
Sbjct: 343 MQDIIGLLFKYIHLLQQSGVSEWIFNELAAVCETSFHYQDKIPPIDYVVTIACNMNIYPP 402

Query: 61  QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
           +DWLVG SLPSNF+P+IIQM L +LSP +VR
Sbjct: 403 KDWLVGSSLPSNFSPDIIQMVLHQLSPNSVR 433

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225441825|ref|XP_002283993.1| PREDICTED: zinc-metallopeptidase, peroxisomal [Vitis vinifera] gi|297739661|emb|CBI29843.3| unnamed protein product [Vitis vinifera]

 Score =  152 bits (384), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 66/91 (72%), Positives = 78/91 (85%)

Query: 1   MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
           MQD+VGLLFKYI+LLQQ+G  KWIFDELSA+CE  FHYQDK+PPIDYVV V++NME YPP
Sbjct: 341 MQDIVGLLFKYISLLQQTGVCKWIFDELSAICETVFHYQDKIPPIDYVVNVSSNMELYPP 400

Query: 61  QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
           +DWLVG SLPS F+P++IQ  L EL+P  VR
Sbjct: 401 KDWLVGSSLPSKFSPDVIQKVLDELAPNNVR 431

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225441823|ref|XP_002283970.1| PREDICTED: zinc-metallopeptidase, peroxisomal [Vitis vinifera] gi|297739662|emb|CBI29844.3| unnamed protein product [Vitis vinifera]

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 65/91 (71%), Positives = 77/91 (84%)

Query: 1   MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
           MQD+VGLLFKYI+LLQQ+G  KWIFDELSA+CE  FHYQDK+P IDYVV V++NME YPP
Sbjct: 341 MQDIVGLLFKYISLLQQTGVCKWIFDELSAICETMFHYQDKIPSIDYVVNVSSNMELYPP 400

Query: 61  QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
           +DWLVG SLPS F+P++IQ  L EL+P  VR
Sbjct: 401 KDWLVGSSLPSKFSPDVIQKVLDELAPNNVR 431

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224087014|ref|XP_002308028.1| predicted protein [Populus trichocarpa] gi|222854004|gb|EEE91551.1| predicted protein [Populus trichocarpa]

 Score =  148 bits (373), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 66/91 (72%), Positives = 76/91 (83%)

Query: 1   MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
           MQDVVGLLFKYI+LLQQSG  KWIFDEL+A+CE +FHYQDK PPI YVV +A+NM+ YP 
Sbjct: 325 MQDVVGLLFKYIHLLQQSGVCKWIFDELAAICETSFHYQDKTPPISYVVRIASNMQLYPQ 384

Query: 61  QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
           +DWLVG SLPSNF+P IIQ  L +LSP  VR
Sbjct: 385 KDWLVGSSLPSNFSPSIIQTVLNQLSPDNVR 415

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350535204|ref|NP_001233926.1| insulin degrading enzyme [Solanum lycopersicum] gi|15485612|emb|CAC67408.1| insulin degrading enzyme [Solanum lycopersicum]

 Score =  142 bits (359), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 63/91 (69%), Positives = 74/91 (81%)

Query: 1   MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
            +D++GLLFKYI+LLQQ+GASKWIF+ELSA+CE  FHYQDK+ P DYVV VA NM+ YPP
Sbjct: 347 FEDIMGLLFKYIHLLQQAGASKWIFEELSAICETAFHYQDKIRPSDYVVNVAMNMQHYPP 406

Query: 61  QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
           +DWLV  SLPS FNP IIQ  L EL+P  VR
Sbjct: 407 EDWLVASSLPSKFNPSIIQSFLNELNPDNVR 437

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356504785|ref|XP_003521175.1| PREDICTED: zinc-metallopeptidase, peroxisomal-like [Glycine max]

 Score =  138 bits (347), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 60/91 (65%), Positives = 72/91 (79%)

Query: 1   MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
           +QD++GLLFKYI LLQQSG  KWIF+ELSAVCE  FHYQDK+ P DY V +A+NM+ YP 
Sbjct: 343 IQDIIGLLFKYIELLQQSGVCKWIFEELSAVCETKFHYQDKIRPSDYAVNIASNMKFYPV 402

Query: 61  QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
           +DWL G SLPS F+P +IQM L +LSP  VR
Sbjct: 403 KDWLTGSSLPSKFSPSVIQMVLDQLSPNNVR 433

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15227435|ref|NP_181710.1| insulysin [Arabidopsis thaliana] gi|75097648|sp|O22941.1|PXM16_ARATH RecName: Full=Zinc-metallopeptidase, peroxisomal; AltName: Full=Peroxisomal M16 protease gi|2335108|gb|AAC02769.1| putative zinc protease [Arabidopsis thaliana] gi|330254939|gb|AEC10033.1| insulysin [Arabidopsis thaliana]

 Score =  135 bits (341), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 56/91 (61%), Positives = 72/91 (79%)

Query: 1   MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
           MQ+++GLLF YI LLQQ+G  +WIFDELSA+CE  FHYQDK+PP+ Y+V +A+NM+ YP 
Sbjct: 348 MQEILGLLFNYIQLLQQTGVCQWIFDELSAICETKFHYQDKIPPMSYIVDIASNMQIYPT 407

Query: 61  QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
           +DWLVG SLP+ FNP I+Q  + ELSP   R
Sbjct: 408 KDWLVGSSLPTKFNPAIVQKVVDELSPSNFR 438

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|110741612|dbj|BAE98754.1| putative zinc protease [Arabidopsis thaliana]

 Score =  135 bits (341), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 56/91 (61%), Positives = 72/91 (79%)

Query: 1   MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
           MQ+++GLLF YI LLQQ+G  +WIFDELSA+CE  FHYQDK+PP+ Y+V +A+NM+ YP 
Sbjct: 348 MQEILGLLFNYIQLLQQTGVCQWIFDELSAICETKFHYQDKIPPMSYIVDIASNMQIYPT 407

Query: 61  QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
           +DWLVG SLP+ FNP I+Q  + ELSP   R
Sbjct: 408 KDWLVGSSLPTKFNPAIVQKVVDELSPSNFR 438

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449437946|ref|XP_004136751.1| PREDICTED: LOW QUALITY PROTEIN: zinc-metallopeptidase, peroxisomal-like [Cucumis sativus]

 Score =  135 bits (340), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 59/91 (64%), Positives = 74/91 (81%)

Query: 1   MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
           MQDV+GLLFKYI+LL+QSG  +WIFDELSA+CE  FHY DK+ PIDYVV +++NM+ YPP
Sbjct: 348 MQDVIGLLFKYISLLKQSGICQWIFDELSAICETKFHYTDKIRPIDYVVDLSSNMQLYPP 407

Query: 61  QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
           +DWLVG SLPS F+P++I   L +LS   VR
Sbjct: 408 EDWLVGSSLPSKFDPKLIGTVLDQLSVDNVR 438

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356572034|ref|XP_003554175.1| PREDICTED: zinc-metallopeptidase, peroxisomal-like [Glycine max]

 Score =  135 bits (339), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 59/91 (64%), Positives = 72/91 (79%)

Query: 1   MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
           +QD++GLLFKYI LLQ+SG  KWIF+ELSAVCE  FHYQDK+ P DYVV +A+NM+ YP 
Sbjct: 343 IQDIIGLLFKYIELLQRSGVCKWIFEELSAVCETKFHYQDKIRPSDYVVDIASNMQFYPV 402

Query: 61  QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
           + WL G SLPS F+P +IQM L +LSP  VR
Sbjct: 403 KGWLTGSSLPSKFSPSVIQMVLDQLSPDNVR 433

