BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034571
MNITLDNARIAVKAALEEGIVPGGGVALLHASKVLSICSNLKTLISKLVLRFYRMLLRFL
FFFFPFSLTSIEFVSSLIVVHRTVQFSLSLI

High Scoring Gene Products

Symbol, full name Information P value
HSP60-2
heat shock protein 60-2 		protein from Arabidopsis thaliana 0.00025
HSP60-3A
heat shock protein 60-3A 		protein from Arabidopsis thaliana 0.00040
PF10_0153
hsp60 		gene from Plasmodium falciparum 0.00085
PF10_0153
Heat shock protein 60 		protein from Plasmodium falciparum 3D7 0.00085

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034571
        (91 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2046590 - symbol:HSP60-2 "heat shock protein 6...   100  0.00025   1
TAIR|locus:2087959 - symbol:HSP60-3A "heat shock protein ...    98  0.00040   1
GENEDB_PFALCIPARUM|PF10_0153 - symbol:PF10_0153 "hsp60" s...    95  0.00085   1
UNIPROTKB|Q8IJN9 - symbol:PF10_0153 "Heat shock protein 6...    95  0.00085   1


>TAIR|locus:2046590 [details] [associations]
            symbol:HSP60-2 "heat shock protein 60-2" species:3702
            "Arabidopsis thaliana" [GO:0005524 "ATP binding" evidence=IEA;IDA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion"
            evidence=ISM;ISS;IDA] [GO:0006457 "protein folding" evidence=IEA]
            [GO:0006954 "inflammatory response" evidence=ISS] [GO:0042026
            "protein refolding" evidence=IEA] [GO:0044267 "cellular protein
            metabolic process" evidence=IEA] [GO:0009507 "chloroplast"
            evidence=IDA] [GO:0005774 "vacuolar membrane" evidence=IDA]
            [GO:0005886 "plasma membrane" evidence=IDA] [GO:0005507 "copper ion
            binding" evidence=IDA] [GO:0009570 "chloroplast stroma"
            evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
            [GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0007010
            "cytoskeleton organization" evidence=RCA] [GO:0009165 "nucleotide
            biosynthetic process" evidence=RCA] [GO:0009220 "pyrimidine
            ribonucleotide biosynthetic process" evidence=RCA] [GO:0010498
            "proteasomal protein catabolic process" evidence=RCA]
            InterPro:IPR001844 InterPro:IPR002423 InterPro:IPR018370
            Pfam:PF00118 PRINTS:PR00298 PROSITE:PS00296 GO:GO:0005739
            GO:GO:0005886 GO:GO:0005524 GO:GO:0005774 GO:GO:0009570
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006950 GO:GO:0009941
            GO:GO:0005507 EMBL:AC002334 GO:GO:0042026 eggNOG:COG0459
            SUPFAM:SSF48592 PANTHER:PTHR11353 HOGENOM:HOG000076290 KO:K04077
            TIGRFAMs:TIGR02348 ProtClustDB:CLSN2684352 EMBL:AY136360
            EMBL:BT000103 EMBL:AK175415 IPI:IPI00520505 PIR:F84742
            RefSeq:NP_850203.1 UniGene:At.27615 ProteinModelPortal:Q8L7B5
            SMR:Q8L7B5 IntAct:Q8L7B5 STRING:Q8L7B5 PaxDb:Q8L7B5 PRIDE:Q8L7B5
            EnsemblPlants:AT2G33210.1 GeneID:817883 KEGG:ath:AT2G33210
            GeneFarm:2203 TAIR:At2g33210 InParanoid:Q8L7B5 OMA:CATRAAV
            PhylomeDB:Q8L7B5 Genevestigator:Q8L7B5 GermOnline:AT2G33210
            Uniprot:Q8L7B5
        Length = 585

 Score = 100 (40.3 bits), Expect = 0.00025, P = 0.00025
 Identities = 21/25 (84%), Positives = 23/25 (92%)

Query:    11 AVKAALEEGIVPGGGVALLHASKVL 35
             A KAA+EEGIVPGGGVALL+ASK L
Sbjct:   433 ATKAAVEEGIVPGGGVALLYASKEL 457


>TAIR|locus:2087959 [details] [associations]
            symbol:HSP60-3A "heat shock protein 60-3A" species:3702
            "Arabidopsis thaliana" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion"
            evidence=ISM;IDA] [GO:0006457 "protein folding" evidence=IEA]
            [GO:0042026 "protein refolding" evidence=IEA] [GO:0044267 "cellular
            protein metabolic process" evidence=IEA] [GO:0046686 "response to
            cadmium ion" evidence=IEP] [GO:0005774 "vacuolar membrane"
            evidence=IDA] InterPro:IPR001844 InterPro:IPR002423
            InterPro:IPR018370 Pfam:PF00118 PRINTS:PR00298 PROSITE:PS00296
            GO:GO:0005739 GO:GO:0005524 GO:GO:0005774 GO:GO:0046686
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006950 GO:GO:0042026
            eggNOG:COG0459 SUPFAM:SSF48592 PANTHER:PTHR11353
            HOGENOM:HOG000076290 KO:K04077 OMA:KSPYFGD TIGRFAMs:TIGR02348
            ProtClustDB:CLSN2684352 EMBL:AB028610 EMBL:AY056782 EMBL:AY094453
            EMBL:BT015923 IPI:IPI00520593 RefSeq:NP_566466.1 UniGene:At.8222
            ProteinModelPortal:Q93ZM7 SMR:Q93ZM7 IntAct:Q93ZM7 STRING:Q93ZM7
            PaxDb:Q93ZM7 PRIDE:Q93ZM7 EnsemblPlants:AT3G13860.1 GeneID:820599
            KEGG:ath:AT3G13860 GeneFarm:2225 TAIR:At3g13860 InParanoid:Q93ZM7
            PhylomeDB:Q93ZM7 Genevestigator:Q93ZM7 GermOnline:AT3G13860
            Uniprot:Q93ZM7
        Length = 572

