BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034572
(91 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3QZ2|A Chain A, The Structure Of Cysteine-Free Human Insulin Degrading
Enzyme
pdb|3QZ2|B Chain B, The Structure Of Cysteine-Free Human Insulin Degrading
Enzyme
pdb|4DTT|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme (ide)
In Complex With Compund 41367
pdb|4DTT|B Chain B, Crystal Structure Of Human Insulin Degrading Enzyme (ide)
In Complex With Compund 41367
Length = 990
Score = 69.7 bits (169), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%)
Query: 1 MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
++D++ +F+YI L+ G +W+F EL + V F ++DK P Y +A + YP
Sbjct: 358 VEDIILHMFQYIQKLRAEGPQEWVFQELKDLNAVAFRFKDKERPRGYTSKIAGILHYYPL 417
Query: 61 QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
++ L E L F P++I+M L +L P+ VR
Sbjct: 418 EEVLTAEYLLEEFRPDLIEMVLDKLRPENVR 448
>pdb|3E4Z|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme In
Complex With Insulin-Like Growth Factor Ii
pdb|3E4Z|B Chain B, Crystal Structure Of Human Insulin Degrading Enzyme In
Complex With Insulin-Like Growth Factor Ii
Length = 990
Score = 69.7 bits (169), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%)
Query: 1 MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
++D++ +F+YI L+ G +W+F EL + V F ++DK P Y +A + YP
Sbjct: 358 VEDIILHMFQYIQKLRAEGPQEWVFQELKDLNAVAFRFKDKERPRGYTSKIAGILHYYPL 417
Query: 61 QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
++ L E L F P++I+M L +L P+ VR
Sbjct: 418 EEVLTAEYLLEEFRPDLIEMVLDKLRPENVR 448
>pdb|2WBY|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Insulin
pdb|2WBY|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Insulin
pdb|2WC0|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme In
Complex With Iodinated Insulin
pdb|2WC0|B Chain B, Crystal Structure Of Human Insulin Degrading Enzyme In
Complex With Iodinated Insulin
pdb|3H44|A Chain A, Crystal Structure Of Insulin Degrading Enzyme In Complex
With Macrophage Inflammatory Protein 1 Alpha
pdb|3H44|B Chain B, Crystal Structure Of Insulin Degrading Enzyme In Complex
With Macrophage Inflammatory Protein 1 Alpha
pdb|3OFI|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Ubiquitin
pdb|3OFI|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Ubiquitin
pdb|3N56|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme (Ide)
In Complex With Human B-Type Natriuretic Peptide (Bnp)
pdb|3N56|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme (Ide)
In Complex With Human B-Type Natriuretic Peptide (Bnp)
pdb|3N57|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme (Ide)
In Complex With Human Atrial Natriuretic Peptide (Anp)
pdb|3N57|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme (Ide)
In Complex With Human Atrial Natriuretic Peptide (Anp)
pdb|2YPU|A Chain A, Human Insulin Degrading Enzyme E111q In Complex With
Inhibitor Compound 41367
pdb|2YPU|B Chain B, Human Insulin Degrading Enzyme E111q In Complex With
Inhibitor Compound 41367
Length = 990
Score = 69.7 bits (169), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%)
Query: 1 MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
++D++ +F+YI L+ G +W+F EL + V F ++DK P Y +A + YP
Sbjct: 358 VEDIILHMFQYIQKLRAEGPQEWVFQELKDLNAVAFRFKDKERPRGYTSKIAGILHYYPL 417
Query: 61 QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
++ L E L F P++I+M L +L P+ VR
Sbjct: 418 EEVLTAEYLLEEFRPDLIEMVLDKLRPENVR 448
>pdb|3CWW|A Chain A, Crystal Structure Of Ide-Bradykinin Complex
pdb|3CWW|B Chain B, Crystal Structure Of Ide-Bradykinin Complex
Length = 990
Score = 69.7 bits (169), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%)
Query: 1 MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
++D++ +F+YI L+ G +W+F EL + V F ++DK P Y +A + YP
Sbjct: 358 VEDIILHMFQYIQKLRAEGPQEWVFQELKDLNAVAFRFKDKERPRGYTSKIAGILHYYPL 417
Query: 61 QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
++ L E L F P++I+M L +L P+ VR
Sbjct: 418 EEVLTAEYLLEEFRPDLIEMVLDKLRPENVR 448
>pdb|3HGZ|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amylin
pdb|3HGZ|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amylin
Length = 969
Score = 69.7 bits (169), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%)
Query: 1 MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
++D++ +F+YI L+ G +W+F EL + V F ++DK P Y +A + YP
Sbjct: 345 VEDIILHMFQYIQKLRAEGPQEWVFQELKDLNAVAFRFKDKERPRGYTSKIAGILHYYPL 404
Query: 61 QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
++ L E L F P++I+M L +L P+ VR
Sbjct: 405 EEVLTAEYLLEEFRPDLIEMVLDKLRPENVR 435
>pdb|3E4A|A Chain A, Human Ide-Inhibitor Complex At 2.6 Angstrom Resolution
pdb|3E4A|B Chain B, Human Ide-Inhibitor Complex At 2.6 Angstrom Resolution
pdb|2WK3|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amyloid-Beta (1-42)
pdb|2WK3|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amyloid-Beta (1-42)
Length = 1019
Score = 69.7 bits (169), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%)
Query: 1 MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
++D++ +F+YI L+ G +W+F EL + V F ++DK P Y +A + YP
Sbjct: 387 VEDIILHMFQYIQKLRAEGPQEWVFQELKDLNAVAFRFKDKERPRGYTSKIAGILHYYPL 446
Query: 61 QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
++ L E L F P++I+M L +L P+ VR
Sbjct: 447 EEVLTAEYLLEEFRPDLIEMVLDKLRPENVR 477
>pdb|2G47|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amyloid-Beta (1-40)
pdb|2G47|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amyloid-Beta (1-40)
pdb|2G48|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amylin
pdb|2G48|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amylin
pdb|2G49|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Glucagon
pdb|2G49|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Glucagon
pdb|2G54|A Chain A, Crystal Structure Of Zn-Bound Human Insulin-Degrading
Enzyme In Complex With Insulin B Chain
pdb|2G54|B Chain B, Crystal Structure Of Zn-Bound Human Insulin-Degrading
Enzyme In Complex With Insulin B Chain
pdb|2G56|A Chain A, Crystal Structure Of Human Insulin-degrading Enzyme In
Complex With Insulin B Chain
pdb|2G56|B Chain B, Crystal Structure Of Human Insulin-degrading Enzyme In
Complex With Insulin B Chain
pdb|2JBU|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme
Complexed With Co-Purified Peptides.
