Query 034568
Match_columns 91
No_of_seqs 143 out of 1254
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 06:23:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034568.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034568hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ys8_A RAB-related GTP-binding 99.9 1.2E-21 4E-26 117.6 8.2 67 22-89 15-81 (90)
2 2dn9_A DNAJ homolog subfamily 99.8 3.1E-21 1.1E-25 112.9 6.9 58 32-89 5-62 (79)
3 2yua_A Williams-beuren syndrom 99.8 6.8E-21 2.3E-25 115.9 6.7 59 31-89 14-72 (99)
4 1hdj_A Human HSP40, HDJ-1; mol 99.8 9.9E-21 3.4E-25 110.3 7.1 55 34-89 3-57 (77)
5 2ctr_A DNAJ homolog subfamily 99.8 1.2E-20 4.2E-25 112.6 7.4 58 32-90 5-62 (88)
6 2ctp_A DNAJ homolog subfamily 99.8 9.8E-21 3.4E-25 110.5 6.6 57 32-89 5-61 (78)
7 2cug_A Mkiaa0962 protein; DNAJ 99.8 1.8E-20 6.3E-25 111.8 7.2 58 31-89 14-71 (88)
8 2ctw_A DNAJ homolog subfamily 99.8 2.4E-20 8.1E-25 115.4 7.6 59 31-89 14-72 (109)
9 2ctq_A DNAJ homolog subfamily 99.8 1.4E-20 4.9E-25 116.8 6.6 59 31-89 17-75 (112)
10 2och_A Hypothetical protein DN 99.8 1.8E-20 6.3E-25 108.2 6.6 57 30-89 4-60 (73)
11 2ej7_A HCG3 gene; HCG3 protein 99.8 2.3E-20 7.7E-25 109.8 6.9 59 32-90 7-66 (82)
12 1iur_A KIAA0730 protein; DNAJ 99.8 8.7E-21 3E-25 113.6 4.4 57 33-89 15-72 (88)
13 1wjz_A 1700030A21RIK protein; 99.8 1.7E-20 5.7E-25 112.8 5.4 60 31-90 13-78 (94)
14 2dmx_A DNAJ homolog subfamily 99.8 4.4E-20 1.5E-24 110.8 6.6 58 32-89 7-65 (92)
15 2qwo_B Putative tyrosine-prote 99.8 8E-21 2.7E-25 114.6 3.1 56 34-89 33-91 (92)
16 2lgw_A DNAJ homolog subfamily 99.8 7.3E-20 2.5E-24 111.6 7.2 56 34-89 2-58 (99)
17 2o37_A Protein SIS1; HSP40, J- 99.8 6.7E-20 2.3E-24 110.2 6.1 57 30-89 4-60 (92)
18 2qsa_A DNAJ homolog DNJ-2; J-d 99.8 6E-20 2E-24 113.3 5.7 60 30-89 11-74 (109)
19 1bq0_A DNAJ, HSP40; chaperone, 99.8 1.5E-20 5.1E-25 115.1 3.0 58 33-90 2-59 (103)
20 1faf_A Large T antigen; J doma 99.8 5.2E-20 1.8E-24 108.1 4.4 52 34-89 11-64 (79)
21 3ag7_A Putative uncharacterize 99.8 5.2E-20 1.8E-24 113.6 3.3 62 29-91 36-104 (106)
22 2guz_A Mitochondrial import in 99.8 1.9E-19 6.4E-24 103.7 4.8 54 33-90 13-67 (71)
23 3apq_A DNAJ homolog subfamily 99.8 4.2E-19 1.5E-23 118.5 5.9 56 34-89 2-57 (210)
24 2l6l_A DNAJ homolog subfamily 99.8 8.3E-19 2.9E-23 113.9 6.4 58 32-89 8-71 (155)
25 3hho_A CO-chaperone protein HS 99.8 1.4E-18 4.7E-23 115.2 6.2 58 32-89 2-66 (174)
26 3bvo_A CO-chaperone protein HS 99.7 2.6E-18 9E-23 116.6 7.1 61 29-89 38-105 (207)
27 1n4c_A Auxilin; four helix bun 99.7 8.7E-19 3E-23 116.9 4.5 60 30-89 113-175 (182)
28 1gh6_A Large T antigen; tumor 99.7 3.2E-19 1.1E-23 111.3 0.8 53 33-89 7-61 (114)
29 1fpo_A HSC20, chaperone protei 99.7 5.2E-18 1.8E-22 112.2 5.1 55 35-89 2-63 (171)
30 3lz8_A Putative chaperone DNAJ 99.7 7.9E-19 2.7E-23 126.0 0.0 61 29-90 23-83 (329)
31 2pf4_E Small T antigen; PP2A, 99.7 8.6E-18 2.9E-22 111.5 0.3 53 33-89 10-64 (174)
32 3uo3_A J-type CO-chaperone JAC 99.6 1.3E-16 4.3E-21 106.4 3.2 56 31-89 8-70 (181)
33 3apo_A DNAJ homolog subfamily 99.6 1.5E-16 5.2E-21 122.6 1.1 60 30-89 17-76 (780)
34 2guz_B Mitochondrial import in 99.4 7.5E-13 2.6E-17 75.0 5.2 51 34-88 4-57 (65)
35 2y4t_A DNAJ homolog subfamily 98.9 8.2E-10 2.8E-14 77.7 5.3 59 32-90 380-441 (450)
36 2pzi_A Probable serine/threoni 94.7 0.033 1.1E-06 42.3 4.4 50 29-86 624-675 (681)
37 1qqr_A Streptokinase domain B; 46.6 9.6 0.00033 23.9 1.7 31 36-66 34-64 (138)
38 1ug2_A 2610100B20RIK gene prod 45.2 14 0.00047 21.7 2.1 23 45-67 67-89 (95)
39 2lxi_A RNA-binding protein 10; 40.1 25 0.00087 19.2 2.7 20 40-59 7-26 (91)
40 3cxb_A Protein SIFA; SIFA, SKI 31.7 73 0.0025 22.6 4.4 30 53-82 45-74 (336)
41 1iqt_A AUF1, heterogeneous nuc 30.3 49 0.0017 16.8 2.8 20 40-59 5-24 (75)
42 2lr8_A CAsp8-associated protei 34.5 12 0.00041 20.7 0.0 22 45-66 47-68 (70)
43 2ql2_B Neurod1, neurogenic dif 27.6 33 0.0011 18.0 1.7 16 75-90 12-27 (60)
44 1mdy_A Protein (MYOD BHLH doma 27.6 45 0.0015 18.0 2.3 16 75-90 22-37 (68)
45 2i4r_A V-type ATP synthase sub 26.8 43 0.0015 19.5 2.3 26 36-61 23-51 (102)
46 2ov6_A V-type ATP synthase sub 24.7 33 0.0011 19.8 1.5 26 36-61 14-42 (101)
47 1vq8_S 50S ribosomal protein L 24.6 45 0.0016 18.9 2.0 20 39-58 26-45 (85)
48 2hzc_A Splicing factor U2AF 65 23.7 73 0.0025 16.6 2.8 20 40-59 12-31 (87)
49 2zjr_Q 50S ribosomal protein L 22.1 53 0.0018 19.0 2.0 20 39-58 26-45 (95)
50 2o70_A OHCU decarboxylase; URI 21.9 1.2E+02 0.0042 19.2 3.9 46 41-86 34-113 (174)
51 2mss_A Protein (musashi1); RNA 21.8 59 0.002 16.5 2.1 18 41-58 6-23 (75)
52 2ket_A Cathelicidin-6; antimic 21.7 64 0.0022 14.0 2.8 17 49-65 4-20 (27)
53 3r8s_T 50S ribosomal protein L 21.6 56 0.0019 18.8 2.0 20 39-58 31-50 (93)
54 1xs0_A Inhibitor of vertebrate 21.2 42 0.0014 20.8 1.5 33 36-68 93-127 (136)
55 3j21_T 50S ribosomal protein L 21.1 59 0.002 18.5 2.0 20 39-58 27-46 (86)
56 3o7i_A OHCU decarboxylase; lya 20.8 1.1E+02 0.0039 19.7 3.6 43 44-86 60-134 (189)
57 1r4v_A Hypothetical protein AQ 20.4 1.7E+02 0.0058 18.8 4.2 21 51-71 138-158 (171)
58 1xsv_A Hypothetical UPF0122 pr 20.4 65 0.0022 18.6 2.2 44 39-88 50-93 (113)
No 1
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.86 E-value=1.2e-21 Score=117.62 Aligned_cols=67 Identities=24% Similarity=0.358 Sum_probs=59.1
Q ss_pred chhhhhhhhcCCCCchhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhcC
Q 034568 22 VNFDFLSLLAKPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQGKRS 89 (91)
Q Consensus 22 ~~~~~~~~~~~~~~~y~iLgl~~~a~~~~Ikkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~~ 89 (91)
..+.....+....++|+||||+++++.++||++||++++++|||+++++. +.++|++|++||++|++
T Consensus 15 ~~~~~~~~~~~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~-~~~~f~~i~~Ay~~L~d 81 (90)
T 2ys8_A 15 EQADAIRRIRNSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPG-SEDAFKAVVNARTALLK 81 (90)
T ss_dssp HHHHHHHHHHTCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTT-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcc-HHHHHHHHHHHHHHHCC
Confidence 34555556667899999999999999999999999999999999998754 88999999999999986
No 2
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.84 E-value=3.1e-21 Score=112.86 Aligned_cols=58 Identities=40% Similarity=0.684 Sum_probs=54.2
Q ss_pred CCCCchhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhcC
Q 034568 32 KPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQGKRS 89 (91)
Q Consensus 32 ~~~~~y~iLgl~~~a~~~~Ikkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~~ 89 (91)
...++|+||||+++++.++||++||++++++|||++++.+.+.+.|+.|++||++|++
T Consensus 5 ~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d 62 (79)
T 2dn9_A 5 SSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSD 62 (79)
T ss_dssp CCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHS
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCC
Confidence 4679999999999999999999999999999999998755689999999999999987
No 3
