BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034571
(91 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2WAW8|CH60_MAGSA 60 kDa chaperonin OS=Magnetospirillum magneticum (strain AMB-1 /
ATCC 700264) GN=groL PE=3 SV=1
Length = 552
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVL 35
+D+A A +AA+EEGIVPGGGVALLHA K L
Sbjct: 396 VDDALHATRAAVEEGIVPGGGVALLHAVKAL 426
>sp|A1UTX7|CH60_BARBK 60 kDa chaperonin OS=Bartonella bacilliformis (strain ATCC 35685 /
KC583) GN=groL PE=3 SV=1
Length = 544
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/33 (66%), Positives = 27/33 (81%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVLSI 37
+D+A A +AA+EEGIVPGGG ALL A+K LSI
Sbjct: 396 VDDALNATRAAVEEGIVPGGGTALLRAAKALSI 428
>sp|B0SXR2|CH60_CAUSK 60 kDa chaperonin OS=Caulobacter sp. (strain K31) GN=groL PE=3 SV=1
Length = 548
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/32 (68%), Positives = 27/32 (84%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVLS 36
+D+A A +AA+EEGIVPGGGVALL ASK L+
Sbjct: 396 VDDALNATRAAVEEGIVPGGGVALLKASKALA 427
>sp|Q6MBR6|CH603_PARUW 60 kDa chaperonin 3 OS=Protochlamydia amoebophila (strain UWE25)
GN=groL3 PE=3 SV=1
Length = 534
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVL 35
D++ + KAALEEGIVPGGGVALL+ASK L
Sbjct: 397 FDDSLNSTKAALEEGIVPGGGVALLNASKTL 427
>sp|Q2N5R9|CH602_ERYLH 60 kDa chaperonin 2 OS=Erythrobacter litoralis (strain HTCC2594)
GN=groL2 PE=3 SV=1
Length = 550
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVL 35
+D+A A +AA+EEGIVPGGG ALL+A+KVL
Sbjct: 396 VDDALHATRAAVEEGIVPGGGTALLYATKVL 426
>sp|A5EG60|CH603_BRASB 60 kDa chaperonin 3 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC
BAA-1182) GN=groL3 PE=3 SV=1
Length = 540
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVL 35
+D+A A +AA+EEGI+PGGGVALL A+KVL
Sbjct: 396 VDDALHATRAAVEEGILPGGGVALLRATKVL 426
>sp|A4YRI5|CH601_BRASO 60 kDa chaperonin 1 OS=Bradyrhizobium sp. (strain ORS278) GN=groL1
PE=3 SV=1
Length = 539
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVL 35
+D+A A +AA+EEGI+PGGGVALL A+KVL
Sbjct: 396 VDDALHATRAAVEEGILPGGGVALLRATKVL 426
>sp|A8ILV4|CH601_AZOC5 60 kDa chaperonin 1 OS=Azorhizobium caulinodans (strain ATCC 43989
/ DSM 5975 / ORS 571) GN=groL1 PE=3 SV=1
Length = 547
Score = 45.8 bits (107), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 3/50 (6%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVLSICSNLKTLIS---KLVLR 51
+D+A A +AA+EEGIVPGGGVALL A K + S+ I+ K+VLR
Sbjct: 396 VDDALNATRAAVEEGIVPGGGVALLRAKKAVEALSSENPDIAAGIKIVLR 445
>sp|A8I5R5|CH602_AZOC5 60 kDa chaperonin 2 OS=Azorhizobium caulinodans (strain ATCC 43989
/ DSM 5975 / ORS 571) GN=groL2 PE=3 SV=1
Length = 542
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVL 35
+D+A A +AA+EEGIVPGGGVALL A KVL
Sbjct: 396 VDDALHATRAAVEEGIVPGGGVALLRAIKVL 426
>sp|C0R2V3|CH60_WOLWR 60 kDa chaperonin OS=Wolbachia sp. subsp. Drosophila simulans
(strain wRi) GN=groL PE=3 SV=1
Length = 549
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVL 35
+++A A +AA+EEGIVPGGGVALL+AS VL
Sbjct: 399 VEDALHATRAAIEEGIVPGGGVALLYASSVL 429
>sp|Q73I71|CH60_WOLPM 60 kDa chaperonin OS=Wolbachia pipientis wMel GN=groL PE=3 SV=1
Length = 549
