Query 034578
Match_columns 90
No_of_seqs 186 out of 1004
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 06:35:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034578.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034578hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a6d_A Hydroxyindole O-methylt 99.8 3.2E-20 1.1E-24 127.0 7.8 87 1-90 160-253 (353)
2 3p9c_A Caffeic acid O-methyltr 99.8 1.2E-18 4E-23 119.6 10.1 87 2-90 182-268 (364)
3 3reo_A (ISO)eugenol O-methyltr 99.8 1.2E-18 4.2E-23 119.6 10.1 87 2-90 184-270 (368)
4 1fp1_D Isoliquiritigenin 2'-O- 99.7 2.6E-17 8.9E-22 112.8 10.0 86 3-90 191-276 (372)
5 1fp2_A Isoflavone O-methyltran 99.7 1.7E-17 5.7E-22 113.0 8.8 85 4-90 171-255 (352)
6 1zg3_A Isoflavanone 4'-O-methy 99.7 2.2E-17 7.6E-22 112.6 8.0 79 11-90 182-260 (358)
7 3gwz_A MMCR; methyltransferase 99.7 3E-17 1E-21 112.5 8.3 84 4-90 186-277 (369)
8 3lst_A CALO1 methyltransferase 99.7 5.3E-17 1.8E-21 110.4 9.2 85 3-90 167-256 (348)
9 3i53_A O-methyltransferase; CO 99.7 1.6E-17 5.5E-22 112.1 5.9 81 7-90 156-244 (332)
10 1qzz_A RDMB, aclacinomycin-10- 99.7 4.7E-16 1.6E-20 106.1 9.1 86 2-90 164-257 (374)
11 2ip2_A Probable phenazine-spec 99.7 2.4E-16 8.2E-21 106.2 7.4 84 3-90 151-242 (334)
12 1tw3_A COMT, carminomycin 4-O- 99.6 5.5E-16 1.9E-20 105.4 8.1 85 3-90 166-258 (360)
13 1x19_A CRTF-related protein; m 99.6 4.8E-16 1.6E-20 105.9 7.6 81 7-90 177-265 (359)
14 3dp7_A SAM-dependent methyltra 99.6 3.1E-16 1.1E-20 107.3 5.2 69 22-90 178-257 (363)
15 2r3s_A Uncharacterized protein 99.6 2.5E-15 8.5E-20 101.0 8.9 87 1-90 144-241 (335)
16 3mcz_A O-methyltransferase; ad 99.6 1.8E-15 6.2E-20 102.5 7.3 77 11-90 169-257 (352)
17 4gek_A TRNA (CMO5U34)-methyltr 99.6 1.4E-14 4.7E-19 95.8 8.9 68 22-89 69-147 (261)
18 3ege_A Putative methyltransfer 99.5 7.9E-14 2.7E-18 91.2 10.0 80 6-90 20-103 (261)
19 4hg2_A Methyltransferase type 99.5 1.4E-13 4.7E-18 90.9 9.6 65 23-89 39-107 (257)
20 3dtn_A Putative methyltransfer 99.5 1.8E-13 6E-18 87.7 9.7 79 10-90 33-118 (234)
21 3ujc_A Phosphoethanolamine N-m 99.5 1.3E-13 4.3E-18 89.4 8.8 81 6-90 41-129 (266)
22 2p35_A Trans-aconitate 2-methy 99.5 1.7E-13 5.8E-18 88.7 8.4 84 4-90 17-104 (259)
23 1nkv_A Hypothetical protein YJ 99.5 3.4E-13 1.2E-17 87.3 9.6 81 5-89 21-111 (256)
24 3e05_A Precorrin-6Y C5,15-meth 99.5 2.6E-13 8.8E-18 85.7 8.6 80 7-89 27-116 (204)
25 3dlc_A Putative S-adenosyl-L-m 99.5 1.2E-13 4.2E-18 87.0 6.7 80 6-90 30-120 (219)
26 1nv8_A HEMK protein; class I a 99.5 8.6E-14 2.9E-18 92.8 6.2 80 5-88 108-199 (284)
27 3f4k_A Putative methyltransfer 99.5 5.8E-13 2E-17 86.2 9.8 80 7-89 32-122 (257)
28 3jwg_A HEN1, methyltransferase 99.5 9.9E-14 3.4E-18 88.2 5.6 82 6-90 15-111 (219)
29 3bus_A REBM, methyltransferase 99.5 3E-13 1E-17 88.3 8.0 81 5-89 46-137 (273)
30 3kr9_A SAM-dependent methyltra 99.4 1.3E-13 4.5E-18 89.8 6.1 67 23-89 15-92 (225)
31 3jwh_A HEN1; methyltransferase 99.4 1.2E-13 4.2E-18 87.8 5.9 82 6-90 15-111 (217)
32 3kkz_A Uncharacterized protein 99.4 5.9E-13 2E-17 87.0 9.0 80 7-89 32-122 (267)
33 3mgg_A Methyltransferase; NYSG 99.4 2.7E-13 9.1E-18 88.8 7.4 70 21-90 35-114 (276)
34 3gu3_A Methyltransferase; alph 99.4 3.9E-13 1.3E-17 88.9 8.2 83 6-90 7-98 (284)
35 3g07_A 7SK snRNA methylphospha 99.4 4.4E-13 1.5E-17 89.3 8.1 42 23-64 46-88 (292)
36 1vl5_A Unknown conserved prote 99.4 2.9E-13 1E-17 88.1 7.0 79 6-89 23-111 (260)
37 2o57_A Putative sarcosine dime 99.4 4E-13 1.4E-17 88.9 7.1 81 5-89 63-158 (297)
38 3dh0_A SAM dependent methyltra 99.4 4.2E-13 1.4E-17 85.1 6.6 80 8-90 25-115 (219)
39 2yxd_A Probable cobalt-precorr 99.4 1.9E-13 6.5E-18 84.0 4.7 80 5-89 20-108 (183)
40 3lec_A NADB-rossmann superfami 99.4 3.5E-13 1.2E-17 88.0 6.1 67 23-89 21-98 (230)
41 3gnl_A Uncharacterized protein 99.4 2.4E-13 8E-18 89.5 5.3 67 23-89 21-98 (244)
42 3uwp_A Histone-lysine N-methyl 99.4 5E-13 1.7E-17 93.7 7.0 81 6-89 159-260 (438)
43 1pjz_A Thiopurine S-methyltran 99.4 3.4E-13 1.2E-17 85.6 5.7 73 11-88 13-108 (203)
44 3ccf_A Cyclopropane-fatty-acyl 99.4 4.7E-13 1.6E-17 88.0 6.5 79 7-90 44-126 (279)
45 3vc1_A Geranyl diphosphate 2-C 99.4 7.2E-13 2.5E-17 88.6 7.5 78 9-89 105-193 (312)
46 2b3t_A Protein methyltransfera 99.4 7.3E-13 2.5E-17 87.4 7.1 80 5-88 95-183 (276)
47 1ve3_A Hypothetical protein PH 99.4 6.7E-13 2.3E-17 84.3 6.6 65 23-89 38-111 (227)
48 3hm2_A Precorrin-6Y C5,15-meth 99.4 6.4E-13 2.2E-17 81.7 6.1 79 7-89 12-102 (178)
49 1xxl_A YCGJ protein; structura 99.4 1.1E-12 3.7E-17 84.7 7.4 81 4-89 5-95 (239)
50 3q87_B N6 adenine specific DNA 99.4 1.2E-12 4.1E-17 81.1 7.2 60 23-88 23-85 (170)
51 3hem_A Cyclopropane-fatty-acyl 99.4 1.3E-12 4.6E-17 86.8 7.9 77 8-89 60-145 (302)
52 3ou2_A SAM-dependent methyltra 99.4 4.4E-12 1.5E-16 80.0 9.7 78 9-90 34-116 (218)
53 4dcm_A Ribosomal RNA large sub 99.4 1.7E-12 5.8E-17 89.6 8.4 76 10-88 212-299 (375)
54 4dzr_A Protein-(glutamine-N5) 99.4 1.1E-13 3.8E-18 87.0 1.9 82 5-88 14-108 (215)
55 3g5l_A Putative S-adenosylmeth 99.4 2.3E-12 7.7E-17 83.5 8.1 76 11-90 35-117 (253)
56 1jsx_A Glucose-inhibited divis 99.4 1E-12 3.4E-17 82.8 6.2 83 6-88 48-139 (207)
57 3g5t_A Trans-aconitate 3-methy 99.4 3.2E-12 1.1E-16 84.8 8.8 68 22-89 35-121 (299)
58 3mb5_A SAM-dependent methyltra 99.4 2.7E-12 9.2E-17 83.3 8.1 78 8-88 81-169 (255)
59 1yzh_A TRNA (guanine-N(7)-)-me 99.4 2.6E-12 8.8E-17 81.7 7.8 66 23-88 41-118 (214)
60 3njr_A Precorrin-6Y methylase; 99.4 2.3E-12 7.8E-17 82.0 7.4 76 8-88 43-129 (204)
61 1xtp_A LMAJ004091AAA; SGPP, st 99.4 1.1E-12 3.7E-17 84.7 5.7 77 10-90 83-167 (254)
62 2h00_A Methyltransferase 10 do 99.4 1.9E-12 6.5E-17 84.1 6.8 66 23-88 65-147 (254)
63 1kpg_A CFA synthase;, cyclopro 99.3 2.5E-12 8.6E-17 84.7 7.1 78 7-89 51-137 (287)
64 3l8d_A Methyltransferase; stru 99.3 8.8E-12 3E-16 79.9 9.5 66 23-90 53-125 (242)
65 3hnr_A Probable methyltransfer 99.3 2.3E-12 8E-17 81.7 6.5 76 10-90 35-115 (220)
66 3mti_A RRNA methylase; SAM-dep 99.3 4.3E-12 1.5E-16 78.8 7.5 65 22-88 21-96 (185)
67 3dxy_A TRNA (guanine-N(7)-)-me 99.3 1.7E-12 6E-17 83.5 5.7 66 23-88 34-112 (218)
68 2p7i_A Hypothetical protein; p 99.3 1.9E-12 6.5E-17 82.8 5.9 77 10-90 31-112 (250)
69 1fbn_A MJ fibrillarin homologu 99.3 1.7E-11 5.8E-16 78.8 10.3 77 8-87 59-149 (230)
70 3ofk_A Nodulation protein S; N 99.3 4.5E-12 1.6E-16 80.2 7.0 67 21-89 49-122 (216)
71 3ntv_A MW1564 protein; rossman 99.3 1.4E-12 4.8E-17 84.2 4.7 67 22-88 70-149 (232)
72 1nt2_A Fibrillarin-like PRE-rR 99.3 1.2E-11 4.1E-16 79.1 9.0 80 8-88 43-133 (210)
73 3bkx_A SAM-dependent methyltra 99.3 1.6E-12 5.4E-17 85.0 4.8 81 6-89 29-130 (275)
74 3mq2_A 16S rRNA methyltransfer 99.3 1.1E-11 3.7E-16 78.8 8.4 73 11-86 18-103 (218)
75 1yb2_A Hypothetical protein TA 99.3 4.1E-12 1.4E-16 83.8 6.6 74 11-87 101-185 (275)
76 3dli_A Methyltransferase; PSI- 99.3 4.8E-12 1.6E-16 81.6 6.8 78 7-90 27-110 (240)
77 2fk8_A Methoxy mycolic acid sy 99.3 3.1E-12 1.1E-16 85.5 5.9 79 6-89 76-163 (318)
78 3fzg_A 16S rRNA methylase; met 99.3 2.9E-12 9.9E-17 81.9 5.5 67 22-90 48-124 (200)
79 4fsd_A Arsenic methyltransfera 99.3 5.3E-12 1.8E-16 86.9 7.2 68 23-90 83-175 (383)
80 3g89_A Ribosomal RNA small sub 99.3 2.6E-12 8.9E-17 84.2 5.4 68 22-89 79-159 (249)
81 3ggd_A SAM-dependent methyltra 99.3 6E-12 2.1E-16 81.1 7.0 68 21-90 54-133 (245)
82 1zq9_A Probable dimethyladenos 99.3 5.4E-12 1.9E-16 84.1 6.9 78 6-88 14-100 (285)
83 3lbf_A Protein-L-isoaspartate 99.3 9.7E-12 3.3E-16 78.5 7.7 79 6-89 63-151 (210)
84 2pwy_A TRNA (adenine-N(1)-)-me 99.3 1.1E-11 3.7E-16 80.3 8.1 77 9-88 85-173 (258)
85 2xvm_A Tellurite resistance pr 99.3 1.2E-11 4E-16 77.0 8.0 75 10-89 22-105 (199)
86 2yqz_A Hypothetical protein TT 99.3 5.4E-12 1.8E-16 81.7 6.6 67 21-89 37-112 (263)
87 3b3j_A Histone-arginine methyl 99.3 1.1E-11 3.8E-16 88.0 8.7 79 7-89 145-232 (480)
88 2yxe_A Protein-L-isoaspartate 99.3 5.6E-12 1.9E-16 79.9 6.5 80 7-89 64-154 (215)
89 3pfg_A N-methyltransferase; N, 99.3 7.5E-12 2.6E-16 81.5 7.2 65 23-89 50-118 (263)
90 3g2m_A PCZA361.24; SAM-depende 99.3 3.4E-12 1.2E-16 84.7 5.6 76 7-88 70-157 (299)
91 2ozv_A Hypothetical protein AT 99.3 8.9E-12 3E-16 81.9 7.5 68 21-88 34-122 (260)
92 3m33_A Uncharacterized protein 99.3 1.5E-11 5.1E-16 78.8 8.3 76 7-88 36-118 (226)
93 2fca_A TRNA (guanine-N(7)-)-me 99.3 5E-12 1.7E-16 80.8 6.0 66 23-88 38-115 (213)
94 2qe6_A Uncharacterized protein 99.3 1.3E-11 4.3E-16 81.9 8.1 68 23-90 77-166 (274)
95 1dus_A MJ0882; hypothetical pr 99.3 1.9E-11 6.4E-16 75.5 8.3 78 7-89 39-127 (194)
96 1xdz_A Methyltransferase GIDB; 99.3 4E-12 1.4E-16 82.2 5.4 68 22-89 69-149 (240)
97 2pjd_A Ribosomal RNA small sub 99.3 5E-12 1.7E-16 85.9 6.1 78 9-89 185-269 (343)
98 3grz_A L11 mtase, ribosomal pr 99.3 2.8E-11 9.4E-16 76.2 9.1 66 23-89 60-133 (205)
99 1jg1_A PIMT;, protein-L-isoasp 99.3 6.7E-12 2.3E-16 80.9 6.3 80 6-89 77-166 (235)
100 1wzn_A SAM-dependent methyltra 99.3 1.5E-11 5.2E-16 79.4 7.7 65 22-88 40-112 (252)
101 2esr_A Methyltransferase; stru 99.3 3.2E-12 1.1E-16 78.8 4.3 81 5-88 15-107 (177)
102 3ocj_A Putative exported prote 99.3 1.7E-12 5.9E-17 86.5 3.2 69 21-89 116-195 (305)
103 3gru_A Dimethyladenosine trans 99.3 1.6E-11 5.4E-16 82.6 7.9 77 7-88 37-121 (295)
104 3tma_A Methyltransferase; thum 99.3 5.6E-12 1.9E-16 85.9 5.7 82 4-88 187-279 (354)
105 1o54_A SAM-dependent O-methylt 99.3 1.1E-11 3.8E-16 81.6 6.9 77 9-88 101-188 (277)
106 2fhp_A Methylase, putative; al 99.3 5.1E-12 1.7E-16 78.1 4.9 81 5-88 28-123 (187)
107 3bkw_A MLL3908 protein, S-aden 99.3 2.2E-11 7.5E-16 78.0 7.9 76 11-90 34-116 (243)
108 2gb4_A Thiopurine S-methyltran 99.3 8.2E-12 2.8E-16 82.1 6.0 64 23-88 68-159 (252)
109 3eey_A Putative rRNA methylase 99.3 8.3E-12 2.8E-16 78.1 5.7 68 21-88 20-100 (197)
110 3fpf_A Mtnas, putative unchara 99.3 1.7E-11 6E-16 82.6 7.5 68 21-88 120-195 (298)
111 2ex4_A Adrenal gland protein A 99.3 6.3E-12 2.1E-16 81.0 5.0 67 23-90 79-155 (241)
112 3ckk_A TRNA (guanine-N(7)-)-me 99.2 1.8E-11 6E-16 79.7 7.0 66 23-88 46-130 (235)
113 3gjy_A Spermidine synthase; AP 99.2 1.1E-11 3.6E-16 84.3 6.1 64 25-88 91-166 (317)
114 4htf_A S-adenosylmethionine-de 99.2 1.3E-11 4.4E-16 81.3 6.3 65 24-90 69-145 (285)
115 1vbf_A 231AA long hypothetical 99.2 2.8E-11 9.6E-16 77.3 7.7 78 7-89 57-142 (231)
116 3e23_A Uncharacterized protein 99.2 7.3E-12 2.5E-16 79.1 4.8 67 22-90 42-111 (211)
117 1o9g_A RRNA methyltransferase; 99.2 7.7E-12 2.6E-16 81.2 5.0 55 7-64 38-95 (250)
118 3iv6_A Putative Zn-dependent a 99.2 1.7E-11 5.7E-16 81.3 6.7 78 7-89 32-118 (261)
119 1g8a_A Fibrillarin-like PRE-rR 99.2 5.5E-11 1.9E-15 76.0 8.9 81 8-88 58-150 (227)
120 3bxo_A N,N-dimethyltransferase 99.2 3E-11 1E-15 77.2 7.6 63 23-87 40-106 (239)
121 3m70_A Tellurite resistance pr 99.2 1.8E-11 6E-16 80.7 6.6 75 10-89 110-192 (286)
122 2ipx_A RRNA 2'-O-methyltransfe 99.2 4E-11 1.4E-15 77.1 8.1 68 21-88 75-154 (233)
123 2pxx_A Uncharacterized protein 99.2 1.5E-11 5.3E-16 77.2 6.1 66 22-88 41-114 (215)
124 3h2b_A SAM-dependent methyltra 99.2 7.4E-12 2.5E-16 78.6 4.5 64 24-89 42-110 (203)
125 1p91_A Ribosomal RNA large sub 99.2 3.1E-11 1.1E-15 78.8 7.7 67 23-89 85-156 (269)
126 3lpm_A Putative methyltransfer 99.2 1.1E-11 3.9E-16 81.0 5.6 67 21-88 46-126 (259)
127 3ftd_A Dimethyladenosine trans 99.2 3.7E-11 1.3E-15 78.9 7.9 80 6-89 17-102 (249)
128 2bm8_A Cephalosporin hydroxyla 99.2 1.4E-11 4.7E-16 80.1 5.8 66 23-88 81-159 (236)
129 2plw_A Ribosomal RNA methyltra 99.2 6.5E-11 2.2E-15 74.1 8.7 63 9-77 10-74 (201)
130 1qam_A ERMC' methyltransferase 99.2 3.2E-11 1.1E-15 78.7 7.5 71 5-80 15-91 (244)
131 2h1r_A Dimethyladenosine trans 99.2 7.8E-12 2.7E-16 83.9 4.7 78 6-88 28-113 (299)
132 2fyt_A Protein arginine N-meth 99.2 3.1E-11 1.1E-15 82.1 7.7 76 10-89 54-139 (340)
133 3dr5_A Putative O-methyltransf 99.2 1.5E-11 5.1E-16 79.3 5.8 64 25-88 58-136 (221)
134 3lcc_A Putative methyl chlorid 99.2 1.5E-11 5E-16 79.0 5.7 64 24-89 67-140 (235)
135 1l3i_A Precorrin-6Y methyltran 99.2 8.5E-12 2.9E-16 77.0 4.3 80 5-89 18-108 (192)
136 3e8s_A Putative SAM dependent 99.2 9.8E-12 3.3E-16 78.6 4.7 76 10-90 42-125 (227)
137 3orh_A Guanidinoacetate N-meth 99.2 4.9E-12 1.7E-16 82.0 3.3 77 6-87 47-134 (236)
138 3sm3_A SAM-dependent methyltra 99.2 3.7E-11 1.3E-15 76.3 7.4 66 23-90 30-110 (235)
139 3q7e_A Protein arginine N-meth 99.2 1.9E-11 6.6E-16 83.4 6.4 67 22-89 65-141 (349)
140 3htx_A HEN1; HEN1, small RNA m 99.2 1.9E-11 6.6E-16 91.6 6.7 80 8-90 709-805 (950)
141 1m6y_A S-adenosyl-methyltransf 99.2 2.1E-11 7.3E-16 82.2 6.3 79 7-88 13-105 (301)
142 3p9n_A Possible methyltransfer 99.2 1.1E-11 3.8E-16 77.3 4.6 82 6-88 27-120 (189)
143 3i9f_A Putative type 11 methyl 99.2 3E-12 1E-16 78.4 2.0 73 11-90 8-84 (170)
144 3adn_A Spermidine synthase; am 99.2 2.1E-11 7.2E-16 81.8 6.3 65 23-87 83-163 (294)
145 1dl5_A Protein-L-isoaspartate 99.2 2.5E-11 8.6E-16 81.6 6.6 80 7-89 62-152 (317)
146 3uzu_A Ribosomal RNA small sub 99.2 9.1E-12 3.1E-16 83.2 4.3 72 7-81 29-106 (279)
147 3thr_A Glycine N-methyltransfe 99.2 1.3E-11 4.4E-16 81.4 4.8 77 7-88 44-137 (293)
148 2gpy_A O-methyltransferase; st 99.2 9.5E-12 3.2E-16 79.9 4.0 68 22-89 53-134 (233)
149 1zx0_A Guanidinoacetate N-meth 99.2 8.9E-12 3E-16 80.3 3.9 64 23-87 60-134 (236)
150 3duw_A OMT, O-methyltransferas 99.2 5.1E-12 1.7E-16 80.5 2.7 67 22-88 57-140 (223)
151 3u81_A Catechol O-methyltransf 99.2 1E-11 3.5E-16 79.4 4.1 67 23-89 58-142 (221)
152 2y1w_A Histone-arginine methyl 99.2 6.6E-11 2.3E-15 80.6 8.2 77 9-89 39-124 (348)
153 3gdh_A Trimethylguanosine synt 99.2 5.6E-12 1.9E-16 81.2 2.7 64 23-88 78-151 (241)
154 3id6_C Fibrillarin-like rRNA/T 99.2 1.8E-10 6.1E-15 75.2 9.8 85 4-88 57-153 (232)
155 3tm4_A TRNA (guanine N2-)-meth 99.2 2.3E-11 8E-16 83.6 5.8 80 5-88 203-293 (373)
156 3tfw_A Putative O-methyltransf 99.2 6.3E-12 2.2E-16 81.9 2.8 67 22-88 62-143 (248)
157 2b25_A Hypothetical protein; s 99.2 7.5E-11 2.5E-15 79.7 8.1 77 9-88 94-194 (336)
158 1u2z_A Histone-lysine N-methyl 99.2 4.6E-11 1.6E-15 84.0 7.2 79 8-89 230-331 (433)
159 3d2l_A SAM-dependent methyltra 99.2 4.9E-11 1.7E-15 76.4 6.7 63 23-88 33-103 (243)
160 1ne2_A Hypothetical protein TA 99.2 5E-11 1.7E-15 74.9 6.4 64 23-88 51-117 (200)
161 3tr6_A O-methyltransferase; ce 99.2 9.6E-12 3.3E-16 79.3 3.0 66 23-88 64-147 (225)
162 2frn_A Hypothetical protein PH 99.2 5.5E-11 1.9E-15 78.8 6.7 65 23-88 125-199 (278)
163 2ift_A Putative methylase HI07 99.2 6.9E-12 2.4E-16 79.5 2.3 65 23-88 53-132 (201)
164 3cgg_A SAM-dependent methyltra 99.2 1.1E-10 3.6E-15 72.1 7.5 64 23-88 46-114 (195)
165 2p8j_A S-adenosylmethionine-de 99.2 3.9E-11 1.3E-15 75.3 5.6 68 21-89 21-97 (209)
166 3k0b_A Predicted N6-adenine-sp 99.2 5.3E-11 1.8E-15 82.7 6.8 83 3-88 184-314 (393)
167 2ih2_A Modification methylase 99.2 6E-11 2E-15 81.8 7.0 77 6-88 25-105 (421)
168 1af7_A Chemotaxis receptor met 99.2 4.5E-11 1.5E-15 79.7 6.1 67 24-90 106-222 (274)
169 3fut_A Dimethyladenosine trans 99.2 4.7E-11 1.6E-15 79.5 6.0 75 7-87 34-116 (271)
170 1i9g_A Hypothetical protein RV 99.2 8.3E-11 2.8E-15 77.1 7.0 78 8-88 87-178 (280)
171 3evz_A Methyltransferase; NYSG 99.2 1.5E-10 5E-15 73.9 8.0 67 21-88 53-130 (230)
172 1g6q_1 HnRNP arginine N-methyl 99.2 6.4E-11 2.2E-15 80.1 6.6 67 22-89 37-113 (328)
173 3a27_A TYW2, uncharacterized p 99.2 7E-11 2.4E-15 78.2 6.6 68 21-88 117-193 (272)
174 3r0q_C Probable protein argini 99.2 8.6E-11 2.9E-15 80.9 7.2 77 9-89 52-137 (376)