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=6.8e-21 Score=115.92 Aligned_cols=59 Identities=31% Similarity=0.494 Sum_probs=54.9
Q ss_pred cCCCCchhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhcC
Q 034568 31 AKPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQGKRS 89 (91)
Q Consensus 31 ~~~~~~y~iLgl~~~a~~~~Ikkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~~ 89 (91)
....++|+||||+++++.++||++||++++++|||++++.+.+.++|+.|++||++|+|
T Consensus 14 ~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d 72 (99)
T 2yua_A 14 YSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGS 72 (99)
T ss_dssp SCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTS
T ss_pred CCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCC
Confidence 35679999999999999999999999999999999998666689999999999999987
No 4
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.83 E-value=9.9e-21 Score=110.27 Aligned_cols=55 Identities=45% Similarity=0.770 Sum_probs=51.9
Q ss_pred CCchhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhcC
Q 034568 34 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQGKRS 89 (91)
Q Consensus 34 ~~~y~iLgl~~~a~~~~Ikkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~~ 89 (91)
.++|+||||+++++.++||++||++++++|||+++++. +.+.|+.|++||++|++
T Consensus 3 ~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~-~~~~f~~i~~Ay~~L~d 57 (77)
T 1hdj_A 3 KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPG-AEEKFKEIAEAYDVLSD 57 (77)
T ss_dssp CCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTT-HHHHHHHHHHHHHHTTC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcc-HHHHHHHHHHHHHHHCC
Confidence 58999999999999999999999999999999998754 88999999999999987
No 5
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=1.2e-20 Score=112.55 Aligned_cols=58 Identities=40% Similarity=0.676 Sum_probs=53.8
Q ss_pred CCCCchhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhcCC
Q 034568 32 KPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQGKRSL 90 (91)
Q Consensus 32 ~~~~~y~iLgl~~~a~~~~Ikkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~~~ 90 (91)
...++|+||||+++++.++||++||++++++|||+++.+ .+.+.|+.|++||++|++-
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~a~~~f~~i~~Ay~~L~d~ 62 (88)
T 2ctr_A 5 SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSP-DAEAKFREIAEAYETLSDA 62 (88)
T ss_dssp CCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSH-HHHHHHHHHHHHHHHHHSS
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCh-HHHHHHHHHHHHHHHHCCH
Confidence 467999999999999999999999999999999999864 4899999999999999873
No 6
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=9.8e-21 Score=110.52 Aligned_cols=57 Identities=42% Similarity=0.690 Sum_probs=53.4
Q ss_pred CCCCchhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhcC
Q 034568 32 KPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQGKRS 89 (91)
Q Consensus 32 ~~~~~y~iLgl~~~a~~~~Ikkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~~ 89 (91)
...++|+||||+++++.++||++||++++++|||+++.+ .+.+.|+.|++||++|++
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~~~~f~~i~~Ay~~L~d 61 (78)
T 2ctp_A 5 SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAP-GATEAFKAIGTAYAVLSN 61 (78)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSH-HHHHHHHHHHHHHHHHTS
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-cHHHHHHHHHHHHHHHCC
Confidence 467999999999999999999999999999999999875 488999999999999987
No 7
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.83 E-value=1.8e-20 Score=111.79 Aligned_cols=58 Identities=40% Similarity=0.663 Sum_probs=53.7
Q ss_pred cCCCCchhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhcC
Q 034568 31 AKPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQGKRS 89 (91)
Q Consensus 31 ~~~~~~y~iLgl~~~a~~~~Ikkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~~ 89 (91)
....++|+||||+++++.++||++||++++++|||+++++. +.+.|+.|++||++|++
T Consensus 14 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~-~~~~f~~i~~Ay~~L~d 71 (88)
T 2cug_A 14 ALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPG-AEDRFIQISKAYEILSN 71 (88)
T ss_dssp SSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTT-HHHHHHHHHHHHHHHHS
T ss_pred cCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChh-HHHHHHHHHHHHHHHCC
Confidence 34679999999999999999999999999999999998754 88999999999999986
No 8
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.82 E-value=2.4e-20 Score=115.36 Aligned_cols=59 Identities=37% Similarity=0.620 Sum_probs=55.0
Q ss_pred cCCCCchhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhcC
Q 034568 31 AKPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQGKRS 89 (91)
Q Consensus 31 ~~~~~~y~iLgl~~~a~~~~Ikkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~~ 89 (91)
....++|+||||+++++.++||++||++++++|||++++.+.+.+.|+.|++||++|++
T Consensus 14 ~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d 72 (109)
T 2ctw_A 14 TSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTD 72 (109)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcC
Confidence 34679999999999999999999999999999999998766789999999999999987
No 9
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=1.4e-20 Score=116.79 Aligned_cols=59 Identities=29% Similarity=0.437 Sum_probs=54.6
Q ss_pred cCCCCchhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhcC
Q 034568 31 AKPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQGKRS 89 (91)
Q Consensus 31 ~~~~~~y~iLgl~~~a~~~~Ikkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~~ 89 (91)
....++|+||||+++++.++||++||++++++|||++++.+.+.++|+.|++||++|+|
T Consensus 17 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d 75 (112)
T 2ctq_A 17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTN 75 (112)
T ss_dssp CCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHS
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCC
Confidence 35689999999999999999999999999999999998655689999999999999987
No 10
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.82 E-value=1.8e-20 Score=108.19 Aligned_cols=57 Identities=37% Similarity=0.733 Sum_probs=51.6
Q ss_pred hcCCCCchhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhcC
Q 034568 30 LAKPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQGKRS 89 (91)
Q Consensus 30 ~~~~~~~y~iLgl~~~a~~~~Ikkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~~ 89 (91)
+....++|+||||+++++.++||++||++++++|||++++. .+.|+.|++||++|++
T Consensus 4 m~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~---~~~f~~i~~Ay~~L~d 60 (73)
T 2och_A 4 MVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG---AEQFKQISQAYEVLSD 60 (73)
T ss_dssp --CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC---HHHHHHHHHHHHHHTS
T ss_pred ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH---HHHHHHHHHHHHHHCC
Confidence 44678999999999999999999999999999999999873 5899999999999987
No 11