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	91
TAIR|locus:2054346	970	AT2G41790 [Arabidopsis thalian	1.0	0.093	0.615	4.6e-29
TAIR|locus:2103523	891	AT3G57470 [Arabidopsis thalian	1.0	0.102	0.637	1.7e-28
TAIR|locus:2103513	356	AT3G57460 [Arabidopsis thalian	0.604	0.154	0.618	9.5e-15
UNIPROTKB|F1NLC8	1159	NRD1 "Uncharacterized protein"	0.945	0.074	0.383	2.4e-13
UNIPROTKB|F1MXX5	1036	NRD1 "Uncharacterized protein"	0.945	0.083	0.372	9e-13
UNIPROTKB|D4A0M4	1116	Nrd1 "Nardilysin" [Rattus norv	0.945	0.077	0.360	9.9e-13
UNIPROTKB|F1S6G2	1156	NRD1 "Uncharacterized protein"	0.945	0.074	0.372	1e-12
UNIPROTKB|J9P4J0	1159	NRD1 "Uncharacterized protein"	0.945	0.074	0.372	1e-12
MGI|MGI:1201386	1161	Nrd1 "nardilysin, N-arginine d	0.945	0.074	0.360	1e-12
RGD|3210	1161	Nrd1 "nardilysin 1" [Rattus no	0.945	0.074	0.360	1e-12

TAIR|locus:2054346 AT2G41790 [Arabidopsis thaliana (taxid:3702)]

 Score = 334 (122.6 bits), Expect = 4.6e-29, P = 4.6e-29
 Identities = 56/91 (61%), Positives = 72/91 (79%)

Query:     1 MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
             MQ+++GLLF YI LLQQ+G  +WIFDELSA+CE  FHYQDK+PP+ Y+V +A+NM+ YP 
Sbjct:   348 MQEILGLLFNYIQLLQQTGVCQWIFDELSAICETKFHYQDKIPPMSYIVDIASNMQIYPT 407

Query:    61 QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
             +DWLVG SLP+ FNP I+Q  + ELSP   R
Sbjct:   408 KDWLVGSSLPTKFNPAIVQKVVDELSPSNFR 438

GO:0003824 "catalytic activity" evidence=IEA

GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0006508 "proteolysis" evidence=IEA;ISS

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:2103523 AT3G57470 [Arabidopsis thaliana (taxid:3702)]

 Score = 328 (120.5 bits), Expect = 1.7e-28, P = 1.7e-28
 Identities = 58/91 (63%), Positives = 71/91 (78%)

Query:     1 MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
             MQD++GLLF+YI +LQQSG S+WIFDELSA+CE  FHYQ K+ PI Y V +++NM+ YP 
Sbjct:   275 MQDILGLLFEYIKVLQQSGVSQWIFDELSAICEAEFHYQAKIDPISYAVDISSNMKIYPT 334

Query:    61 QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
             + WLVG SLPS FNP I+Q  L ELSP  VR
Sbjct:   335 KHWLVGSSLPSKFNPAIVQKVLDELSPNNVR 365

GO:0003824 "catalytic activity" evidence=IEA

GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006508 "proteolysis" evidence=IEA;ISS

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:2103513 AT3G57460 [Arabidopsis thaliana (taxid:3702)]

 Score = 192 (72.6 bits), Expect = 9.5e-15, P = 9.5e-15
 Identities = 34/55 (61%), Positives = 44/55 (80%)

Query:     1 MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANM 55
             M+D++GLLF+ I LLQQSG S+WIFDELSA+ E  FHYQ K+ PI Y V +++NM
Sbjct:   102 MKDILGLLFRQIKLLQQSGVSQWIFDELSAIFEAEFHYQAKIDPISYAVNISSNM 156

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0046872 "metal ion binding" evidence=IEA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

UNIPROTKB|F1NLC8 NRD1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 188 (71.2 bits), Expect = 2.4e-13, P = 2.4e-13
 Identities = 33/86 (38%), Positives = 56/86 (65%)

Query:     3 DVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPPQD 62
             +V  ++F+Y+ +LQQ G  K I++E+  +    FHYQ++  P+DYV ++  NM+ +P +D
Sbjct:   528 EVAHVVFQYVKMLQQRGPDKRIWEEIQKIEANEFHYQEQTDPVDYVESLCENMQLFPKED 587

Query:    63 WLVGESLPSNFNPEIIQMTLKELSPK 88
             +L G+ L   + PEII   L +LSP+
Sbjct:   588 FLTGDQLLFEYKPEIIADALNQLSPQ 613

GO:0004222 "metalloendopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|F1MXX5 NRD1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 182 (69.1 bits), Expect = 9.0e-13, P = 9.0e-13
 Identities = 32/86 (37%), Positives = 54/86 (62%)

Query:     3 DVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPPQD 62
             +V   +F+Y+ +LQ+ G  K IF+E+  + +  FHYQ++  P++YV  +  NM+ YP QD
Sbjct:   405 EVAHTVFQYLKMLQKLGPEKRIFEEIQKIEDNEFHYQEQTDPVEYVENMCENMQLYPLQD 464

Query:    63 WLVGESLPSNFNPEIIQMTLKELSPK 88
             +L G+ L   + PE+I   L +L P+
Sbjct:   465 FLTGDQLLFEYKPEVIAEALNQLVPQ 490

GO:0005739 "mitochondrion" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0004222 "metalloendopeptidase activity" evidence=IEA

UNIPROTKB|D4A0M4 Nrd1 "Nardilysin" [Rattus norvegicus (taxid:10116)]

 Score = 182 (69.1 bits), Expect = 9.9e-13, P = 9.9e-13
 Identities = 31/86 (36%), Positives = 54/86 (62%)

Query:     3 DVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPPQD 62
             +V   +F+Y+ +LQ+ G  K +F+E+  + +  FHYQ++  P++YV  +  NM+ YP QD
Sbjct:   486 EVAHTVFQYLKMLQKLGPEKRVFEEIQKIEDNEFHYQEQTDPVEYVENMCENMQLYPRQD 545

Query:    63 WLVGESLPSNFNPEIIQMTLKELSPK 88
             +L G+ L   + PE+I   L +L P+
Sbjct:   546 FLTGDQLLFEYKPEVIAEALNQLVPQ 571

GO:0004222 "metalloendopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1S6G2 NRD1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 182 (69.1 bits), Expect = 1.0e-12, P = 1.0e-12
 Identities = 32/86 (37%), Positives = 54/86 (62%)

Query:     3 DVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPPQD 62
             +V   +F+Y+ +LQ+ G  K IF+E+  + +  FHYQ++  P++YV  +  NM+ YP QD
Sbjct:   523 EVAHTVFQYLKMLQKLGPEKRIFEEIQKIEDNEFHYQEQTDPVEYVENMCENMQLYPLQD 582

Query:    63 WLVGESLPSNFNPEIIQMTLKELSPK 88
             +L G+ L   + PE+I   L +L P+
Sbjct:   583 FLTGDQLLFEYKPEVIAEALNQLVPQ 608

GO:0005739 "mitochondrion" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0004222 "metalloendopeptidase activity" evidence=IEA

UNIPROTKB|J9P4J0 NRD1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 182 (69.1 bits), Expect = 1.0e-12, P = 1.0e-12
 Identities = 32/86 (37%), Positives = 54/86 (62%)

Query:     3 DVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPPQD 62
             +V   +F+Y+ +LQ+ G  K IF+E+  + +  FHYQ++  P++YV  +  NM+ YP QD
Sbjct:   529 EVAHTVFQYLKMLQKLGPEKRIFEEIQKIEDNEFHYQEQTDPVEYVENMCENMQLYPLQD 588

Query:    63 WLVGESLPSNFNPEIIQMTLKELSPK 88
             +L G+ L   + PE+I   L +L P+
Sbjct:   589 FLTGDQLLFEYKPEVIAEALNQLVPQ 614