175 2vdv_E TRNA (guanine-N(7)-)-me 99.2 1.2E-10 4.2E-15 75.5 7.6 66 23-88 49-135 (246)
176 1ws6_A Methyltransferase; stru 99.2 8.2E-12 2.8E-16 76.1 1.9 80 6-88 25-117 (171)
177 3ldu_A Putative methylase; str 99.2 5.5E-11 1.9E-15 82.3 6.2 82 4-88 179-308 (385)
178 1wy7_A Hypothetical protein PH 99.1 1E-10 3.5E-15 73.6 6.8 64 23-88 49-119 (207)
179 1y8c_A S-adenosylmethionine-de 99.1 4.8E-11 1.6E-15 76.3 5.2 65 23-89 37-109 (246)
180 2kw5_A SLR1183 protein; struct 99.1 1.6E-10 5.6E-15 72.3 7.6 61 26-88 32-101 (202)
181 2yvl_A TRMI protein, hypotheti 99.1 1.5E-10 5E-15 74.5 7.4 74 10-88 81-165 (248)
182 1uwv_A 23S rRNA (uracil-5-)-me 99.1 7.7E-11 2.6E-15 82.5 6.5 79 5-88 271-363 (433)
183 1ri5_A MRNA capping enzyme; me 99.1 8.1E-11 2.8E-15 77.3 6.1 67 22-89 63-141 (298)
184 3cc8_A Putative methyltransfer 99.1 2.2E-10 7.6E-15 72.4 8.0 76 8-90 21-102 (230)
185 3ldg_A Putative uncharacterize 99.1 1.1E-10 3.8E-15 80.9 7.0 83 3-88 177-307 (384)
186 2gs9_A Hypothetical protein TT 99.1 1E-10 3.6E-15 73.7 6.3 63 23-90 36-104 (211)
187 2pbf_A Protein-L-isoaspartate 99.1 1.2E-10 4.1E-15 74.3 6.4 68 21-88 78-169 (227)
188 1ej0_A FTSJ; methyltransferase 99.1 1.7E-10 5.8E-15 69.9 6.8 73 9-88 10-95 (180)
189 2fpo_A Methylase YHHF; structu 99.1 3.6E-11 1.2E-15 76.2 3.8 79 7-88 40-129 (202)
190 3tqs_A Ribosomal RNA small sub 99.1 7.4E-11 2.5E-15 77.8 5.4 69 6-79 15-89 (255)
191 3c3p_A Methyltransferase; NP_9 99.1 4.6E-11 1.6E-15 75.6 4.3 66 23-88 56-133 (210)
192 3r3h_A O-methyltransferase, SA 99.1 1E-11 3.5E-16 80.9 1.1 67 22-88 59-143 (242)
193 2hnk_A SAM-dependent O-methylt 99.1 2.2E-11 7.7E-16 78.6 2.6 56 22-77 59-123 (239)
194 4df3_A Fibrillarin-like rRNA/T 99.1 4.3E-10 1.5E-14 73.5 8.7 81 7-87 61-153 (233)
195 3p2e_A 16S rRNA methylase; met 99.1 1.1E-10 3.7E-15 75.4 5.6 55 23-77 24-89 (225)
196 1iy9_A Spermidine synthase; ro 99.1 7.9E-11 2.7E-15 78.1 5.1 66 23-88 75-155 (275)
197 2nxc_A L11 mtase, ribosomal pr 99.1 8.2E-11 2.8E-15 77.0 4.8 64 23-88 120-191 (254)
198 1xj5_A Spermidine synthase 1; 99.1 9.3E-11 3.2E-15 80.0 5.1 67 22-88 119-201 (334)
199 3frh_A 16S rRNA methylase; met 99.1 2.6E-10 8.9E-15 75.1 7.0 64 22-88 104-175 (253)
200 2pt6_A Spermidine synthase; tr 99.1 7.6E-11 2.6E-15 79.9 4.5 66 23-88 116-196 (321)
201 3dou_A Ribosomal RNA large sub 99.1 5.7E-10 1.9E-14 70.4 8.3 73 6-87 10-97 (191)
202 1r18_A Protein-L-isoaspartate( 99.1 1.3E-10 4.5E-15 74.3 5.4 80 9-89 71-171 (227)
203 2avn_A Ubiquinone/menaquinone 99.1 2.8E-10 9.4E-15 74.2 7.0 65 23-89 54-122 (260)
204 1sui_A Caffeoyl-COA O-methyltr 99.1 4.5E-11 1.5E-15 78.1 3.1 67 22-88 78-163 (247)
205 2qm3_A Predicted methyltransfe 99.1 1.8E-10 6.2E-15 79.1 5.8 65 23-88 172-248 (373)
206 3lcv_B Sisomicin-gentamicin re 99.1 9.1E-11 3.1E-15 78.2 4.1 67 22-88 131-205 (281)
207 4hc4_A Protein arginine N-meth 99.1 1.5E-10 5E-15 80.2 5.2 65 23-88 83-156 (376)
208 2avd_A Catechol-O-methyltransf 99.1 6.2E-11 2.1E-15 75.7 3.1 67 22-88 68-152 (229)
209 1qyr_A KSGA, high level kasuga 99.1 1E-10 3.6E-15 77.0 4.2 70 6-80 7-82 (252)
210 3bgv_A MRNA CAP guanine-N7 met 99.1 2.1E-10 7.2E-15 76.6 5.5 66 23-89 34-122 (313)
211 1i1n_A Protein-L-isoaspartate 99.1 6.4E-10 2.2E-14 70.9 7.4 77 11-88 66-158 (226)
212 3dmg_A Probable ribosomal RNA 99.1 5.4E-10 1.9E-14 77.3 7.6 80 6-88 217-305 (381)
213 2cmg_A Spermidine synthase; tr 99.1 4.5E-10 1.6E-14 74.2 6.8 64 23-88 72-146 (262)
214 1inl_A Spermidine synthase; be 99.0 2.6E-10 8.9E-15 76.4 5.6 66 23-88 90-170 (296)
215 1yub_A Ermam, rRNA methyltrans 99.0 9.7E-11 3.3E-15 76.2 3.3 70 6-80 15-90 (245)
216 2o07_A Spermidine synthase; st 99.0 1.9E-10 6.5E-15 77.4 4.5 67 22-88 94-175 (304)
217 3c3y_A Pfomt, O-methyltransfer 99.0 1.2E-10 4.1E-15 75.5 3.4 67 22-88 69-154 (237)
218 1mjf_A Spermidine synthase; sp 99.0 2.7E-10 9.4E-15 75.6 5.2 65 23-88 75-159 (281)
219 3bwc_A Spermidine synthase; SA 99.0 2.6E-10 8.9E-15 76.5 4.9 67 22-88 94-176 (304)
220 1uir_A Polyamine aminopropyltr 99.0 3.7E-10 1.3E-14 76.2 5.4 66 23-88 77-158 (314)
221 3bzb_A Uncharacterized protein 99.0 9.6E-10 3.3E-14 72.9 6.9 81 5-89 64-171 (281)
222 2nyu_A Putative ribosomal RNA 99.0 2.3E-09 7.9E-14 66.6 8.2 72 10-87 11-103 (196)
223 2b2c_A Spermidine synthase; be 99.0 2.3E-10 7.7E-15 77.5 3.8 66 23-88 108-188 (314)
224 2i7c_A Spermidine synthase; tr 99.0 2.8E-10 9.6E-15 75.7 4.0 66 23-88 78-158 (283)
225 3cbg_A O-methyltransferase; cy 99.0 1.2E-10 4.2E-15 75.1 2.1 66 23-88 72-155 (232)
226 2i62_A Nicotinamide N-methyltr 99.0 3.2E-10 1.1E-14 73.3 4.0 68 22-90 55-166 (265)
227 4azs_A Methyltransferase WBDD; 99.0 4.8E-10 1.6E-14 80.8 4.9 65 23-89 66-142 (569)
228 2oxt_A Nucleoside-2'-O-methylt 99.0 1.1E-09 3.9E-14 72.4 6.2 64 21-88 72-147 (265)
229 2wa2_A Non-structural protein 99.0 7.6E-10 2.6E-14 73.7 5.3 64 21-88 80-155 (276)
230 1ixk_A Methyltransferase; open 99.0 1.4E-09 4.8E-14 73.3 6.4 67 21-87 116-193 (315)
231 1vlm_A SAM-dependent methyltra 99.0 4.3E-10 1.5E-14 71.5 3.6 60 24-90 48-111 (219)
232 3k6r_A Putative transferase PH 98.9 8.5E-10 2.9E-14 73.7 5.0 66 22-88 124-199 (278)
233 3ajd_A Putative methyltransfer 98.9 8.2E-10 2.8E-14 72.9 4.3 68 21-88 81-163 (274)
234 2igt_A SAM dependent methyltra 98.9 8.5E-10 2.9E-14 75.1 4.2 63 23-87 153-231 (332)
235 2jjq_A Uncharacterized RNA met 98.9 3.8E-09 1.3E-13 74.0 7.6 63 23-88 290-360 (425)
236 2f8l_A Hypothetical protein LM 98.9 2.5E-09 8.6E-14 72.6 5.8 66 23-88 130-208 (344)
237 4e2x_A TCAB9; kijanose, tetron 98.9 1.1E-09 3.8E-14 75.6 4.1 80 5-90 92-180 (416)
238 2g72_A Phenylethanolamine N-me 98.9 6.3E-10 2.2E-14 73.4 2.7 54 9-64 58-112 (289)
239 2r6z_A UPF0341 protein in RSP 98.9 5.1E-10 1.7E-14 73.9 2.2 65 22-88 82-168 (258)
240 2yx1_A Hypothetical protein MJ 98.9 2.5E-09 8.7E-14 72.6 5.3 63 23-88 195-265 (336)
241 2aot_A HMT, histamine N-methyl 98.9 1.8E-09 6.2E-14 71.5 4.2 68 23-90 52-144 (292)
242 2a14_A Indolethylamine N-methy 98.9 6E-10 2E-14 73.0 1.6 67 22-89 54-164 (263)
243 2zfu_A Nucleomethylin, cerebra 98.8 6.5E-09 2.2E-13 65.6 6.1 64 11-90 57-124 (215)
244 3v97_A Ribosomal RNA large sub 98.8 5.7E-09 1.9E-13 77.0 6.4 83 3-88 173-310 (703)
245 3sso_A Methyltransferase; macr 98.8 4E-09 1.4E-13 73.8 5.3 74 8-88 205-295 (419)
246 2vdw_A Vaccinia virus capping 98.8 5.1E-09 1.7E-13 70.3 5.6 65 23-88 48-136 (302)
247 3opn_A Putative hemolysin; str 98.8 6.5E-10 2.2E-14 72.2 1.1 53 9-64 25-78 (232)
248 2yxl_A PH0851 protein, 450AA l 98.8 1.4E-08 4.9E-13 71.3 7.6 67 21-87 257-336 (450)
249 3bt7_A TRNA (uracil-5-)-methyl 98.8 2.7E-09 9.2E-14 73.2 3.5 66 6-77 200-272 (369)
250 2p41_A Type II methyltransfera 98.8 1.1E-08 3.9E-13 68.8 6.3 65 21-88 80-155 (305)
251 2b78_A Hypothetical protein SM 98.8 2.7E-09 9.3E-14 73.7 2.7 64 23-87 212-291 (385)
252 1sqg_A SUN protein, FMU protei 98.8 1.6E-08 5.4E-13 70.6 6.4 67 21-87 244-321 (429)
253 3o4f_A Spermidine synthase; am 98.7 5.1E-08 1.8E-12 65.6 8.2 65 23-87 83-163 (294)
254 3hp7_A Hemolysin, putative; st 98.7 2E-08 6.9E-13 67.5 5.8 77 9-88 73-158 (291)
255 3ll7_A Putative methyltransfer 98.7 7.3E-09 2.5E-13 72.5 3.7 64 23-88 93-170 (410)
256 2okc_A Type I restriction enzy 98.7 1.4E-08 4.9E-13 71.1 5.0 79 7-88 158-260 (445)
257 2oyr_A UPF0341 protein YHIQ; a 98.7 5.8E-09 2E-13 69.0 2.7 74 10-88 76-171 (258)
258 2frx_A Hypothetical protein YE 98.7 3.9E-08 1.3E-12 69.8 7.1 65 23-87 117-193 (479)
259 3giw_A Protein of unknown func 98.7 1.8E-08 6.2E-13 67.3 5.0 55 23-77 78-142 (277)
260 2as0_A Hypothetical protein PH 98.7 5.2E-09 1.8E-13 72.3 2.4 65 23-88 217-296 (396)
261 2k4m_A TR8_protein, UPF0146 pr 98.7 4E-08 1.4E-12 60.3 5.9 55 23-87 35-95 (153)
262 3m6w_A RRNA methylase; rRNA me 98.7 7.1E-09 2.4E-13 73.5 2.9 67 21-87 99-176 (464)
263 2qfm_A Spermine synthase; sper 98.7 9.2E-09 3.1E-13 71.0 3.2 65 23-88 188-274 (364)
264 3c0k_A UPF0064 protein YCCW; P 98.7 4.8E-09 1.7E-13 72.4 1.7 65 23-88 220-300 (396)
265 1wxx_A TT1595, hypothetical pr 98.7 4.6E-09 1.6E-13 72.3 1.3 63 23-87 209-285 (382)
266 2b9e_A NOL1/NOP2/SUN domain fa 98.7 4.8E-08 1.7E-12 65.9 6.2 67 21-87 100-180 (309)
267 4dmg_A Putative uncharacterize 98.6 5.3E-08 1.8E-12 67.7 6.2 64 23-88 214-287 (393)
268 3m4x_A NOL1/NOP2/SUN family pr 98.6 9.8E-09 3.4E-13 72.6 2.4 67 21-87 103-181 (456)
269 2dul_A N(2),N(2)-dimethylguano 98.6 3.9E-08 1.3E-12 68.0 3.7 65 24-88 48-138 (378)
270 3v97_A Ribosomal RNA large sub 98.6 1.2E-07 4.1E-12 70.0 6.5 65 23-88 539-616 (703)
271 1wg8_A Predicted S-adenosylmet 98.4 4.4E-07 1.5E-11 60.8 6.0 76 7-87 9-95 (285)
272 3axs_A Probable N(2),N(2)-dime 98.4 6.2E-08 2.1E-12 67.4 1.6 66 23-88 52-132 (392)
273 2xyq_A Putative 2'-O-methyl tr 98.4 5.7E-07 1.9E-11 60.3 6.2 59 21-88 61-130 (290)
274 4gqb_A Protein arginine N-meth 98.4 3.6E-07 1.2E-11 67.0 5.1 64 24-87 358-434 (637)
275 4auk_A Ribosomal RNA large sub 98.3 1.2E-06 4E-11 60.7 5.1 65 21-87 209-276 (375)
276 2ar0_A M.ecoki, type I restric 98.2 1.6E-06 5.5E-11 62.4 5.2 78 8-88 157-268 (541)
277 3tka_A Ribosomal RNA small sub 98.2 6.5E-06 2.2E-10 56.4 7.2 78 8-88 45-135 (347)
278 3khk_A Type I restriction-modi 98.1 9.2E-07 3.2E-11 63.7 2.8 77 8-88 233-336 (544)
279 3lkd_A Type I restriction-modi 98.1 2.6E-06 8.8E-11 61.4 5.0 66 23-88 221-304 (542)
280 3ua3_A Protein arginine N-meth 98.1 2.2E-06 7.5E-11 63.6 4.3 64 24-87 410-501 (745)
281 3p8z_A Mtase, non-structural p 98.1 7.2E-06 2.5E-10 54.0 5.8 77 8-87 66-150 (267)
282 3s1s_A Restriction endonucleas 98.1 5.3E-06 1.8E-10 62.5 5.5 67 22-88 320-406 (878)
283 3c6k_A Spermine synthase; sper 97.9 6.3E-06 2.2E-10 57.2 3.4 64 23-87 205-290 (381)
284 1i4w_A Mitochondrial replicati 97.9 1.5E-05 5.2E-10 54.8 5.1 69 6-77 38-116 (353)
285 2zig_A TTHA0409, putative modi 97.9 1.4E-05 4.8E-10 53.2 4.8 52 7-64 223-275 (297)
286 3gcz_A Polyprotein; flavivirus 97.9 2.4E-05 8.3E-10 52.3 5.7 44 9-55 79-122 (282)
287 3evf_A RNA-directed RNA polyme 97.8 5.2E-05 1.8E-09 50.6 6.5 67 21-87 72-146 (277)
288 2ld4_A Anamorsin; methyltransf 97.7 9.4E-06 3.2E-10 49.6 1.7 53 21-89 10-71 (176)
289 3lkz_A Non-structural protein 97.7 7.5E-05 2.6E-09 50.5 5.9 76 9-87 83-166 (321)
290 2px2_A Genome polyprotein [con 97.5 0.00012 4E-09 48.6 4.7 75 9-87 62-145 (269)
291 2qy6_A UPF0209 protein YFCK; s 97.4 7.5E-05 2.6E-09 49.1 2.9 34 23-56 60-106 (257)
292 3b5i_A S-adenosyl-L-methionine 97.4 0.002 6.9E-08 44.5 9.5 66 24-89 53-158 (374)
293 3cvo_A Methyltransferase-like 97.3 0.00077 2.6E-08 43.0 6.2 51 23-76 30-90 (202)
294 3ufb_A Type I restriction-modi 97.1 0.0007 2.4E-08 48.6 5.0 78 8-88 205-309 (530)
295 1g60_A Adenine-specific methyl 97.1 0.00088 3E-08 43.7 4.8 52 7-64 200-252 (260)
296 3eld_A Methyltransferase; flav 96.7 0.0028 9.6E-08 42.7 4.8 35 21-55 79-113 (300)
297 1zkd_A DUF185; NESG, RPR58, st 96.5 0.006 2E-07 42.4 5.6 55 6-60 63-125 (387)
298 1rjd_A PPM1P, carboxy methyl t 96.4 0.0041 1.4E-07 42.3 4.6 55 23-77 97-178 (334)
299 2py6_A Methyltransferase FKBM; 96.4 0.0078 2.7E-07 41.8 5.9 41 22-62 225-268 (409)
300 4fzv_A Putative methyltransfer 96.4 0.0042 1.4E-07 42.7 4.4 67 21-87 146-229 (359)
301 2wk1_A NOVP; transferase, O-me 96.2 0.019 6.6E-07 38.2 6.9 66 22-87 105-215 (282)
302 2efj_A 3,7-dimethylxanthine me 96.0 0.0049 1.7E-07 42.8 3.4 66 24-89 53-157 (384)
303 2oo3_A Protein involved in cat 95.7 0.0045 1.5E-07 41.4 2.0 62 24-87 92-165 (283)
304 1g55_A DNA cytosine methyltran 95.2 0.024 8.3E-07 38.4 4.2 64 25-88 3-75 (343)
305 3r24_A NSP16, 2'-O-methyl tran 94.9 0.027 9.4E-07 38.3 3.7 59 22-87 108-175 (344)
306 3g7u_A Cytosine-specific methy 94.4 0.058 2E-06 37.1 4.5 62 25-88 3-78 (376)
307 2c7p_A Modification methylase 94.3 0.041 1.4E-06 37.2 3.6 61 24-88 11-78 (327)
308 1m6e_X S-adenosyl-L-methionnin 94.1 0.0096 3.3E-07 41.0 0.2 67 23-89 51-147 (359)
309 1boo_A Protein (N-4 cytosine-s 93.4 0.15 5.2E-06 34.1 5.0 52 7-64 240-292 (323)
310 3llv_A Exopolyphosphatase-rela 93.1 0.26 8.7E-06 28.5 5.2 62 24-88 6-77 (141)
311 2uyo_A Hypothetical protein ML 92.9 0.1 3.5E-06 35.0 3.6 53 23-77 102-164 (310)
312 4f3n_A Uncharacterized ACR, CO 92.6 0.051 1.7E-06 38.3 1.8 49 7-58 124-178 (432)
313 3iht_A S-adenosyl-L-methionine 92.2 0.63 2.2E-05 28.8 6.1 43 9-55 30-72 (174)
314 2g1u_A Hypothetical protein TM 92.0 1.1 3.8E-05 26.3 7.7 65 23-88 18-91 (155)
315 1eg2_A Modification methylase 90.8 0.4 1.4E-05 32.2 4.7 52 7-64 230-285 (319)
316 3qv2_A 5-cytosine DNA methyltr 90.5 0.083 2.8E-06 35.7 1.1 64 24-88 10-83 (327)
317 2dph_A Formaldehyde dismutase; 90.3 0.72 2.5E-05 31.4 5.7 45 21-65 183-229 (398)
318 3l4b_C TRKA K+ channel protien 89.3 0.47 1.6E-05 29.5 3.9 60 27-88 3-72 (218)
319 4h0n_A DNMT2; SAH binding, tra 89.3 0.17 5.7E-06 34.3 1.8 64 25-88 4-76 (333)
320 3vrd_B FCCB subunit, flavocyto 89.0 0.64 2.2E-05 31.3 4.6 32 24-55 2-35 (401)
321 2qrv_A DNA (cytosine-5)-methyl 88.7 0.49 1.7E-05 31.5 3.8 67 22-88 14-90 (295)
322 3b1f_A Putative prephenate deh 88.1 1.4 4.9E-05 28.4 5.7 64 25-88 7-73 (290)
323 3ubt_Y Modification methylase 88.0 0.49 1.7E-05 31.3 3.5 61 26-88 2-68 (331)
324 3slg_A PBGP3 protein; structur 87.9 0.95 3.2E-05 30.0 4.9 63 24-87 24-97 (372)
325 3iei_A Leucine carboxyl methyl 87.5 2.4 8.2E-05 28.7 6.6 55 23-77 90-174 (334)
326 2aef_A Calcium-gated potassium 87.4 2.5 8.5E-05 26.4 6.4 61 23-88 8-78 (234)
327 3ggo_A Prephenate dehydrogenas 87.3 1.3 4.4E-05 29.5 5.2 64 25-88 34-101 (314)
328 1f8f_A Benzyl alcohol dehydrog 87.1 1.4 4.7E-05 29.6 5.3 44 21-64 188-233 (371)
329 3dfz_A SIRC, precorrin-2 dehyd 86.9 1.1 3.8E-05 28.7 4.5 64 23-88 30-98 (223)
330 3ic5_A Putative saccharopine d 86.1 2.7 9.3E-05 22.7 6.6 61 24-87 5-75 (118)
331 3two_A Mannitol dehydrogenase; 85.9 2.5 8.5E-05 28.1 6.0 43 21-64 174-218 (348)
332 2bll_A Protein YFBG; decarboxy 85.7 1.3 4.4E-05 28.9 4.5 51 26-77 2-56 (345)
333 3dqp_A Oxidoreductase YLBE; al 85.7 1.3 4.3E-05 27.2 4.2 58 26-87 2-69 (219)
334 1kol_A Formaldehyde dehydrogen 85.6 2.8 9.7E-05 28.3 6.3 44 21-64 183-228 (398)
335 3fwz_A Inner membrane protein 85.3 1.8 6.1E-05 25.0 4.6 62 24-87 7-77 (140)
336 3h2s_A Putative NADH-flavin re 85.1 1.9 6.4E-05 26.3 4.8 59 27-87 3-68 (224)
337 2hmt_A YUAA protein; RCK, KTN, 85.0 3.6 0.00012 23.1 6.0 61 25-88 7-77 (144)
338 1pl8_A Human sorbitol dehydrog 84.9 2.9 9.8E-05 27.9 6.0 44 21-64 169-214 (356)
339 3s2e_A Zinc-containing alcohol 84.8 3.6 0.00012 27.1 6.4 43 21-64 164-208 (340)
340 4g65_A TRK system potassium up 84.4 1.1 3.8E-05 31.4 3.9 60 26-87 5-74 (461)
341 1lss_A TRK system potassium up 84.0 2.9 9.9E-05 23.4 5.1 62 25-88 5-76 (140)
342 3jv7_A ADH-A; dehydrogenase, n 83.2 3.2 0.00011 27.5 5.6 44 21-64 169-214 (345)
343 1uuf_A YAHK, zinc-type alcohol 82.5 3.4 0.00012 27.8 5.6 43 21-64 192-236 (369)
344 2h6e_A ADH-4, D-arabinose 1-de 82.0 2.6 9E-05 27.9 4.8 42 23-64 170-214 (344)
345 3ius_A Uncharacterized conserv 81.5 3.8 0.00013 25.9 5.3 60 25-87 6-69 (286)
346 3l9w_A Glutathione-regulated p 81.5 3.5 0.00012 28.6 5.4 62 25-88 5-75 (413)
347 3hyw_A Sulfide-quinone reducta 81.5 2.3 7.9E-05 29.1 4.5 31 25-55 3-35 (430)
348 1pqw_A Polyketide synthase; ro 80.8 2.7 9.1E-05 25.4 4.3 43 21-64 36-81 (198)
349 3ew7_A LMO0794 protein; Q8Y8U8 80.5 2.2 7.6E-05 25.8 3.8 59 26-87 2-67 (221)
350 1jvb_A NAD(H)-dependent alcoho 80.4 4.5 0.00015 26.8 5.5 43 21-63 168-213 (347)
351 3fpz_A Thiazole biosynthetic e 79.6 2.2 7.4E-05 28.0 3.8 31 25-55 66-98 (326)