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.82 E-value=2.3e-20 Score=109.82 Aligned_cols=59 Identities=41% Similarity=0.742 Sum_probs=54.1
Q ss_pred CCCCchhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHHhcCC
Q 034568 32 KPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDR-DCATSRFQEINEAYQGKRSL 90 (91)
Q Consensus 32 ~~~~~y~iLgl~~~a~~~~Ikkayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~~L~~~ 90 (91)
...++|+||||+++++.++||++||++++++|||+++.. +.+.+.|+.|++||++|++-
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~ 66 (82)
T 2ej7_A 7 GMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDA 66 (82)
T ss_dssp SSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSST
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCH
Confidence 457999999999999999999999999999999999875 35889999999999999974
No 12
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.82 E-value=8.7e-21 Score=113.64 Aligned_cols=57 Identities=28% Similarity=0.473 Sum_probs=52.7
Q ss_pred CCCchhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHHhcC
Q 034568 33 PKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDR-DCATSRFQEINEAYQGKRS 89 (91)
Q Consensus 33 ~~~~y~iLgl~~~a~~~~Ikkayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~~L~~ 89 (91)
..++|+||||+++++.++||++||++++++|||++++. +.+.++|+.|++||++|++
T Consensus 15 ~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~ 72 (88)
T 1iur_A 15 LKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEK 72 (88)
T ss_dssp HHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence 45899999999999999999999999999999999875 4589999999999999986
No 13
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.81 E-value=1.7e-20 Score=112.82 Aligned_cols=60 Identities=32% Similarity=0.537 Sum_probs=54.2
Q ss_pred cCCCCchhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCc------hHHHHHHHHHHHHHHHhcCC
Q 034568 31 AKPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDR------DCATSRFQEINEAYQGKRSL 90 (91)
Q Consensus 31 ~~~~~~y~iLgl~~~a~~~~Ikkayr~l~~~~HPDk~~~~------~~a~~~f~~i~~Ay~~L~~~ 90 (91)
....++|+||||+++++.++||++||++++++|||+++.. ..+.+.|++|++||++|+|-
T Consensus 13 ~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~ 78 (94)
T 1wjz_A 13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNE 78 (94)
T ss_dssp SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSS
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCH
Confidence 3567999999999999999999999999999999998742 45889999999999999974
No 14
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=4.4e-20 Score=110.83 Aligned_cols=58 Identities=38% Similarity=0.730 Sum_probs=53.5
Q ss_pred CCCCchhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHHhcC
Q 034568 32 KPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDR-DCATSRFQEINEAYQGKRS 89 (91)
Q Consensus 32 ~~~~~y~iLgl~~~a~~~~Ikkayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~~L~~ 89 (91)
...++|+||||+++++.++||++||++++++|||+++.. +.+.+.|+.|++||++|++
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d 65 (92)
T 2dmx_A 7 GMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSD 65 (92)
T ss_dssp CCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHS
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCC
Confidence 456999999999999999999999999999999998764 4688999999999999986
No 15
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.81 E-value=8e-21 Score=114.64 Aligned_cols=56 Identities=23% Similarity=0.314 Sum_probs=51.7
Q ss_pred CCchhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCch---HHHHHHHHHHHHHHHhcC
Q 034568 34 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRD---CATSRFQEINEAYQGKRS 89 (91)
Q Consensus 34 ~~~y~iLgl~~~a~~~~Ikkayr~l~~~~HPDk~~~~~---~a~~~f~~i~~Ay~~L~~ 89 (91)
.++|++|||++.++.++||+|||++++++|||++++.+ .|.++|+.|++||++|++
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 58999999999999999999999999999999987643 478999999999999985
No 16
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.81 E-value=7.3e-20 Score=111.58 Aligned_cols=56 Identities=41% Similarity=0.796 Sum_probs=52.2
Q ss_pred CCchhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHHhcC
Q 034568 34 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDR-DCATSRFQEINEAYQGKRS 89 (91)
Q Consensus 34 ~~~y~iLgl~~~a~~~~Ikkayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~~L~~ 89 (91)
.++|+||||+++++.++||++||++++++|||+++.. +.+.+.|+.|++||++|++
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d 58 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSD 58 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHS
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCC
Confidence 4899999999999999999999999999999998875 4588999999999999987
No 17
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.80 E-value=6.7e-20 Score=110.18 Aligned_cols=57 Identities=37% Similarity=0.648 Sum_probs=52.2
Q ss_pred hcCCCCchhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhcC
Q 034568 30 LAKPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQGKRS 89 (91)
Q Consensus 30 ~~~~~~~y~iLgl~~~a~~~~Ikkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~~ 89 (91)
+....++|+||||+++++.++||++||++++++|||++++. .++|++|++||++|++
T Consensus 4 m~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~~f~~i~~Ay~~L~d 60 (92)
T 2o37_A 4 MVKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD---TEKFKEISEAFEILND 60 (92)
T ss_dssp CCSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC---HHHHHHHHHHHHHHTS
T ss_pred cccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh---HHHHHHHHHHHHHHCC
Confidence 34567999999999999999999999999999999999774 5799999999999987
No 18
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.80 E-value=6e-20 Score=113.31 Aligned_cols=60 Identities=30% Similarity=0.525 Sum_probs=54.9
Q ss_pred hcCCCCchhhhcCCCCC-CHHHHHHHHHHHHHHhCCCCCCC---chHHHHHHHHHHHHHHHhcC
Q 034568 30 LAKPKDYYKILEVDYDA-TEEEIRSNYIRLALKWHPDKQKD---RDCATSRFQEINEAYQGKRS 89 (91)
Q Consensus 30 ~~~~~~~y~iLgl~~~a-~~~~Ikkayr~l~~~~HPDk~~~---~~~a~~~f~~i~~Ay~~L~~ 89 (91)
.....++|+||||++++ +.++||++||++++++|||++++ .+.+.+.|++|++||++|++
T Consensus 11 ~~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d 74 (109)
T 2qsa_A 11 YCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKD 74 (109)
T ss_dssp TTTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HcCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCC
Confidence 34578999999999999 99999999999999999999987 34589999999999999987
No 19
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.80 E-value=1.5e-20 Score=115.05 Aligned_cols=58 Identities=45% Similarity=0.739 Sum_probs=53.5
Q ss_pred CCCchhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhcCC
Q 034568 33 PKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQGKRSL 90 (91)
Q Consensus 33 ~~~~y~iLgl~~~a~~~~Ikkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~~~ 90 (91)
..++|+||||+++++.++||++||++++++|||++++.+.+.++|+.|++||++|++.