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVL 35
+++A A +AA+EEGIVPGGGVALL+AS VL
Sbjct: 399 VEDALHATRAAIEEGIVPGGGVALLYASSVL 429
>sp|Q2RY28|CH601_RHORT 60 kDa chaperonin 1 OS=Rhodospirillum rubrum (strain ATCC 11170 /
NCIB 8255) GN=groL1 PE=3 SV=1
Length = 543
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVLSICS 39
+D+A A +AA+EEGI+ GGGVALLHA+K L S
Sbjct: 396 VDDAMHATRAAVEEGIIAGGGVALLHAAKALDALS 430
>sp|P35635|CH60_BARBA 60 kDa chaperonin OS=Bartonella bacilliformis GN=groL PE=1 SV=2
Length = 544
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/33 (63%), Positives = 26/33 (78%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVLSI 37
+D+A A +AA+EEGIVPGGG LL A+K LSI
Sbjct: 396 VDDALNATRAAVEEGIVPGGGTPLLRAAKALSI 428
>sp|P16625|CH60_ORITS 60 kDa chaperonin OS=Orientia tsutsugamushi GN=groL PE=3 SV=1
Length = 555
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/31 (64%), Positives = 27/31 (87%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVL 35
+++A A +AA+EEGIVPGGGVAL +AS+VL
Sbjct: 399 VEDALHATRAAVEEGIVPGGGVALFYASRVL 429
>sp|B3CQ26|CH60_ORITI 60 kDa chaperonin OS=Orientia tsutsugamushi (strain Ikeda) GN=groL
PE=3 SV=1
Length = 555
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/31 (64%), Positives = 27/31 (87%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVL 35
+++A A +AA+EEGIVPGGGVAL +AS+VL
Sbjct: 399 VEDALHATRAAVEEGIVPGGGVALFYASRVL 429
>sp|A5CDL9|CH60_ORITB 60 kDa chaperonin OS=Orientia tsutsugamushi (strain Boryong)
GN=groL PE=3 SV=1
Length = 554
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/31 (64%), Positives = 27/31 (87%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVL 35
+++A A +AA+EEGIVPGGGVAL +AS+VL
Sbjct: 399 VEDALHATRAAVEEGIVPGGGVALFYASRVL 429
>sp|Q43298|CH62_MAIZE Chaperonin CPN60-2, mitochondrial OS=Zea mays GN=CPN60II PE=2 SV=1
Length = 576
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/25 (84%), Positives = 23/25 (92%)
Query: 11 AVKAALEEGIVPGGGVALLHASKVL 35
A KAA+EEGIVPGGGVALL+ASK L
Sbjct: 435 ATKAAVEEGIVPGGGVALLYASKEL 459
>sp|Q05046|CH62_CUCMA Chaperonin CPN60-2, mitochondrial OS=Cucurbita maxima GN=CPN60-2
PE=1 SV=1
Length = 575
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/25 (84%), Positives = 23/25 (92%)
Query: 11 AVKAALEEGIVPGGGVALLHASKVL 35
A KAA+EEGIVPGGGVALL+ASK L
Sbjct: 433 ATKAAVEEGIVPGGGVALLYASKEL 457
>sp|P29185|CH61_MAIZE Chaperonin CPN60-1, mitochondrial OS=Zea mays GN=CPN60I PE=1 SV=2
Length = 577
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/25 (84%), Positives = 23/25 (92%)
Query: 11 AVKAALEEGIVPGGGVALLHASKVL 35
A KAA+EEGIVPGGGVALL+ASK L
Sbjct: 435 ATKAAVEEGIVPGGGVALLYASKEL 459
>sp|Q05045|CH61_CUCMA Chaperonin CPN60-1, mitochondrial OS=Cucurbita maxima GN=CPN60-1
PE=1 SV=1
Length = 575
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/25 (84%), Positives = 23/25 (92%)
Query: 11 AVKAALEEGIVPGGGVALLHASKVL 35
A KAA+EEGIVPGGGVALL+ASK L
Sbjct: 433 ATKAAVEEGIVPGGGVALLYASKEL 457
>sp|P35480|CH60_BRANA Chaperonin CPN60, mitochondrial OS=Brassica napus PE=2 SV=1
Length = 587
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/25 (84%), Positives = 23/25 (92%)
Query: 11 AVKAALEEGIVPGGGVALLHASKVL 35
A KAA+EEGIVPGGGVALL+ASK L