352 3ged_A Short-chain dehydrogena 79.0 10 0.00036 24.3 6.9 52 25-77 3-58 (247)
353 3e8x_A Putative NAD-dependent 78.4 3.3 0.00011 25.5 4.2 62 24-87 21-90 (236)
354 3fpc_A NADP-dependent alcohol 78.4 3.6 0.00012 27.3 4.6 44 21-64 164-209 (352)
355 3uko_A Alcohol dehydrogenase c 78.0 3 0.0001 28.0 4.2 45 21-65 191-237 (378)
356 2b69_A UDP-glucuronate decarbo 78.0 7.1 0.00024 25.4 5.9 63 24-87 27-97 (343)
357 1e3j_A NADP(H)-dependent ketos 77.6 6.9 0.00024 25.9 5.8 43 21-64 166-210 (352)
358 1cdo_A Alcohol dehydrogenase; 77.4 5.2 0.00018 26.8 5.2 44 21-64 190-235 (374)
359 3mag_A VP39; methylated adenin 76.8 2.2 7.5E-05 28.8 3.1 53 23-77 60-117 (307)
360 2jhf_A Alcohol dehydrogenase E 76.4 5.8 0.0002 26.5 5.2 44 21-64 189-234 (374)
361 4g65_A TRK system potassium up 75.9 7.4 0.00025 27.3 5.7 76 9-87 221-306 (461)
362 1e3i_A Alcohol dehydrogenase, 75.5 6.3 0.00022 26.4 5.2 44 21-64 193-238 (376)
363 1pjq_A CYSG, siroheme synthase 75.4 8.1 0.00028 27.0 5.8 63 24-88 12-79 (457)
364 3kkj_A Amine oxidase, flavin-c 75.2 2.9 9.8E-05 25.0 3.2 30 26-55 4-33 (336)
365 3c85_A Putative glutathione-re 75.2 7.4 0.00025 23.1 5.0 62 25-87 40-111 (183)
366 2g5c_A Prephenate dehydrogenas 75.0 5.7 0.0002 25.4 4.7 63 26-88 3-69 (281)
367 3e48_A Putative nucleoside-dip 74.9 2.1 7.2E-05 27.2 2.6 59 27-87 3-71 (289)
368 4eez_A Alcohol dehydrogenase 1 74.7 10 0.00034 24.9 6.0 44 21-64 161-206 (348)
369 1p0f_A NADP-dependent alcohol 74.6 4.9 0.00017 26.9 4.5 44 21-64 189-234 (373)
370 1id1_A Putative potassium chan 74.5 8.5 0.00029 22.2 5.1 62 25-88 4-78 (153)
371 4ej6_A Putative zinc-binding d 74.3 9.1 0.00031 25.7 5.7 44 21-64 180-225 (370)
372 2c0c_A Zinc binding alcohol de 73.3 8.5 0.00029 25.7 5.4 43 21-64 161-206 (362)
373 2fzw_A Alcohol dehydrogenase c 73.0 5.7 0.00019 26.5 4.5 44 21-64 188-233 (373)
374 1h2b_A Alcohol dehydrogenase; 72.9 9.7 0.00033 25.3 5.6 44 21-64 184-229 (359)
375 4g6h_A Rotenone-insensitive NA 72.5 5.2 0.00018 28.2 4.3 32 24-55 42-73 (502)
376 3ruf_A WBGU; rossmann fold, UD 72.4 6.5 0.00022 25.6 4.6 63 24-87 25-106 (351)
377 3m6i_A L-arabinitol 4-dehydrog 72.4 9 0.00031 25.4 5.3 43 21-63 177-221 (363)
378 3dhn_A NAD-dependent epimerase 72.2 3.5 0.00012 25.1 3.1 60 25-87 5-73 (227)
379 2dq4_A L-threonine 3-dehydroge 72.1 16 0.00053 24.1 6.4 42 23-65 164-208 (343)
380 3uog_A Alcohol dehydrogenase; 72.0 10 0.00034 25.3 5.5 43 21-64 187-231 (363)
381 3r6d_A NAD-dependent epimerase 71.8 4.8 0.00016 24.5 3.6 62 25-87 6-79 (221)
382 3me5_A Cytosine-specific methy 71.2 1.8 6.1E-05 30.9 1.7 51 25-77 89-145 (482)
383 2zwa_A Leucine carboxyl methyl 70.8 7.2 0.00025 28.6 4.9 38 23-60 107-152 (695)
384 2vz8_A Fatty acid synthase; tr 70.8 1.7 5.8E-05 36.7 1.7 67 24-90 1241-1320(2512)
385 4hb9_A Similarities with proba 70.7 4.8 0.00016 26.6 3.7 30 26-55 3-32 (412)
386 2vvp_A Ribose-5-phosphate isom 70.5 3.1 0.00011 25.5 2.5 49 27-75 64-114 (162)
387 3c4a_A Probable tryptophan hyd 70.3 6.9 0.00024 26.1 4.4 30 26-55 2-33 (381)
388 3kzv_A Uncharacterized oxidore 70.1 10 0.00035 23.8 5.0 53 25-77 3-61 (254)
389 4eqs_A Coenzyme A disulfide re 69.8 7.1 0.00024 26.8 4.5 30 26-55 2-33 (437)
390 4dvj_A Putative zinc-dependent 68.6 6.2 0.00021 26.4 3.9 42 23-64 171-215 (363)
391 1ej6_A Lambda2; icosahedral, n 68.6 1.7 5.8E-05 34.3 1.2 62 23-87 821-888 (1289)
392 1rjw_A ADH-HT, alcohol dehydro 68.5 16 0.00053 24.1 5.8 43 21-64 162-206 (339)
393 3sxp_A ADP-L-glycero-D-mannohe 68.3 4.1 0.00014 26.9 2.9 62 24-86 10-95 (362)
394 1o1x_A Ribose-5-phosphate isom 68.1 3 0.0001 25.4 2.0 49 27-75 72-122 (155)
395 2hcy_A Alcohol dehydrogenase 1 68.1 12 0.00042 24.6 5.2 43 21-64 167-212 (347)
396 1piw_A Hypothetical zinc-type 68.0 7.7 0.00026 25.8 4.3 42 21-63 177-220 (360)
397 3he8_A Ribose-5-phosphate isom 67.9 3.6 0.00012 24.8 2.3 47 29-75 62-110 (149)
398 3mdq_A Exopolyphosphatase; str 67.9 4.9 0.00017 26.7 3.2 24 10-35 120-143 (315)
399 3o38_A Short chain dehydrogena 67.8 14 0.00049 23.1 5.3 52 24-77 22-84 (266)
400 3s5p_A Ribose 5-phosphate isom 67.7 3.9 0.00013 25.2 2.5 46 29-74 83-130 (166)
401 4b7c_A Probable oxidoreductase 67.6 12 0.00042 24.4 5.2 41 21-62 147-190 (336)
402 2vns_A Metalloreductase steap3 67.5 10 0.00036 23.4 4.5 59 25-88 29-90 (215)
403 1m6i_A Programmed cell death p 67.4 9 0.00031 26.8 4.6 32 24-55 11-44 (493)
404 3vc3_A Beta-cyanoalnine syntha 67.2 19 0.00064 24.2 6.0 46 5-55 178-227 (344)
405 1kyq_A Met8P, siroheme biosynt 67.2 13 0.00045 24.4 5.1 33 23-55 12-44 (274)
406 3pvc_A TRNA 5-methylaminomethy 67.1 2.7 9.4E-05 30.7 2.0 31 26-56 61-104 (689)
407 1hdo_A Biliverdin IX beta redu 67.1 7.5 0.00026 23.0 3.8 61 25-87 4-73 (206)
408 3n74_A 3-ketoacyl-(acyl-carrie 67.0 19 0.00064 22.5 5.8 53 24-77 9-66 (261)
409 1y1p_A ARII, aldehyde reductas 67.0 7.6 0.00026 25.0 4.0 64 23-87 10-89 (342)
410 3ip1_A Alcohol dehydrogenase, 67.0 11 0.00038 25.5 4.9 44 21-64 211-256 (404)
411 3ryc_B Tubulin beta chain; alp 67.0 6.4 0.00022 27.8 3.8 33 21-53 130-167 (445)
412 1vj0_A Alcohol dehydrogenase, 66.9 9.7 0.00033 25.6 4.6 43 22-64 194-238 (380)
413 2i6t_A Ubiquitin-conjugating e 66.9 11 0.00039 24.9 4.8 64 23-88 13-84 (303)
414 2x4g_A Nucleoside-diphosphate- 66.4 5.9 0.0002 25.6 3.4 60 26-87 15-83 (342)
415 4fn4_A Short chain dehydrogena 66.4 19 0.00066 23.1 5.8 53 24-77 7-67 (254)
416 4eso_A Putative oxidoreductase 66.2 14 0.00049 23.2 5.1 53 24-77 8-65 (255)
417 3guy_A Short-chain dehydrogena 66.1 6.1 0.00021 24.3 3.3 51 26-77 3-58 (230)
418 3ryc_A Tubulin alpha chain; al 66.1 8.1 0.00028 27.4 4.1 42 11-54 124-170 (451)
419 3h7a_A Short chain dehydrogena 65.8 12 0.00041 23.5 4.7 53 24-77 7-67 (252)
420 1v3u_A Leukotriene B4 12- hydr 65.6 21 0.00072 23.3 6.0 42 21-63 143-187 (333)
421 2xdo_A TETX2 protein; tetracyc 65.3 14 0.00048 24.7 5.1 32 24-55 26-57 (398)
422 1up7_A 6-phospho-beta-glucosid 65.2 6.2 0.00021 27.5 3.4 63 25-88 3-80 (417)
423 3o26_A Salutaridine reductase; 65.2 21 0.00072 22.6 5.8 54 24-78 12-74 (311)
424 1z7e_A Protein aRNA; rossmann 65.0 6.7 0.00023 28.4 3.7 52 25-77 316-371 (660)
425 1u6z_A Exopolyphosphatase; alp 64.9 5.4 0.00018 28.4 3.1 27 8-37 125-151 (513)
426 1ges_A Glutathione reductase; 64.8 9.9 0.00034 26.1 4.4 31 25-55 5-35 (450)
427 3ph3_A Ribose-5-phosphate isom 64.5 3.9 0.00013 25.3 2.0 48 28-75 81-130 (169)
428 3ucx_A Short chain dehydrogena 64.5 23 0.00079 22.2 5.9 52 24-77 11-71 (264)
429 2e4g_A Tryptophan halogenase; 64.5 9.5 0.00032 27.0 4.3 32 24-55 25-59 (550)
430 3lzw_A Ferredoxin--NADP reduct 64.3 7.1 0.00024 24.9 3.4 31 25-55 8-38 (332)
431 3gaf_A 7-alpha-hydroxysteroid 64.2 23 0.00079 22.2 5.8 53 24-77 12-72 (256)
432 2cfc_A 2-(R)-hydroxypropyl-COM 63.9 19 0.00064 22.2 5.3 52 25-77 3-63 (250)
433 4f6c_A AUSA reductase domain p 63.6 4.8 0.00016 27.3 2.6 62 25-87 70-156 (427)
434 2pyx_A Tryptophan halogenase; 63.6 8.2 0.00028 27.1 3.8 32 24-55 7-50 (526)
435 4gcm_A TRXR, thioredoxin reduc 63.6 7.7 0.00026 24.9 3.5 30 26-55 8-37 (312)
436 3k7p_A Ribose 5-phosphate isom 63.2 5.3 0.00018 24.9 2.5 47 29-75 86-134 (179)
437 2eih_A Alcohol dehydrogenase; 63.2 15 0.00052 24.1 4.9 42 21-63 164-208 (343)
438 3tjr_A Short chain dehydrogena 63.2 24 0.00081 22.8 5.8 53 24-77 31-91 (301)
439 2jl1_A Triphenylmethane reduct 63.1 5 0.00017 25.3 2.5 59 27-87 3-72 (287)
440 2d8a_A PH0655, probable L-thre 63.0 17 0.00058 23.9 5.2 42 23-64 167-210 (348)
441 2vou_A 2,6-dihydroxypyridine h 62.8 11 0.00037 25.2 4.2 32 24-55 5-36 (397)
442 3zv4_A CIS-2,3-dihydrobiphenyl 62.2 23 0.00079 22.6 5.6 53 24-77 5-62 (281)
443 3ono_A Ribose/galactose isomer 62.1 3.6 0.00012 26.3 1.6 47 27-73 69-117 (214)
444 3ps9_A TRNA 5-methylaminomethy 62.1 5.9 0.0002 28.8 2.9 31 26-56 69-112 (676)
445 1j0a_A 1-aminocyclopropane-1-c 62.1 28 0.00097 22.8 6.1 46 7-55 169-216 (325)
446 2aqj_A Tryptophan halogenase, 62.1 9.3 0.00032 26.9 3.9 32 24-55 5-39 (538)
447 1fmc_A 7 alpha-hydroxysteroid 62.0 12 0.0004 23.2 4.0 52 25-77 12-71 (255)
448 2j3h_A NADP-dependent oxidored 62.0 17 0.00057 23.8 5.0 42 21-63 153-197 (345)
449 3c5y_A Ribose/galactose isomer 62.0 3.9 0.00013 26.5 1.8 47 27-73 86-134 (231)
450 3f8d_A Thioredoxin reductase ( 61.9 9.6 0.00033 24.2 3.7 31 25-55 16-46 (323)
451 2ppw_A Conserved domain protei 61.8 3.2 0.00011 26.6 1.3 47 27-73 70-118 (216)
452 3ek2_A Enoyl-(acyl-carrier-pro 61.8 11 0.00037 23.6 3.9 55 23-77 13-75 (271)
453 3qvo_A NMRA family protein; st 61.8 10 0.00036 23.3 3.8 61 25-87 24-94 (236)
454 1lnq_A MTHK channels, potassiu 61.5 9.9 0.00034 25.0 3.8 59 24-87 115-183 (336)
455 2ag5_A DHRS6, dehydrogenase/re 61.5 26 0.00089 21.7 6.1 53 24-77 6-61 (246)
456 2gn4_A FLAA1 protein, UDP-GLCN 61.5 11 0.00039 24.8 4.1 63 24-87 21-97 (344)
457 3vyw_A MNMC2; tRNA wobble urid 61.4 15 0.00053 24.6 4.7 32 23-54 96-133 (308)
458 3rp8_A Flavoprotein monooxygen 61.3 12 0.0004 25.0 4.2 32 24-55 23-54 (407)
459 3gms_A Putative NADPH:quinone 61.1 10 0.00035 25.0 3.8 42 21-63 142-186 (340)
460 3h8l_A NADH oxidase; membrane 60.9 8.7 0.0003 25.8 3.5 31 25-55 2-35 (409)
461 3nix_A Flavoprotein/dehydrogen 60.9 12 0.0004 25.0 4.1 31 25-55 6-36 (421)
462 3ppi_A 3-hydroxyacyl-COA dehyd 60.8 23 0.00079 22.4 5.4 52 25-77 31-87 (281)
463 3cb2_A Gamma-1-tubulin, tubuli 60.7 14 0.00049 26.2 4.6 34 21-54 132-170 (475)
464 2hqm_A GR, grase, glutathione 60.6 9.4 0.00032 26.5 3.7 31 25-55 12-42 (479)
465 4gx0_A TRKA domain protein; me 60.5 10 0.00034 26.9 3.9 62 24-87 127-198 (565)
466 3ic9_A Dihydrolipoamide dehydr 60.4 13 0.00046 25.8 4.4 30 26-55 10-39 (492)
467 4hkt_A Inositol 2-dehydrogenas 60.2 6.7 0.00023 25.7 2.8 61 26-88 5-70 (331)
468 3l6e_A Oxidoreductase, short-c 60.2 8.8 0.0003 23.9 3.2 52 25-77 4-60 (235)
469 2v6g_A Progesterone 5-beta-red 60.2 8.2 0.00028 25.2 3.2 49 26-77 3-59 (364)
470 1zk7_A HGII, reductase, mercur 60.1 14 0.00048 25.4 4.5 32 24-55 4-35 (467)
471 3gpi_A NAD-dependent epimerase 60.1 25 0.00087 22.1 5.5 56 25-87 4-69 (286)
472 2zbw_A Thioredoxin reductase; 60.0 11 0.00036 24.3 3.7 31 25-55 6-36 (335)
473 4fk1_A Putative thioredoxin re 60.0 9.7 0.00033 24.4 3.5 30 26-55 8-37 (304)
474 3sx6_A Sulfide-quinone reducta 59.9 11 0.00036 25.8 3.8 32 24-55 4-38 (437)
475 3ab1_A Ferredoxin--NADP reduct 59.8 9.2 0.00032 25.0 3.4 31 25-55 15-45 (360)
476 3h28_A Sulfide-quinone reducta 59.8 11 0.00039 25.5 3.9 31 25-55 3-35 (430)
477 1cyd_A Carbonyl reductase; sho 59.5 12 0.00043 22.9 3.8 53 24-77 7-63 (244)
478 3fbs_A Oxidoreductase; structu 59.5 11 0.00039 23.5 3.7 31 25-55 3-33 (297)
479 2h7i_A Enoyl-[acyl-carrier-pro 59.5 19 0.00067 22.6 4.8 54 24-77 7-67 (269)
480 3sgw_A Ribose 5-phosphate isom 59.5 6.7 0.00023 24.5 2.5 47 29-75 94-142 (184)
481 3nyw_A Putative oxidoreductase 59.4 24 0.00082 22.0 5.2 52 24-77 7-70 (250)
482 1kew_A RMLB;, DTDP-D-glucose 4 59.3 15 0.00052 23.9 4.4 50 27-77 3-61 (361)
483 2r9z_A Glutathione amide reduc 59.3 10 0.00035 26.1 3.7 31 25-55 5-35 (463)
484 3d4o_A Dipicolinate synthase s 58.9 29 0.001 22.4 5.7 64 23-88 154-220 (293)
485 1wly_A CAAR, 2-haloacrylate re 58.8 27 0.00091 22.8 5.5 42 21-63 143-187 (333)
486 4d9b_A D-cysteine desulfhydras 58.7 30 0.001 23.0 5.8 47 7-55 185-234 (342)
487 2vvr_A Ribose-5-phosphate isom 58.5 9.2 0.00032 23.0 2.9 48 27-74 61-110 (149)
488 3jyn_A Quinone oxidoreductase; 58.5 18 0.0006 23.6 4.6 43 21-64 138-183 (325)
489 2rir_A Dipicolinate synthase, 58.4 15 0.00053 23.8 4.3 64 23-88 156-222 (300)
490 3e1t_A Halogenase; flavoprotei 58.3 13 0.00045 26.0 4.1 31 25-55 8-38 (512)
491 2pnf_A 3-oxoacyl-[acyl-carrier 58.2 15 0.00052 22.5 4.1 53 24-77 7-68 (248)
492 4a2c_A Galactitol-1-phosphate 58.2 31 0.0011 22.5 5.7 44 21-64 158-203 (346)
493 4dna_A Probable glutathione re 58.2 15 0.00052 25.2 4.4 31 25-55 6-36 (463)
494 3rd5_A Mypaa.01249.C; ssgcid, 58.1 27 0.00091 22.3 5.4 53 24-77 16-73 (291)
495 3iwa_A FAD-dependent pyridine 58.0 18 0.00061 24.9 4.7 31 25-55 4-36 (472)
496 1zk4_A R-specific alcohol dehy 57.9 11 0.00036 23.4 3.3 53 24-77 6-65 (251)
497 3qwb_A Probable quinone oxidor 57.9 21 0.00072 23.3 4.9 43 21-64 146-191 (334)
498 3oc4_A Oxidoreductase, pyridin 57.9 15 0.00053 25.1 4.4 31 25-55 3-35 (452)
499 4f6l_B AUSA reductase domain p 57.8 13 0.00044 25.9 4.0 62 25-87 151-237 (508)
500 1xea_A Oxidoreductase, GFO/IDH 57.6 4.4 0.00015 26.6 1.5 62 26-88 4-70 (323)
No 1
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.82 E-value=3.2e-20 Score=126.96 Aligned_cols=87 Identities=25% Similarity=0.464 Sum_probs=76.7
Q ss_pred CCcchhhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCC------CCCeeEEEec
Q 034578 1 MACTTKITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPT------HEGVSHVGGD 74 (90)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~------~~rv~~~~~d 74 (90)
|++.+...++.+++.++ +++..+|||||||+|.++..+++++|+++++++|+|++++.+++ .+|++++.+|
T Consensus 160 M~~~~~~~~~~~~~~~~---~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD 236 (353)
T 4a6d_A 160 LQEVWSVNGRSVLTAFD---LSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGD 236 (353)
T ss_dssp HHTTHHHHHHHHHHSSC---GGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHHHHHHSCC--CCSEEEEESC
T ss_pred HHHHHHHHHHHHHHhcC---cccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHHHHHhhhhcccCceeeecCc
Confidence 44566677888999998 67788999999999999999999999999999999999988764 4899999999
Q ss_pred CCC-CCCcccEEEeecC
Q 034578 75 MFD-AIPNADAVFMKVA 90 (90)
Q Consensus 75 ~~~-~~p~~D~i~l~~v 90 (90)
||+ +.|++|+|++++|
T Consensus 237 ~~~~~~~~~D~~~~~~v 253 (353)
T 4a6d_A 237 FFKDPLPEADLYILARV 253 (353)
T ss_dssp TTTSCCCCCSEEEEESS
T ss_pred cccCCCCCceEEEeeee
Confidence 998 4667999999986
No 2
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.78 E-value=1.2e-18 Score=119.63 Aligned_cols=87 Identities=46% Similarity=0.852 Sum_probs=76.9
Q ss_pred CcchhhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCCCCCeeEEEecCCCCCCc
Q 034578 2 ACTTKITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPTHEGVSHVGGDMFDAIPN 81 (90)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~~~rv~~~~~d~~~~~p~ 81 (90)
+..++...+.+++.++. +++..+|||||||+|.++..+++++|+++++++|+|.+++.+++.+|++++.+|+++++|.
T Consensus 182 ~~~~~~~~~~~~~~~~~--~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~D~~~~~p~ 259 (364)
T 3p9c_A 182 KNHSIIITKKLLELYHG--FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQFPGVTHVGGDMFKEVPS 259 (364)
T ss_dssp HHHHHHHHHHHHHHCCT--TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTTCCCC
T ss_pred HHhhHHHHHHHHHhccc--ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecCHHHHHhhhhcCCeEEEeCCcCCCCCC
Confidence 34455567778888873 6678899999999999999999999999999999999999999889999999999998777
Q ss_pred ccEEEeecC
Q 034578 82 ADAVFMKVA 90 (90)
Q Consensus 82 ~D~i~l~~v 90 (90)
.|+|++++|
T Consensus 260 ~D~v~~~~v 268 (364)
T 3p9c_A 260 GDTILMKWI 268 (364)
T ss_dssp CSEEEEESC
T ss_pred CCEEEehHH
Confidence 899999875
No 3
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.78 E-value=1.2e-18 Score=119.58 Aligned_cols=87 Identities=51% Similarity=0.918 Sum_probs=76.8
Q ss_pred CcchhhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCCCCCeeEEEecCCCCCCc
Q 034578 2 ACTTKITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPTHEGVSHVGGDMFDAIPN 81 (90)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~~~rv~~~~~d~~~~~p~ 81 (90)
+..+....+.+++.++. +.+..+|||||||+|.++..+++++|+++++++|+|.+++.+++.+|++++.+|+++++|.