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~ 59 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDS 59 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCH
Confidence 4689999999999999999999999999999999986555889999999999999873
No 20
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.79 E-value=5.2e-20 Score=108.14 Aligned_cols=52 Identities=19% Similarity=0.342 Sum_probs=48.7
Q ss_pred CCchhhhcCCCC--CCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhcC
Q 034568 34 KDYYKILEVDYD--ATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQGKRS 89 (91)
Q Consensus 34 ~~~y~iLgl~~~--a~~~~Ikkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~~ 89 (91)
.++|+||||+++ ++.++||++||++++++|||++++ .++|++|++||++|++
T Consensus 11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~----~~~f~~i~~AYe~L~~ 64 (79)
T 1faf_A 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKT 64 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----HHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHHhh
Confidence 579999999999 999999999999999999999875 5799999999999986
No 21
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.78 E-value=5.2e-20 Score=113.58 Aligned_cols=62 Identities=24% Similarity=0.367 Sum_probs=53.6
Q ss_pred hhcCCCCchhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-------hHHHHHHHHHHHHHHHhcCCC
Q 034568 29 LLAKPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDR-------DCATSRFQEINEAYQGKRSLD 91 (91)
Q Consensus 29 ~~~~~~~~y~iLgl~~~a~~~~Ikkayr~l~~~~HPDk~~~~-------~~a~~~f~~i~~Ay~~L~~~~ 91 (91)
.+....+||.|||++. ++.++||+|||++++++||||++++ ..|.++|+.|++||++|+|.+
T Consensus 36 ~l~~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 36 ILWSGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TSCTTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HhcccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 4455689999999996 9999999999999999999997632 147899999999999999853
No 22
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.78 E-value=1.9e-19 Score=103.75 Aligned_cols=54 Identities=24% Similarity=0.247 Sum_probs=48.8
Q ss_pred CCCchhhhcCCC-CCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhcCC
Q 034568 33 PKDYYKILEVDY-DATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQGKRSL 90 (91)
Q Consensus 33 ~~~~y~iLgl~~-~a~~~~Ikkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~~~ 90 (91)
..++|+||||++ +++.++||++||++++++|||++++ .+.|++|++||++|++.
T Consensus 13 ~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~----~~~f~~i~~Aye~L~~~ 67 (71)
T 2guz_A 13 SKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGS----PFLATKINEAKDFLEKR 67 (71)
T ss_dssp HHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCC----HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC----HHHHHHHHHHHHHHhhh
Confidence 358999999999 7999999999999999999999755 46999999999999863
No 23
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.77 E-value=4.2e-19 Score=118.51 Aligned_cols=56 Identities=38% Similarity=0.644 Sum_probs=52.8
Q ss_pred CCchhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhcC
Q 034568 34 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQGKRS 89 (91)
Q Consensus 34 ~~~y~iLgl~~~a~~~~Ikkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~~ 89 (91)
.|||+||||+++++.++||+|||++++++|||++++.+.+.++|+.|++||++|+|
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~ 57 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKD 57 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTS
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCC
Confidence 58999999999999999999999999999999997666689999999999999987
No 24
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.76 E-value=8.3e-19 Score=113.92 Aligned_cols=58 Identities=33% Similarity=0.550 Sum_probs=53.0
Q ss_pred CCCCchhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCch------HHHHHHHHHHHHHHHhcC
Q 034568 32 KPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRD------CATSRFQEINEAYQGKRS 89 (91)
Q Consensus 32 ~~~~~y~iLgl~~~a~~~~Ikkayr~l~~~~HPDk~~~~~------~a~~~f~~i~~Ay~~L~~ 89 (91)
...|||+||||+++++.++||++||++++++|||++++.. .+.+.|..|++||++|+|
T Consensus 8 ~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~d 71 (155)
T 2l6l_A 8 PKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGN 71 (155)
T ss_dssp CCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSS
T ss_pred CCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCC
Confidence 4579999999999999999999999999999999988752 367999999999999987
No 25
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.75 E-value=1.4e-18 Score=115.16 Aligned_cols=58 Identities=21% Similarity=0.408 Sum_probs=51.4
Q ss_pred CCCCchhhhcCCCCCC--HHHHHHHHHHHHHHhCCCCCCCchH-----HHHHHHHHHHHHHHhcC
Q 034568 32 KPKDYYKILEVDYDAT--EEEIRSNYIRLALKWHPDKQKDRDC-----ATSRFQEINEAYQGKRS 89 (91)
Q Consensus 32 ~~~~~y~iLgl~~~a~--~~~Ikkayr~l~~~~HPDk~~~~~~-----a~~~f~~i~~Ay~~L~~ 89 (91)
...|||+||||+++++ ..+||++||++++++|||++++... +.+.|..|++||++|+|
T Consensus 2 ~~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~d 66 (174)
T 3hho_A 2 NAMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKD 66 (174)
T ss_dssp --CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3579999999999887 9999999999999999999887532 67899999999999987
No 26
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.75 E-value=2.6e-18 Score=116.59 Aligned_cols=61 Identities=18% Similarity=0.363 Sum_probs=53.0
Q ss_pred hhcCCCCchhhhcCCCC--CCHHHHHHHHHHHHHHhCCCCCCCch-----HHHHHHHHHHHHHHHhcC
Q 034568 29 LLAKPKDYYKILEVDYD--ATEEEIRSNYIRLALKWHPDKQKDRD-----CATSRFQEINEAYQGKRS 89 (91)
Q Consensus 29 ~~~~~~~~y~iLgl~~~--a~~~~Ikkayr~l~~~~HPDk~~~~~-----~a~~~f~~i~~Ay~~L~~ 89 (91)
......|||+||||+++ ++..+||++||++++++|||++++.. .+.++|..|++||++|+|
T Consensus 38 ~~~~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsd 105 (207)
T 3bvo_A 38 APDPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLA 105 (207)
T ss_dssp CCCTTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 33456799999999986 79999999999999999999987642 367899999999999986
No 27
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.74 E-value=8.7e-19 Score=116.94 Aligned_cols=60 Identities=25% Similarity=0.328 Sum_probs=53.8
Q ss_pred hcCCCCchhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCch---HHHHHHHHHHHHHHHhcC
Q 034568 30 LAKPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRD---CATSRFQEINEAYQGKRS 89 (91)
Q Consensus 30 ~~~~~~~y~iLgl~~~a~~~~Ikkayr~l~~~~HPDk~~~~~---~a~~~f~~i~~Ay~~L~~ 89 (91)
+....++|+||||++.++.++||++||++++++|||++++.. .+.+.|+.|++||++|+|
T Consensus 113 l~~~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD 175 (182)
T 1n4c_A 113 LWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFEN 175 (182)
T ss_dssp SCTTCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCC
Confidence 344479999999999999999999999999999999987653 278999999999999986
No 28
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.73 E-value=3.2e-19 Score=111.30 Aligned_cols=53 Identities=21% Similarity=0.434 Sum_probs=49.1
Q ss_pred CCCchhhhcCCCCCCH--HHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhcC
Q 034568 33 PKDYYKILEVDYDATE--EEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQGKRS 89 (91)
Q Consensus 33 ~~~~y~iLgl~~~a~~--~~Ikkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~~ 89 (91)
..++|+||||+++++. ++||++||++++++|||++++ .++|++|++||++|++
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYevL~d 61 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMED 61 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHH
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHHHHCC
Confidence 3589999999999998 999999999999999999876 4799999999999985
No 29
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.72 E-value=5.2e-18 Score=112.16 Aligned_cols=55 Identities=24% Similarity=0.429 Sum_probs=50.4
Q ss_pred CchhhhcCCCCC--CHHHHHHHHHHHHHHhCCCCCCCch-----HHHHHHHHHHHHHHHhcC