GO:0046872 "metal ion binding" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0004222 "metalloendopeptidase activity" evidence=IEA

MGI|MGI:1201386 Nrd1 "nardilysin, N-arginine dibasic convertase, NRD convertase 1" [Mus musculus (taxid:10090)]

 Score = 182 (69.1 bits), Expect = 1.0e-12, P = 1.0e-12
 Identities = 31/86 (36%), Positives = 54/86 (62%)

Query:     3 DVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPPQD 62
             +V   +F+Y+ +LQ+ G  K +F+E+  + +  FHYQ++  P++YV  +  NM+ YP QD
Sbjct:   531 EVAHTVFQYLKMLQKLGPEKRVFEEIQKIEDNEFHYQEQTDPVEYVENMCENMQLYPRQD 590

Query:    63 WLVGESLPSNFNPEIIQMTLKELSPK 88
             +L G+ L   + PE+I   L +L P+
Sbjct:   591 FLTGDQLLFEYKPEVIAEALNQLVPQ 616

GO:0003824 "catalytic activity" evidence=IEA

GO:0004222 "metalloendopeptidase activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005739 "mitochondrion" evidence=IDA

GO:0006508 "proteolysis" evidence=IEA

GO:0008233 "peptidase activity" evidence=ISO

GO:0008237 "metallopeptidase activity" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0051044 "positive regulation of membrane protein ectodomain proteolysis" evidence=ISO

GO:0052548 "regulation of endopeptidase activity" evidence=ISO

RGD|3210 Nrd1 "nardilysin 1" [Rattus norvegicus (taxid:10116)]

 Score = 182 (69.1 bits), Expect = 1.0e-12, P = 1.0e-12
 Identities = 31/86 (36%), Positives = 54/86 (62%)

Query:     3 DVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPPQD 62
             +V   +F+Y+ +LQ+ G  K +F+E+  + +  FHYQ++  P++YV  +  NM+ YP QD
Sbjct:   531 EVAHTVFQYLKMLQKLGPEKRVFEEIQKIEDNEFHYQEQTDPVEYVENMCENMQLYPRQD 590

Query:    63 WLVGESLPSNFNPEIIQMTLKELSPK 88
             +L G+ L   + PE+I   L +L P+
Sbjct:   591 FLTGDQLLFEYKPEVIAEALNQLVPQ 616

GO:0004222 "metalloendopeptidase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISO

GO:0006508 "proteolysis" evidence=IEA

GO:0008233 "peptidase activity" evidence=IDA

GO:0046872 "metal ion binding" evidence=IEA

GO:0051044 "positive regulation of membrane protein ectodomain proteolysis" evidence=ISO

GO:0052548 "regulation of endopeptidase activity" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	91
COG1025	937	COG1025, Ptr, Secreted/periplasmic Zn-dependent pe	6e-17
PRK15101	961	PRK15101, PRK15101, protease3; Provisional	6e-11

>gnl|CDD|223956 COG1025, Ptr, Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones]

 Score = 73.6 bits (181), Expect = 6e-17
 Identities = 33/90 (36%), Positives = 51/90 (56%)

Query: 2   QDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPPQ 61
             V+ L F+Y+NLL++ G  K+ FDEL  V ++ F Y  K  P+DYV  +A NME  P +
Sbjct: 345 DRVIALTFQYLNLLREKGIPKYTFDELQNVLDLDFRYPSKTRPMDYVSWLADNMEREPVE 404

Query: 62  DWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
             L    +   ++P+ IQ  L  ++P+  R
Sbjct: 405 HTLYASLVLPRYDPKAIQERLALMTPENAR 434

Length = 937

>gnl|CDD|185056 PRK15101, PRK15101, protease3; Provisional

 Score = 56.5 bits (137), Expect = 6e-11
 Identities = 28/89 (31%), Positives = 47/89 (52%)

Query: 3   DVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPPQD 62
            VV  +F Y+NLL++ G  K  FDEL+ V ++ F Y      +DY+  +A  M   P + 
Sbjct: 367 QVVAAIFSYLNLLREKGIDKSYFDELAHVLDLDFRYPSITRDMDYIEWLADTMLRVPVEH 426

Query: 63  WLVGESLPSNFNPEIIQMTLKELSPKTVR 91
            L    +   ++P+ I+  L E++P+  R
Sbjct: 427 TLDAPYIADRYDPKAIKARLAEMTPQNAR 455

Length = 961

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	91
KOG0959	974	consensus N-arginine dibasic convertase NRD1 and r	99.87
COG1025	937	Ptr Secreted/periplasmic Zn-dependent peptidases,	99.77
PRK15101	961	protease3; Provisional	99.56
PTZ00432	1119	falcilysin; Provisional	96.01

>KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]

Probab=99.87  E-value=1.7e-22  Score=158.36  Aligned_cols=91  Identities=44%  Similarity=0.915  Sum_probs=89.3

Q ss_pred             ChHHHHHHHHHHHHHHhCCCchHHHHHHHHhHhhccccCCCCChHHHHHHHHHhCCCCCcccccccCCCCCCCCHHHHHH
Q 034555            1 MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPPQDWLVGESLPSNFNPEIIQM   80 (91)
Q Consensus         1 ~~~Vi~~vF~yi~llk~~~~~~~~~~E~~~i~~~~F~f~~~~~~~~~~~~la~~m~~~p~edvL~~~~l~~~~d~~~i~~   80 (91)
                      +++|++++|+||++|+..|+++|+|+|++.+++..|+|+++.+|+++++++|.+|+.||++|||.|++++.+|||+.|++
T Consensus       349 ~~~ii~~~f~yi~~l~~~~~~~~i~~E~~~~~~~~Frf~~k~~p~~~~~~~~~nlq~~P~~~il~~~~ll~~~~p~~i~~  428 (974)
T KOG0959|consen  349 VDEIIGLVFNYIKLLQSAGPEKWIFKELQLISEVKFRFQDKEPPMEYASEIASNLQYYPVEDVLTGSYLLTEFDPDLIQE  428 (974)
T ss_pred             HHHHHHHHHHHHHHHHhcCchhHHHHHHHHhhhhheeecccCCcHHHHHHHHhhcccCChHHhhcchhhhhhcChHHHHH
Confidence            37999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhccCCCcCC
Q 034555           81 TLKELSPKTVR   91 (91)
Q Consensus        81 ~l~~l~p~N~r   91 (91)
                      +++.|+|.|+|
T Consensus       429 ~~~~L~p~n~~  439 (974)
T KOG0959|consen  429 VLSSLVPSNMR  439 (974)
T ss_pred             HHHhcCcccce
Confidence            99999999986

>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones]

Probab=99.77  E-value=7.6e-19  Score=137.01  Aligned_cols=91  Identities=36%  Similarity=0.660  Sum_probs=89.4

Q ss_pred             ChHHHHHHHHHHHHHHhCCCchHHHHHHHHhHhhccccCCCCChHHHHHHHHHhCCCCCcccccccCCCCCCCCHHHHHH
Q 034555            1 MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPPQDWLVGESLPSNFNPEIIQM   80 (91)
Q Consensus         1 ~~~Vi~~vF~yi~llk~~~~~~~~~~E~~~i~~~~F~f~~~~~~~~~~~~la~~m~~~p~edvL~~~~l~~~~d~~~i~~   80 (91)
                      |++||.++|+|+++++.+|++.|.|+|++.+.++.|+|.++.+|++++++++.+|+.+|+++++.+..++..||+..++.
T Consensus       344 ~~~VI~~~F~yl~~l~~~~~~~~~f~Elq~v~~l~f~y~~~t~~~~~~~~l~~~m~~~p~~~~~~~~~~~~~yd~~~~~~  423 (937)
T COG1025         344 YDRVIALTFQYLNLLREKGIPKYTFDELQNVLDLDFRYPSKTRPMDYVSWLADNMEREPVEHTLYASLVLPRYDPKAIQE  423 (937)
T ss_pred             HHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhcccccCChHHHHHHHHHhcccCChhhhhchhhcccccCHHHHHH
Confidence            57999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhccCCCcCC
Q 034555           81 TLKELSPKTVR   91 (91)
Q Consensus        81 ~l~~l~p~N~r   91 (91)
                      +|..|+|+|+|
T Consensus       424 ~l~~~~pen~R  434 (937)
T COG1025         424 RLALMTPENAR  434 (937)
T ss_pred             HHHhhCccceE
Confidence            99999999987