T Consensus 184 ~~~~~~~~~~~~~~~~~--~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~p~ 261 (368)
T 3reo_A 184 SSNSTITMKKILEMYNG--FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPAFSGVEHLGGDMFDGVPK 261 (368)
T ss_dssp HHHHHHHHHHHHTTCCT--TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTTCCCC
T ss_pred HhhhhhHHHHHHHhccc--ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEehHHHHHhhhhcCCCEEEecCCCCCCCC
Confidence 34455567778888873 6677899999999999999999999999999999999999999889999999999998887
Q ss_pred ccEEEeecC
Q 034578 82 ADAVFMKVA 90 (90)
Q Consensus 82 ~D~i~l~~v 90 (90)
.|+|++++|
T Consensus 262 ~D~v~~~~v 270 (368)
T 3reo_A 262 GDAIFIKWI 270 (368)
T ss_dssp CSEEEEESC
T ss_pred CCEEEEech
Confidence 899999875
No 4
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.73 E-value=2.6e-17 Score=112.80 Aligned_cols=86 Identities=47% Similarity=0.834 Sum_probs=75.2
Q ss_pred cchhhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCCCCCeeEEEecCCCCCCcc
Q 034578 3 CTTKITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPTHEGVSHVGGDMFDAIPNA 82 (90)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~~~rv~~~~~d~~~~~p~~ 82 (90)
..+...++.+++.++. +.+..+|||||||+|.++..+++++|+++++++|+|.+++.+++.++++++.+|+++++|.+
T Consensus 191 ~~~~~~~~~l~~~~~~--~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~~~~ 268 (372)
T 1fp1_D 191 DVCATEMKRMLEIYTG--FEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDMFASVPQG 268 (372)
T ss_dssp HHHHHHHHHHHHHCCT--TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTTCCCCE
T ss_pred hhhHHHHHHHHHHhhc--cCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeChHHHHHhhhhcCCCEEEeCCcccCCCCC
Confidence 3444556778888862 66778999999999999999999999999999999999999998888999999999977779
Q ss_pred cEEEeecC
Q 034578 83 DAVFMKVA 90 (90)
Q Consensus 83 D~i~l~~v 90 (90)
|+|+++++
T Consensus 269 D~v~~~~~ 276 (372)
T 1fp1_D 269 DAMILKAV 276 (372)
T ss_dssp EEEEEESS
T ss_pred CEEEEecc
Confidence 99999875
No 5
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.73 E-value=1.7e-17 Score=112.97 Aligned_cols=85 Identities=40% Similarity=0.673 Sum_probs=71.6
Q ss_pred chhhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCCCCCeeEEEecCCCCCCccc
Q 034578 4 TTKITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPTHEGVSHVGGDMFDAIPNAD 83 (90)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~~~rv~~~~~d~~~~~p~~D 83 (90)
.+....+. ++.+++ .+.+..+|||||||+|.++..+++++|+.+++++|+|.+++.+++.++++++.+|+++++|.+|
T Consensus 171 ~~~~~~~~-~~~~~~-~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~p~~D 248 (352)
T 1fp2_A 171 DSKLINLA-LRDCDF-VFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNAD 248 (352)
T ss_dssp THHHHHHH-HHTCHH-HHTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCBTTEEEEECCTTTCCCCCS
T ss_pred cchhhhhH-HHhccc-ccccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeCHHHHhhcccCCCcEEEeccccCCCCCcc
Confidence 33444455 666621 1567789999999999999999999999999999999999999887789999999998878899
Q ss_pred EEEeecC
Q 034578 84 AVFMKVA 90 (90)
Q Consensus 84 ~i~l~~v 90 (90)
+|+++++
T Consensus 249 ~v~~~~~ 255 (352)
T 1fp2_A 249 AVLLKYI 255 (352)
T ss_dssp EEEEESC
T ss_pred EEEeehh
Confidence 9999875
No 6
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.71 E-value=2.2e-17 Score=112.58 Aligned_cols=79 Identities=42% Similarity=0.688 Sum_probs=69.4
Q ss_pred HHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCCCCCeeEEEecCCCCCCcccEEEeecC
Q 034578 11 AFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPTHEGVSHVGGDMFDAIPNADAVFMKVA 90 (90)
Q Consensus 11 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~~~rv~~~~~d~~~~~p~~D~i~l~~v 90 (90)
.+++.+++ .+.+..+|||||||+|.++..+++++|+++++++|+|.+++.+++.++++++.+|+++++|.+|+|+++++
T Consensus 182 ~~~~~~~~-~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~~~~D~v~~~~v 260 (358)
T 1zg3_A 182 LVLQENKR-VFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMFKSIPSADAVLLKWV 260 (358)
T ss_dssp HHHHHTHH-HHHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEECHHHHSSCCCCSSEEEEECCTTTCCCCCSEEEEESC
T ss_pred HHHHhcch-hccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEeccHHHHhhcccCCCcEEEeCccCCCCCCceEEEEccc
Confidence 67777721 15567899999999999999999999999999999999999998877899999999997778999999875
No 7
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.71 E-value=3e-17 Score=112.55 Aligned_cols=84 Identities=25% Similarity=0.543 Sum_probs=73.6
Q ss_pred chhhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCC-------CCCeeEEEecCC
Q 034578 4 TTKITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPT-------HEGVSHVGGDMF 76 (90)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~-------~~rv~~~~~d~~ 76 (90)
.+...++.+++.++ +.+..+|||||||+|.++..+++++|+++++++|+|.+++.+++ .+|++++.+|++
T Consensus 186 ~~~~~~~~l~~~~~---~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~l~~~v~~~~~d~~ 262 (369)
T 3gwz_A 186 VSLTEAGQVAAAYD---FSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLERPPVAEEARELLTGRGLADRCEILPGDFF 262 (369)
T ss_dssp HHHHHHHHHHHHSC---CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred HHhhhHHHHHHhCC---CccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcCHHHHHHHHHhhhhcCcCCceEEeccCCC
Confidence 34555778888888 67789999999999999999999999999999999999888875 378999999999
Q ss_pred CCCC-cccEEEeecC
Q 034578 77 DAIP-NADAVFMKVA 90 (90)
Q Consensus 77 ~~~p-~~D~i~l~~v 90 (90)
+++| .||+|++++|
T Consensus 263 ~~~p~~~D~v~~~~v 277 (369)
T 3gwz_A 263 ETIPDGADVYLIKHV 277 (369)
T ss_dssp TCCCSSCSEEEEESC
T ss_pred CCCCCCceEEEhhhh
Confidence 8888 4999999875
No 8
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.71 E-value=5.3e-17 Score=110.42 Aligned_cols=85 Identities=24% Similarity=0.394 Sum_probs=72.0
Q ss_pred cchhhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCC-----CCCeeEEEecCCC
Q 034578 3 CTTKITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPT-----HEGVSHVGGDMFD 77 (90)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~-----~~rv~~~~~d~~~ 77 (90)
..+....+.+++.++ +.+..+|||||||+|.++..+++++|+++++++|+|.++..++. .+|++++.+|+++
T Consensus 167 ~~~~~~~~~~~~~~~---~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~~~ 243 (348)
T 3lst_A 167 TVSAAEHLILARAGD---FPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFLR 243 (348)
T ss_dssp HHHHTTHHHHHHHSC---CCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHTTCCCCCGGGTTSEEEEECCTTT
T ss_pred HhhhhhHHHHHHhCC---ccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhhcccccccCCCCCeEEEecCCCC
Confidence 345556778888888 67788999999999999999999999999999999887773332 3689999999998
Q ss_pred CCCcccEEEeecC
Q 034578 78 AIPNADAVFMKVA 90 (90)
Q Consensus 78 ~~p~~D~i~l~~v 90 (90)
++|.||+|+++++
T Consensus 244 ~~p~~D~v~~~~v 256 (348)
T 3lst_A 244 EVPHADVHVLKRI 256 (348)
T ss_dssp CCCCCSEEEEESC
T ss_pred CCCCCcEEEEehh
Confidence 7778999999875
No 9
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.70 E-value=1.6e-17 Score=112.11 Aligned_cols=81 Identities=25% Similarity=0.499 Sum_probs=69.5
Q ss_pred hhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCC-------CCCeeEEEecCCCCC
Q 034578 7 ITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPT-------HEGVSHVGGDMFDAI 79 (90)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~-------~~rv~~~~~d~~~~~ 79 (90)
...+.+++.++ +.+..+|||||||+|.++..+++++|+.+++++|+|.+++.+++ .+|++++.+|+++++
T Consensus 156 ~~~~~~~~~~~---~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 232 (332)
T 3i53_A 156 LDYTGIAAKYD---WAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFFDPL 232 (332)
T ss_dssp HHHTTGGGSSC---CGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC
T ss_pred hhHHHHHHhCC---CCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecCHHHHHHHHHhhhhcCcCcCeEEecCCCCCCC
Confidence 33455666666 56678999999999999999999999999999999999988874 378999999999888
Q ss_pred C-cccEEEeecC
Q 034578 80 P-NADAVFMKVA 90 (90)
Q Consensus 80 p-~~D~i~l~~v 90 (90)
| .+|+|++++|
T Consensus 233 p~~~D~v~~~~v 244 (332)
T 3i53_A 233 PAGAGGYVLSAV 244 (332)
T ss_dssp CCSCSEEEEESC
T ss_pred CCCCcEEEEehh
Confidence 8 5999999875
No 10
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.66 E-value=4.7e-16 Score=106.06 Aligned_cols=86 Identities=30% Similarity=0.599 Sum_probs=72.9
Q ss_pred CcchhhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCC-------CCCeeEEEec
Q 034578 2 ACTTKITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPT-------HEGVSHVGGD 74 (90)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~-------~~rv~~~~~d 74 (90)
...+....+.+++.++ +.+..+|||||||+|.++..+++++|+.+++++|+|.+++.+++ .++++++.+|
T Consensus 164 ~~~~~~~~~~~~~~~~---~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d 240 (374)
T 1qzz_A 164 SCDEDLAYEAPADAYD---WSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGD 240 (374)
T ss_dssp GGGSTTTTHHHHHTSC---CTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECC
T ss_pred HHhhHhHHHHHHHhCC---CCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeCHHHHHHHHHHHHhcCCCCceEEEeCC
Confidence 3444555677888887 66778999999999999999999999999999999888888765 2489999999
Q ss_pred CCCCCCc-ccEEEeecC
Q 034578 75 MFDAIPN-ADAVFMKVA 90 (90)
Q Consensus 75 ~~~~~p~-~D~i~l~~v 90 (90)
+++++|. +|+|+++++
T Consensus 241 ~~~~~~~~~D~v~~~~v 257 (374)
T 1qzz_A 241 FFKPLPVTADVVLLSFV 257 (374)
T ss_dssp TTSCCSCCEEEEEEESC
T ss_pred CCCcCCCCCCEEEEecc
Confidence 9987776 999999864
No 11
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.66 E-value=2.4e-16 Score=106.24 Aligned_cols=84 Identities=30% Similarity=0.558 Sum_probs=72.1
Q ss_pred cchhhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCC-------CCCeeEEEecC
Q 034578 3 CTTKITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPT-------HEGVSHVGGDM 75 (90)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~-------~~rv~~~~~d~ 75 (90)
..+....+.+++.++ +.+ .+|||||||+|.++..+++++|+.+++++|+|.+++.+++ .+|++++.+|+
T Consensus 151 ~~~~~~~~~~~~~~~---~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 226 (334)
T 2ip2_A 151 KASNLAFHEIPRLLD---FRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDM 226 (334)
T ss_dssp GGGHHHHHHHHHHSC---CTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCT
T ss_pred HHHHHHHHHHHHhCC---CCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCC
Confidence 345556778888887 566 8999999999999999999999999999999888887765 36899999999
Q ss_pred CCCCCc-ccEEEeecC
Q 034578 76 FDAIPN-ADAVFMKVA 90 (90)
Q Consensus 76 ~~~~p~-~D~i~l~~v 90 (90)
++++|. +|+|+++++
T Consensus 227 ~~~~~~~~D~v~~~~v 242 (334)
T 2ip2_A 227 LQEVPSNGDIYLLSRI 242 (334)
T ss_dssp TTCCCSSCSEEEEESC
T ss_pred CCCCCCCCCEEEEchh
Confidence 987776 999999875
No 12
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.64 E-value=5.5e-16 Score=105.36 Aligned_cols=85 Identities=31% Similarity=0.660 Sum_probs=72.1
Q ss_pred cchhhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCC-------CCCeeEEEecC
Q 034578 3 CTTKITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPT-------HEGVSHVGGDM 75 (90)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~-------~~rv~~~~~d~ 75 (90)
..+....+.+++.++ +.+..+|||||||+|.++..+++++|+++++++|+|.+++.+++ .+|++++.+|+
T Consensus 166 ~~~~~~~~~l~~~~~---~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 242 (360)
T 1tw3_A 166 CDQDVAFDAPAAAYD---WTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDF 242 (360)
T ss_dssp TTTTTTTHHHHHHSC---CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECTTHHHHHHHHHHHTTCTTTEEEEECCT
T ss_pred HHHHHhHHHHHHhCC---CccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecCHHHHHHHHHHHHhcCCCCceEEEeCCC
Confidence 344555677788887 66778999999999999999999999999999999888887765 24899999999
Q ss_pred CCCCCc-ccEEEeecC
Q 034578 76 FDAIPN-ADAVFMKVA 90 (90)
Q Consensus 76 ~~~~p~-~D~i~l~~v 90 (90)
++++|. +|+|+++++
T Consensus 243 ~~~~~~~~D~v~~~~v 258 (360)
T 1tw3_A 243 FEPLPRKADAIILSFV 258 (360)
T ss_dssp TSCCSSCEEEEEEESC
T ss_pred CCCCCCCccEEEEccc
Confidence 987776 999999864
No 13
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.64 E-value=4.8e-16 Score=105.92 Aligned_cols=81 Identities=23% Similarity=0.526 Sum_probs=70.7
Q ss_pred hhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCC-------CCCeeEEEecCCC-C
Q 034578 7 ITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPT-------HEGVSHVGGDMFD-A 78 (90)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~-------~~rv~~~~~d~~~-~ 78 (90)
..++.+++.++ +.+..+|||||||+|.++..+++++|+.+++++|+|.+++.+++ .+|++++.+|+++ +
T Consensus 177 ~~~~~l~~~~~---~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 253 (359)
T 1x19_A 177 FAIQLLLEEAK---LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNLPGAIDLVNENAAEKGVADRMRGIAVDIYKES 253 (359)
T ss_dssp HHHHHHHHHCC---CTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCTTTEEEEECCTTTSC
T ss_pred hhHHHHHHhcC---CCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCCCEEEEeCccccCC
Confidence 56678888887 66788999999999999999999999999999999888888764 3579999999998 5
Q ss_pred CCcccEEEeecC
Q 034578 79 IPNADAVFMKVA 90 (90)
Q Consensus 79 ~p~~D~i~l~~v 90 (90)
++.+|+|+++++
T Consensus 254 ~~~~D~v~~~~v 265 (359)
T 1x19_A 254 YPEADAVLFCRI 265 (359)
T ss_dssp CCCCSEEEEESC
T ss_pred CCCCCEEEEech
Confidence 666899999865
No 14
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.62 E-value=3.1e-16 Score=107.30 Aligned_cols=69 Identities=23% Similarity=0.409 Sum_probs=61.2
Q ss_pred CCCCeEEEecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCC-------CCCeeEEEecCCCC---CCc-ccEEEeecC
Q 034578 22 NNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPT-------HEGVSHVGGDMFDA---IPN-ADAVFMKVA 90 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~-------~~rv~~~~~d~~~~---~p~-~D~i~l~~v 90 (90)
.+..+|||||||+|.++..+++++|+++++++|+|.+++.+++ .+|++++.+|+++. +|. +|+|+++++
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~~v 257 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMSQF 257 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEESC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeCHHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEech
Confidence 4568999999999999999999999999999999999888765 15899999999983 674 999999875
No 15
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.61 E-value=2.5e-15 Score=100.98 Aligned_cols=87 Identities=14% Similarity=0.161 Sum_probs=73.7
Q ss_pred CCcchhhhHHHHHhhcccCCC--CCCCeEEEecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCC-------CCCeeEE
Q 034578 1 MACTTKITMKAFVSHYKVDGF--NNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPT-------HEGVSHV 71 (90)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~--~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~-------~~rv~~~ 71 (90)
|...+...+..+++.++ + .+..+|||+|||+|.++..+++++|+.+++++|++.+++.+++ .+|++++
T Consensus 144 ~~~~~~~~~~~~~~~~~---~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~ 220 (335)
T 2r3s_A 144 MSPMMANPAQLIAQLVN---ENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWASVLEVAKENARIQGVASRYHTI 220 (335)
T ss_dssp SGGGGHHHHHHHHHHHT---C--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHHTCGGGEEEE
T ss_pred HHHHHhhhHHHHHHhcc---cccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCcceEEE
Confidence 44555666778888887 5 6778999999999999999999999999999999888887765 2579999
Q ss_pred EecCCC-CCCc-ccEEEeecC
Q 034578 72 GGDMFD-AIPN-ADAVFMKVA 90 (90)
Q Consensus 72 ~~d~~~-~~p~-~D~i~l~~v 90 (90)
.+|+++ ++|. +|+|+++++
T Consensus 221 ~~d~~~~~~~~~~D~v~~~~~ 241 (335)
T 2r3s_A 221 AGSAFEVDYGNDYDLVLLPNF 241 (335)
T ss_dssp ESCTTTSCCCSCEEEEEEESC
T ss_pred ecccccCCCCCCCcEEEEcch
Confidence 999998 6666 999999764
No 16
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.60 E-value=1.8e-15 Score=102.55 Aligned_cols=77 Identities=27% Similarity=0.433 Sum_probs=66.7
Q ss_pred HHHhhcccCCCCC-CCeEEEecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCC-------CCCeeEEEecCCCC---C
Q 034578 11 AFVSHYKVDGFNN-IRSMVDVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPT-------HEGVSHVGGDMFDA---I 79 (90)
Q Consensus 11 ~~~~~~~~~~~~~-~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~-------~~rv~~~~~d~~~~---~ 79 (90)
.+++.++ +.+ ..+|||||||+|.++..+++++|+.+++++|+|.+++.+++ .+|++++.+|+++. .
T Consensus 169 ~~l~~~~---~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 245 (352)
T 3mcz_A 169 DVVSELG---VFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFE 245 (352)
T ss_dssp HHHHTCG---GGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGT
T ss_pred HHHHhCC---CcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcccC
Confidence 6788888 445 78999999999999999999999999999999888887764 25899999999983 5
Q ss_pred Cc-ccEEEeecC
Q 034578 80 PN-ADAVFMKVA 90 (90)
Q Consensus 80 p~-~D~i~l~~v 90 (90)
+. ||+|+++++
T Consensus 246 ~~~~D~v~~~~v 257 (352)
T 3mcz_A 246 GGAADVVMLNDC 257 (352)
T ss_dssp TCCEEEEEEESC
T ss_pred CCCccEEEEecc
Confidence 65 999999875
No 17
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.57 E-value=1.4e-14 Score=95.78 Aligned_cols=68 Identities=24% Similarity=0.291 Sum_probs=58.9
Q ss_pred CCCCeEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhCCC-------CCCeeEEEecCCC-CCCcccEEEeec
Q 034578 22 NNIRSMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATAPT-------HEGVSHVGGDMFD-AIPNADAVFMKV 89 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a~~-------~~rv~~~~~d~~~-~~p~~D~i~l~~ 89 (90)
++..+|||||||+|.++..+++++ |+++++++|+ |.|++.|++ ..+++++.+|+.+ +++.+|+|++..
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~ 147 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNF 147 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEES
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeee
Confidence 456799999999999999999985 6789999999 999998865 2589999999988 666799998864
No 18
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.53 E-value=7.9e-14 Score=91.19 Aligned_cols=80 Identities=19% Similarity=0.233 Sum_probs=68.1
Q ss_pred hhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCC-CCCc--
Q 034578 6 KITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTHEGVSHVGGDMFD-AIPN-- 81 (90)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~-~~p~-- 81 (90)
....+.+++.++ ..+..+|||||||+|.++..+++ |..+++++|+ |.+++.+++..+++++.+|+.+ +++.
T Consensus 20 ~~~~~~l~~~~~---~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~ 94 (261)
T 3ege_A 20 IRIVNAIINLLN---LPKGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKS 94 (261)
T ss_dssp HHHHHHHHHHHC---CCTTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTC
T ss_pred HHHHHHHHHHhC---CCCCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCC
Confidence 345677777776 55678999999999999999998 7889999999 9999999988899999999987 5553
Q ss_pred ccEEEeecC
Q 034578 82 ADAVFMKVA 90 (90)
Q Consensus 82 ~D~i~l~~v 90 (90)
+|+|+++++
T Consensus 95 fD~v~~~~~ 103 (261)
T 3ege_A 95 VDGVISILA 103 (261)
T ss_dssp BSEEEEESC
T ss_pred EeEEEEcch
Confidence 999998763
No 19
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.51 E-value=1.4e-13 Score=90.88 Aligned_cols=65 Identities=18% Similarity=0.212 Sum_probs=57.8
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCC-CCCc--ccEEEeec
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTHEGVSHVGGDMFD-AIPN--ADAVFMKV 89 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~-~~p~--~D~i~l~~ 89 (90)
...+|||||||+|.++..+++.+ .+++++|+ +.|++.|++.++++++.+|+.+ +++. +|+|++..
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~~--~~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~ 107 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEFF--ERVHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQ 107 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTTC--SEEEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECS
T ss_pred CCCCEEEEcCCCCHHHHHHHHhC--CEEEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEee
Confidence 35789999999999999999886 57999999 9999999999999999999987 6664 89999865
No 20
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.50 E-value=1.8e-13 Score=87.71 Aligned_cols=79 Identities=22% Similarity=0.273 Sum_probs=64.5
Q ss_pred HHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC----CCCeeEEEecCCC-CCCc-c
Q 034578 10 KAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT----HEGVSHVGGDMFD-AIPN-A 82 (90)
Q Consensus 10 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~----~~rv~~~~~d~~~-~~p~-~ 82 (90)
+.+++.++. ..+..+|||+|||+|.++..+++.+|..+++++|+ |.+++.+++ .++++++.+|+.+ +.+. +
T Consensus 33 ~~~~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~f 110 (234)
T 3dtn_A 33 GVSVSIASV--DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFEEKY 110 (234)
T ss_dssp HHHHHTCCC--SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCCSCE
T ss_pred HHHHHHhhc--CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCCCCc
Confidence 455555542 34568999999999999999999999999999999 999887765 3589999999988 4444 9
Q ss_pred cEEEeecC
Q 034578 83 DAVFMKVA 90 (90)
Q Consensus 83 D~i~l~~v 90 (90)
|+|++..+
T Consensus 111 D~v~~~~~ 118 (234)
T 3dtn_A 111 DMVVSALS 118 (234)
T ss_dssp EEEEEESC
T ss_pred eEEEEeCc
Confidence 99998753
No 21
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.50 E-value=1.3e-13 Score=89.43 Aligned_cols=81 Identities=19% Similarity=0.335 Sum_probs=66.5
Q ss_pred hhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC----CCeeEEEecCCC-CC
Q 034578 6 KITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH----EGVSHVGGDMFD-AI 79 (90)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~----~rv~~~~~d~~~-~~ 79 (90)
....+.+++.++ ..+..+|||+|||+|.++..+++++ ..+++++|+ |.+++.+++. ++++++.+|+.+ ++
T Consensus 41 ~~~~~~~~~~~~---~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~ 116 (266)
T 3ujc_A 41 LEATKKILSDIE---LNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEF 116 (266)
T ss_dssp HHHHHHHTTTCC---CCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCC
T ss_pred HHHHHHHHHhcC---CCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCC
Confidence 344566677666 5667899999999999999999987 789999999 9998887653 689999999987 55
Q ss_pred Cc--ccEEEeecC
Q 034578 80 PN--ADAVFMKVA 90 (90)
Q Consensus 80 p~--~D~i~l~~v 90 (90)
+. +|+|++.++
T Consensus 117 ~~~~fD~v~~~~~ 129 (266)
T 3ujc_A 117 PENNFDLIYSRDA 129 (266)
T ss_dssp CTTCEEEEEEESC
T ss_pred CCCcEEEEeHHHH
Confidence 43 999998753
No 22
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.48 E-value=1.7e-13 Score=88.75 Aligned_cols=84 Identities=13% Similarity=0.199 Sum_probs=69.3
Q ss_pred chhhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-CCCeeEEEecCCCCCC-
Q 034578 4 TTKITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-HEGVSHVGGDMFDAIP- 80 (90)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-~~rv~~~~~d~~~~~p- 80 (90)
.+...+..+++.++ ..+..+|||+|||+|.++..+++++|..+++++|+ |.+++.+++ .++++++.+|+.+..+
T Consensus 17 ~~~~~~~~l~~~~~---~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~ 93 (259)
T 2p35_A 17 ERTRPARDLLAQVP---LERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWKPA 93 (259)
T ss_dssp GGGHHHHHHHTTCC---CSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCCCS
T ss_pred HHHHHHHHHHHhcC---CCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcCcc
Confidence 34455667777776 55678999999999999999999999999999999 999998876 4789999999987223
Q ss_pred c-ccEEEeecC
Q 034578 81 N-ADAVFMKVA 90 (90)
Q Consensus 81 ~-~D~i~l~~v 90 (90)
. +|+|+++++
T Consensus 94 ~~fD~v~~~~~ 104 (259)
T 2p35_A 94 QKADLLYANAV 104 (259)
T ss_dssp SCEEEEEEESC
T ss_pred CCcCEEEEeCc
Confidence 2 999998753
No 23
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.48 E-value=3.4e-13 Score=87.29 Aligned_cols=81 Identities=19% Similarity=0.248 Sum_probs=66.1
Q ss_pred hhhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-------CCCeeEEEecCC
Q 034578 5 TKITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-------HEGVSHVGGDMF 76 (90)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-------~~rv~~~~~d~~ 76 (90)
+....+.+++.++ ..+..+|||||||+|.++..+++.+ +.+++++|+ |.+++.+++ .++++++.+|+.
T Consensus 21 ~~~~~~~l~~~~~---~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~ 96 (256)
T 1nkv_A 21 TEEKYATLGRVLR---MKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAA 96 (256)
T ss_dssp CHHHHHHHHHHTC---CCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCT
T ss_pred CHHHHHHHHHhcC---CCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChH
Confidence 4455677777776 5677899999999999999999988 678999999 999988865 258999999998
Q ss_pred C-CCCc-ccEEEeec
Q 034578 77 D-AIPN-ADAVFMKV 89 (90)
Q Consensus 77 ~-~~p~-~D~i~l~~ 89 (90)
+ +.+. +|+|++..