Q 034568 35 DYYKILEVDYDA--TEEEIRSNYIRLALKWHPDKQKDRD-----CATSRFQEINEAYQGKRS 89 (91)
Q Consensus 35 ~~y~iLgl~~~a--~~~~Ikkayr~l~~~~HPDk~~~~~-----~a~~~f~~i~~Ay~~L~~ 89 (91)
|||+||||++++ +..+||++||++++++|||++++.. .+.+.|..|++||++|+|
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~d 63 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRH 63 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 799999999998 9999999999999999999988752 356899999999999986
No 30
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.70 E-value=7.9e-19 Score=126.01 Aligned_cols=61 Identities=34% Similarity=0.544 Sum_probs=0.0
Q ss_pred hhcCCCCchhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhcCC
Q 034568 29 LLAKPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQGKRSL 90 (91)
Q Consensus 29 ~~~~~~~~y~iLgl~~~a~~~~Ikkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~~~ 90 (91)
......|||+||||+++|+.++||+|||++++++|||+++++ .+.++|++|++||++|+|-
T Consensus 23 ~~m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~-~a~~~f~~i~~Ay~vL~d~ 83 (329)
T 3lz8_A 23 NAMELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKEN-DAEAKFKDLAEAWEVLKDE 83 (329)
T ss_dssp --------------------------------------------------------------
T ss_pred ccccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCCh-HHHHHHHHHHHHHHHhhhh
Confidence 334567999999999999999999999999999999999875 5899999999999999974
No 31
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.66 E-value=8.6e-18 Score=111.47 Aligned_cols=53 Identities=21% Similarity=0.422 Sum_probs=46.1
Q ss_pred CCCchhhhcCCCCCC--HHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhcC
Q 034568 33 PKDYYKILEVDYDAT--EEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQGKRS 89 (91)
Q Consensus 33 ~~~~y~iLgl~~~a~--~~~Ikkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~~ 89 (91)
..++|+||||+++++ .++||+|||++++++|||++++ .++|++|++||++|+|
T Consensus 10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~----~e~F~~I~~AYevLsd 64 (174)
T 2pf4_E 10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMED 64 (174)
T ss_dssp HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C----CTTTTHHHHHHHHHHH
T ss_pred cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHhCC
Confidence 358999999999998 6999999999999999999876 3799999999999986
No 32
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.62 E-value=1.3e-16 Score=106.38 Aligned_cols=56 Identities=18% Similarity=0.458 Sum_probs=50.4
Q ss_pred cCCCCchhhh------cCCC-CCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhcC
Q 034568 31 AKPKDYYKIL------EVDY-DATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQGKRS 89 (91)
Q Consensus 31 ~~~~~~y~iL------gl~~-~a~~~~Ikkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~~ 89 (91)
....|||+|| |+++ +++..+||++||++++++|||++++ +.+.|..|++||++|+|
T Consensus 8 ~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~vL~d 70 (181)
T 3uo3_A 8 RFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYHTLKD 70 (181)
T ss_dssp CCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHHHHHS
T ss_pred CCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHHHHcC
Confidence 3467999999 5765 8999999999999999999999987 57899999999999987
No 33
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.59 E-value=1.5e-16 Score=122.57 Aligned_cols=60 Identities=35% Similarity=0.573 Sum_probs=30.5
Q ss_pred hcCCCCchhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhcC
Q 034568 30 LAKPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQGKRS 89 (91)
Q Consensus 30 ~~~~~~~y~iLgl~~~a~~~~Ikkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~~ 89 (91)
.....|||+||||+++|+.++||+|||++++++|||++++.+.+.++|++|++||++|+|
T Consensus 17 ~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~ 76 (780)
T 3apo_A 17 GRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKD 76 (780)
T ss_dssp ------CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHS
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcC
Confidence 345679999999999999999999999999999999997666689999999999999987
No 34
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.37 E-value=7.5e-13 Score=74.99 Aligned_cols=51 Identities=14% Similarity=0.110 Sum_probs=45.1
Q ss_pred CCchhhhcCCCC---CCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhc
Q 034568 34 KDYYKILEVDYD---ATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQGKR 88 (91)
Q Consensus 34 ~~~y~iLgl~~~---a~~~~Ikkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~ 88 (91)
...|.||||++. ++.++|+++||+|....|||+++++ .....|++|+++|.
T Consensus 4 ~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~----yl~~ki~~Ake~l~ 57 (65)
T 2guz_B 4 DESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSF----YLQSKVYRAAERLK 57 (65)
T ss_dssp HHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCH----HHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCH----HHHHHHHHHHHHHH
Confidence 357899999999 9999999999999999999998774 56778999999885
No 35
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.95 E-value=8.2e-10 Score=77.69 Aligned_cols=59 Identities=37% Similarity=0.637 Sum_probs=53.4
Q ss_pred CCCCchhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCc---hHHHHHHHHHHHHHHHhcCC
Q 034568 32 KPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDR---DCATSRFQEINEAYQGKRSL 90 (91)
Q Consensus 32 ~~~~~y~iLgl~~~a~~~~Ikkayr~l~~~~HPDk~~~~---~~a~~~f~~i~~Ay~~L~~~ 90 (91)
...++|.+||+...++.++|+++|+++++++|||+.+.+ ..+.+.|+.|.+||++|+|.
T Consensus 380 ~~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~ 441 (450)
T 2y4t_A 380 QKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDP 441 (450)
T ss_dssp HSCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGG
T ss_pred cchhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCH
Confidence 345899999999999999999999999999999998875 35889999999999999874
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=94.75 E-value=0.033 Score=42.33 Aligned_cols=50 Identities=14% Similarity=0.123 Sum_probs=38.6
Q ss_pred hhcCCCCchhhhcCCCCCCH--HHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHH
Q 034568 29 LLAKPKDYYKILEVDYDATE--EEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQG 86 (91)
Q Consensus 29 ~~~~~~~~y~iLgl~~~a~~--~~Ikkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~ 86 (91)
......++|.+||++-+... .+|+++||++++..+++ .+++..|..|+.+
T Consensus 624 ~~~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~--------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 624 LKDNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ--------RHRYTLVDMANKV 675 (681)
T ss_dssp HTSCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH--------HHHHHHHHHHHHH
T ss_pred HHccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh--------HHHHHHHHHhccc
Confidence 33556779999999776655 77999999999966553 4688888888765
No 37
>1qqr_A Streptokinase domain B; non-proteolytic, plasminogen activation, fibrinolysis, hydrolase activator; 2.30A {Streptococcus dysgalactiae subsp} SCOP: d.15.5.1 PDB: 1c4p_A
Probab=46.57 E-value=9.6 Score=23.87 Aligned_cols=31 Identities=23% Similarity=0.239 Sum_probs=27.0
Q ss_pred chhhhcCCCCCCHHHHHHHHHHHHHHhCCCC
Q 034568 36 YYKILEVDYDATEEEIRSNYIRLALKWHPDK 66 (91)
Q Consensus 36 ~y~iLgl~~~a~~~~Ikkayr~l~~~~HPDk 66 (91)
.+..+.|....+.++++++=-.+..++|||-
T Consensus 34 ~l~~k~ig~~Its~eL~~~AqeiL~q~hp~Y 64 (138)
T 1qqr_A 34 LLKTLAIGDTITSQELLAQAQSILNKNHPGY 64 (138)
T ss_dssp EEEEECTTCEEEHHHHHHHHHHHHHHHSTTE
T ss_pred hhcccccCcccCHHHHHHHHHHHHHhcCCCc
Confidence 4667778888999999999999999999983
No 38
>1ug2_A 2610100B20RIK gene product; hypothetical protein, MYB-like DNA binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.4.1.3
Probab=45.18 E-value=14 Score=21.71 Aligned_cols=23 Identities=17% Similarity=0.284 Sum_probs=19.4
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCC
Q 034568 45 DATEEEIRSNYIRLALKWHPDKQ 67 (91)
Q Consensus 45 ~a~~~~Ikkayr~l~~~~HPDk~ 67 (91)
+-++.+|+..|++|++.+|--..