>PRK15101 protease3; Provisional

Probab=99.56  E-value=8.7e-15  Score=115.33  Aligned_cols=90  Identities=31%  Similarity=0.584  Sum_probs=87.5

Q ss_pred             hHHHHHHHHHHHHHHhCCCchHHHHHHHHhHhhccccCCCCChHHHHHHHHHhCCCCCcccccccCCCCCCCCHHHHHHH
Q 034555            2 QDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPPQDWLVGESLPSNFNPEIIQMT   81 (91)
Q Consensus         2 ~~Vi~~vF~yi~llk~~~~~~~~~~E~~~i~~~~F~f~~~~~~~~~~~~la~~m~~~p~edvL~~~~l~~~~d~~~i~~~   81 (91)
                      ++|++.+|++|+.|++.|+.+|.+++.+++...+|+|+++..+++++..+|.+|+.+|+++++.+.++++++|++.|+++
T Consensus       366 ~~v~~~i~~~i~~l~~~g~~~~el~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~  445 (961)
T PRK15101        366 DQVVAAIFSYLNLLREKGIDKSYFDELAHVLDLDFRYPSITRDMDYIEWLADTMLRVPVEHTLDAPYIADRYDPKAIKAR  445 (961)
T ss_pred             HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhccccCCCCCChHHHHHHHHHHhhhCCHHHheeCchhhhcCCHHHHHHH
Confidence            57999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhccCCCcCC
Q 034555           82 LKELSPKTVR   91 (91)
Q Consensus        82 l~~l~p~N~r   91 (91)
                      +++|+|+|++
T Consensus       446 ~~~l~~~n~~  455 (961)
T PRK15101        446 LAEMTPQNAR  455 (961)
T ss_pred             HhhcCHhHEE
Confidence            9999999974

>PTZ00432 falcilysin; Provisional

Probab=96.01  E-value=0.0034  Score=51.69  Aligned_cols=70  Identities=10%  Similarity=0.152  Sum_probs=58.7

Q ss_pred             hHHHHHHHHHHHHHHhCCCchHHHHHHHHhHhhccccCCCCC-----hHHHHHHHHHhCCC-CCcccccccCCCCCCC
Q 034555            2 QDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVP-----PIDYVVTVAANMET-YPPQDWLVGESLPSNF   73 (91)
Q Consensus         2 ~~Vi~~vF~yi~llk~~~~~~~~~~E~~~i~~~~F~f~~~~~-----~~~~~~~la~~m~~-~p~edvL~~~~l~~~~   73 (91)
                      ++|.+.|+++|+.+++.|+.+|.++  +.+.++.|++++...     ...++..++..+++ .+|.++|..+..+++.
T Consensus       466 ~ev~~~I~~~L~~l~~eGi~~eele--~a~~qlef~~rE~~~~~~p~gl~~~~~~~~~~~~g~dp~~~l~~~~~l~~l  541 (1119)
T PTZ00432        466 YTFEKVVLNALTKVVTEGFNKSAVE--ASLNNIEFVMKELNLGTYPKGLMLIFLMQSRLQYGKDPFEILRFEKLLNEL  541 (1119)
T ss_pred             HHHHHHHHHHHHHHHHhCCCHHHHH--HHHHHHHHHhhhccCCCCCcHHHHHHHHHHHHhcCCCHHHHHhhHHHHHHH
Confidence            4799999999999999999999997  778889999988753     58999999999876 8899988876655433

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	91
3qz2_A	990	The Structure Of Cysteine-Free Human Insulin Degrad		4e-13
3e4z_A	990	Crystal Structure Of Human Insulin Degrading Enzyme		4e-13
2wby_A	990	Crystal Structure Of Human Insulin-Degrading Enzyme		4e-13
3cww_A	990	Crystal Structure Of Ide-Bradykinin Complex Length		4e-13
3hgz_A	969	Crystal Structure Of Human Insulin-Degrading Enzyme		4e-13
3e4a_A	1019	Human Ide-Inhibitor Complex At 2.6 Angstrom Resolut		4e-13
2g47_A	990	Crystal Structure Of Human Insulin-Degrading Enzyme		2e-12
2jg4_A	990	Substrate-Free Ide Structure In Its Closed Conforma		2e-12
3p7l_A	978	Rat Insulin Degrading Enzyme (Insulysin) Length = 9		4e-12
3p7o_A	1019	Rat Insulin Degrading Enzyme (Insulysin) E111f Muta		4e-12
3tuv_A	1019	Crystal Structure Of Insulysin With Bound Atp Lengt		4e-12
1q2l_A	939	Crystal Structure Of Pitrilysin Length = 939		2e-07

>pdb|3QZ2|A Chain A, The Structure Of Cysteine-Free Human Insulin Degrading Enzyme Length = 990

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 52/91 (57%)
Query: 1   MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
           ++D++  +F+YI  L+  G  +W+F EL  +  V F ++DK  P  Y   +A  +  YP 
Sbjct: 358 VEDIILHMFQYIQKLRAEGPQEWVFQELKDLNAVAFRFKDKERPRGYTSKIAGILHYYPL 417
Query: 61  QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
           ++ L  E L   F P++I+M L +L P+ VR
Sbjct: 418 EEVLTAEYLLEEFRPDLIEMVLDKLRPENVR 448

>pdb|3E4Z|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme In Complex With Insulin-Like Growth Factor Ii Length = 990

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 52/91 (57%)
Query: 1   MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
           ++D++  +F+YI  L+  G  +W+F EL  +  V F ++DK  P  Y   +A  +  YP 
Sbjct: 358 VEDIILHMFQYIQKLRAEGPQEWVFQELKDLNAVAFRFKDKERPRGYTSKIAGILHYYPL 417
Query: 61  QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
           ++ L  E L   F P++I+M L +L P+ VR
Sbjct: 418 EEVLTAEYLLEEFRPDLIEMVLDKLRPENVR 448

>pdb|2WBY|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In Complex With Insulin Length = 990

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 52/91 (57%)
Query: 1   MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
           ++D++  +F+YI  L+  G  +W+F EL  +  V F ++DK  P  Y   +A  +  YP 
Sbjct: 358 VEDIILHMFQYIQKLRAEGPQEWVFQELKDLNAVAFRFKDKERPRGYTSKIAGILHYYPL 417
Query: 61  QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
           ++ L  E L   F P++I+M L +L P+ VR
Sbjct: 418 EEVLTAEYLLEEFRPDLIEMVLDKLRPENVR 448

>pdb|3CWW|A Chain A, Crystal Structure Of Ide-Bradykinin Complex Length = 990

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 52/91 (57%)
Query: 1   MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
           ++D++  +F+YI  L+  G  +W+F EL  +  V F ++DK  P  Y   +A  +  YP 
Sbjct: 358 VEDIILHMFQYIQKLRAEGPQEWVFQELKDLNAVAFRFKDKERPRGYTSKIAGILHYYPL 417
Query: 61  QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
           ++ L  E L   F P++I+M L +L P+ VR
Sbjct: 418 EEVLTAEYLLEEFRPDLIEMVLDKLRPENVR 448