T Consensus 97 ~~~~~~~fD~V~~~~ 111 (256)
T 1nkv_A 97 GYVANEKCDVAACVG 111 (256)
T ss_dssp TCCCSSCEEEEEEES
T ss_pred hCCcCCCCCEEEECC
Confidence 7 3333 99999764
No 24
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.47 E-value=2.6e-13 Score=85.66 Aligned_cols=80 Identities=18% Similarity=0.246 Sum_probs=66.5
Q ss_pred hhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC------CCeeEEEecCCCCC
Q 034578 7 ITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH------EGVSHVGGDMFDAI 79 (90)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~------~rv~~~~~d~~~~~ 79 (90)
.+...+++.++ ..+..+|||+|||+|.++..+++.+|..+++++|+ |.+++.++++ ++++++.+|+.+.+
T Consensus 27 ~i~~~~l~~l~---~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~ 103 (204)
T 3e05_A 27 EVRAVTLSKLR---LQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGL 103 (204)
T ss_dssp HHHHHHHHHTT---CCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTC
T ss_pred HHHHHHHHHcC---CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhh
Confidence 34456667776 56678999999999999999999999999999999 9999988762 68999999997743
Q ss_pred ---CcccEEEeec
Q 034578 80 ---PNADAVFMKV 89 (90)
Q Consensus 80 ---p~~D~i~l~~ 89 (90)
+.+|+|++..
T Consensus 104 ~~~~~~D~i~~~~ 116 (204)
T 3e05_A 104 DDLPDPDRVFIGG 116 (204)
T ss_dssp TTSCCCSEEEESC
T ss_pred hcCCCCCEEEECC
Confidence 3499998763
No 25
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.47 E-value=1.2e-13 Score=87.02 Aligned_cols=80 Identities=19% Similarity=0.384 Sum_probs=64.8
Q ss_pred hhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-------CCeeEEEecCCC
Q 034578 6 KITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-------EGVSHVGGDMFD 77 (90)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-------~rv~~~~~d~~~ 77 (90)
....+.+++.++ ..+. +|||+|||+|.++..++++ |..+++++|+ |.+++.+++. ++++++.+|+.+
T Consensus 30 ~~~~~~~~~~~~---~~~~-~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 104 (219)
T 3dlc_A 30 PIIAENIINRFG---ITAG-TCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHN 104 (219)
T ss_dssp HHHHHHHHHHHC---CCEE-EEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTB
T ss_pred HHHHHHHHHhcC---CCCC-EEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHH
Confidence 345566666666 3333 9999999999999999998 8899999999 9999888652 589999999987
Q ss_pred -CCCc--ccEEEeecC
Q 034578 78 -AIPN--ADAVFMKVA 90 (90)
Q Consensus 78 -~~p~--~D~i~l~~v 90 (90)
+++. +|+|++..+
T Consensus 105 ~~~~~~~~D~v~~~~~ 120 (219)
T 3dlc_A 105 IPIEDNYADLIVSRGS 120 (219)
T ss_dssp CSSCTTCEEEEEEESC
T ss_pred CCCCcccccEEEECch
Confidence 5553 999998753
No 26
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.46 E-value=8.6e-14 Score=92.84 Aligned_cols=80 Identities=13% Similarity=0.248 Sum_probs=65.9
Q ss_pred hhhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-------CCeeEEEecCC
Q 034578 5 TKITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-------EGVSHVGGDMF 76 (90)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-------~rv~~~~~d~~ 76 (90)
++.+++.+++.++ ..+..+|||+|||+|.++..+++. |..+++++|+ +.+++.|+++ +|++++.+|++
T Consensus 108 te~lv~~~l~~~~---~~~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~ 183 (284)
T 1nv8_A 108 TEELVELALELIR---KYGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFL 183 (284)
T ss_dssp HHHHHHHHHHHHH---HHTCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTT
T ss_pred HHHHHHHHHHHhc---ccCCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcch
Confidence 4556677776665 234578999999999999999999 9999999999 9999988752 46999999999
Q ss_pred CCCCc-c---cEEEee
Q 034578 77 DAIPN-A---DAVFMK 88 (90)
Q Consensus 77 ~~~p~-~---D~i~l~ 88 (90)
++++. + |+|+.+
T Consensus 184 ~~~~~~f~~~D~Ivsn 199 (284)
T 1nv8_A 184 EPFKEKFASIEMILSN 199 (284)
T ss_dssp GGGGGGTTTCCEEEEC
T ss_pred hhcccccCCCCEEEEc
Confidence 86554 8 999875
No 27
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.46 E-value=5.8e-13 Score=86.23 Aligned_cols=80 Identities=18% Similarity=0.210 Sum_probs=64.5
Q ss_pred hhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-------CCCeeEEEecCCC-
Q 034578 7 ITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-------HEGVSHVGGDMFD- 77 (90)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-------~~rv~~~~~d~~~- 77 (90)
.....+++.+.. +.+..+|||+|||+|.++..+++.+|. +++++|+ |.+++.+++ .++++++.+|+.+
T Consensus 32 ~~~~~~l~~l~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 108 (257)
T 3f4k_A 32 EATRKAVSFINE--LTDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNL 108 (257)
T ss_dssp HHHHHHHTTSCC--CCTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC
T ss_pred HHHHHHHHHHhc--CCCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhC
Confidence 445566666642 556679999999999999999999986 9999999 999988765 2569999999976
Q ss_pred CCC-c-ccEEEeec
Q 034578 78 AIP-N-ADAVFMKV 89 (90)
Q Consensus 78 ~~p-~-~D~i~l~~ 89 (90)
+++ . +|+|++..
T Consensus 109 ~~~~~~fD~v~~~~ 122 (257)
T 3f4k_A 109 PFQNEELDLIWSEG 122 (257)
T ss_dssp SSCTTCEEEEEEES
T ss_pred CCCCCCEEEEEecC
Confidence 554 3 99999865
No 28
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.45 E-value=9.9e-14 Score=88.23 Aligned_cols=82 Identities=18% Similarity=0.233 Sum_probs=65.3
Q ss_pred hhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-----------CCeeEEEe
Q 034578 6 KITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-----------EGVSHVGG 73 (90)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-----------~rv~~~~~ 73 (90)
....+.+++.+. ..+..+|||+|||+|.++..++++.|..+++++|+ |.+++.++++ .+++++.+
T Consensus 15 ~~~~~~l~~~l~---~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 91 (219)
T 3jwg_A 15 QQRLGTVVAVLK---SVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQS 91 (219)
T ss_dssp HHHHHHHHHHHH---HTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEEC
T ss_pred HHHHHHHHHHHh---hcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeC
Confidence 344555666665 34568999999999999999999999999999999 9999988752 28999999
Q ss_pred cCCC-CCC--cccEEEeecC
Q 034578 74 DMFD-AIP--NADAVFMKVA 90 (90)
Q Consensus 74 d~~~-~~p--~~D~i~l~~v 90 (90)
|+.. +.+ .+|+|++..+
T Consensus 92 d~~~~~~~~~~fD~V~~~~~ 111 (219)
T 3jwg_A 92 SLVYRDKRFSGYDAATVIEV 111 (219)
T ss_dssp CSSSCCGGGTTCSEEEEESC
T ss_pred cccccccccCCCCEEEEHHH
Confidence 9965 332 3999998753
No 29
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.45 E-value=3e-13 Score=88.33 Aligned_cols=81 Identities=16% Similarity=0.245 Sum_probs=66.7
Q ss_pred hhhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-------CCCeeEEEecCC
Q 034578 5 TKITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-------HEGVSHVGGDMF 76 (90)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-------~~rv~~~~~d~~ 76 (90)
++...+.+++.++ ..+..+|||||||+|.++..+++++ ..+++++|+ +.+++.+++ .++++++.+|+.
T Consensus 46 ~~~~~~~l~~~~~---~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 121 (273)
T 3bus_A 46 TDRLTDEMIALLD---VRSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAM 121 (273)
T ss_dssp HHHHHHHHHHHSC---CCTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred HHHHHHHHHHhcC---CCCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccc
Confidence 4455677777777 5677899999999999999999987 689999999 998887764 257999999998
Q ss_pred C-CCCc--ccEEEeec
Q 034578 77 D-AIPN--ADAVFMKV 89 (90)
Q Consensus 77 ~-~~p~--~D~i~l~~ 89 (90)
+ +++. +|+|++..
T Consensus 122 ~~~~~~~~fD~v~~~~ 137 (273)
T 3bus_A 122 DLPFEDASFDAVWALE 137 (273)
T ss_dssp SCCSCTTCEEEEEEES
T ss_pred cCCCCCCCccEEEEec
Confidence 7 5553 99999765
No 30
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.45 E-value=1.3e-13 Score=89.77 Aligned_cols=67 Identities=13% Similarity=0.098 Sum_probs=58.6
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-------CCCeeEEEecCCCCCC---cccEEEeec
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-------HEGVSHVGGDMFDAIP---NADAVFMKV 89 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-------~~rv~~~~~d~~~~~p---~~D~i~l~~ 89 (90)
+..+|+|||||+|.+++.+++..|..+++++|+ |.+++.|++ .+++++..+|.+++++ .+|+|++..
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG 92 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAG 92 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcC
Confidence 457999999999999999999999999999999 999998876 2589999999998765 389988653
No 31
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.45 E-value=1.2e-13 Score=87.76 Aligned_cols=82 Identities=21% Similarity=0.256 Sum_probs=65.5
Q ss_pred hhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-----------CCeeEEEe
Q 034578 6 KITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-----------EGVSHVGG 73 (90)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-----------~rv~~~~~ 73 (90)
....+.+++.++ ..+..+|||+|||+|.++..+++++|..+++++|+ |.+++.++++ .+++++.+
T Consensus 15 ~~~~~~l~~~l~---~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 91 (217)
T 3jwh_A 15 QQRMNGVVAALK---QSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQG 91 (217)
T ss_dssp HHHHHHHHHHHH---HTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEEC
T ss_pred HHHHHHHHHHHH---hcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeC
Confidence 344566666666 34568999999999999999999999899999999 9999888652 28999999
Q ss_pred cCCC-CCC--cccEEEeecC
Q 034578 74 DMFD-AIP--NADAVFMKVA 90 (90)
Q Consensus 74 d~~~-~~p--~~D~i~l~~v 90 (90)
|+.. +.+ .+|+|++..+
T Consensus 92 d~~~~~~~~~~fD~v~~~~~ 111 (217)
T 3jwh_A 92 ALTYQDKRFHGYDAATVIEV 111 (217)
T ss_dssp CTTSCCGGGCSCSEEEEESC
T ss_pred CcccccccCCCcCEEeeHHH
Confidence 9865 332 3999998753
No 32
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.44 E-value=5.9e-13 Score=87.02 Aligned_cols=80 Identities=18% Similarity=0.179 Sum_probs=64.5
Q ss_pred hhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-------CCCeeEEEecCCC-
Q 034578 7 ITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-------HEGVSHVGGDMFD- 77 (90)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-------~~rv~~~~~d~~~- 77 (90)
.....+++.++. +.+..+|||||||+|.++..+++. |..+++++|+ |.+++.+++ .++++++.+|+.+
T Consensus 32 ~~~~~~l~~l~~--~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 108 (267)
T 3kkz_A 32 EVTLKALSFIDN--LTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDL 108 (267)
T ss_dssp HHHHHHHTTCCC--CCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC
T ss_pred HHHHHHHHhccc--CCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhC
Confidence 344556665552 556789999999999999999998 8889999999 999988765 2679999999977
Q ss_pred CCCc--ccEEEeec
Q 034578 78 AIPN--ADAVFMKV 89 (90)
Q Consensus 78 ~~p~--~D~i~l~~ 89 (90)
+++. +|+|++..
T Consensus 109 ~~~~~~fD~i~~~~ 122 (267)
T 3kkz_A 109 PFRNEELDLIWSEG 122 (267)
T ss_dssp CCCTTCEEEEEESS
T ss_pred CCCCCCEEEEEEcC
Confidence 5443 99999865
No 33
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.44 E-value=2.7e-13 Score=88.84 Aligned_cols=70 Identities=16% Similarity=0.345 Sum_probs=60.3
Q ss_pred CCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC------CCeeEEEecCCC-CCCc--ccEEEeecC
Q 034578 21 FNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH------EGVSHVGGDMFD-AIPN--ADAVFMKVA 90 (90)
Q Consensus 21 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~------~rv~~~~~d~~~-~~p~--~D~i~l~~v 90 (90)
+.+..+|||||||+|.++..+++.+|..+++++|+ |.+++.+++. ++++++.+|+.+ +++. +|+|+++++
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 114 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFV 114 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESC
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEech
Confidence 55678999999999999999999999999999999 9999888652 579999999987 4443 999998753
No 34
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.44 E-value=3.9e-13 Score=88.89 Aligned_cols=83 Identities=17% Similarity=0.168 Sum_probs=66.6
Q ss_pred hhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCC-CeEEEeeh-HHHHHhCCC-----CCCeeEEEecCCC-
Q 034578 6 KITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPH-IKGINFDL-QHVIATAPT-----HEGVSHVGGDMFD- 77 (90)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-p~~~~~a~~-----~~rv~~~~~d~~~- 77 (90)
....+.+++.+.. ..+..+|||||||+|.++..+++.+|. .+++++|+ |.+++.+++ ..+++++.+|+.+
T Consensus 7 ~~~~~~~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 84 (284)
T 3gu3_A 7 DDYVSFLVNTVWK--ITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEI 84 (284)
T ss_dssp HHHHHHHHHTTSC--CCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTC
T ss_pred hHHHHHHHHHHhc--cCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhc
Confidence 3445556666542 567789999999999999999999995 89999999 999887765 2489999999988
Q ss_pred CCCc-ccEEEeecC
Q 034578 78 AIPN-ADAVFMKVA 90 (90)
Q Consensus 78 ~~p~-~D~i~l~~v 90 (90)
+.++ +|+|+++.+
T Consensus 85 ~~~~~fD~v~~~~~ 98 (284)
T 3gu3_A 85 ELNDKYDIAICHAF 98 (284)
T ss_dssp CCSSCEEEEEEESC
T ss_pred CcCCCeeEEEECCh
Confidence 4454 999998753
No 35
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.44 E-value=4.4e-13 Score=89.27 Aligned_cols=42 Identities=19% Similarity=0.348 Sum_probs=38.6
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
...+|||||||+|.++..+++++|..+++++|+ +.+++.|++
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~ 88 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQ 88 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHH
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 568999999999999999999999999999999 999888764
No 36
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.43 E-value=2.9e-13 Score=88.08 Aligned_cols=79 Identities=19% Similarity=0.283 Sum_probs=64.1
Q ss_pred hhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC------CCeeEEEecCCC-
Q 034578 6 KITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH------EGVSHVGGDMFD- 77 (90)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~------~rv~~~~~d~~~- 77 (90)
....+.+++.++ ..+..+|||||||+|.++..+++..+ +++++|+ |.+++.+++. ++++++.+|+.+
T Consensus 23 ~~~~~~l~~~l~---~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l 97 (260)
T 1vl5_A 23 GSDLAKLMQIAA---LKGNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQM 97 (260)
T ss_dssp CCCHHHHHHHHT---CCSCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CC
T ss_pred HHHHHHHHHHhC---CCCCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhC
Confidence 344566777776 55678999999999999999999875 8999999 9999887652 579999999987
Q ss_pred CCCc--ccEEEeec
Q 034578 78 AIPN--ADAVFMKV 89 (90)
Q Consensus 78 ~~p~--~D~i~l~~ 89 (90)
+++. +|+|+++.
T Consensus 98 ~~~~~~fD~V~~~~ 111 (260)
T 1vl5_A 98 PFTDERFHIVTCRI 111 (260)
T ss_dssp CSCTTCEEEEEEES
T ss_pred CCCCCCEEEEEEhh
Confidence 5653 99999875
No 37
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.42 E-value=4e-13 Score=88.88 Aligned_cols=81 Identities=11% Similarity=0.153 Sum_probs=66.0
Q ss_pred hhhhHHHHHhhc----ccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-------CCCeeEEE
Q 034578 5 TKITMKAFVSHY----KVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-------HEGVSHVG 72 (90)
Q Consensus 5 ~~~~~~~~~~~~----~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-------~~rv~~~~ 72 (90)
++...+.+++.+ . +.+..+|||+|||+|.++..+++++ +.+++++|+ +.+++.+++ .++++++.
T Consensus 63 ~~~~~~~l~~~l~~~~~---~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~ 138 (297)
T 2o57_A 63 SLRTDEWLASELAMTGV---LQRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKY 138 (297)
T ss_dssp HHHHHHHHHHHHHHTTC---CCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEE
T ss_pred HHHHHHHHHHHhhhccC---CCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEE
Confidence 344566777777 4 5667899999999999999999986 469999999 999888765 26899999
Q ss_pred ecCCC-CCCc--ccEEEeec
Q 034578 73 GDMFD-AIPN--ADAVFMKV 89 (90)
Q Consensus 73 ~d~~~-~~p~--~D~i~l~~ 89 (90)
+|+.+ +++. +|+|++..
T Consensus 139 ~d~~~~~~~~~~fD~v~~~~ 158 (297)
T 2o57_A 139 GSFLEIPCEDNSYDFIWSQD 158 (297)
T ss_dssp CCTTSCSSCTTCEEEEEEES
T ss_pred cCcccCCCCCCCEeEEEecc
Confidence 99988 5553 99999875
No 38
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.41 E-value=4.2e-13 Score=85.09 Aligned_cols=80 Identities=19% Similarity=0.303 Sum_probs=66.6
Q ss_pred hHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHC-CCCeEEEeeh-HHHHHhCCCC------CCeeEEEecCCC-C
Q 034578 8 TMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSY-PHIKGINFDL-QHVIATAPTH------EGVSHVGGDMFD-A 78 (90)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-p~~~~~a~~~------~rv~~~~~d~~~-~ 78 (90)
..+.+++.++ ..+..+|||+|||+|.++..+++.. |..+++++|+ +.+++.+++. ++++++.+|+.+ +
T Consensus 25 ~~~~~~~~~~---~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~ 101 (219)
T 3dh0_A 25 DPEKVLKEFG---LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIP 101 (219)
T ss_dssp CHHHHHHHHT---CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCS
T ss_pred CHHHHHHHhC---CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCC
Confidence 3566777776 5667899999999999999999997 8899999999 9999888752 579999999987 4
Q ss_pred CCc--ccEEEeecC
Q 034578 79 IPN--ADAVFMKVA 90 (90)
Q Consensus 79 ~p~--~D~i~l~~v 90 (90)
++. +|+|++..+
T Consensus 102 ~~~~~fD~v~~~~~ 115 (219)
T 3dh0_A 102 LPDNTVDFIFMAFT 115 (219)
T ss_dssp SCSSCEEEEEEESC
T ss_pred CCCCCeeEEEeehh
Confidence 543 999998753
No 39
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.41 E-value=1.9e-13 Score=84.03 Aligned_cols=80 Identities=19% Similarity=0.238 Sum_probs=65.8
Q ss_pred hhhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC------CCeeEEEecCCC
Q 034578 5 TKITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH------EGVSHVGGDMFD 77 (90)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~------~rv~~~~~d~~~ 77 (90)
...+.+.+++.++ ..+..+|||+|||+|.++..+++ +..+++++|+ |.+++.++++ ++++++.+|+.+
T Consensus 20 ~~~~~~~~~~~~~---~~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~ 94 (183)
T 2yxd_A 20 KEEIRAVSIGKLN---LNKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED 94 (183)
T ss_dssp CHHHHHHHHHHHC---CCTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH
T ss_pred HHHHHHHHHHHcC---CCCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc
Confidence 3455667777776 55678999999999999999999 7899999999 9999888762 689999999987
Q ss_pred CCC--cccEEEeec
Q 034578 78 AIP--NADAVFMKV 89 (90)
Q Consensus 78 ~~p--~~D~i~l~~ 89 (90)
+++ .+|+|++..
T Consensus 95 ~~~~~~~D~i~~~~ 108 (183)
T 2yxd_A 95 VLDKLEFNKAFIGG 108 (183)
T ss_dssp HGGGCCCSEEEECS
T ss_pred cccCCCCcEEEECC
Confidence 555 399999865
No 40
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.41 E-value=3.5e-13 Score=88.02 Aligned_cols=67 Identities=12% Similarity=0.020 Sum_probs=58.4
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-------CCCeeEEEecCCCCCC---cccEEEeec
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-------HEGVSHVGGDMFDAIP---NADAVFMKV 89 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-------~~rv~~~~~d~~~~~p---~~D~i~l~~ 89 (90)
+..+|+|||||+|.+++.+++..|..+++++|+ |.+++.|++ .+++++..+|.++.++ .+|+|++..
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaG 98 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICG 98 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeC
Confidence 457999999999999999999999999999999 999998876 2689999999999553 389988654
No 41
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.41 E-value=2.4e-13 Score=89.51 Aligned_cols=67 Identities=15% Similarity=0.177 Sum_probs=58.4
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-------CCCeeEEEecCCCCCC--c-ccEEEeec
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-------HEGVSHVGGDMFDAIP--N-ADAVFMKV 89 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-------~~rv~~~~~d~~~~~p--~-~D~i~l~~ 89 (90)
+..+|+|||||+|.+++.+++..|..+++++|+ |.+++.|++ .+++++..+|.++.++ . +|+|++..
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviag 98 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAG 98 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeC
Confidence 457999999999999999999999999999999 999998876 2679999999999654 2 89988653
No 42
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.40 E-value=5e-13 Score=93.73 Aligned_cols=81 Identities=17% Similarity=0.256 Sum_probs=66.1
Q ss_pred hhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC---------------CCCee
Q 034578 6 KITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT---------------HEGVS 69 (90)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~---------------~~rv~ 69 (90)
......+++.+. ..+..+|||||||+|.++..+++.++..+++++|+ |.+++.|++ .++++
T Consensus 159 ~~~i~~il~~l~---l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVe 235 (438)
T 3uwp_A 159 FDLVAQMIDEIK---MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYT 235 (438)
T ss_dssp HHHHHHHHHHHC---CCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEE
T ss_pred HHHHHHHHHhcC---CCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeE
Confidence 345677777776 66778999999999999999999888778999999 888777653 26899
Q ss_pred EEEecCCC-CC----CcccEEEeec
Q 034578 70 HVGGDMFD-AI----PNADAVFMKV 89 (90)
Q Consensus 70 ~~~~d~~~-~~----p~~D~i~l~~ 89 (90)
|+.+|+++ ++ +.+|+|++++
T Consensus 236 fi~GD~~~lp~~d~~~~aDVVf~Nn 260 (438)
T 3uwp_A 236 LERGDFLSEEWRERIANTSVIFVNN 260 (438)
T ss_dssp EEECCTTSHHHHHHHHTCSEEEECC
T ss_pred EEECcccCCccccccCCccEEEEcc
Confidence 99999998 44 2489999764
No 43
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.40 E-value=3.4e-13 Score=85.62 Aligned_cols=73 Identities=12% Similarity=0.122 Sum_probs=58.4
Q ss_pred HHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC------------------CCCeeEE
Q 034578 11 AFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT------------------HEGVSHV 71 (90)
Q Consensus 11 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~------------------~~rv~~~ 71 (90)
.+++.+. ..+..+|||+|||+|..+..++++ ..+++++|+ +.|++.|++ ..+++++
T Consensus 13 ~~~~~l~---~~~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~ 87 (203)
T 1pjz_A 13 QYWSSLN---VVPGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIW 87 (203)
T ss_dssp HHHHHHC---CCTTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEE
T ss_pred HHHHhcc---cCCCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEE
Confidence 3444454 456789999999999999999997 569999999 999998764 2579999
Q ss_pred EecCCC-CCC---cccEEEee
Q 034578 72 GGDMFD-AIP---NADAVFMK 88 (90)
Q Consensus 72 ~~d~~~-~~p---~~D~i~l~ 88 (90)
.+|+++ +.+ .||+|+.+
T Consensus 88 ~~d~~~l~~~~~~~fD~v~~~ 108 (203)
T 1pjz_A 88 CGDFFALTARDIGHCAAFYDR 108 (203)
T ss_dssp EECCSSSTHHHHHSEEEEEEE
T ss_pred ECccccCCcccCCCEEEEEEC
Confidence 999988 433 39999864
No 44
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.40 E-value=4.7e-13 Score=88.04 Aligned_cols=79 Identities=18% Similarity=0.193 Sum_probs=64.1
Q ss_pred hhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-CCeeEEEecCCC-CCCc-c
Q 034578 7 ITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-EGVSHVGGDMFD-AIPN-A 82 (90)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-~rv~~~~~d~~~-~~p~-~ 82 (90)
...+.+++.++ ..+..+|||||||+|.++..+++ |..+++++|+ |.+++.+++. +++++..+|+.+ +++. +
T Consensus 44 ~~~~~l~~~l~---~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~f 118 (279)
T 3ccf_A 44 QYGEDLLQLLN---PQPGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNYPHLHFDVADARNFRVDKPL 118 (279)
T ss_dssp SSCCHHHHHHC---CCTTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCCSSCE
T ss_pred HHHHHHHHHhC---CCCCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCcCCCc
Confidence 34455666665 45668999999999999999998 7889999999 9999988763 689999999987 4444 9
Q ss_pred cEEEeecC
Q 034578 83 DAVFMKVA 90 (90)
Q Consensus 83 D~i~l~~v 90 (90)
|+|+++++
T Consensus 119 D~v~~~~~ 126 (279)
T 3ccf_A 119 DAVFSNAM 126 (279)
T ss_dssp EEEEEESC
T ss_pred CEEEEcch
Confidence 99998753
No 45
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.40 E-value=7.2e-13 Score=88.62 Aligned_cols=78 Identities=14% Similarity=0.162 Sum_probs=63.4
Q ss_pred HHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-------CCCeeEEEecCCC-CC
Q 034578 9 MKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-------HEGVSHVGGDMFD-AI 79 (90)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-------~~rv~~~~~d~~~-~~ 79 (90)
.+.+++.++. +.+..+|||+|||+|.++..+++++ ..+++++|+ +.+++.+++ .++++++.+|+.+ ++
T Consensus 105 ~~~l~~~l~~--~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 181 (312)
T 3vc1_A 105 AEFLMDHLGQ--AGPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPF 181 (312)
T ss_dssp HHHHHTTSCC--CCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC
T ss_pred HHHHHHHhcc--CCCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCC
Confidence 3456666652 4567899999999999999999986 578999999 999988875 2589999999987 55
Q ss_pred C-c-ccEEEeec
Q 034578 80 P-N-ADAVFMKV 89 (90)
Q Consensus 80 p-~-~D~i~l~~ 89 (90)
+ . +|+|++..