T Consensus 67 Nks~nqV~~RFq~Lm~Lf~~~~~ 89 (95)
T 1ug2_A 67 NKTPVEVSHRFRELMQLFHTACE 89 (95)
T ss_dssp SCCHHHHHHHHHHHHHHHHHCSS
T ss_pred cCCHHHHHHHHHHHHHHHHHHhc
Confidence 46899999999999999976553
No 39
>2lxi_A RNA-binding protein 10; NMR {Homo sapiens}
Probab=40.11 E-value=25 Score=19.22 Aligned_cols=20 Identities=25% Similarity=0.253 Sum_probs=17.8
Q ss_pred hcCCCCCCHHHHHHHHHHHH
Q 034568 40 LEVDYDATEEEIRSNYIRLA 59 (91)
Q Consensus 40 Lgl~~~a~~~~Ikkayr~l~ 59 (91)
=|||.+++.++|+..|.+..
T Consensus 7 ~nLp~~~te~~l~~~F~~~G 26 (91)
T 2lxi_A 7 RMLPQAATEDDIRGQLQSHG 26 (91)
T ss_dssp ETCCSSCCHHHHHHHHHHHT
T ss_pred eCCCCCCCHHHHHHHHHHhC
Confidence 38999999999999998875
No 40
>3cxb_A Protein SIFA; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Salmonella typhimurium} PDB: 3hw2_A
Probab=31.72 E-value=73 Score=22.65 Aligned_cols=30 Identities=20% Similarity=0.169 Sum_probs=23.5
Q ss_pred HHHHHHHHHhCCCCCCCchHHHHHHHHHHH
Q 034568 53 SNYIRLALKWHPDKQKDRDCATSRFQEINE 82 (91)
Q Consensus 53 kayr~l~~~~HPDk~~~~~~a~~~f~~i~~ 82 (91)
+|..-+...+||+.+..++...++|.++.+
T Consensus 45 EAl~CI~eLcHp~~~~TrE~v~~~F~~LK~ 74 (336)
T 3cxb_A 45 KADRCLHEMLFAERAPTRERLTEIFFELKE 74 (336)
T ss_dssp HHHHHHHHHHSSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 677888888999988887767777777654
No 41
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=30.26 E-value=49 Score=16.81 Aligned_cols=20 Identities=25% Similarity=0.292 Sum_probs=17.0
Q ss_pred hcCCCCCCHHHHHHHHHHHH
Q 034568 40 LEVDYDATEEEIRSNYIRLA 59 (91)
Q Consensus 40 Lgl~~~a~~~~Ikkayr~l~ 59 (91)
=|||...+.++|+..|.+..
T Consensus 5 ~nLp~~~t~~~l~~~F~~~G 24 (75)
T 1iqt_A 5 GGLSPDTPEEKIREYFGGFG 24 (75)
T ss_dssp SCCCSSCCHHHHHHHHHHHS
T ss_pred eCCCCCCCHHHHHHHHHhcC
Confidence 37899999999999998763
No 42
>2lr8_A CAsp8-associated protein 2; structural genomics, northeast structural genomics consortiu PSI-biology, apoptosis; NMR {Homo sapiens}
Probab=34.55 E-value=12 Score=20.73 Aligned_cols=22 Identities=14% Similarity=0.323 Sum_probs=17.4
Q ss_pred CCCHHHHHHHHHHHHHHhCCCC
Q 034568 45 DATEEEIRSNYIRLALKWHPDK 66 (91)
Q Consensus 45 ~a~~~~Ikkayr~l~~~~HPDk 66 (91)
+-++++|+..|++|++.+|-.|
T Consensus 47 nks~~QV~~RF~~Lm~Lf~kSk 68 (70)
T 2lr8_A 47 DKNPNQVSERFQQLMKLFEKSK 68 (70)
Confidence 4578889999999988887654
No 43
>2ql2_B Neurod1, neurogenic differentiation factor 1; basic-helix-loop-helix; HET: DNA; 2.50A {Mus musculus}
Probab=27.63 E-value=33 Score=18.02 Aligned_cols=16 Identities=25% Similarity=0.468 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHhcCC
Q 034568 75 SRFQEINEAYQGKRSL 90 (91)
Q Consensus 75 ~~f~~i~~Ay~~L~~~ 90 (91)
.+.+.||.||+.|++.
T Consensus 12 ~R~~~iN~af~~LR~~ 27 (60)
T 2ql2_B 12 NRMHGLNAALDNLRKV 27 (60)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4678899999998753
No 44
>1mdy_A Protein (MYOD BHLH domain); protein-DNA complex, transcription/DNA complex; HET: DNA; 2.80A {Mus musculus} SCOP: a.38.1.1 PDB: 1mdy_B*
Probab=27.61 E-value=45 Score=17.99 Aligned_cols=16 Identities=25% Similarity=0.517 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHhcCC
Q 034568 75 SRFQEINEAYQGKRSL 90 (91)
Q Consensus 75 ~~f~~i~~Ay~~L~~~ 90 (91)
.+.+.||.||+.|++.
T Consensus 22 ~R~~~iN~af~~LR~~ 37 (68)
T 1mdy_A 22 RRLSKVNEAFETLKRS 37 (68)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHh
Confidence 4678999999999864
No 45
>2i4r_A V-type ATP synthase subunit F; NESG, GR52A, ATP synthesis, hydrolase, structural genomics, protein structure initiative; 2.80A {Archaeoglobus fulgidus} SCOP: c.149.1.1
Probab=26.79 E-value=43 Score=19.46 Aligned_cols=26 Identities=12% Similarity=0.121 Sum_probs=20.3
Q ss_pred chhhhcCCC---CCCHHHHHHHHHHHHHH
Q 034568 36 YYKILEVDY---DATEEEIRSNYIRLALK 61 (91)
Q Consensus 36 ~y~iLgl~~---~a~~~~Ikkayr~l~~~ 61 (91)
-|.+.|+.. .-+.+++++++++++..