>pdb|3HGZ|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In Complex With Amylin Length = 969

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 52/91 (57%)
Query: 1   MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
           ++D++  +F+YI  L+  G  +W+F EL  +  V F ++DK  P  Y   +A  +  YP 
Sbjct: 345 VEDIILHMFQYIQKLRAEGPQEWVFQELKDLNAVAFRFKDKERPRGYTSKIAGILHYYPL 404
Query: 61  QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
           ++ L  E L   F P++I+M L +L P+ VR
Sbjct: 405 EEVLTAEYLLEEFRPDLIEMVLDKLRPENVR 435

>pdb|3E4A|A Chain A, Human Ide-Inhibitor Complex At 2.6 Angstrom Resolution Length = 1019

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 52/91 (57%)
Query: 1   MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
           ++D++  +F+YI  L+  G  +W+F EL  +  V F ++DK  P  Y   +A  +  YP 
Sbjct: 387 VEDIILHMFQYIQKLRAEGPQEWVFQELKDLNAVAFRFKDKERPRGYTSKIAGILHYYPL 446
Query: 61  QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
           ++ L  E L   F P++I+M L +L P+ VR
Sbjct: 447 EEVLTAEYLLEEFRPDLIEMVLDKLRPENVR 477

>pdb|2G47|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In Complex With Amyloid-Beta (1-40) Length = 990

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 51/91 (56%)
Query: 1   MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
           ++D++  +F+YI  L+  G  +W+F E   +  V F ++DK  P  Y   +A  +  YP 
Sbjct: 358 VEDIILHMFQYIQKLRAEGPQEWVFQECKDLNAVAFRFKDKERPRGYTSKIAGILHYYPL 417
Query: 61  QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
           ++ L  E L   F P++I+M L +L P+ VR
Sbjct: 418 EEVLTAEYLLEEFRPDLIEMVLDKLRPENVR 448

>pdb|2JG4|A Chain A, Substrate-Free Ide Structure In Its Closed Conformation Length = 990

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 51/91 (56%)
Query: 1   MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
           ++D++  +F+YI  L+  G  +W+F E   +  V F ++DK  P  Y   +A  +  YP 
Sbjct: 358 VEDIILHMFQYIQKLRAEGPQEWVFQECKDLNAVAFRFKDKERPRGYTSKIAGILHYYPL 417
Query: 61  QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
           ++ L  E L   F P++I+M L +L P+ VR
Sbjct: 418 EEVLTAEYLLEEFRPDLIEMVLDKLRPENVR 448

>pdb|3P7L|A Chain A, Rat Insulin Degrading Enzyme (Insulysin) Length = 978

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 48/91 (52%)
Query: 1   MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
           ++D++  +F+YI  L+  G  +W+F E   +  V F ++DK  P  Y   +A  +  YP 
Sbjct: 346 VEDIILHMFQYIQKLRAEGPQEWVFQECKDLNAVAFRFKDKERPRGYTSKIAGKLHYYPL 405
Query: 61  QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
              L  E L   F P++I M L +L P+ VR
Sbjct: 406 NGVLTAEYLLEEFRPDLIDMVLDKLRPENVR 436

>pdb|3P7O|A Chain A, Rat Insulin Degrading Enzyme (Insulysin) E111f Mutant With Two Bound Peptides Length = 1019

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 48/91 (52%)
Query: 1   MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
           ++D++  +F+YI  L+  G  +W+F E   +  V F ++DK  P  Y   +A  +  YP 
Sbjct: 387 VEDIILHMFQYIQKLRAEGPQEWVFQECKDLNAVAFRFKDKERPRGYTSKIAGKLHYYPL 446
Query: 61  QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
              L  E L   F P++I M L +L P+ VR
Sbjct: 447 NGVLTAEYLLEEFRPDLIDMVLDKLRPENVR 477

>pdb|3TUV|A Chain A, Crystal Structure Of Insulysin With Bound Atp Length = 1019

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 48/91 (52%)
Query: 1   MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
           ++D++  +F+YI  L+  G  +W+F E   +  V F ++DK  P  Y   +A  +  YP 
Sbjct: 387 VEDIILHMFQYIQKLRAEGPQEWVFQECKDLNAVAFRFKDKERPRGYTSKIAGKLHYYPL 446
Query: 61  QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
              L  E L   F P++I M L +L P+ VR
Sbjct: 447 NGVLTAEYLLEEFRPDLIDMVLDKLRPENVR 477

>pdb|1Q2L|A Chain A, Crystal Structure Of Pitrilysin Length = 939

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 46/88 (52%)
Query: 4   VVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPPQDW 63
           VV  +F Y+NLL++ G  K  FDEL+ V ++ F Y      +DYV  +A  M   P +  
Sbjct: 345 VVAAIFSYLNLLREKGIDKQYFDELANVLDIDFRYPSITRDMDYVEWLADTMIRVPVEHT 404
Query: 64  LVGESLPSNFNPEIIQMTLKELSPKTVR 91
           L   ++   ++ + ++  L  ++P+  R
Sbjct: 405 LDAVNIADRYDAKAVKERLAMMTPQNAR 432
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	91
1q2l_A	939	Protease III; hydrolase; 2.20A {Escherichia coli s	1e-19
3cww_A	990	Insulysin, insulin-degrading enzyme, insulinase; A	2e-18

>1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Length = 939

 Score = 80.6 bits (198), Expect = 1e-19
 Identities = 26/91 (28%), Positives = 46/91 (50%)

Query: 1   MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
              VV  +F Y+NLL++ G  K  FDEL+ V ++ F Y      +DYV  +A  M   P 
Sbjct: 342 RDQVVAAIFSYLNLLREKGIDKQYFDELANVLDIDFRYPSITRDMDYVEWLADTMIRVPV 401

Query: 61  QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
           +  L   ++   ++ + ++  L  ++P+  R
Sbjct: 402 EHTLDAVNIADRYDAKAVKERLAMMTPQNAR 432

>3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ... Length = 990

 Score = 77.2 bits (189), Expect = 2e-18
 Identities = 31/91 (34%), Positives = 52/91 (57%)

Query: 1   MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
           ++D++  +F+YI  L+  G  +W+F EL  +  V F ++DK  P  Y   +A  +  YP 
Sbjct: 358 VEDIILHMFQYIQKLRAEGPQEWVFQELKDLNAVAFRFKDKERPRGYTSKIAGILHYYPL 417

Query: 61  QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
           ++ L  E L   F P++I+M L +L P+ VR
Sbjct: 418 EEVLTAEYLLEEFRPDLIEMVLDKLRPENVR 448

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	91
3cww_A	990	Insulysin, insulin-degrading enzyme, insulinase; A	99.13
1q2l_A	939	Protease III; hydrolase; 2.20A {Escherichia coli s	99.09
3ami_A	445	Zinc peptidase; alpha/beta, zinc binding, hydrolas	96.27
3amj_B	424	Zinc peptidase inactive subunit; alpha/beta, zinc	95.62
3gwb_A	434	Peptidase M16 inactive domain family protein; pept	93.45
3ih6_A	197	Putative zinc protease; bordetella pertussis toham	93.16
2fge_A	995	Atprep2;, zinc metalloprotease (insulinase family)	92.64
3d3y_A	425	Uncharacterized protein; APC29635, conserved prote	88.58
3eoq_A	406	Putative zinc protease; two similar domains of bet	84.31
3cx5_A	431	Cytochrome B-C1 complex subunit 1, mitochondrial;	82.94

>3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ...