T Consensus 182 ~~~~fD~V~~~~ 193 (312)
T 3vc1_A 182 DKGAVTASWNNE 193 (312)
T ss_dssp CTTCEEEEEEES
T ss_pred CCCCEeEEEECC
Confidence 5 3 99999865
No 46
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.40 E-value=7.3e-13 Score=87.37 Aligned_cols=80 Identities=16% Similarity=0.303 Sum_probs=65.8
Q ss_pred hhhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC------CCeeEEEecCCC
Q 034578 5 TKITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH------EGVSHVGGDMFD 77 (90)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~------~rv~~~~~d~~~ 77 (90)
++.+++.+++.++ .+..+|||+|||+|.++..+++.+|..+++++|+ |.+++.++++ ++++++.+|+++
T Consensus 95 te~l~~~~l~~~~----~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~ 170 (276)
T 2b3t_A 95 TECLVEQALARLP----EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFS 170 (276)
T ss_dssp HHHHHHHHHHHSC----SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTG
T ss_pred HHHHHHHHHHhcc----cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhh
Confidence 4556666666553 2456999999999999999999999999999999 9999988762 479999999988
Q ss_pred CCC--cccEEEee
Q 034578 78 AIP--NADAVFMK 88 (90)
Q Consensus 78 ~~p--~~D~i~l~ 88 (90)
+++ .+|+|+++
T Consensus 171 ~~~~~~fD~Iv~n 183 (276)
T 2b3t_A 171 ALAGQQFAMIVSN 183 (276)
T ss_dssp GGTTCCEEEEEEC
T ss_pred hcccCCccEEEEC
Confidence 653 39999985
No 47
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.39 E-value=6.7e-13 Score=84.34 Aligned_cols=65 Identities=17% Similarity=0.172 Sum_probs=56.0
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-----CCeeEEEecCCC-CCC--cccEEEeec
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-----EGVSHVGGDMFD-AIP--NADAVFMKV 89 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-----~rv~~~~~d~~~-~~p--~~D~i~l~~ 89 (90)
+..+|||+|||+|.++..+++..| +++++|+ |.+++.++++ .+++++.+|+.+ +++ .+|+|+++.
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 111 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFID 111 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEES
T ss_pred CCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcC
Confidence 467999999999999999999887 8999999 9999888752 789999999988 554 399999875
No 48
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.39 E-value=6.4e-13 Score=81.66 Aligned_cols=79 Identities=19% Similarity=0.322 Sum_probs=63.5
Q ss_pred hhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-------CCCeeEEEecCCCC
Q 034578 7 ITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-------HEGVSHVGGDMFDA 78 (90)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-------~~rv~~~~~d~~~~ 78 (90)
.....+++.+. ..+..+|||+|||+|.++..+++.+|..+++++|+ |.+++.+++ .+++ ++.+|..+.
T Consensus 12 ~~~~~~~~~~~---~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~ 87 (178)
T 3hm2_A 12 HVRALAISALA---PKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRA 87 (178)
T ss_dssp HHHHHHHHHHC---CCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGG
T ss_pred HHHHHHHHHhc---ccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhh
Confidence 34556666666 55677999999999999999999999999999999 999988864 1378 888998764
Q ss_pred C----CcccEEEeec
Q 034578 79 I----PNADAVFMKV 89 (90)
Q Consensus 79 ~----p~~D~i~l~~ 89 (90)
+ ..+|+|++..
T Consensus 88 ~~~~~~~~D~i~~~~ 102 (178)
T 3hm2_A 88 FDDVPDNPDVIFIGG 102 (178)
T ss_dssp GGGCCSCCSEEEECC
T ss_pred hhccCCCCCEEEECC
Confidence 3 2399999764
No 49
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.39 E-value=1.1e-12 Score=84.71 Aligned_cols=81 Identities=15% Similarity=0.270 Sum_probs=66.2
Q ss_pred chhhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC------CCeeEEEecCC
Q 034578 4 TTKITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH------EGVSHVGGDMF 76 (90)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~------~rv~~~~~d~~ 76 (90)
.+......+++.++ ..+..+|||+|||+|.++..+++..+ +++++|+ |.+++.+++. ++++++.+|+.
T Consensus 5 ~~~~~~~~~~~~~~---~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~ 79 (239)
T 1xxl_A 5 HHHHSLGLMIKTAE---CRAEHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAE 79 (239)
T ss_dssp -CHHHHHHHHHHHT---CCTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTT
T ss_pred ccCCCcchHHHHhC---cCCCCEEEEEccCcCHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccc
Confidence 45556677777777 67788999999999999999999875 8999999 9999887652 67999999997
Q ss_pred C-CCCc--ccEEEeec
Q 034578 77 D-AIPN--ADAVFMKV 89 (90)
Q Consensus 77 ~-~~p~--~D~i~l~~ 89 (90)
+ +++. +|+|++.+
T Consensus 80 ~~~~~~~~fD~v~~~~ 95 (239)
T 1xxl_A 80 SLPFPDDSFDIITCRY 95 (239)
T ss_dssp BCCSCTTCEEEEEEES
T ss_pred cCCCCCCcEEEEEECC
Confidence 6 5543 99999875
No 50
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.39 E-value=1.2e-12 Score=81.07 Aligned_cols=60 Identities=23% Similarity=0.442 Sum_probs=53.0
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCCCCC-c-ccEEEee
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTHEGVSHVGGDMFDAIP-N-ADAVFMK 88 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~~~p-~-~D~i~l~ 88 (90)
+..+|||+|||+|.++..++++. +++++|+ |.+++. ..+++++.+|+.++++ . +|+|+++
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~---~~~~~~~~~d~~~~~~~~~fD~i~~n 85 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES---HRGGNLVRADLLCSINQESVDVVVFN 85 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT---CSSSCEEECSTTTTBCGGGCSEEEEC
T ss_pred CCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc---ccCCeEEECChhhhcccCCCCEEEEC
Confidence 45699999999999999999987 9999999 999988 5679999999988665 3 9999975
No 51
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.39 E-value=1.3e-12 Score=86.79 Aligned_cols=77 Identities=14% Similarity=0.161 Sum_probs=63.7
Q ss_pred hHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-------CCCeeEEEecCCCCC
Q 034578 8 TMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-------HEGVSHVGGDMFDAI 79 (90)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-------~~rv~~~~~d~~~~~ 79 (90)
..+.+++.++ ..+..+|||||||+|.++..++++++ .+++++|+ |.+++.+++ .++++++.+|+.+.
T Consensus 60 ~~~~~~~~~~---~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~- 134 (302)
T 3hem_A 60 KRKLALDKLN---LEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF- 134 (302)
T ss_dssp HHHHHHHTTC---CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-
T ss_pred HHHHHHHHcC---CCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc-
Confidence 4456677666 56678999999999999999999987 89999999 999988875 24899999999664
Q ss_pred Cc-ccEEEeec
Q 034578 80 PN-ADAVFMKV 89 (90)
Q Consensus 80 p~-~D~i~l~~ 89 (90)
+. +|+|++..
T Consensus 135 ~~~fD~v~~~~ 145 (302)
T 3hem_A 135 DEPVDRIVSLG 145 (302)
T ss_dssp CCCCSEEEEES
T ss_pred CCCccEEEEcc
Confidence 44 99999864
No 52
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.38 E-value=4.4e-12 Score=79.96 Aligned_cols=78 Identities=24% Similarity=0.259 Sum_probs=62.6
Q ss_pred HHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC--CCeeEEEecCCCCCC-c-cc
Q 034578 9 MKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH--EGVSHVGGDMFDAIP-N-AD 83 (90)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~--~rv~~~~~d~~~~~p-~-~D 83 (90)
...+++.+.. ..+..+|||+|||+|.++..++++ ..+++++|+ +.+++.+++. .+++++.+|+.+..+ . +|
T Consensus 34 ~~~~~~~l~~--~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~~D 109 (218)
T 3ou2_A 34 APAALERLRA--GNIRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWTPDRQWD 109 (218)
T ss_dssp HHHHHHHHTT--TTSCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSCCCSSCEE
T ss_pred HHHHHHHHhc--CCCCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccCCCCCcee
Confidence 3445555552 445679999999999999999998 679999999 9999988763 689999999987543 3 99
Q ss_pred EEEeecC
Q 034578 84 AVFMKVA 90 (90)
Q Consensus 84 ~i~l~~v 90 (90)
+|++.++
T Consensus 110 ~v~~~~~ 116 (218)
T 3ou2_A 110 AVFFAHW 116 (218)
T ss_dssp EEEEESC
T ss_pred EEEEech
Confidence 9998753
No 53
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.38 E-value=1.7e-12 Score=89.62 Aligned_cols=76 Identities=18% Similarity=0.302 Sum_probs=63.8
Q ss_pred HHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC---------CCeeEEEecCCCCC
Q 034578 10 KAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH---------EGVSHVGGDMFDAI 79 (90)
Q Consensus 10 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~---------~rv~~~~~d~~~~~ 79 (90)
+.+++.++ .....+|||+|||+|.++..+++++|..+++++|+ +.+++.++++ .+++++.+|+++++
T Consensus 212 ~~ll~~l~---~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~ 288 (375)
T 4dcm_A 212 RFFMQHLP---ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV 288 (375)
T ss_dssp HHHHHTCC---CSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTC
T ss_pred HHHHHhCc---ccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccC
Confidence 45667676 34458999999999999999999999999999999 9999988762 26889999999876
Q ss_pred Cc--ccEEEee
Q 034578 80 PN--ADAVFMK 88 (90)
Q Consensus 80 p~--~D~i~l~ 88 (90)
+. ||+|+++
T Consensus 289 ~~~~fD~Ii~n 299 (375)
T 4dcm_A 289 EPFRFNAVLCN 299 (375)
T ss_dssp CTTCEEEEEEC
T ss_pred CCCCeeEEEEC
Confidence 53 9999974
No 54
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.37 E-value=1.1e-13 Score=87.01 Aligned_cols=82 Identities=20% Similarity=0.287 Sum_probs=56.4
Q ss_pred hhhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-----CCeeEEEecCCCC
Q 034578 5 TKITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-----EGVSHVGGDMFDA 78 (90)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-----~rv~~~~~d~~~~ 78 (90)
++.+.+.+++.+.. ..+..+|||+|||+|.++..+++.+|..+++++|+ |.+++.++++ .+++++.+|+.++
T Consensus 14 ~~~~~~~~~~~l~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~ 91 (215)
T 4dzr_A 14 TEVLVEEAIRFLKR--MPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEW 91 (215)
T ss_dssp HHHHHHHHHHHHTT--CCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHHH
T ss_pred HHHHHHHHHHHhhh--cCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhh
Confidence 55677778777762 25678999999999999999999999999999999 9999998863 1688999998874
Q ss_pred C-------CcccEEEee
Q 034578 79 I-------PNADAVFMK 88 (90)
Q Consensus 79 ~-------p~~D~i~l~ 88 (90)
+ ..+|+|+++
T Consensus 92 ~~~~~~~~~~fD~i~~n 108 (215)
T 4dzr_A 92 LIERAERGRPWHAIVSN 108 (215)
T ss_dssp HHHHHHTTCCBSEEEEC
T ss_pred hhhhhhccCcccEEEEC
Confidence 3 239999973
No 55
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.37 E-value=2.3e-12 Score=83.46 Aligned_cols=76 Identities=20% Similarity=0.193 Sum_probs=61.0
Q ss_pred HHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC---CCCeeEEEecCCC-CCC-c-cc
Q 034578 11 AFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT---HEGVSHVGGDMFD-AIP-N-AD 83 (90)
Q Consensus 11 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~---~~rv~~~~~d~~~-~~p-~-~D 83 (90)
.+++.++ ..+..+|||+|||+|.++..+++..+. +++++|+ +.+++.+++ ..+++++.+|+.+ +++ . +|
T Consensus 35 ~l~~~~~---~~~~~~vLD~GcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD 110 (253)
T 3g5l_A 35 ELKKMLP---DFNQKTVLDLGCGFGWHCIYAAEHGAK-KVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYN 110 (253)
T ss_dssp HHHTTCC---CCTTCEEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEE
T ss_pred HHHHhhh---ccCCCEEEEECCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeE
Confidence 3444444 345689999999999999999998664 8999999 999988865 3689999999977 554 3 99
Q ss_pred EEEeecC
Q 034578 84 AVFMKVA 90 (90)
Q Consensus 84 ~i~l~~v 90 (90)
+|++..+
T Consensus 111 ~v~~~~~ 117 (253)
T 3g5l_A 111 VVLSSLA 117 (253)
T ss_dssp EEEEESC
T ss_pred EEEEchh
Confidence 9998753
No 56
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.37 E-value=1e-12 Score=82.82 Aligned_cols=83 Identities=14% Similarity=0.147 Sum_probs=63.3
Q ss_pred hhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC------CCCeeEEEecCCCC
Q 034578 6 KITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT------HEGVSHVGGDMFDA 78 (90)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~------~~rv~~~~~d~~~~ 78 (90)
+...+.+++.+......+..+|||+|||+|.++..+++.+|..+++++|+ |.+++.+++ ..+++++.+|+.+.
T Consensus 48 ~~~~~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 127 (207)
T 1jsx_A 48 EMLVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEF 127 (207)
T ss_dssp CHHHHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTS
T ss_pred HHHHHHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhC
Confidence 34455666655410011357999999999999999999999999999999 999888765 14599999999884
Q ss_pred CC--cccEEEee
Q 034578 79 IP--NADAVFMK 88 (90)
Q Consensus 79 ~p--~~D~i~l~ 88 (90)
.+ .+|+|+++
T Consensus 128 ~~~~~~D~i~~~ 139 (207)
T 1jsx_A 128 PSEPPFDGVISR 139 (207)
T ss_dssp CCCSCEEEEECS
T ss_pred CccCCcCEEEEe
Confidence 33 39999865
No 57
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.37 E-value=3.2e-12 Score=84.84 Aligned_cols=68 Identities=26% Similarity=0.281 Sum_probs=58.6
Q ss_pred CCCCeEEEecCCchHHHHHHHHHC-CCCeEEEeeh-HHHHHhCCC--------CCCeeEEEecCCC-CC-C-------cc
Q 034578 22 NNIRSMVDVGGGTGTVLAEIVKSY-PHIKGINFDL-QHVIATAPT--------HEGVSHVGGDMFD-AI-P-------NA 82 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-p~~~~~a~~--------~~rv~~~~~d~~~-~~-p-------~~ 82 (90)
.+..+|||||||+|.++..+++++ +..+++++|+ |.+++.+++ ..+++++.+|+.+ ++ . .+
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 357899999999999999999987 8999999999 999988865 4689999999987 33 2 39
Q ss_pred cEEEeec
Q 034578 83 DAVFMKV 89 (90)
Q Consensus 83 D~i~l~~ 89 (90)
|+|++..
T Consensus 115 D~V~~~~ 121 (299)
T 3g5t_A 115 DMITAVE 121 (299)
T ss_dssp EEEEEES
T ss_pred eEEeHhh
Confidence 9999875
No 58
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.36 E-value=2.7e-12 Score=83.29 Aligned_cols=78 Identities=15% Similarity=0.239 Sum_probs=65.1
Q ss_pred hHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHH-CCCCeEEEeeh-HHHHHhCCC-------CCCeeEEEecCCCC
Q 034578 8 TMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKS-YPHIKGINFDL-QHVIATAPT-------HEGVSHVGGDMFDA 78 (90)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~-~p~~~~~~~D~-p~~~~~a~~-------~~rv~~~~~d~~~~ 78 (90)
.+..++..++ ..+..+|||+|||+|.++..+++. .|..+++++|+ |.+++.|++ .++++++.+|+.+.
T Consensus 81 ~~~~i~~~~~---~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 157 (255)
T 3mb5_A 81 DAALIVAYAG---ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG 157 (255)
T ss_dssp HHHHHHHHTT---CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC
T ss_pred HHHHHHHhhC---CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc
Confidence 3455666666 566789999999999999999999 88999999999 999988875 25699999999886
Q ss_pred CCc--ccEEEee
Q 034578 79 IPN--ADAVFMK 88 (90)
Q Consensus 79 ~p~--~D~i~l~ 88 (90)
++. +|+|++.
T Consensus 158 ~~~~~~D~v~~~ 169 (255)
T 3mb5_A 158 IEEENVDHVILD 169 (255)
T ss_dssp CCCCSEEEEEEC
T ss_pred cCCCCcCEEEEC
Confidence 654 9999874
No 59
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.36 E-value=2.6e-12 Score=81.73 Aligned_cols=66 Identities=23% Similarity=0.380 Sum_probs=57.2
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC------CCCeeEEEecCCC-C--CCc--ccEEEee
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT------HEGVSHVGGDMFD-A--IPN--ADAVFMK 88 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~------~~rv~~~~~d~~~-~--~p~--~D~i~l~ 88 (90)
+..+|||+|||+|.++..+++.+|+.+++++|+ +.+++.+++ .++++++.+|+.+ + ++. +|+|++.
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~ 118 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLN 118 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEE
Confidence 357899999999999999999999999999999 999988865 2689999999987 3 443 8999875
No 60
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.36 E-value=2.3e-12 Score=81.98 Aligned_cols=76 Identities=21% Similarity=0.278 Sum_probs=61.9
Q ss_pred hHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC------C-CeeEEEecCCCC-
Q 034578 8 TMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH------E-GVSHVGGDMFDA- 78 (90)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~------~-rv~~~~~d~~~~- 78 (90)
+...+++.++ ..+..+|||+|||+|.++..+++. ..+++++|+ |.+++.|+++ + +++++.+|+.+.
T Consensus 43 ~~~~~l~~l~---~~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~ 117 (204)
T 3njr_A 43 MRALTLAALA---PRRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAAL 117 (204)
T ss_dssp HHHHHHHHHC---CCTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGG
T ss_pred HHHHHHHhcC---CCCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhc
Confidence 3445666666 566789999999999999999998 789999999 9999888752 3 899999999873
Q ss_pred --CCcccEEEee
Q 034578 79 --IPNADAVFMK 88 (90)
Q Consensus 79 --~p~~D~i~l~ 88 (90)
.+.+|+|++.
T Consensus 118 ~~~~~~D~v~~~ 129 (204)
T 3njr_A 118 ADLPLPEAVFIG 129 (204)
T ss_dssp TTSCCCSEEEEC
T ss_pred ccCCCCCEEEEC
Confidence 3359999875
No 61
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.35 E-value=1.1e-12 Score=84.74 Aligned_cols=77 Identities=13% Similarity=0.242 Sum_probs=62.2
Q ss_pred HHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC----CCeeEEEecCCC-CCCc--
Q 034578 10 KAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH----EGVSHVGGDMFD-AIPN-- 81 (90)
Q Consensus 10 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~----~rv~~~~~d~~~-~~p~-- 81 (90)
..+++.++ ..+..+|||||||+|.++..++++. ..+++++|+ |.+++.+++. .+++++.+|+.+ +++.
T Consensus 83 ~~~l~~l~---~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~ 158 (254)
T 1xtp_A 83 RNFIASLP---GHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNT 158 (254)
T ss_dssp HHHHHTST---TCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSC
T ss_pred HHHHHhhc---ccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCC
Confidence 45666665 4567899999999999999999886 567999999 9998887652 679999999977 4442
Q ss_pred ccEEEeecC
Q 034578 82 ADAVFMKVA 90 (90)
Q Consensus 82 ~D~i~l~~v 90 (90)
+|+|++.++
T Consensus 159 fD~v~~~~~ 167 (254)
T 1xtp_A 159 YDLIVIQWT 167 (254)
T ss_dssp EEEEEEESC
T ss_pred eEEEEEcch
Confidence 999998753
No 62
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.35 E-value=1.9e-12 Score=84.15 Aligned_cols=66 Identities=14% Similarity=0.124 Sum_probs=55.5
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-------CCCeeEEEecCC----CCCC-----cccEE
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-------HEGVSHVGGDMF----DAIP-----NADAV 85 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-------~~rv~~~~~d~~----~~~p-----~~D~i 85 (90)
+..+|||+|||+|.++..+++++|..+++++|+ |.+++.|++ .++++++.+|.. ++++ .+|+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 456999999999999999999988899999999 999998875 246999999953 3444 38999
Q ss_pred Eee
Q 034578 86 FMK 88 (90)
Q Consensus 86 ~l~ 88 (90)
+++
T Consensus 145 ~~n 147 (254)
T 2h00_A 145 MCN 147 (254)
T ss_dssp EEC
T ss_pred EEC
Confidence 885
No 63
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.34 E-value=2.5e-12 Score=84.67 Aligned_cols=78 Identities=12% Similarity=0.170 Sum_probs=62.5
Q ss_pred hhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-------CCCeeEEEecCCCC
Q 034578 7 ITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-------HEGVSHVGGDMFDA 78 (90)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-------~~rv~~~~~d~~~~ 78 (90)
...+.+++.++ ..+..+|||||||+|.++..++++++ .+++++|+ |.+++.+++ .++++++.+|+.+
T Consensus 51 ~~~~~~~~~~~---~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~- 125 (287)
T 1kpg_A 51 AKIDLALGKLG---LQPGMTLLDVGCGWGATMMRAVEKYD-VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQ- 125 (287)
T ss_dssp HHHHHHHTTTT---CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGG-
T ss_pred HHHHHHHHHcC---CCCcCEEEEECCcccHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhh-
Confidence 34556677666 56678999999999999999997775 49999999 999888765 2589999999965
Q ss_pred CCc-ccEEEeec
Q 034578 79 IPN-ADAVFMKV 89 (90)
Q Consensus 79 ~p~-~D~i~l~~ 89 (90)
+|. +|+|++..