T Consensus 23 GFrLaGi~~~~~~~~~ee~~~~~~~l~~~ 51 (102)
T 2i4r_A 23 GFMLAGISDIYEVTSDEEIVKAVEDVLKR 51 (102)
T ss_dssp HHHHTTCCCEEECCSHHHHHHHHHHHHHC
T ss_pred HHHHcCCCcccCCCCHHHHHHHHHHHhhC
Confidence 467778875 34889999999998864
No 46
>2ov6_A V-type ATP synthase subunit F; F subunit, A1AO ATP synthase, hydrolase; NMR {Methanosarcina mazei}
Probab=24.71 E-value=33 Score=19.80 Aligned_cols=26 Identities=4% Similarity=-0.012 Sum_probs=19.8
Q ss_pred chhhhcCC---CCCCHHHHHHHHHHHHHH
Q 034568 36 YYKILEVD---YDATEEEIRSNYIRLALK 61 (91)
Q Consensus 36 ~y~iLgl~---~~a~~~~Ikkayr~l~~~ 61 (91)
-|.+.|+. +-.+.++++++++++...
T Consensus 14 GFrLaGi~~v~~v~~~ee~~~~~~~l~~~ 42 (101)
T 2ov6_A 14 GFRLAGISKVYETPDIPATESAVRSVLED 42 (101)
T ss_dssp HHHHHTCCEEEECCSTTTHHHHHHHHHHH
T ss_pred HHHHcCCCceEecCCHHHHHHHHHHHhhC
Confidence 46777887 345778899999998864
No 47
>1vq8_S 50S ribosomal protein L23P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.12.1.1 PDB: 1vq4_S* 1vq5_S* 1vq6_S* 1vq7_S* 1s72_S* 1vq9_S* 1vqk_S* 1vql_S* 1vqm_S* 1vqn_S* 1vqo_S* 1vqp_S* 1yhq_S* 1yi2_S* 1yij_S* 1yit_S* 1yj9_S* 1yjn_S* 1yjw_S* 2otj_S* ...
Probab=24.62 E-value=45 Score=18.88 Aligned_cols=20 Identities=20% Similarity=0.180 Sum_probs=17.6
Q ss_pred hhcCCCCCCHHHHHHHHHHH
Q 034568 39 ILEVDYDATEEEIRSNYIRL 58 (91)
Q Consensus 39 iLgl~~~a~~~~Ikkayr~l 58 (91)
+|-|++.|+..+||+|-.++
T Consensus 26 ~F~V~~~AnK~qIK~ave~l 45 (85)
T 1vq8_S 26 QFAVDDRASKGEVADAVEEQ 45 (85)
T ss_dssp EEEECTTCCHHHHHHHHHHH
T ss_pred EEEECCCCCHHHHHHHHHHH
Confidence 67899999999999998766
No 48
>2hzc_A Splicing factor U2AF 65 kDa subunit; RNA splicing, RRM, RNA recognition, alternative conformation binding protein; HET: P6G; 1.47A {Homo sapiens} PDB: 1u2f_A
Probab=23.70 E-value=73 Score=16.56 Aligned_cols=20 Identities=15% Similarity=0.179 Sum_probs=17.4
Q ss_pred hcCCCCCCHHHHHHHHHHHH
Q 034568 40 LEVDYDATEEEIRSNYIRLA 59 (91)
Q Consensus 40 Lgl~~~a~~~~Ikkayr~l~ 59 (91)
=||+.+++.++|+..|.+..
T Consensus 12 ~nLp~~~t~~~l~~~F~~~~ 31 (87)
T 2hzc_A 12 GNIPFGITEEAMMDFFNAQM 31 (87)
T ss_dssp ESCCTTCCHHHHHHHHHHHH
T ss_pred eCCCCCCCHHHHHHHHHHHh
Confidence 37899999999999998874
No 49
>2zjr_Q 50S ribosomal protein L23; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: d.12.1.1 PDB: 1sm1_R* 2aar_R 2d3o_R 2zjp_Q* 2zjq_Q 1nkw_R 3cf5_Q* 3dll_Q* 3pio_Q* 3pip_Q* 1nwy_R* 1nwx_R* 1xbp_R* 1pnu_R 1pny_R 1vor_U 1vou_U 1vow_U 1voy_U 1vp0_U
Probab=22.14 E-value=53 Score=18.99 Aligned_cols=20 Identities=25% Similarity=0.192 Sum_probs=18.0
Q ss_pred hhcCCCCCCHHHHHHHHHHH
Q 034568 39 ILEVDYDATEEEIRSNYIRL 58 (91)
Q Consensus 39 iLgl~~~a~~~~Ikkayr~l 58 (91)
+|-|++.|+..|||+|-.++
T Consensus 26 ~F~V~~~anK~eIK~aVE~l 45 (95)
T 2zjr_Q 26 SFWVSPKATKTEIKDAIQQA 45 (95)
T ss_dssp EEEECSSCTHHHHHHHHHHH
T ss_pred EEEEcCCCCHHHHHHHHHHH
Confidence 78999999999999998766
No 50
>2o70_A OHCU decarboxylase; URIC acid, decarboxylation, 5-hydroxyisourate, allantoin, lyase; 1.80A {Danio rerio} SCOP: a.288.1.1 PDB: 2o73_A* 2o74_A*
Probab=21.93 E-value=1.2e+02 Score=19.17 Aligned_cols=46 Identities=15% Similarity=0.228 Sum_probs=28.2
Q ss_pred cCCCCCCHHHHHHHHHHH-----------HHHhCCCCCCCc-----------------------hHHHHHHHHHHHHHHH
Q 034568 41 EVDYDATEEEIRSNYIRL-----------ALKWHPDKQKDR-----------------------DCATSRFQEINEAYQG 86 (91)
Q Consensus 41 gl~~~a~~~~Ikkayr~l-----------~~~~HPDk~~~~-----------------------~~a~~~f~~i~~Ay~~ 86 (91)
.-.|-.+.+++..+.... ++.-|||..+.. +...+.|..+|.+|+-
T Consensus 34 ~~rPf~s~~~L~~a~~~~~~~~~~~~~~~~l~aHP~lg~~~~~~~~lt~~S~~EQa~agl~~~~~~~~~~l~~lN~~Y~~ 113 (174)
T 2o70_A 34 SYRPFKDLADIEARISEFIHSLPDSGKEGILRCHPDLAGRDLQSGTLTPESQEEQSQAGMTTLDSAEIVHMYRLNSEYKE 113 (174)
T ss_dssp GGCSCSSHHHHHHHHHHHHHHSCHHHHHHHHHTSCCTTSHHHHHTCCCHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHH
T ss_pred HcCCCCCHHHHHHHHHHHHHhCCHHHHHHHHHhCCccccccccccccchhhHHHHHhhccccCCHHHHHHHHHHHHHHHH
Confidence 334456666666655333 455699886321 1234789999999973
No 51
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=21.79 E-value=59 Score=16.49 Aligned_cols=18 Identities=11% Similarity=0.375 Sum_probs=15.7
Q ss_pred cCCCCCCHHHHHHHHHHH
Q 034568 41 EVDYDATEEEIRSNYIRL 58 (91)
Q Consensus 41 gl~~~a~~~~Ikkayr~l 58 (91)
|||.+.+.++|+..|.+.