pdb|2JBU|B Chain B, Crystal Structure Of Human Insulin Degrading Enzyme
Complexed With Co-Purified Peptides.
pdb|3E50|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme In
Complex With Transforming Growth Factor-Alpha
pdb|3E50|B Chain B, Crystal Structure Of Human Insulin Degrading Enzyme In
Complex With Transforming Growth Factor-Alpha
Length = 990
Score = 67.4 bits (163), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%)
Query: 1 MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
++D++ +F+YI L+ G +W+F E + V F ++DK P Y +A + YP
Sbjct: 358 VEDIILHMFQYIQKLRAEGPQEWVFQECKDLNAVAFRFKDKERPRGYTSKIAGILHYYPL 417
Query: 61 QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
++ L E L F P++I+M L +L P+ VR
Sbjct: 418 EEVLTAEYLLEEFRPDLIEMVLDKLRPENVR 448
>pdb|2JG4|A Chain A, Substrate-Free Ide Structure In Its Closed Conformation
pdb|2JG4|B Chain B, Substrate-Free Ide Structure In Its Closed Conformation
Length = 990
Score = 67.4 bits (163), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%)
Query: 1 MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
++D++ +F+YI L+ G +W+F E + V F ++DK P Y +A + YP
Sbjct: 358 VEDIILHMFQYIQKLRAEGPQEWVFQECKDLNAVAFRFKDKERPRGYTSKIAGILHYYPL 417
Query: 61 QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
++ L E L F P++I+M L +L P+ VR
Sbjct: 418 EEVLTAEYLLEEFRPDLIEMVLDKLRPENVR 448
>pdb|3P7L|A Chain A, Rat Insulin Degrading Enzyme (Insulysin)
Length = 978
Score = 66.6 bits (161), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%)
Query: 1 MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
++D++ +F+YI L+ G +W+F E + V F ++DK P Y +A + YP
Sbjct: 346 VEDIILHMFQYIQKLRAEGPQEWVFQECKDLNAVAFRFKDKERPRGYTSKIAGKLHYYPL 405
Query: 61 QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
L E L F P++I M L +L P+ VR
Sbjct: 406 NGVLTAEYLLEEFRPDLIDMVLDKLRPENVR 436
>pdb|3P7O|A Chain A, Rat Insulin Degrading Enzyme (Insulysin) E111f Mutant With
Two Bound Peptides
Length = 1019
Score = 66.6 bits (161), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%)
Query: 1 MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
++D++ +F+YI L+ G +W+F E + V F ++DK P Y +A + YP
Sbjct: 387 VEDIILHMFQYIQKLRAEGPQEWVFQECKDLNAVAFRFKDKERPRGYTSKIAGKLHYYPL 446
Query: 61 QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
L E L F P++I M L +L P+ VR
Sbjct: 447 NGVLTAEYLLEEFRPDLIDMVLDKLRPENVR 477
>pdb|3TUV|A Chain A, Crystal Structure Of Insulysin With Bound Atp
Length = 1019
Score = 66.6 bits (161), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%)
Query: 1 MQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPP 60
++D++ +F+YI L+ G +W+F E + V F ++DK P Y +A + YP
Sbjct: 387 VEDIILHMFQYIQKLRAEGPQEWVFQECKDLNAVAFRFKDKERPRGYTSKIAGKLHYYPL 446
Query: 61 QDWLVGESLPSNFNPEIIQMTLKELSPKTVR 91
L E L F P++I M L +L P+ VR
Sbjct: 447 NGVLTAEYLLEEFRPDLIDMVLDKLRPENVR 477
>pdb|1Q2L|A Chain A, Crystal Structure Of Pitrilysin
Length = 939
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%)
Query: 4 VVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVAANMETYPPQDW 63
VV +F Y+NLL++ G K FDEL+ V ++ F Y +DYV +A M P +
Sbjct: 345 VVAAIFSYLNLLREKGIDKQYFDELANVLDIDFRYPSITRDMDYVEWLADTMIRVPVEHT 404
Query: 64 LVGESLPSNFNPEIIQMTLKELSPKTVR 91
L ++ ++ + ++ L ++P+ R
Sbjct: 405 LDAVNIADRYDAKAVKERLAMMTPQNAR 432
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,896,182
Number of Sequences: 62578
Number of extensions: 99356
Number of successful extensions: 163
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 151
Number of HSP's gapped (non-prelim): 12
length of query: 91
length of database: 14,973,337
effective HSP length: 58
effective length of query: 33
effective length of database: 11,343,813
effective search space: 374345829
effective search space used: 374345829
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 45 (21.9 bits)