T Consensus 126 ~~~~fD~v~~~~ 137 (287)
T 1kpg_A 126 FDEPVDRIVSIG 137 (287)
T ss_dssp CCCCCSEEEEES
T ss_pred CCCCeeEEEEeC
Confidence 334 99999864
No 64
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.34 E-value=8.8e-12 Score=79.90 Aligned_cols=66 Identities=20% Similarity=0.351 Sum_probs=56.7
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC---CCeeEEEecCCC-CCCc--ccEEEeecC
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH---EGVSHVGGDMFD-AIPN--ADAVFMKVA 90 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~---~rv~~~~~d~~~-~~p~--~D~i~l~~v 90 (90)
+..+|||+|||+|.++..++++ ..+++++|+ |.+++.+++. .+++++.+|+.+ +++. +|+|++.++
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 125 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINS 125 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESC
T ss_pred CCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcCh
Confidence 4679999999999999999998 568999999 9999988763 789999999987 5543 999998753
No 65
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.34 E-value=2.3e-12 Score=81.66 Aligned_cols=76 Identities=14% Similarity=0.273 Sum_probs=61.7
Q ss_pred HHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC--CCeeEEEecCCC-CCCc-ccE
Q 034578 10 KAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH--EGVSHVGGDMFD-AIPN-ADA 84 (90)
Q Consensus 10 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~--~rv~~~~~d~~~-~~p~-~D~ 84 (90)
..+++.+. ..+..+|||+|||+|.++..++++ ..+++++|+ |.+++.+++. .+++++.+|+.+ +.+. +|+
T Consensus 35 ~~~l~~~~---~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~fD~ 109 (220)
T 3hnr_A 35 EDILEDVV---NKSFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVPTSIDT 109 (220)
T ss_dssp HHHHHHHH---HTCCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCCSCCSE
T ss_pred HHHHHHhh---ccCCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCCCCeEE
Confidence 45556555 345679999999999999999997 679999999 9999888763 489999999988 4444 999
Q ss_pred EEeecC
Q 034578 85 VFMKVA 90 (90)
Q Consensus 85 i~l~~v 90 (90)
|++.++
T Consensus 110 v~~~~~ 115 (220)
T 3hnr_A 110 IVSTYA 115 (220)
T ss_dssp EEEESC
T ss_pred EEECcc
Confidence 998753
No 66
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.34 E-value=4.3e-12 Score=78.76 Aligned_cols=65 Identities=15% Similarity=0.182 Sum_probs=53.9
Q ss_pred CCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC------CCeeEEEecCCC---CCCc-ccEEEee
Q 034578 22 NNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH------EGVSHVGGDMFD---AIPN-ADAVFMK 88 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~------~rv~~~~~d~~~---~~p~-~D~i~l~ 88 (90)
.+..+|||+|||+|.++..++++ ..+++++|+ |.+++.|+++ ++++++.+|+.. ..+. +|+|+++
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~ 96 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFN 96 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEe
Confidence 45689999999999999999998 789999999 9999988762 689999877654 2233 9999875
No 67
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.33 E-value=1.7e-12 Score=83.52 Aligned_cols=66 Identities=15% Similarity=0.262 Sum_probs=55.7
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC------CCCeeEEEecCCCC----CCc--ccEEEee
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT------HEGVSHVGGDMFDA----IPN--ADAVFMK 88 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~------~~rv~~~~~d~~~~----~p~--~D~i~l~ 88 (90)
...+|||||||+|.++..+++++|+.+++++|+ +.+++.+++ ..+++++.+|..+. ++. +|.|++.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 357899999999999999999999999999999 998888764 25799999997652 443 8988875
No 68
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.33 E-value=1.9e-12 Score=82.81 Aligned_cols=77 Identities=13% Similarity=0.240 Sum_probs=59.6
Q ss_pred HHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC--CCeeEEEecCCCCCC-c-ccE
Q 034578 10 KAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH--EGVSHVGGDMFDAIP-N-ADA 84 (90)
Q Consensus 10 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~--~rv~~~~~d~~~~~p-~-~D~ 84 (90)
+.+++.+.. ..+..+|||||||+|.++..+++..+ +++++|+ +.+++.+++. .+++++.+|+.+..+ . +|+
T Consensus 31 ~~~~~~l~~--~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~~~~~fD~ 106 (250)
T 2p7i_A 31 PFMVRAFTP--FFRPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLKDGITYIHSRFEDAQLPRRYDN 106 (250)
T ss_dssp HHHHHHHGG--GCCSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCCCSSCEEE
T ss_pred HHHHHHHHh--hcCCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcCcCCcccE
Confidence 334444432 33567899999999999999999876 6899999 9999888753 289999999977433 3 999
Q ss_pred EEeecC
Q 034578 85 VFMKVA 90 (90)
Q Consensus 85 i~l~~v 90 (90)
|++.++
T Consensus 107 v~~~~~ 112 (250)
T 2p7i_A 107 IVLTHV 112 (250)
T ss_dssp EEEESC
T ss_pred EEEhhH
Confidence 998764
No 69
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.33 E-value=1.7e-11 Score=78.83 Aligned_cols=77 Identities=13% Similarity=0.187 Sum_probs=59.9
Q ss_pred hHHHH---HhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhC----CCCCCeeEEEecCCC--
Q 034578 8 TMKAF---VSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATA----PTHEGVSHVGGDMFD-- 77 (90)
Q Consensus 8 ~~~~~---~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a----~~~~rv~~~~~d~~~-- 77 (90)
.+..+ ++.++ +.+..+|||+|||+|.++..+++.+|..+++++|+ |.+++.+ +..++++++.+|+.+
T Consensus 59 ~~~~i~~~l~~~~---~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~ 135 (230)
T 1fbn_A 59 LAAAIIKGLKVMP---IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQ 135 (230)
T ss_dssp HHHHHHTTCCCCC---CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGG
T ss_pred HHHHHHhcccccC---CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcc
Confidence 34566 44443 45678999999999999999999988889999999 8888654 335789999999976
Q ss_pred --C-CCc-ccEEEe
Q 034578 78 --A-IPN-ADAVFM 87 (90)
Q Consensus 78 --~-~p~-~D~i~l 87 (90)
. ++. +|+|+.
T Consensus 136 ~~~~~~~~~D~v~~ 149 (230)
T 1fbn_A 136 EYANIVEKVDVIYE 149 (230)
T ss_dssp GGTTTSCCEEEEEE
T ss_pred cccccCccEEEEEE
Confidence 1 223 899873
No 70
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.32 E-value=4.5e-12 Score=80.23 Aligned_cols=67 Identities=12% Similarity=0.188 Sum_probs=56.0
Q ss_pred CCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC----CCCeeEEEecCCCCCC-c-ccEEEeec
Q 034578 21 FNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT----HEGVSHVGGDMFDAIP-N-ADAVFMKV 89 (90)
Q Consensus 21 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~----~~rv~~~~~d~~~~~p-~-~D~i~l~~ 89 (90)
..+..+|||+|||+|.++..+++.. .+++++|+ +.+++.+++ .++++++.+|+.+..+ . +|+|++.+
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~ 122 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFSTAELFDLIVVAE 122 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCCCSCCEEEEEEES
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCCCCCCccEEEEcc
Confidence 4456799999999999999999985 58999999 999888765 3689999999988333 3 99999875
No 71
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.32 E-value=1.4e-12 Score=84.20 Aligned_cols=67 Identities=16% Similarity=0.357 Sum_probs=57.8
Q ss_pred CCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-------CCCeeEEEecCCCCCC----c-ccEEEee
Q 034578 22 NNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-------HEGVSHVGGDMFDAIP----N-ADAVFMK 88 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-------~~rv~~~~~d~~~~~p----~-~D~i~l~ 88 (90)
.+..+|||+|||+|..+..+++..|..+++++|+ |.+++.|++ .++++++.+|+.+.++ . ||+|++.
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~ 149 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFID 149 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEc
Confidence 3568999999999999999999889999999999 999988875 2589999999987433 3 9999875
No 72
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.32 E-value=1.2e-11 Score=79.12 Aligned_cols=80 Identities=8% Similarity=0.068 Sum_probs=58.7
Q ss_pred hHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHH----HhCCCCCCeeEEEecCCCC----
Q 034578 8 TMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVI----ATAPTHEGVSHVGGDMFDA---- 78 (90)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~----~~a~~~~rv~~~~~d~~~~---- 78 (90)
+...+++.+. ....+..+|||+|||+|.++..+++..+..+++++|+ |.++ +.+++..++.++.+|..++
T Consensus 43 l~~~~~~~l~-~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~ 121 (210)
T 1nt2_A 43 LAAMILKGHR-LKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYS 121 (210)
T ss_dssp HHHHHHTSCC-CCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTT
T ss_pred HHHHHHhhcc-cCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhc
Confidence 3444444432 0145667999999999999999999988789999999 8754 4444456789999988762
Q ss_pred -CCc-ccEEEee
Q 034578 79 -IPN-ADAVFMK 88 (90)
Q Consensus 79 -~p~-~D~i~l~ 88 (90)
+++ +|+|++.
T Consensus 122 ~~~~~fD~V~~~ 133 (210)
T 1nt2_A 122 GIVEKVDLIYQD 133 (210)
T ss_dssp TTCCCEEEEEEC
T ss_pred ccccceeEEEEe
Confidence 233 8999864
No 73
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.32 E-value=1.6e-12 Score=85.01 Aligned_cols=81 Identities=15% Similarity=0.207 Sum_probs=62.9
Q ss_pred hhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHC-CCCeEEEeeh-HH------HHHhCCCC-------CCeeE
Q 034578 6 KITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSY-PHIKGINFDL-QH------VIATAPTH-------EGVSH 70 (90)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-p~------~~~~a~~~-------~rv~~ 70 (90)
......+++.++ ..+..+|||||||+|.++..+++++ |+.+++++|+ +. +++.++++ +++++
T Consensus 29 ~~~~~~l~~~~~---~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~ 105 (275)
T 3bkx_A 29 TAHRLAIAEAWQ---VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTV 105 (275)
T ss_dssp HHHHHHHHHHHT---CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEE
T ss_pred HHHHHHHHHHcC---CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEE
Confidence 344566677766 5667899999999999999999996 8899999999 65 77776541 58999
Q ss_pred EEec-CCC---CCC-c-ccEEEeec
Q 034578 71 VGGD-MFD---AIP-N-ADAVFMKV 89 (90)
Q Consensus 71 ~~~d-~~~---~~p-~-~D~i~l~~ 89 (90)
..+| +.. +++ . +|+|++..
T Consensus 106 ~~~d~~~~~~~~~~~~~fD~v~~~~ 130 (275)
T 3bkx_A 106 HFNTNLSDDLGPIADQHFDRVVLAH 130 (275)
T ss_dssp ECSCCTTTCCGGGTTCCCSEEEEES
T ss_pred EECChhhhccCCCCCCCEEEEEEcc
Confidence 9998 543 233 2 99999865
No 74
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.31 E-value=1.1e-11 Score=78.76 Aligned_cols=73 Identities=12% Similarity=0.112 Sum_probs=55.8
Q ss_pred HHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHh----CCC------CCCeeEEEecCCC-C
Q 034578 11 AFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIAT----APT------HEGVSHVGGDMFD-A 78 (90)
Q Consensus 11 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~----a~~------~~rv~~~~~d~~~-~ 78 (90)
..++.+. ..+..+|||+|||+|.++..+++++|..+++++|+ +.+++. +++ .++++++.+|+.+ +
T Consensus 18 ~~~~~l~---~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~ 94 (218)
T 3mq2_A 18 AEFEQLR---SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLP 94 (218)
T ss_dssp HHHHHHH---TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCC
T ss_pred HHHHHhh---ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCC
Confidence 3444454 45678999999999999999999999999999999 886654 332 2589999999987 4
Q ss_pred CCc-ccEEE
Q 034578 79 IPN-ADAVF 86 (90)
Q Consensus 79 ~p~-~D~i~ 86 (90)
++. .|.+.
T Consensus 95 ~~~~~d~v~ 103 (218)
T 3mq2_A 95 PLSGVGELH 103 (218)
T ss_dssp SCCCEEEEE
T ss_pred CCCCCCEEE
Confidence 432 25554
No 75
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.31 E-value=4.1e-12 Score=83.79 Aligned_cols=74 Identities=18% Similarity=0.178 Sum_probs=59.0
Q ss_pred HHHhhcccCCCCCCCeEEEecCCchHHHHHHHHH-CCCCeEEEeeh-HHHHHhCCC----C---CCeeEEEecCCCCCCc
Q 034578 11 AFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKS-YPHIKGINFDL-QHVIATAPT----H---EGVSHVGGDMFDAIPN 81 (90)
Q Consensus 11 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~-~p~~~~~~~D~-p~~~~~a~~----~---~rv~~~~~d~~~~~p~ 81 (90)
.+++.++ +.+..+|||+|||+|.++..+++. .|..+++++|+ |.+++.+++ . ++++++.+|+.++++.
T Consensus 101 ~~~~~~~---~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~ 177 (275)
T 1yb2_A 101 YIIMRCG---LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISD 177 (275)
T ss_dssp -----CC---CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCS
T ss_pred HHHHHcC---CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCcC
Confidence 4445555 556789999999999999999998 78999999999 999887764 2 5799999999886653
Q ss_pred --ccEEEe
Q 034578 82 --ADAVFM 87 (90)
Q Consensus 82 --~D~i~l 87 (90)
+|+|++
T Consensus 178 ~~fD~Vi~ 185 (275)
T 1yb2_A 178 QMYDAVIA 185 (275)
T ss_dssp CCEEEEEE
T ss_pred CCccEEEE
Confidence 999987
No 76
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.31 E-value=4.8e-12 Score=81.55 Aligned_cols=78 Identities=21% Similarity=0.373 Sum_probs=61.5
Q ss_pred hhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCC---CCCc-
Q 034578 7 ITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTHEGVSHVGGDMFD---AIPN- 81 (90)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~---~~p~- 81 (90)
.+.+.+...++. +.+..+|||||||+|.++..+++. +.+++++|+ +.+++.+++. ++++.+|+.+ +++.
T Consensus 27 ~~~~~~~~~l~~--~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~--~~~~~~d~~~~~~~~~~~ 100 (240)
T 3dli_A 27 LVKARLRRYIPY--FKGCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGK--FNVVKSDAIEYLKSLPDK 100 (240)
T ss_dssp HHHHHHGGGGGG--TTTCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT--SEEECSCHHHHHHTSCTT
T ss_pred HHHHHHHHHHhh--hcCCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh--cceeeccHHHHhhhcCCC
Confidence 344555555553 556689999999999999999998 557899999 9999988866 8899998876 4443
Q ss_pred -ccEEEeecC
Q 034578 82 -ADAVFMKVA 90 (90)
Q Consensus 82 -~D~i~l~~v 90 (90)
+|+|++.++
T Consensus 101 ~fD~i~~~~~ 110 (240)
T 3dli_A 101 YLDGVMISHF 110 (240)
T ss_dssp CBSEEEEESC
T ss_pred CeeEEEECCc
Confidence 999998753
No 77
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.31 E-value=3.1e-12 Score=85.50 Aligned_cols=79 Identities=14% Similarity=0.188 Sum_probs=63.5
Q ss_pred hhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-------CCeeEEEecCCC
Q 034578 6 KITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-------EGVSHVGGDMFD 77 (90)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-------~rv~~~~~d~~~ 77 (90)
....+.+++.++ ..+..+|||+|||+|.++..+++++ +.+++++|+ |.+++.+++. ++++++.+|+.+
T Consensus 76 ~~~~~~~~~~~~---~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 151 (318)
T 2fk8_A 76 YAKVDLNLDKLD---LKPGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWED 151 (318)
T ss_dssp HHHHHHHHTTSC---CCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGG
T ss_pred HHHHHHHHHhcC---CCCcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHH
Confidence 344566677666 5567899999999999999999987 569999999 9998887652 579999999865
Q ss_pred CCCc-ccEEEeec
Q 034578 78 AIPN-ADAVFMKV 89 (90)
Q Consensus 78 ~~p~-~D~i~l~~ 89 (90)
+|. +|+|++..
T Consensus 152 -~~~~fD~v~~~~ 163 (318)
T 2fk8_A 152 -FAEPVDRIVSIE 163 (318)
T ss_dssp -CCCCCSEEEEES
T ss_pred -CCCCcCEEEEeC
Confidence 344 99999864
No 78
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.31 E-value=2.9e-12 Score=81.91 Aligned_cols=67 Identities=16% Similarity=0.128 Sum_probs=55.1
Q ss_pred CCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-------CCeeEEEecCCC-CCCc-ccEEEeecC
Q 034578 22 NNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-------EGVSHVGGDMFD-AIPN-ADAVFMKVA 90 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-------~rv~~~~~d~~~-~~p~-~D~i~l~~v 90 (90)
..+.+|||+|||+|.++..++...|+++++++|+ +.|++.++++ .++++ .|..+ ..+. ||+|++.++
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~~~~DvVLa~k~ 124 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYKGTYDVVFLLKM 124 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTTSEEEEEEEETC
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCCCCcChhhHhhH
Confidence 3578999999999999999999999999999999 9999988762 24555 77765 3444 999998653
No 79
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.31 E-value=5.3e-12 Score=86.90 Aligned_cols=68 Identities=24% Similarity=0.314 Sum_probs=58.5
Q ss_pred CCCeEEEecCCchHHHHHHHHHC-CCCeEEEeeh-HHHHHhCCCC--------------CCeeEEEecCCC-------CC
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSY-PHIKGINFDL-QHVIATAPTH--------------EGVSHVGGDMFD-------AI 79 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-p~~~~~a~~~--------------~rv~~~~~d~~~-------~~ 79 (90)
+..+|||+|||+|.++..+++.+ |..+++++|+ |.+++.++++ ++++++.+|+.+ ++
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 45799999999999999999987 8899999999 9999988753 689999999987 44
Q ss_pred Cc--ccEEEeecC
Q 034578 80 PN--ADAVFMKVA 90 (90)
Q Consensus 80 p~--~D~i~l~~v 90 (90)
+. +|+|+++.+
T Consensus 163 ~~~~fD~V~~~~~ 175 (383)
T 4fsd_A 163 PDSSVDIVISNCV 175 (383)
T ss_dssp CTTCEEEEEEESC
T ss_pred CCCCEEEEEEccc
Confidence 43 999998753
No 80
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.30 E-value=2.6e-12 Score=84.21 Aligned_cols=68 Identities=15% Similarity=0.134 Sum_probs=57.7
Q ss_pred CCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC------CCeeEEEecCCC-CC-----CcccEEEee
Q 034578 22 NNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH------EGVSHVGGDMFD-AI-----PNADAVFMK 88 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~------~rv~~~~~d~~~-~~-----p~~D~i~l~ 88 (90)
.+..+|||||||+|.++..++..+|+.+++++|+ +.+++.++++ .+++++.+|+.+ +. ..||+|+.+
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 3567999999999999999999999999999999 9999888752 469999999876 32 239999986
Q ss_pred c
Q 034578 89 V 89 (90)
Q Consensus 89 ~ 89 (90)
.
T Consensus 159 a 159 (249)
T 3g89_A 159 A 159 (249)
T ss_dssp S
T ss_pred C
Confidence 4
No 81
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.30 E-value=6e-12 Score=81.09 Aligned_cols=68 Identities=19% Similarity=0.299 Sum_probs=56.1
Q ss_pred CCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC---CCCeeEEEecCCC-CCCc-------ccEEEee
Q 034578 21 FNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT---HEGVSHVGGDMFD-AIPN-------ADAVFMK 88 (90)
Q Consensus 21 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~---~~rv~~~~~d~~~-~~p~-------~D~i~l~ 88 (90)
..+..+|||+|||+|.++..+++..+ +++++|+ |.+++.+++ ..+++++.+|+.+ +.+. +|+|+++
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~ 131 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMR 131 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEc
Confidence 44567899999999999999999987 7999999 999988865 3589999999988 3221 7899887
Q ss_pred cC
Q 034578 89 VA 90 (90)
Q Consensus 89 ~v 90 (90)
.+
T Consensus 132 ~~ 133 (245)
T 3ggd_A 132 TG 133 (245)
T ss_dssp SS
T ss_pred ch
Confidence 53
No 82
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.30 E-value=5.4e-12 Score=84.09 Aligned_cols=78 Identities=15% Similarity=0.342 Sum_probs=64.6
Q ss_pred hhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-------CCeeEEEecCCC
Q 034578 6 KITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-------EGVSHVGGDMFD 77 (90)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-------~rv~~~~~d~~~ 77 (90)
..+++.+++.++ ..+..+|||+|||+|.++..++++. .+++++|+ +.+++.++++ ++++++.+|+.+
T Consensus 14 ~~i~~~i~~~~~---~~~~~~VLDiG~G~G~lt~~L~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~ 88 (285)
T 1zq9_A 14 PLIINSIIDKAA---LRPTDVVLEVGPGTGNMTVKLLEKA--KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLK 88 (285)
T ss_dssp HHHHHHHHHHTC---CCTTCEEEEECCTTSTTHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTT
T ss_pred HHHHHHHHHhcC---CCCCCEEEEEcCcccHHHHHHHhhC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceec
Confidence 446777888777 5667899999999999999999984 58999999 9998877641 579999999988
Q ss_pred -CCCcccEEEee
Q 034578 78 -AIPNADAVFMK 88 (90)
Q Consensus 78 -~~p~~D~i~l~ 88 (90)
+++.+|+|+.+
T Consensus 89 ~~~~~fD~vv~n 100 (285)
T 1zq9_A 89 TDLPFFDTCVAN 100 (285)
T ss_dssp SCCCCCSEEEEE
T ss_pred ccchhhcEEEEe
Confidence 67779998874
No 83
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.30 E-value=9.7e-12 Score=78.50 Aligned_cols=79 Identities=14% Similarity=0.162 Sum_probs=63.9
Q ss_pred hhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC------CCCeeEEEecCCCC
Q 034578 6 KITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT------HEGVSHVGGDMFDA 78 (90)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~------~~rv~~~~~d~~~~ 78 (90)
......+++.+. ..+..+|||+|||+|.++..+++. ..+++++|+ |.+++.+++ ..+++++.+|+.+.
T Consensus 63 ~~~~~~~~~~l~---~~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 137 (210)
T 3lbf_A 63 PYMVARMTELLE---LTPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQG 137 (210)
T ss_dssp HHHHHHHHHHTT---CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC
T ss_pred HHHHHHHHHhcC---CCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccC
Confidence 344566677666 567789999999999999999998 688999999 999988875 25799999999874
Q ss_pred CC---cccEEEeec
Q 034578 79 IP---NADAVFMKV 89 (90)
Q Consensus 79 ~p---~~D~i~l~~ 89 (90)
.+ .||+|++..
T Consensus 138 ~~~~~~~D~i~~~~ 151 (210)
T 3lbf_A 138 WQARAPFDAIIVTA 151 (210)
T ss_dssp CGGGCCEEEEEESS
T ss_pred CccCCCccEEEEcc
Confidence 32 399999853
No 84
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.30 E-value=1.1e-11 Score=80.25 Aligned_cols=77 Identities=18% Similarity=0.236 Sum_probs=63.9
Q ss_pred HHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHH-CCCCeEEEeeh-HHHHHhCCCC-------CCeeEEEecCCCC-
Q 034578 9 MKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKS-YPHIKGINFDL-QHVIATAPTH-------EGVSHVGGDMFDA- 78 (90)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~-~p~~~~~~~D~-p~~~~~a~~~-------~rv~~~~~d~~~~- 78 (90)
+..+++.++ ..+..+|||+|||+|.++..+++. .|..+++++|+ |.+++.++++ +++++..+|+.+.
T Consensus 85 ~~~~~~~~~---~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~ 161 (258)
T 2pwy_A 85 ASAMVTLLD---LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAE 161 (258)
T ss_dssp HHHHHHHTT---CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCC
T ss_pred HHHHHHHcC---CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcC
Confidence 345666666 566789999999999999999999 78899999999 9998887652 6899999999874
Q ss_pred CCc--ccEEEee
Q 034578 79 IPN--ADAVFMK 88 (90)
Q Consensus 79 ~p~--~D~i~l~ 88 (90)
++. +|+|++.
T Consensus 162 ~~~~~~D~v~~~ 173 (258)
T 2pwy_A 162 LEEAAYDGVALD 173 (258)
T ss_dssp CCTTCEEEEEEE
T ss_pred CCCCCcCEEEEC
Confidence 653 9999874
No 85
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.30 E-value=1.2e-11 Score=77.03 Aligned_cols=75 Identities=15% Similarity=0.133 Sum_probs=60.2
Q ss_pred HHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC------CCeeEEEecCCC-CCCc
Q 034578 10 KAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH------EGVSHVGGDMFD-AIPN 81 (90)
Q Consensus 10 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~------~rv~~~~~d~~~-~~p~ 81 (90)
+.+++.++ ..+..+|||+|||+|.++..+++. ..+++++|+ |.+++.+++. ++++++.+|+.+ +.+.
T Consensus 22 ~~l~~~~~---~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~ 96 (199)
T 2xvm_A 22 SEVLEAVK---VVKPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDR 96 (199)
T ss_dssp HHHHHHTT---TSCSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCCCC
T ss_pred HHHHHHhh---ccCCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCCCC
Confidence 34555565 445679999999999999999987 579999999 9999887652 479999999987 4444
Q ss_pred -ccEEEeec
Q 034578 82 -ADAVFMKV 89 (90)
Q Consensus 82 -~D~i~l~~ 89 (90)
+|+|++..
T Consensus 97 ~~D~v~~~~ 105 (199)
T 2xvm_A 97 QYDFILSTV 105 (199)
T ss_dssp CEEEEEEES
T ss_pred CceEEEEcc
Confidence 99999875
No 86
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.30 E-value=5.4e-12 Score=81.69 Aligned_cols=67 Identities=16% Similarity=0.263 Sum_probs=56.3
Q ss_pred CCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-----CCCeeEEEecCCC-CCCc--ccEEEeec
Q 034578 21 FNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-----HEGVSHVGGDMFD-AIPN--ADAVFMKV 89 (90)
Q Consensus 21 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-----~~rv~~~~~d~~~-~~p~--~D~i~l~~ 89 (90)
..+..+|||+|||+|.++..++++ ..+++++|+ +.+++.+++ .++++++.+|+.+ +++. +|+|++.+
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 112 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVH 112 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEES
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECC
Confidence 456789999999999999999987 578999999 999888764 3689999999977 4443 99999875
No 87
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.30 E-value=1.1e-11 Score=87.98 Aligned_cols=79 Identities=14% Similarity=0.179 Sum_probs=62.6
Q ss_pred hhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCC-------CCCeeEEEecCCC-C
Q 034578 7 ITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPT-------HEGVSHVGGDMFD-A 78 (90)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~-------~~rv~~~~~d~~~-~ 78 (90)
...+.+++.+. ..+..+|||||||+|.++..+++ .+..+++++|+.++++.|++ .++++++.+|+.+ +
T Consensus 145 ~~~~~il~~l~---~~~~~~VLDiGcGtG~la~~la~-~~~~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~ 220 (480)
T 3b3j_A 145 TYQRAILQNHT---DFKDKIVLDVGCGSGILSFFAAQ-AGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVS 220 (480)
T ss_dssp HHHHHHHHTGG---GTTTCEEEEESCSTTHHHHHHHH-TTCSEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCC
T ss_pred HHHHHHHHhhh---hcCCCEEEEecCcccHHHHHHHH-cCCCEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCc
Confidence 34566777666 44567999999999999998887 57789999999338777764 2689999999988 6
Q ss_pred CCc-ccEEEeec
Q 034578 79 IPN-ADAVFMKV 89 (90)
Q Consensus 79 ~p~-~D~i~l~~ 89 (90)
+|+ +|+|+...