T Consensus 6 nlp~~~t~~~l~~~F~~~ 23 (75)
T 2mss_A 6 GLSVNTTVEDVKHYFEQF 23 (75)
T ss_dssp CCCSSCCHHHHHHHHHTT
T ss_pred cCCCCCCHHHHHHHHHhc
Confidence 789999999999988765
No 52
>2ket_A Cathelicidin-6; antimicrobial peptide, antibiotic, antimicrobial, fungicide, pyrrolidone carboxylic acid, secreted; NMR {Bos taurus}
Probab=21.72 E-value=64 Score=14.02 Aligned_cols=17 Identities=24% Similarity=0.403 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHhCCC
Q 034568 49 EEIRSNYIRLALKWHPD 65 (91)
Q Consensus 49 ~~Ikkayr~l~~~~HPD 65 (91)
...++.|+++-+++.|-
T Consensus 4 krfrkkfkklfkklspv 20 (27)
T 2ket_A 4 KRFRKKFKKLFKKLSPV 20 (27)
T ss_dssp HHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHHHHhcCcc
Confidence 45678888888888774
No 53
>3r8s_T 50S ribosomal protein L23; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 3fik_T 3j19_T 2wwq_T 3oat_T* 3oas_T* 3ofd_T 3ofc_T 3ofr_T* 3ofz_T* 3og0_T 3ofq_T 3r8t_T 2j28_T 3e1b_M 3e1d_M 3iy9_T 3i1n_T 1p85_R 1p86_R 1vs8_T ...
Probab=21.60 E-value=56 Score=18.81 Aligned_cols=20 Identities=40% Similarity=0.582 Sum_probs=17.2
Q ss_pred hhcCCCCCCHHHHHHHHHHH
Q 034568 39 ILEVDYDATEEEIRSNYIRL 58 (91)
Q Consensus 39 iLgl~~~a~~~~Ikkayr~l 58 (91)
+|-|++.|+..+||+|-.++
T Consensus 31 ~F~V~~~AnK~eIK~AVE~l 50 (93)
T 3r8s_T 31 VLKVAKDATKAEIKAAVQKL 50 (93)
T ss_dssp EEEECSSCCHHHHHHHHHHH
T ss_pred EEEECCCCCHHHHHHHHHHH
Confidence 47889999999999998765
No 54
>1xs0_A Inhibitor of vertebrate lysozyme; alpha beta fold, dimer, hydrolase inhibitor; 1.58A {Escherichia coli} SCOP: d.233.1.1 PDB: 1gpq_A
Probab=21.20 E-value=42 Score=20.85 Aligned_cols=33 Identities=18% Similarity=0.154 Sum_probs=26.3
Q ss_pred chhhhcCCCC--CCHHHHHHHHHHHHHHhCCCCCC
Q 034568 36 YYKILEVDYD--ATEEEIRSNYIRLALKWHPDKQK 68 (91)
Q Consensus 36 ~y~iLgl~~~--a~~~~Ikkayr~l~~~~HPDk~~ 68 (91)
-|.-||.+.. ++-..|=.|+..=++..|||...
T Consensus 93 ~~~WLG~Pd~~sidg~t~l~a~lt~sl~nhP~~f~ 127 (136)
T 1xs0_A 93 KLTWLNVNDALSIDGKTVLFAALTGSLENHPDGFN 127 (136)
T ss_dssp EEEEECSSCCCCHHHHHHHHHHHHTHHHHSTTSCC
T ss_pred eeEecCCCChhhcccHHHHHHHHhcchhcCccccc
Confidence 4778999764 35677889999999999999754
No 55
>3j21_T 50S ribosomal protein L23P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=21.14 E-value=59 Score=18.47 Aligned_cols=20 Identities=25% Similarity=0.348 Sum_probs=17.5
Q ss_pred hhcCCCCCCHHHHHHHHHHH
Q 034568 39 ILEVDYDATEEEIRSNYIRL 58 (91)
Q Consensus 39 iLgl~~~a~~~~Ikkayr~l 58 (91)
+|-|.+.|+..+||+|-.++
T Consensus 27 ~F~Vd~~AnK~qIK~AVe~l 46 (86)
T 3j21_T 27 TFIVDRRATKQDIKRAVEEI 46 (86)
T ss_dssp EEEECTTCCHHHHHHHHHHH
T ss_pred EEEEcCCCCHHHHHHHHHHH
Confidence 47889999999999998776
No 56
>3o7i_A OHCU decarboxylase; lyase; 1.50A {Klebsiella pneumoniae subsp} PDB: 3o7h_A 3o7j_A* 3o7k_A
Probab=20.82 E-value=1.1e+02 Score=19.74 Aligned_cols=43 Identities=19% Similarity=0.174 Sum_probs=27.3
Q ss_pred CCCCHHHHHHHHHHH-----------HHHhCCCCCCCc---------------------hHHHHHHHHHHHHHHH
Q 034568 44 YDATEEEIRSNYIRL-----------ALKWHPDKQKDR---------------------DCATSRFQEINEAYQG 86 (91)
Q Consensus 44 ~~a~~~~Ikkayr~l-----------~~~~HPDk~~~~---------------------~~a~~~f~~i~~Ay~~ 86 (91)
|-+|.+++..+.... ++.-|||..+.. +...+.|..+|.+|+-
T Consensus 60 PF~s~~~L~~a~~~~~~~~~~~~~~~~l~aHP~Lg~~~~~~~~lt~~S~~EQa~~~~~~~~e~~~L~~LN~~Ye~ 134 (189)
T 3o7i_A 60 PFASRHALLQTAREAMANWGEDELNAALSAHPRIGEKPTGSQAHAALSRQEQSSVDSENERLAQALREGNARYEA 134 (189)
T ss_dssp CCSCHHHHHHHHHHHHHTCCHHHHHHHHTTCCCTTSSCC----------------CCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCHHHHHHHHHhCCccccccccccchhhhhHHHHhhhcCCCHHHHHHHHHHHHHHHH
Confidence 445666666665444 355699986432 1245688999999973
No 57
>1r4v_A Hypothetical protein AQ_328; structural genomics, all-alpha, histon fold, PSI, protein ST initiative, midwest center for structural genomics; HET: MSE; 1.90A {Aquifex aeolicus} SCOP: a.22.1.4
Probab=20.43 E-value=1.7e+02 Score=18.85 Aligned_cols=21 Identities=10% Similarity=0.063 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHhCCCCCCCch
Q 034568 51 IRSNYIRLALKWHPDKQKDRD 71 (91)
Q Consensus 51 Ikkayr~l~~~~HPDk~~~~~ 71 (91)
|-=++-+..+..||++++.++
T Consensus 138 L~valARv~K~l~Pernp~~e 158 (171)
T 1r4v_A 138 LLLMHADVIKKATGERKPSRE 158 (171)
T ss_dssp HHHHHHHHHHHHCCCSSCCHH
T ss_pred HHHHHHHHHHHhCCCCCCCHH
Confidence 334556677888999887753
No 58
>1xsv_A Hypothetical UPF0122 protein SAV1236; helix-turn-helix, putative DNA-binding protein, signal recognition particle, unknown function; 1.70A {Staphylococcus aureus subsp} SCOP: a.4.13.3
Probab=20.35 E-value=65 Score=18.63 Aligned_cols=44 Identities=16% Similarity=0.094 Sum_probs=27.1
Q ss_pred hhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhc
Q 034568 39 ILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQGKR 88 (91)
Q Consensus 39 iLgl~~~a~~~~Ikkayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~ 88 (91)
.||++...-...+.++.+++...+.. ....+.|..+.+.++-|.
T Consensus 50 ~lgiS~~tV~~~l~ra~~kLr~~l~~------~~~~~~~~~~~~~~~~~~ 93 (113)
T 1xsv_A 50 TFNVSRQAVYDNIRRTGDLVEDYEKK------LELYQKFEQRREIYDEMK 93 (113)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHHHHHH------HCHHHHHHHHHHHHHHHT
T ss_pred HHCcCHHHHHHHHHHHHHHHHHHHHH------HhHHhHHHHHHHHHHHHH
Confidence 46776666556666666666655522 114567777777777664
Done!