Probab=99.13  E-value=2.1e-10  Score=89.02  Aligned_cols=89  Identities=34%  Similarity=0.715  Sum_probs=84.8

Q ss_pred             hHHHHHHHHHHHHHHhCCCchHHHHHHHHhHhhccccCCCCChHHHHHHHHHhCCCCCcccccccCCCCCCCCHHHHHHH
Q 034555            2 QDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPPQDWLVGESLPSNFNPEIIQMT   81 (91)
Q Consensus         2 ~~Vi~~vF~yi~llk~~~~~~~~~~E~~~i~~~~F~f~~~~~~~~~~~~la~~m~~~p~edvL~~~~l~~~~d~~~i~~~   81 (91)
                      ++|+.+++++|+.|++.|+.+|.++|.+.+....|++++..++.+++..++.+|+.+++++++.+...+..++++.|+++
T Consensus       359 ~~~~~~i~~~l~~l~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~t~~~i~~~  438 (990)
T 3cww_A          359 EDIILHMFQYIQKLRAEGPQEWVFQELKDLNAVAFRFKDKERPRGYTSKIAGILHYYPLEEVLTAEYLLEEFRPDLIEMV  438 (990)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHTTTSCGGGTTTTTTCCCCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcccCCcCCHHHHHHHHHHHHhhCCHHHHhccchhhhcCCHHHHHHH
Confidence            67999999999999999999999999999999999999888999999999999988999999999999999999999999


Q ss_pred             HhccCCCcC
Q 034555           82 LKELSPKTV   90 (91)
Q Consensus        82 l~~l~p~N~   90 (91)
                      ++.|.|+|+
T Consensus       439 ~~~l~~~~~  447 (990)
T 3cww_A          439 LDKLRPENV  447 (990)
T ss_dssp             HTTCSGGGC
T ss_pred             HHhcCHhHE
Confidence            999999986

>1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1

Probab=99.09  E-value=3.3e-10  Score=87.45  Aligned_cols=90  Identities=29%  Similarity=0.544  Sum_probs=85.3

Q ss_pred             hHHHHHHHHHHHHHHhCCCchHHHHHHHHhHhhccccCCCCChHHHHHHHHHhCCCCCcccccccCCCCCCCCHHHHHHH
Q 034555            2 QDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPPQDWLVGESLPSNFNPEIIQMT   81 (91)
Q Consensus         2 ~~Vi~~vF~yi~llk~~~~~~~~~~E~~~i~~~~F~f~~~~~~~~~~~~la~~m~~~p~edvL~~~~l~~~~d~~~i~~~   81 (91)
                      ++|+..++++|+.+++.|+.++.+++.+.....+|.++.+..+.+++..++.+|..+|+++++.+...+..++++.|+++
T Consensus       343 ~~~~~~i~~~l~~l~~~g~~~~el~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~vt~~~i~~~  422 (939)
T 1q2l_A          343 DQVVAAIFSYLNLLREKGIDKQYFDELANVLDIDFRYPSITRDMDYVEWLADTMIRVPVEHTLDAVNIADRYDAKAVKER  422 (939)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHTTSCGGGTTTTTTCCCCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcccccCCCChHHHHHHHHHHhhcCCHHHHhcCchhhhccCHHHHHHH
Confidence            67999999999999999999999999999999999999988999999999999988999999999999999999999999


Q ss_pred             HhccCCCcCC
Q 034555           82 LKELSPKTVR   91 (91)
Q Consensus        82 l~~l~p~N~r   91 (91)
                      +++|+|+|++
T Consensus       423 ~~~l~~~~~~  432 (939)
T 1q2l_A          423 LAMMTPQNAR  432 (939)
T ss_dssp             HHHCSGGGCE
T ss_pred             HHhcCHHHcE
Confidence            9999999863

>3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C

Probab=96.27  E-value=0.0051  Score=43.56  Aligned_cols=88  Identities=7%  Similarity=-0.056  Sum_probs=70.9

Q ss_pred             hHHHHHHHHHHHHHHhCCCchHHHHHHHHhHhhccccCCCCChHHHHHHHHHhCCC-CCcccccccCCCCCCCCHHHHHH
Q 034555            2 QDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMET-YPPQDWLVGESLPSNFNPEIIQM   80 (91)
Q Consensus         2 ~~Vi~~vF~yi~llk~~~~~~~~~~E~~~i~~~~F~f~~~~~~~~~~~~la~~m~~-~p~edvL~~~~l~~~~d~~~i~~   80 (91)
                      ++++..+++.|+.|++.|+.++-++..+.....+|.... ..+...+..++..... .++..+......++..+++.|++
T Consensus       325 ~~~~~~i~~~l~~l~~~g~t~~el~~ak~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~vt~~dv~~  403 (445)
T 3ami_A          325 AQLETDLRAQVRDIAAKGVTEAELSRVKSQMVAGKVYEQ-DSLMGQATQIGGLEVLGLSWRDDDRFYQQLRSVTAAEVKA  403 (445)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHTT-TSHHHHHHHHHHHHTTTCCTTHHHHHHHHHHTCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHh-hCHHHHHHHHHHHHHcCCChHHHHHHHHHHHcCCHHHHHH
Confidence            578999999999999999999999999988888887654 4566778888877654 46666666666778899999999


Q ss_pred             HHh-ccCCCcC
Q 034555           81 TLK-ELSPKTV   90 (91)
Q Consensus        81 ~l~-~l~p~N~   90 (91)
                      +++ +|+|+|+
T Consensus       404 ~a~~~l~~~~~  414 (445)
T 3ami_A          404 AAARLLTDDTL  414 (445)
T ss_dssp             HHHTTSCSTTE
T ss_pred             HHHHHcCcCCe
Confidence            996 6788774

>3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas}

Probab=95.62  E-value=0.02  Score=39.98  Aligned_cols=88  Identities=8%  Similarity=-0.003  Sum_probs=65.1

Q ss_pred             hHHHHHHHHHHHHHHhCCCchHHHHHHHHhHhhccccCCCCChHHHHHHHHHhCC-CCCcccccccCCCCCCCCHHHHHH
Q 034555            2 QDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANME-TYPPQDWLVGESLPSNFNPEIIQM   80 (91)
Q Consensus         2 ~~Vi~~vF~yi~llk~~~~~~~~~~E~~~i~~~~F~f~~~~~~~~~~~~la~~m~-~~p~edvL~~~~l~~~~d~~~i~~   80 (91)
                      +++++.+++.++.+++.|+.++-++..+.....++....+ .+...+..++.... ..+...+......+...+++.|++
T Consensus       317 ~~~~~~i~~~l~~l~~~~~t~~el~~ak~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vt~~dv~~  395 (424)
T 3amj_B          317 DEAVQVANDTLDAFLREGPTDAELQAAKDNLINGFALRLD-SNAKILGQVAVIGYYGLPLDYLDHYTERVQAVTVEQVRE  395 (424)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTSGGGGS-SHHHHHHHHHHHHHTTCCTTTTTSHHHHHHTCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhhhHhcC-CHHHHHHHHHHHHHcCCChhHHHHHHHHHHcCCHHHHHH
Confidence            5788999999999999999999999988887777775443 56667777765543 345444434344566788999999


Q ss_pred             HHh-ccCCCcC
Q 034555           81 TLK-ELSPKTV   90 (91)
Q Consensus        81 ~l~-~l~p~N~   90 (91)
                      +.+ +|+|+|+
T Consensus       396 ~a~~~l~~~~~  406 (424)
T 3amj_B          396 AFARHVKRENL  406 (424)
T ss_dssp             HHHHHCCGGGC
T ss_pred             HHHHhcCccce
Confidence            986 6888875

>3gwb_A Peptidase M16 inactive domain family protein; peptidase M16 family, PFL_5859, structural genomics, PSI-2, structure initiative; 1.90A {Pseudomonas fluorescens}

Probab=93.45  E-value=0.093  Score=36.54  Aligned_cols=88  Identities=11%  Similarity=0.067  Sum_probs=61.5