Sbjct: 436 ATKAAVEEGIVPGGGVALLYASKEL 460
>sp|Q8L7B5|CH60B_ARATH Chaperonin CPN60-like 1, mitochondrial OS=Arabidopsis thaliana
GN=At2g33210 PE=1 SV=1
Length = 585
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/25 (84%), Positives = 23/25 (92%)
Query: 11 AVKAALEEGIVPGGGVALLHASKVL 35
A KAA+EEGIVPGGGVALL+ASK L
Sbjct: 433 ATKAAVEEGIVPGGGVALLYASKEL 457
>sp|A5VBQ6|CH60_SPHWW 60 kDa chaperonin OS=Sphingomonas wittichii (strain RW1 / DSM 6014
/ JCM 10273) GN=groL PE=3 SV=1
Length = 549
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVL 35
+D+A A +AA+EEGIVPGGG ALL+A+K L
Sbjct: 396 VDDALHATRAAVEEGIVPGGGTALLYATKAL 426
>sp|Q2G2Z4|CH60_NOVAD 60 kDa chaperonin OS=Novosphingobium aromaticivorans (strain DSM
12444) GN=groL PE=3 SV=1
Length = 547
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVL 35
+D+A A +AA+EEGIVPGGG ALL+A+K L
Sbjct: 396 VDDALHATRAAVEEGIVPGGGTALLYATKAL 426
>sp|Q1GVZ9|CH601_SPHAL 60 kDa chaperonin 1 OS=Sphingopyxis alaskensis (strain DSM 13593 /
LMG 18877 / RB2256) GN=groL1 PE=3 SV=1
Length = 547
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVL 35
+D+A A +AA+EEGIVPGGG ALL+A+K L
Sbjct: 396 VDDALHATRAAVEEGIVPGGGTALLYATKAL 426
>sp|B0U418|CH60_XYLFM 60 kDa chaperonin OS=Xylella fastidiosa (strain M12) GN=groL PE=3
SV=1
Length = 547
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 31/38 (81%), Gaps = 3/38 (7%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVLSICSNLK 42
+D+A +A +AA+EEG++PGGGVAL+ +V++ SNLK
Sbjct: 396 VDDALLATRAAVEEGVIPGGGVALI---RVITAISNLK 430
>sp|Q98IV5|CH601_RHILO 60 kDa chaperonin 1 OS=Rhizobium loti (strain MAFF303099) GN=groL1
PE=3 SV=1
Length = 543
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/32 (65%), Positives = 25/32 (78%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVLS 36
+D+A A +AA+EEGIVPGGGVALL A LS
Sbjct: 396 IDDALNATRAAVEEGIVPGGGVALLRARSALS 427
>sp|Q89IK8|CH606_BRAJA 60 kDa chaperonin 6 OS=Bradyrhizobium japonicum (strain USDA 110)
GN=groL6 PE=3 SV=1
Length = 546
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVL 35
+D+A A +AA+EEGIVPGGGVALL AS+ L
Sbjct: 396 VDDAMHATRAAVEEGIVPGGGVALLRASEQL 426
>sp|P35862|CH603_BRAJA 60 kDa chaperonin 3 OS=Bradyrhizobium japonicum (strain USDA 110)
GN=groL3 PE=1 SV=2
Length = 546
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVL 35
+D+A A +AA+EEGIVPGGGVALL AS+ L
Sbjct: 396 VDDAMHATRAAVEEGIVPGGGVALLRASEQL 426
>sp|P60365|CH602_RHOPA 60 kDa chaperonin 2 OS=Rhodopseudomonas palustris (strain ATCC
BAA-98 / CGA009) GN=groL2 PE=3 SV=1
Length = 547
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVL 35
+D+A A +AA+EEGIVPGGGVALL AS+ L
Sbjct: 396 VDDAMHATRAAVEEGIVPGGGVALLRASEQL 426
>sp|Q07PA9|CH602_RHOP5 60 kDa chaperonin 2 OS=Rhodopseudomonas palustris (strain BisA53)
GN=groL2 PE=3 SV=1
Length = 546
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVL 35
+D+A A +AA+EEGIVPGGGVALL AS+ L
Sbjct: 396 VDDAMHATRAAVEEGIVPGGGVALLRASEQL 426
>sp|Q2IV30|CH602_RHOP2 60 kDa chaperonin 2 OS=Rhodopseudomonas palustris (strain HaA2)
GN=groL2 PE=3 SV=1
Length = 547
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVL 35
+D+A A +AA+EEGIVPGGGVALL AS+ L
Sbjct: 396 VDDAMHATRAAVEEGIVPGGGVALLRASEQL 426
>sp|Q3SQJ5|CH602_NITWN 60 kDa chaperonin 2 OS=Nitrobacter winogradskyi (strain Nb-255 /