 Score = 98 (39.6 bits), Expect = 0.00040, P = 0.00040
 Identities = 21/33 (63%), Positives = 27/33 (81%)

Query:    11 AVKAALEEGIVPGGGVALLHASKVLSICSNLKT 43
             A +AA+EEGI+PGGGVALL+A+K L    NL+T
Sbjct:   432 ATRAAVEEGIIPGGGVALLYATKALD---NLQT 461


>GENEDB_PFALCIPARUM|PF10_0153 [details] [associations]
            symbol:PF10_0153 "hsp60" species:5833
            "Plasmodium falciparum" [GO:0042623 "ATPase activity, coupled"
            evidence=ISS] [GO:0006986 "response to unfolded protein"
            evidence=ISS] [GO:0006626 "protein targeting to mitochondrion"
            evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS]
            HAMAP:MF_00600 InterPro:IPR001844 InterPro:IPR002423
            InterPro:IPR018370 Pfam:PF00118 PRINTS:PR00298 PROSITE:PS00296
            GO:GO:0005739 GO:GO:0005524 GO:GO:0006626 EMBL:AE014185
            GO:GO:0006986 GO:GO:0042026 SUPFAM:SSF48592 PANTHER:PTHR11353
            GO:GO:0042623 HOGENOM:HOG000076290 KO:K04077 TIGRFAMs:TIGR02348
            OMA:CATRAAV ProtClustDB:PTZ00114 RefSeq:XP_001347438.1 HSSP:Q9Z462
            ProteinModelPortal:Q8IJN9 PRIDE:Q8IJN9
            EnsemblProtists:PF10_0153:mRNA GeneID:810311 KEGG:pfa:PF10_0153
            EuPathDB:PlasmoDB:PF3D7_1015600 Uniprot:Q8IJN9
        Length = 580

 Score = 95 (38.5 bits), Expect = 0.00086, P = 0.00085
 Identities = 21/31 (67%), Positives = 24/31 (77%)

Query:     5 LDNARIAVKAALEEGIVPGGGVALLHASKVL 35
             + +A  A KAA+EEGIVPGGG ALL ASK L
Sbjct:   426 IQDALCATKAAVEEGIVPGGGSALLFASKEL 456


>UNIPROTKB|Q8IJN9 [details] [associations]
            symbol:PF10_0153 "Heat shock protein 60" species:36329
            "Plasmodium falciparum 3D7" [GO:0005739 "mitochondrion"
            evidence=ISS] [GO:0006626 "protein targeting to mitochondrion"
            evidence=ISS] [GO:0006986 "response to unfolded protein"
            evidence=ISS] [GO:0042623 "ATPase activity, coupled" evidence=ISS]
            HAMAP:MF_00600 InterPro:IPR001844 InterPro:IPR002423
            InterPro:IPR018370 Pfam:PF00118 PRINTS:PR00298 PROSITE:PS00296
            GO:GO:0005739 GO:GO:0005524 GO:GO:0006626 EMBL:AE014185
            GO:GO:0006986 GO:GO:0042026 SUPFAM:SSF48592 PANTHER:PTHR11353
            GO:GO:0042623 HOGENOM:HOG000076290 KO:K04077 TIGRFAMs:TIGR02348
            OMA:CATRAAV ProtClustDB:PTZ00114 RefSeq:XP_001347438.1 HSSP:Q9Z462
            ProteinModelPortal:Q8IJN9 PRIDE:Q8IJN9
            EnsemblProtists:PF10_0153:mRNA GeneID:810311 KEGG:pfa:PF10_0153
            EuPathDB:PlasmoDB:PF3D7_1015600 Uniprot:Q8IJN9
        Length = 580

 Score = 95 (38.5 bits), Expect = 0.00086, P = 0.00085
 Identities = 21/31 (67%), Positives = 24/31 (77%)

Query:     5 LDNARIAVKAALEEGIVPGGGVALLHASKVL 35
             + +A  A KAA+EEGIVPGGG ALL ASK L
Sbjct:   426 IQDALCATKAAVEEGIVPGGGSALLFASKEL 456


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.134   0.351    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       91        70   0.00091  102 3  10 22  0.41    28
                                                     29  0.41    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  484 (52 KB)
  Total size of DFA:  88 KB (2067 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.40u 0.13s 8.53t   Elapsed:  00:00:00
  Total cpu time:  8.40u 0.13s 8.53t   Elapsed:  00:00:00
  Start:  Thu May  9 20:03:16 2013   End:  Thu May  9 20:03:16 2013

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