Q ss_pred             hHHHHHHHHHHHHHHhCCCchHHHHHHHHhHhhccccCCCCChHHHHHHHHHhCCC-CCcccccccCCCCCCCCHHHHHH
Q 034555            2 QDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMET-YPPQDWLVGESLPSNFNPEIIQM   80 (91)
Q Consensus         2 ~~Vi~~vF~yi~llk~~~~~~~~~~E~~~i~~~~F~f~~~~~~~~~~~~la~~m~~-~p~edvL~~~~l~~~~d~~~i~~   80 (91)
                      ++++..+.+.++-+++.|+.++-++..+.-...++.... ..+...+..++..... .+...+-.....+...+++.|++
T Consensus       324 ~~~~~~i~~~l~~l~~~~~~~~el~~ak~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vt~~dv~~  402 (434)
T 3gwb_A          324 EGTLKLVQDVFAEYLKNGPTQKELDDAKRELAGSFPLST-ASNADIVGQLGAMGFYNLPLSYLEDFMRQSQELTVEQVKA  402 (434)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC---CC-CCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhhhhhc-cCHHHHHHHHHHHHHcCCCccHHHHHHHHHHhCCHHHHHH
Confidence            578899999999999999999999999988888777544 3566777777665432 44433333334556678888888


Q ss_pred             HHh-ccCCCcC
Q 034555           81 TLK-ELSPKTV   90 (91)
Q Consensus        81 ~l~-~l~p~N~   90 (91)
                      +.+ +|+|+|+
T Consensus       403 ~a~~~l~~~~~  413 (434)
T 3gwb_A          403 AMNKHLNVDKM  413 (434)
T ss_dssp             HHHHHCCGGGC
T ss_pred             HHHHhcChhhE
Confidence            887 6788764

>3ih6_A Putative zinc protease; bordetella pertussis tohama I, struc genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 2.15A {Bordetella pertussis} PDB: 3ivl_A

Probab=93.16  E-value=0.028  Score=35.43  Aligned_cols=88  Identities=8%  Similarity=-0.005  Sum_probs=62.6

Q ss_pred             hHHHHHHHHHHHHHHhCCCchHHHHHHHHhHhhccccCCCCChHHHHHHHHHhCCCCCcccccccCCCCCCCCHHHHHHH
Q 034555            2 QDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPPQDWLVGESLPSNFNPEIIQMT   81 (91)
Q Consensus         2 ~~Vi~~vF~yi~llk~~~~~~~~~~E~~~i~~~~F~f~~~~~~~~~~~~la~~m~~~p~edvL~~~~l~~~~d~~~i~~~   81 (91)
                      ++++..+.+-|+-+++.|+.+.-++..+.....++.+. ..++...+..++.....-++..+......+...+++.|+++
T Consensus        98 ~~~~~~i~~~l~~l~~~~it~~el~~ak~~~~~~~~~~-~~~~~~~a~~l~~~~~~g~~~~~~~~~~~i~~vT~~dv~~~  176 (197)
T 3ih6_A           98 DKALQTLTATLESLSSKPFSQEELERARSKWLTAWQQT-YADPEKVGVALSEAIASGDWRLFFLQRDRVREAKLDDVQRA  176 (197)
T ss_dssp             HHHHHHHHHHHHCTTTSCCCHHHHHHHHHHHHHHHHHH-HTSHHHHHHHHHHHHHTTCTTHHHHHHHHHHTCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCHHHHHHH
Confidence            56888999999999999999999999888877777643 34556677777766543233333333345567788888888


Q ss_pred             Hh-ccCCCcC
Q 034555           82 LK-ELSPKTV   90 (91)
Q Consensus        82 l~-~l~p~N~   90 (91)
                      .+ +|+|+|.
T Consensus       177 a~~~l~~~~~  186 (197)
T 3ih6_A          177 AVAYLVRSNR  186 (197)
T ss_dssp             HHHHSSGGGC
T ss_pred             HHHhCCccCe
Confidence            86 6777764

>2fge_A Atprep2;, zinc metalloprotease (insulinase family); peptidasome, protease-peptide complex, hydrolase, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1

Probab=92.64  E-value=0.093  Score=40.93  Aligned_cols=87  Identities=11%  Similarity=0.127  Sum_probs=60.4

Q ss_pred             hHHHHHHHHHHHHHHhCCCchHHHHHHHHhHhhccccCCC-CChH--HHHHHHHHhCC-CCCcccccccCCCCCCCCH--
Q 034555            2 QDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDK-VPPI--DYVVTVAANME-TYPPQDWLVGESLPSNFNP--   75 (91)
Q Consensus         2 ~~Vi~~vF~yi~llk~~~~~~~~~~E~~~i~~~~F~f~~~-~~~~--~~~~~la~~m~-~~p~edvL~~~~l~~~~d~--   75 (91)
                      ++++..+++.|+.+++.|+.++.++..+.-.+..|..... ..|.  .++..++.... ..++...+.....+..+++  
T Consensus       374 ~~~~~~i~~~l~~l~~~g~~~~el~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  453 (995)
T 2fge_A          374 QKVEELIMDTLKKLAEEGFDNDAVEASMNTIEFSLRENNTGSFPRGLSLMLQSISKWIYDMDPFEPLKYTEPLKALKTRI  453 (995)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCTTSCHHHHHHHHHHHHHTTTSCSSGGGCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHhcCCChHHHhhhHHHHHHHHHHh
Confidence            6899999999999999999999999877766655554332 2344  56677665543 3466666665555666666  


Q ss_pred             --H----HHHHHHhc-cCCC
Q 034555           76 --E----IIQMTLKE-LSPK   88 (91)
Q Consensus        76 --~----~i~~~l~~-l~p~   88 (91)
                        +    .|+++++. |.++
T Consensus       454 ~~~~~~~~v~~~~~~~l~~~  473 (995)
T 2fge_A          454 AEEGSKAVFSPLIEKLILNN  473 (995)
T ss_dssp             HHHCHHHHHHHHHHHHTTTC
T ss_pred             cCCccHHHHHHHHHHHhcCC
Confidence              6    68888764 6543

>3d3y_A Uncharacterized protein; APC29635, conserved protein, enterococcus faecalis V583, STR genomics, PSI-2, protein structure initiative; 1.95A {Enterococcus faecalis}

Probab=88.58  E-value=0.23  Score=34.31  Aligned_cols=86  Identities=9%  Similarity=-0.074  Sum_probs=56.0

Q ss_pred             hHHHHHHHHHHHHHHhCCCchHHHHHHHHhHhhccccCCCCChHHHHHHHHHhCCCC-CcccccccCCCCCCCCHHHHHH
Q 034555            2 QDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETY-PPQDWLVGESLPSNFNPEIIQM   80 (91)
Q Consensus         2 ~~Vi~~vF~yi~llk~~~~~~~~~~E~~~i~~~~F~f~~~~~~~~~~~~la~~m~~~-p~edvL~~~~l~~~~d~~~i~~   80 (91)
                      +++++.+.+.++.+++.|+.++-++..+.....++.... ..+...+..++.....+ .+.++......+...+++.|++
T Consensus       327 ~~~~~~~~~~l~~l~~~~~~~~el~~ak~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~vt~edv~~  405 (425)
T 3d3y_A          327 NQVLRLISTELENIRLGKIRELEIEQTKAMLKNQYILAL-DNAGAWLEKEYLNELMPQTMLTAEEWIARINAVTIPEIQE  405 (425)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHT-SCHHHHHHHHHHHHHSTTSCCCHHHHHHHHHHCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhHHhcc-cCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhCCHHHHHH
Confidence            578899999999999999999999999888777777644 35566666666554331 1222222223344456666666