ATCC 25391) GN=groL2 PE=3 SV=1
Length = 545
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVL 35
+D+A A +AA+EEGIVPGGGVALL AS+ L
Sbjct: 396 VDDAMHATRAAVEEGIVPGGGVALLRASEQL 426
>sp|Q1QK71|CH602_NITHX 60 kDa chaperonin 2 OS=Nitrobacter hamburgensis (strain X14 / DSM
10229) GN=groL2 PE=3 SV=1
Length = 546
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVL 35
+D+A A +AA+EEGIVPGGGVALL AS+ L
Sbjct: 396 VDDAMHATRAAVEEGIVPGGGVALLRASEQL 426
>sp|Q138M7|CH601_RHOPS 60 kDa chaperonin 1 OS=Rhodopseudomonas palustris (strain BisB5)
GN=groL1 PE=3 SV=1
Length = 547
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVL 35
+D+A A +AA+EEGIVPGGGVALL AS+ L
Sbjct: 396 VDDAMHATRAAVEEGIVPGGGVALLRASEQL 426
>sp|Q1QP32|CH601_NITHX 60 kDa chaperonin 1 OS=Nitrobacter hamburgensis (strain X14 / DSM
10229) GN=groL1 PE=3 SV=1
Length = 545
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVL 35
+D+A A +AA+EEGIVPGGGVALL AS+ L
Sbjct: 396 VDDAMHATRAAVEEGIVPGGGVALLRASEQL 426
>sp|Q7UM99|CH601_RHOBA 60 kDa chaperonin 1 OS=Rhodopirellula baltica (strain SH1) GN=groL1
PE=3 SV=2
Length = 571
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 30/53 (56%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVLSICSNLKTLISKLVLRFYRMLL 57
+D+AR A +AALEEGIVPGGG ALL + KL +R R +L
Sbjct: 397 IDDARAATQAALEEGIVPGGGTALLRCRAAVEKLEKATEGDQKLGVRIIRNVL 449
>sp|Q2JYW6|CH604_RHIEC 60 kDa chaperonin 4 OS=Rhizobium etli (strain CFN 42 / ATCC 51251)
GN=groL4 PE=3 SV=1
Length = 542
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 29/39 (74%), Gaps = 3/39 (7%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVLSICSNLKT 43
+D+A A +AA+EEGI+PGGGVALL A K L N+KT
Sbjct: 396 VDDALHATRAAVEEGILPGGGVALLRAVKAL---DNIKT 431
>sp|Q0C0T0|CH60_HYPNA 60 kDa chaperonin OS=Hyphomonas neptunium (strain ATCC 15444)
GN=groL PE=3 SV=1
Length = 547
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 27/33 (81%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVLSI 37
+D+A A +AA+EEGIVPGGGVALL +SK + +
Sbjct: 396 VDDALNATRAAVEEGIVPGGGVALLRSSKNIDV 428
>sp|Q93ZM7|CH60C_ARATH Chaperonin CPN60-like 2, mitochondrial OS=Arabidopsis thaliana
GN=At3g13860 PE=1 SV=2
Length = 572
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/33 (63%), Positives = 27/33 (81%), Gaps = 3/33 (9%)
Query: 11 AVKAALEEGIVPGGGVALLHASKVLSICSNLKT 43
A +AA+EEGI+PGGGVALL+A+K L NL+T
Sbjct: 432 ATRAAVEEGIIPGGGVALLYATKAL---DNLQT 461
>sp|A0KCS0|CH603_BURCH 60 kDa chaperonin 3 OS=Burkholderia cenocepacia (strain HI2424)
GN=groL3 PE=3 SV=1
Length = 540
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/32 (65%), Positives = 25/32 (78%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVLS 36
+D+A A +AA+EEGIVPGGGVALL A LS
Sbjct: 396 VDDALHATRAAVEEGIVPGGGVALLRARAALS 427
>sp|Q1BV70|CH602_BURCA 60 kDa chaperonin 2 OS=Burkholderia cenocepacia (strain AU 1054)
GN=groL2 PE=3 SV=1
Length = 540
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/32 (65%), Positives = 25/32 (78%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVLS 36
+D+A A +AA+EEGIVPGGGVALL A LS
Sbjct: 396 VDDALHATRAAVEEGIVPGGGVALLRARAALS 427
>sp|Q5GST5|CH60_WOLTR 60 kDa chaperonin OS=Wolbachia sp. subsp. Brugia malayi (strain
TRS) GN=groL PE=3 SV=1
Length = 550
Score = 43.5 bits (101), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVL 35
+++A A +AA+EEGIVPGGGVALL+AS L
Sbjct: 399 VEDALHATRAAIEEGIVPGGGVALLYASSAL 429
>sp|Q98IH9|CH602_RHILO 60 kDa chaperonin 2 OS=Rhizobium loti (strain MAFF303099) GN=groL2
PE=3 SV=1
Length = 542
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 26/31 (83%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVL 35
+D+A A +AA+EEG++PGGGVALL A+K L
Sbjct: 396 VDDAMHATRAAVEEGVLPGGGVALLRAAKAL 426
>sp|Q0AS40|CH60_MARMM 60 kDa chaperonin OS=Maricaulis maris (strain MCS10) GN=groL PE=3
SV=1
Length = 551
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/32 (65%), Positives = 26/32 (81%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVLS 36
+D+A A +AA+EEGIVPGGGVALL AS L+
Sbjct: 396 VDDALNATRAAVEEGIVPGGGVALLKASAKLA 427
>sp|Q1MJF2|CH60_RHIL3 60 kDa chaperonin OS=Rhizobium leguminosarum bv. viciae (strain
3841) GN=groL PE=3 SV=1
Length = 544
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/32 (62%), Positives = 25/32 (78%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVLS 36
+D+A A +AA+EEGIVPGGGVALL A L+
Sbjct: 396 IDDALNATRAAVEEGIVPGGGVALLRAKSALT 427
>sp|Q9L690|CH603_RHILE 60 kDa chaperonin 3 OS=Rhizobium leguminosarum GN=groL3 PE=3 SV=1
Length = 544
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/32 (62%), Positives = 25/32 (78%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVLS 36
+D+A A +AA+EEGIVPGGGVALL A L+
Sbjct: 396 IDDALNATRAAVEEGIVPGGGVALLRAKSALT 427
>sp|Q87BC0|CH60_XYLFT 60 kDa chaperonin OS=Xylella fastidiosa (strain Temecula1 / ATCC
700964) GN=groL PE=3 SV=1
Length = 547
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 30/38 (78%), Gaps = 3/38 (7%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVLSICSNLK 42
+D+A +A +AA+EEG++PGGGVAL+ A ++ SNLK
Sbjct: 396 VDDALLATRAAVEEGVIPGGGVALIRA---ITAISNLK 430
>sp|Q9PFP2|CH60_XYLFA 60 kDa chaperonin OS=Xylella fastidiosa (strain 9a5c) GN=groL PE=3
SV=1
Length = 547
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 30/38 (78%), Gaps = 3/38 (7%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVLSICSNLK 42
+D+A +A +AA+EEG++PGGGVAL+ A ++ SNLK
Sbjct: 396 VDDALLATRAAVEEGVIPGGGVALIRA---ITAISNLK 430
>sp|B2I7D4|CH60_XYLF2 60 kDa chaperonin OS=Xylella fastidiosa (strain M23) GN=groL PE=3
SV=1
Length = 547
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 30/38 (78%), Gaps = 3/38 (7%)
Query: 5 LDNARIAVKAALEEGIVPGGGVALLHASKVLSICSNLK 42
+D+A +A +AA+EEG++PGGGVAL+ A ++ SNLK
Sbjct: 396 VDDALLATRAAVEEGVIPGGGVALIRA---ITAISNLK 430
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.333 0.144 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,588,462
Number of Sequences: 539616
Number of extensions: 704948
Number of successful extensions: 4623
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 3557
Number of HSP's gapped (non-prelim): 1070
length of query: 91
length of database: 191,569,459
effective HSP length: 61
effective length of query: 30
effective length of database: 158,652,883
effective search space: 4759586490
effective search space used: 4759586490
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.5 bits)
S2: 55 (25.8 bits)