Q ss_pred             HHhccCCC
Q 034555           81 TLKELSPK   88 (91)
Q Consensus        81 ~l~~l~p~   88 (91)
                      +.+.+.|+
T Consensus       406 ~a~~~~~~  413 (425)
T 3d3y_A          406 VAKRLELQ  413 (425)
T ss_dssp             HHHHCEEE
T ss_pred             HHHhccCc
Confidence            66655444

>3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus}

Probab=84.31  E-value=0.57  Score=32.47  Aligned_cols=87  Identities=8%  Similarity=0.056  Sum_probs=58.1

Q ss_pred             hHHHHHHHHHHHHHHhCCCchHHHHHHHHhHhhccccCCCCChHHHHHHHHHhCCC-CCcccccccCCCCCCCCHHHHHH
Q 034555            2 QDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMET-YPPQDWLVGESLPSNFNPEIIQM   80 (91)
Q Consensus         2 ~~Vi~~vF~yi~llk~~~~~~~~~~E~~~i~~~~F~f~~~~~~~~~~~~la~~m~~-~p~edvL~~~~l~~~~d~~~i~~   80 (91)
                      ++++..+.+.|+.+++.|+.+.-++..+.....++... ..++...+..++..... -++..+-.-...+...+++.|++
T Consensus       308 ~~~~~~i~~~l~~l~~~~~t~~el~~ak~~l~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vt~~dv~~  386 (406)
T 3eoq_A          308 GEVLAVLQEELDRLGREGVGEEEVERAKTPLATGLVFA-GETPMQRLFHLGMEYLYTGRYLSLEEVKARVQRVTSREVNA  386 (406)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH-TTSHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhCCHHHHHH
Confidence            57899999999999999999998988888777777643 33455666666655432 23322222222345567788888


Q ss_pred             HHh-ccCCCc
Q 034555           81 TLK-ELSPKT   89 (91)
Q Consensus        81 ~l~-~l~p~N   89 (91)
                      +.+ +|+|++
T Consensus       387 ~a~~~l~~~~  396 (406)
T 3eoq_A          387 LLERGFLEKG  396 (406)
T ss_dssp             HHHTTTTTSC
T ss_pred             HHHHhcCccc
Confidence            876 456665

>3cx5_A Cytochrome B-C1 complex subunit 1, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1p84_A* 2ibz_A* 1kb9_A* 3cxh_A* 1ezv_A* 1kyo_A*

Probab=82.94  E-value=1.1  Score=30.98  Aligned_cols=87  Identities=8%  Similarity=0.024  Sum_probs=57.5

Q ss_pred             hHHHHHHHHHHHHHHhCCCchHHHHHHHHhHhhccccC-CCCChHHHHHHHHHhCC--CCCcccccccCCCCCCCCHHHH
Q 034555            2 QDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQ-DKVPPIDYVVTVAANME--TYPPQDWLVGESLPSNFNPEII   78 (91)
Q Consensus         2 ~~Vi~~vF~yi~llk~~~~~~~~~~E~~~i~~~~F~f~-~~~~~~~~~~~la~~m~--~~p~edvL~~~~l~~~~d~~~i   78 (91)
                      +++++.+.+.++-+++ |+.++-++..+.....++..+ ....+...+..++..+.  ..+ .+.-.-...+...+++.|
T Consensus       315 ~~~~~~~~~~l~~l~~-~~t~~el~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~i~~vt~~dv  392 (431)
T 3cx5_A          315 DDLIHFTLKQWNRLTI-SVTDTEVERAKSLLKLQLGQLYESGNPVNDANLLGAEVLIKGSK-LSLGEAFKKIDAITVKDV  392 (431)
T ss_dssp             HHHHHHHHHHHHHHHH-TCCHHHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHHHHHHHSSC-CCHHHHHHHHHHCCHHHH
T ss_pred             HHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHHHHhcCCC-CCHHHHHHHHhcCCHHHH
Confidence            5788999999999998 999999999888777777751 23456677777766532  121 122111223456678888


Q ss_pred             HHHHh-ccCCCcC
Q 034555           79 QMTLK-ELSPKTV   90 (91)
Q Consensus        79 ~~~l~-~l~p~N~   90 (91)
                      +++.+ ++.|+|.
T Consensus       393 ~~~a~~~l~~~~~  405 (431)
T 3cx5_A          393 KAWAGKRLWDQDI  405 (431)
T ss_dssp             HHHHHHHTTTCCC
T ss_pred             HHHHHHHcccCCc
Confidence            88775 4666653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	91
d1q2la3	240	d.185.1.1 (A:264-503) Protease III {Escherichia co	6e-20

>d1q2la3 d.185.1.1 (A:264-503) Protease III {Escherichia coli [TaxId: 562]} Length = 240

class: Alpha and beta proteins (a+b)
fold: LuxS/MPP-like metallohydrolase
superfamily: LuxS/MPP-like metallohydrolase
family: MPP-like
domain: Protease III
species: Escherichia coli [TaxId: 562]

 Score = 78.1 bits (192), Expect = 6e-20
 Identities = 26/90 (28%), Positives = 46/90 (51%)

Query: 2   QDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPPQ 61
             VV  +F Y+NLL++ G  K  FDEL+ V ++ F Y      +DYV  +A  M   P +
Sbjct: 103 DQVVAAIFSYLNLLREKGIDKQYFDELANVLDIDFRYPSITRDMDYVEWLADTMIRVPVE 162

Query: 62  DWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
             L   ++   ++ + ++  L  ++P+  R
Sbjct: 163 HTLDAVNIADRYDAKAVKERLAMMTPQNAR 192

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	91
d1q2la3	240	Protease III {Escherichia coli [TaxId: 562]}	99.96

>d1q2la3 d.185.1.1 (A:264-503) Protease III {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: LuxS/MPP-like metallohydrolase
superfamily: LuxS/MPP-like metallohydrolase
family: MPP-like
domain: Protease III
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=3e-29  Score=169.75  Aligned_cols=91  Identities=29%  Similarity=0.532  Sum_probs=89.1

Q ss_pred             ChHHHHHHHHHHHHHHhCCCchHHHHHHHHhHhhccccCCCCChHHHHHHHHHhCCCCCcccccccCCCCCCCCHHHHHH
Q 034555            1 MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPPQDWLVGESLPSNFNPEIIQM   80 (91)
Q Consensus         1 ~~~Vi~~vF~yi~llk~~~~~~~~~~E~~~i~~~~F~f~~~~~~~~~~~~la~~m~~~p~edvL~~~~l~~~~d~~~i~~   80 (91)
                      +++|++++|+||++||++|+++|+|+|++++++++|+|+++.+|.++|+.+|.+|+.|||+|+|+|++++++||++.|++
T Consensus       102 ~~~Ii~~vf~yi~~lk~~~~~~~~~~e~~~i~~~~F~~~e~~~~~~~v~~la~~m~~~p~e~vl~~~~~~~~~d~~~i~~  181 (240)
T d1q2la3         102 RDQVVAAIFSYLNLLREKGIDKQYFDELANVLDIDFRYPSITRDMDYVEWLADTMIRVPVEHTLDAVNIADRYDAKAVKE  181 (240)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHTTSCGGGTTTTTTCCCCCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHhhhhhhhccccHHHHHHHHHHhhcccCHHHheecchhhhhcCHHHHHH
Confidence            36899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhccCCCcCC
Q 034555           81 TLKELSPKTVR   91 (91)
Q Consensus        81 ~l~~l~p~N~r   91 (91)
                      +|++|||+|||
T Consensus       182 ~L~~L~p~N~~  192 (240)
T d1q2la3         182 RLAMMTPQNAR  192 (240)
T ss_dssp             HHHHCSGGGCE
T ss_pred             HHhhcChhhEE
Confidence            99999999996