T Consensus 221 ~~~~fD~Ivs~~ 232 (480)
T 3b3j_A 221 LPEQVDIIISEP 232 (480)
T ss_dssp CSSCEEEEECCC
T ss_pred cCCCeEEEEEeC
Confidence 665 99999753
No 88
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.30 E-value=5.6e-12 Score=79.86 Aligned_cols=80 Identities=11% Similarity=0.103 Sum_probs=64.5
Q ss_pred hhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHC-CCCeEEEeeh-HHHHHhCCCC------CCeeEEEecCCCC
Q 034578 7 ITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSY-PHIKGINFDL-QHVIATAPTH------EGVSHVGGDMFDA 78 (90)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-p~~~~~a~~~------~rv~~~~~d~~~~ 78 (90)
.....+++.+. ..+..+|||+|||+|.++..+++.. |..+++++|+ |.+++.++++ +++++..+|+.+.
T Consensus 64 ~~~~~~~~~~~---~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 140 (215)
T 2yxe_A 64 HMVGMMCELLD---LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLG 140 (215)
T ss_dssp HHHHHHHHHTT---CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGC
T ss_pred HHHHHHHHhhC---CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccC
Confidence 34456666665 5567899999999999999999997 7789999999 9999888752 5799999998765
Q ss_pred CC---cccEEEeec
Q 034578 79 IP---NADAVFMKV 89 (90)
Q Consensus 79 ~p---~~D~i~l~~ 89 (90)
++ .+|+|++..
T Consensus 141 ~~~~~~fD~v~~~~ 154 (215)
T 2yxe_A 141 YEPLAPYDRIYTTA 154 (215)
T ss_dssp CGGGCCEEEEEESS
T ss_pred CCCCCCeeEEEECC
Confidence 54 399999764
No 89
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.30 E-value=7.5e-12 Score=81.50 Aligned_cols=65 Identities=26% Similarity=0.313 Sum_probs=55.7
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-CCCeeEEEecCCC-CCCc-ccEEEeec
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-HEGVSHVGGDMFD-AIPN-ADAVFMKV 89 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-~~rv~~~~~d~~~-~~p~-~D~i~l~~ 89 (90)
+..+|||+|||+|.++..++++. .+++++|+ |.+++.+++ ..+++++.+|+.+ +.+. +|+|++..
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~ 118 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSF--GTVEGLELSADMLAIARRRNPDAVLHHGDMRDFSLGRRFSAVTCMF 118 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTS--SEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCCSCCEEEEEECT
T ss_pred CCCcEEEeCCcCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhCCCCEEEECChHHCCccCCcCEEEEcC
Confidence 45899999999999999999985 47999999 999998876 4689999999988 4444 99999864
No 90
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.29 E-value=3.4e-12 Score=84.75 Aligned_cols=76 Identities=16% Similarity=0.235 Sum_probs=60.7
Q ss_pred hhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC---------CCeeEEEecCC
Q 034578 7 ITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH---------EGVSHVGGDMF 76 (90)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~---------~rv~~~~~d~~ 76 (90)
.....+++.++ . ...+|||||||+|.++..++++ ..+++++|+ |.+++.++++ .+++++.+|+.
T Consensus 70 ~~~~~~~~~~~---~-~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~ 143 (299)
T 3g2m_A 70 SEAREFATRTG---P-VSGPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMS 143 (299)
T ss_dssp HHHHHHHHHHC---C-CCSCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTT
T ss_pred HHHHHHHHhhC---C-CCCcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchh
Confidence 34556666665 2 3459999999999999999998 578999999 9999988752 67999999998
Q ss_pred C-CCCc-ccEEEee
Q 034578 77 D-AIPN-ADAVFMK 88 (90)
Q Consensus 77 ~-~~p~-~D~i~l~ 88 (90)
+ +++. +|+|++.
T Consensus 144 ~~~~~~~fD~v~~~ 157 (299)
T 3g2m_A 144 AFALDKRFGTVVIS 157 (299)
T ss_dssp BCCCSCCEEEEEEC
T ss_pred cCCcCCCcCEEEEC
Confidence 8 4554 9998864
No 91
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.29 E-value=8.9e-12 Score=81.87 Aligned_cols=68 Identities=15% Similarity=0.219 Sum_probs=57.3
Q ss_pred CCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC----------CCeeEEEecCCCC--------CC-
Q 034578 21 FNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH----------EGVSHVGGDMFDA--------IP- 80 (90)
Q Consensus 21 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~----------~rv~~~~~d~~~~--------~p- 80 (90)
..+..+|||+|||+|.++..+++++|..+++++|+ |.+++.|+++ +|++++.+|+.+. ++
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCT
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCC
Confidence 44567999999999999999999999999999999 9988877541 3699999999874 23
Q ss_pred c-ccEEEee
Q 034578 81 N-ADAVFMK 88 (90)
Q Consensus 81 ~-~D~i~l~ 88 (90)
. ||+|+++
T Consensus 114 ~~fD~Vv~n 122 (260)
T 2ozv_A 114 EHFHHVIMN 122 (260)
T ss_dssp TCEEEEEEC
T ss_pred CCcCEEEEC
Confidence 3 9999985
No 92
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.29 E-value=1.5e-11 Score=78.83 Aligned_cols=76 Identities=11% Similarity=0.116 Sum_probs=60.0
Q ss_pred hhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-CCCeeEEEecCCC--CCC--
Q 034578 7 ITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-HEGVSHVGGDMFD--AIP-- 80 (90)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-~~rv~~~~~d~~~--~~p-- 80 (90)
.+.+.++..+. .+..+|||+|||+|.++..+++. ..+++++|+ |.+++.+++ .++++++.+|+.+ +++
T Consensus 36 ~l~~~~~~~~~----~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~ 109 (226)
T 3m33_A 36 LTFDLWLSRLL----TPQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLG 109 (226)
T ss_dssp HHHHHHHHHHC----CTTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCC
T ss_pred HHHHHHHHhcC----CCCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCC
Confidence 34444544332 34679999999999999999998 579999999 999998876 4789999999976 333
Q ss_pred -cccEEEee
Q 034578 81 -NADAVFMK 88 (90)
Q Consensus 81 -~~D~i~l~ 88 (90)
.+|+|+.+
T Consensus 110 ~~fD~v~~~ 118 (226)
T 3m33_A 110 APFGLIVSR 118 (226)
T ss_dssp CCEEEEEEE
T ss_pred CCEEEEEeC
Confidence 29999874
No 93
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.29 E-value=5e-12 Score=80.82 Aligned_cols=66 Identities=24% Similarity=0.387 Sum_probs=55.9
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC------CCCeeEEEecCCC-C--CCc--ccEEEee
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT------HEGVSHVGGDMFD-A--IPN--ADAVFMK 88 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~------~~rv~~~~~d~~~-~--~p~--~D~i~l~ 88 (90)
...+|||||||+|.++..+++.+|+.+++++|+ +.+++.|++ ..+++++.+|+.+ + ++. +|.|++.
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~ 115 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLN 115 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEE
Confidence 356899999999999999999999999999999 999988765 2579999999876 2 443 8988764
No 94
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.29 E-value=1.3e-11 Score=81.93 Aligned_cols=68 Identities=16% Similarity=0.270 Sum_probs=57.1
Q ss_pred CCCeEEEecCCc---hHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC----CCCeeEEEecCCCC------------C--C
Q 034578 23 NIRSMVDVGGGT---GTVLAEIVKSYPHIKGINFDL-QHVIATAPT----HEGVSHVGGDMFDA------------I--P 80 (90)
Q Consensus 23 ~~~~vlDvG~G~---G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~----~~rv~~~~~d~~~~------------~--p 80 (90)
+..+|||||||+ |.++..+.+.+|+.+++++|+ |.|++.+++ .++++++.+|+.+. + .
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~ 156 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFS 156 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTT
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCC
Confidence 457999999999 999888888899999999999 999998875 37899999999762 2 2
Q ss_pred cccEEEeecC
Q 034578 81 NADAVFMKVA 90 (90)
Q Consensus 81 ~~D~i~l~~v 90 (90)
.+|+|++..+
T Consensus 157 ~~d~v~~~~v 166 (274)
T 2qe6_A 157 RPAAIMLVGM 166 (274)
T ss_dssp SCCEEEETTT
T ss_pred CCEEEEEech
Confidence 4899987653
No 95
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.29 E-value=1.9e-11 Score=75.51 Aligned_cols=78 Identities=14% Similarity=0.264 Sum_probs=63.6
Q ss_pred hhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC------C--CeeEEEecCCC
Q 034578 7 ITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH------E--GVSHVGGDMFD 77 (90)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~------~--rv~~~~~d~~~ 77 (90)
...+.+++.+. ..+..+|||+|||+|.++..+++. ..+++++|+ |.+++.++++ . |++++.+|+.+
T Consensus 39 ~~~~~l~~~~~---~~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~ 113 (194)
T 1dus_A 39 KGTKILVENVV---VDKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE 113 (194)
T ss_dssp HHHHHHHHHCC---CCTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT
T ss_pred hHHHHHHHHcc---cCCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc
Confidence 45667777776 556789999999999999999998 789999999 9998887651 3 49999999988
Q ss_pred CCC--cccEEEeec
Q 034578 78 AIP--NADAVFMKV 89 (90)
Q Consensus 78 ~~p--~~D~i~l~~ 89 (90)
..+ .+|+|+++.
T Consensus 114 ~~~~~~~D~v~~~~ 127 (194)
T 1dus_A 114 NVKDRKYNKIITNP 127 (194)
T ss_dssp TCTTSCEEEEEECC
T ss_pred ccccCCceEEEECC
Confidence 554 399999753
No 96
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.28 E-value=4e-12 Score=82.24 Aligned_cols=68 Identities=21% Similarity=0.259 Sum_probs=56.9
Q ss_pred CCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC------CCCeeEEEecCCC-CC----Cc-ccEEEee
Q 034578 22 NNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT------HEGVSHVGGDMFD-AI----PN-ADAVFMK 88 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~------~~rv~~~~~d~~~-~~----p~-~D~i~l~ 88 (90)
.+..+|||+|||+|.++..+++..|..+++++|+ +.+++.+++ ..+++++.+|+.+ +. +. ||+|++.
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 3567999999999999999999999999999999 999988865 2479999999866 32 23 9999975
Q ss_pred c
Q 034578 89 V 89 (90)
Q Consensus 89 ~ 89 (90)
.
T Consensus 149 ~ 149 (240)
T 1xdz_A 149 A 149 (240)
T ss_dssp C
T ss_pred c
Confidence 4
No 97
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.28 E-value=5e-12 Score=85.91 Aligned_cols=78 Identities=14% Similarity=0.242 Sum_probs=63.3
Q ss_pred HHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-----CCCeeEEEecCCCCCCc-
Q 034578 9 MKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-----HEGVSHVGGDMFDAIPN- 81 (90)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-----~~rv~~~~~d~~~~~p~- 81 (90)
.+.+++.++ .....+|||+|||+|.++..+++.+|+.+++++|+ +.+++.+++ ..+.+++.+|+++..+.
T Consensus 185 ~~~ll~~l~---~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~~~ 261 (343)
T 2pjd_A 185 SQLLLSTLT---PHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKGR 261 (343)
T ss_dssp HHHHHHHSC---TTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTCCSC
T ss_pred HHHHHHhcC---cCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccccCC
Confidence 566677775 33457899999999999999999999999999999 999988875 23467889999875444
Q ss_pred ccEEEeec
Q 034578 82 ADAVFMKV 89 (90)
Q Consensus 82 ~D~i~l~~ 89 (90)
+|+|+++.
T Consensus 262 fD~Iv~~~ 269 (343)
T 2pjd_A 262 FDMIISNP 269 (343)
T ss_dssp EEEEEECC
T ss_pred eeEEEECC
Confidence 99999863
No 98
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.28 E-value=2.8e-11 Score=76.23 Aligned_cols=66 Identities=14% Similarity=0.231 Sum_probs=55.1
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC------CCeeEEEecCCCCCCc-ccEEEeec
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH------EGVSHVGGDMFDAIPN-ADAVFMKV 89 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~------~rv~~~~~d~~~~~p~-~D~i~l~~ 89 (90)
+..+|||+|||+|.++..+++ .+..+++++|+ |.+++.++++ .+++++.+|+.+..+. +|+|+++.
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~fD~i~~~~ 133 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHK-LGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDGKFDLIVANI 133 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCCSCEEEEEEES
T ss_pred CCCEEEEECCCCCHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCCCCceEEEECC
Confidence 467999999999999999876 57789999999 9999888752 3499999999885554 99999764
No 99
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.28 E-value=6.7e-12 Score=80.88 Aligned_cols=80 Identities=15% Similarity=0.189 Sum_probs=64.4
Q ss_pred hhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC------CCeeEEEecCCCC
Q 034578 6 KITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH------EGVSHVGGDMFDA 78 (90)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~------~rv~~~~~d~~~~ 78 (90)
......+++.++ ..+..+|||+|||+|.++..+++..+ .+++++|+ |.+++.++++ .++++..+|+..+
T Consensus 77 ~~~~~~~~~~l~---~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 152 (235)
T 1jg1_A 77 PHMVAIMLEIAN---LKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKG 152 (235)
T ss_dssp HHHHHHHHHHHT---CCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC
T ss_pred HHHHHHHHHhcC---CCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccC
Confidence 345666777666 55678999999999999999999988 89999998 9998888752 4699999998555
Q ss_pred CCc---ccEEEeec
Q 034578 79 IPN---ADAVFMKV 89 (90)
Q Consensus 79 ~p~---~D~i~l~~ 89 (90)
++. +|+|++..
T Consensus 153 ~~~~~~fD~Ii~~~ 166 (235)
T 1jg1_A 153 FPPKAPYDVIIVTA 166 (235)
T ss_dssp CGGGCCEEEEEECS
T ss_pred CCCCCCccEEEECC
Confidence 542 89998753
No 100
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.27 E-value=1.5e-11 Score=79.39 Aligned_cols=65 Identities=26% Similarity=0.438 Sum_probs=54.6
Q ss_pred CCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-----CCCeeEEEecCCC-CCCc-ccEEEee
Q 034578 22 NNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-----HEGVSHVGGDMFD-AIPN-ADAVFMK 88 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-----~~rv~~~~~d~~~-~~p~-~D~i~l~ 88 (90)
.+..+|||+|||+|.++..+++. +.+++++|+ |.+++.+++ ..+++++.+|+.+ +.+. +|+|++.
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~ 112 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNEFDAVTMF 112 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCCSCEEEEEEC
T ss_pred cCCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccCCCccEEEEc
Confidence 45679999999999999999987 578999999 999988875 2479999999987 4454 9999863
No 101
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.27 E-value=3.2e-12 Score=78.84 Aligned_cols=81 Identities=15% Similarity=0.146 Sum_probs=61.6
Q ss_pred hhhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-------CCeeEEEecCC
Q 034578 5 TKITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-------EGVSHVGGDMF 76 (90)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-------~rv~~~~~d~~ 76 (90)
+..+.+.+++.+.. ..+..+|||+|||+|.++..++++ +..+++++|+ +.+++.++++ ++++++.+|+.
T Consensus 15 ~~~~~~~~~~~l~~--~~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 91 (177)
T 2esr_A 15 SDKVRGAIFNMIGP--YFNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAE 91 (177)
T ss_dssp ---CHHHHHHHHCS--CCCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHH
T ss_pred HHHHHHHHHHHHHh--hcCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHH
Confidence 34455666666652 345679999999999999999987 6679999999 9999888651 47999999987
Q ss_pred CC---CCc-ccEEEee
Q 034578 77 DA---IPN-ADAVFMK 88 (90)
Q Consensus 77 ~~---~p~-~D~i~l~ 88 (90)
+. .+. +|+|++.
T Consensus 92 ~~~~~~~~~fD~i~~~ 107 (177)
T 2esr_A 92 RAIDCLTGRFDLVFLD 107 (177)
T ss_dssp HHHHHBCSCEEEEEEC
T ss_pred HhHHhhcCCCCEEEEC
Confidence 72 223 9999875
No 102
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.27 E-value=1.7e-12 Score=86.54 Aligned_cols=69 Identities=12% Similarity=0.090 Sum_probs=57.9
Q ss_pred CCCCCeEEEecCCchHHHHHHH-HHCCCCeEEEeeh-HHHHHhCCC-------CCCeeEEEecCCC-CCCc-ccEEEeec
Q 034578 21 FNNIRSMVDVGGGTGTVLAEIV-KSYPHIKGINFDL-QHVIATAPT-------HEGVSHVGGDMFD-AIPN-ADAVFMKV 89 (90)
Q Consensus 21 ~~~~~~vlDvG~G~G~~~~~l~-~~~p~~~~~~~D~-p~~~~~a~~-------~~rv~~~~~d~~~-~~p~-~D~i~l~~ 89 (90)
+.+..+|||||||+|.++..++ ..+|..+++++|+ |.+++.+++ .++++++.+|+.+ +++. +|+|++..
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~ 195 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSNG 195 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECCS
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEECC
Confidence 3467899999999999999996 6689999999999 999988765 2469999999987 4444 99999864
No 103
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.27 E-value=1.6e-11 Score=82.64 Aligned_cols=77 Identities=14% Similarity=0.214 Sum_probs=64.5
Q ss_pred hhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC----CCCeeEEEecCCC-CCC
Q 034578 7 ITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT----HEGVSHVGGDMFD-AIP 80 (90)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~----~~rv~~~~~d~~~-~~p 80 (90)
.+++.+++.+. ..+..+|||||||+|.++..++++ ..+++++|+ +.+++.+++ .++++++.+|+.+ +++
T Consensus 37 ~i~~~Iv~~l~---~~~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~ 111 (295)
T 3gru_A 37 NFVNKAVESAN---LTKDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLN 111 (295)
T ss_dssp HHHHHHHHHTT---CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGG
T ss_pred HHHHHHHHhcC---CCCcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcc
Confidence 45677777777 566789999999999999999998 578999999 999888775 3789999999998 666
Q ss_pred c--ccEEEee
Q 034578 81 N--ADAVFMK 88 (90)
Q Consensus 81 ~--~D~i~l~ 88 (90)
. +|.|+.+
T Consensus 112 ~~~fD~Iv~N 121 (295)
T 3gru_A 112 KLDFNKVVAN 121 (295)
T ss_dssp GSCCSEEEEE
T ss_pred cCCccEEEEe
Confidence 5 8998864
No 104
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.27 E-value=5.6e-12 Score=85.88 Aligned_cols=82 Identities=16% Similarity=0.131 Sum_probs=67.6
Q ss_pred chhhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHC-CCCeEEEeeh-HHHHHhCCCC------CCeeEEEecC
Q 034578 4 TTKITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSY-PHIKGINFDL-QHVIATAPTH------EGVSHVGGDM 75 (90)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-p~~~~~a~~~------~rv~~~~~d~ 75 (90)
....++..++.... +.+..+|||+|||+|.++++++... |..+++++|+ |.+++.|+++ +++++..+|+
T Consensus 187 l~~~la~~l~~~~~---~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~ 263 (354)
T 3tma_A 187 LTPVLAQALLRLAD---ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADA 263 (354)
T ss_dssp CCHHHHHHHHHHTT---CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCG
T ss_pred cCHHHHHHHHHHhC---CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCCh
Confidence 44566777777777 5667899999999999999999998 8999999999 9999988762 3799999999
Q ss_pred CC-CCC--cccEEEee
Q 034578 76 FD-AIP--NADAVFMK 88 (90)
Q Consensus 76 ~~-~~p--~~D~i~l~ 88 (90)
.+ +.+ .+|+|+++
T Consensus 264 ~~~~~~~~~~D~Ii~n 279 (354)
T 3tma_A 264 RHLPRFFPEVDRILAN 279 (354)
T ss_dssp GGGGGTCCCCSEEEEC
T ss_pred hhCccccCCCCEEEEC
Confidence 87 332 37999873
No 105
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.27 E-value=1.1e-11 Score=81.61 Aligned_cols=77 Identities=17% Similarity=0.253 Sum_probs=63.2
Q ss_pred HHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHH-CCCCeEEEeeh-HHHHHhCCCC-------CCeeEEEecCCCCC
Q 034578 9 MKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKS-YPHIKGINFDL-QHVIATAPTH-------EGVSHVGGDMFDAI 79 (90)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~-~p~~~~~~~D~-p~~~~~a~~~-------~rv~~~~~d~~~~~ 79 (90)
+..++..++ ..+..+|||+|||+|.++..++++ .|..+++++|+ |.+++.++++ ++++++.+|+.+.+
T Consensus 101 ~~~i~~~~~---~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 177 (277)
T 1o54_A 101 SSFIAMMLD---VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGF 177 (277)
T ss_dssp HHHHHHHTT---CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCC
T ss_pred HHHHHHHhC---CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcc
Confidence 345555555 556789999999999999999999 68899999999 9998888752 58999999998765
Q ss_pred Cc--ccEEEee
Q 034578 80 PN--ADAVFMK 88 (90)
Q Consensus 80 p~--~D~i~l~ 88 (90)
+. +|+|++.
T Consensus 178 ~~~~~D~V~~~ 188 (277)
T 1o54_A 178 DEKDVDALFLD 188 (277)
T ss_dssp SCCSEEEEEEC
T ss_pred cCCccCEEEEC
Confidence 53 9999874
No 106
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.27 E-value=5.1e-12 Score=78.13 Aligned_cols=81 Identities=16% Similarity=0.116 Sum_probs=63.0
Q ss_pred hhhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-------CCeeEEEecCC
Q 034578 5 TKITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-------EGVSHVGGDMF 76 (90)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-------~rv~~~~~d~~ 76 (90)
+..+.+.+++.+.. ..+..+|||+|||+|.++..+++ .+..+++++|+ |.+++.++++ ++++++.+|+.
T Consensus 28 ~~~~~~~~~~~l~~--~~~~~~vLD~GcG~G~~~~~~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 104 (187)
T 2fhp_A 28 TDKVKESIFNMIGP--YFDGGMALDLYSGSGGLAIEAVS-RGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDAN 104 (187)
T ss_dssp CHHHHHHHHHHHCS--CCSSCEEEETTCTTCHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH
T ss_pred HHHHHHHHHHHHHh--hcCCCCEEEeCCccCHHHHHHHH-cCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHH
Confidence 44556666666642 34567999999999999999888 46679999999 9999988752 57999999997
Q ss_pred CCC------C-cccEEEee
Q 034578 77 DAI------P-NADAVFMK 88 (90)
Q Consensus 77 ~~~------p-~~D~i~l~ 88 (90)
+.. + .+|+|++.
T Consensus 105 ~~~~~~~~~~~~fD~i~~~ 123 (187)
T 2fhp_A 105 RALEQFYEEKLQFDLVLLD 123 (187)
T ss_dssp HHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHhcCCCCCEEEEC
Confidence 721 2 39999975
No 107
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.26 E-value=2.2e-11 Score=77.98 Aligned_cols=76 Identities=20% Similarity=0.208 Sum_probs=59.7
Q ss_pred HHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC---CCeeEEEecCCC-CCCc--cc
Q 034578 11 AFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH---EGVSHVGGDMFD-AIPN--AD 83 (90)
Q Consensus 11 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~---~rv~~~~~d~~~-~~p~--~D 83 (90)
.+.+.++ ..+..+|||+|||+|.++..++++. ..+++++|+ +.+++.+++. .+++++.+|+.+ +++. +|
T Consensus 34 ~l~~~~~---~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD 109 (243)
T 3bkw_A 34 ALRAMLP---EVGGLRIVDLGCGFGWFCRWAHEHG-ASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFD 109 (243)
T ss_dssp HHHHHSC---CCTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEE
T ss_pred HHHHhcc---ccCCCEEEEEcCcCCHHHHHHHHCC-CCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCce
Confidence 4555555 3456899999999999999999873 238999999 9999888653 479999999987 4542 99
Q ss_pred EEEeecC
Q 034578 84 AVFMKVA 90 (90)
Q Consensus 84 ~i~l~~v 90 (90)
+|++..+
T Consensus 110 ~v~~~~~ 116 (243)
T 3bkw_A 110 LAYSSLA 116 (243)
T ss_dssp EEEEESC
T ss_pred EEEEecc
Confidence 9998753
No 108
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.26 E-value=8.2e-12 Score=82.05 Aligned_cols=64 Identities=9% Similarity=0.009 Sum_probs=53.5
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-----------------------CCCeeEEEecCCC-
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-----------------------HEGVSHVGGDMFD- 77 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-----------------------~~rv~~~~~d~~~- 77 (90)
+..+|||+|||+|..+..|+++ +.+++++|+ |.+++.|++ ..+++++.+|+++
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 5679999999999999999987 568999999 999987742 1579999999998
Q ss_pred CC---CcccEEEee
Q 034578 78 AI---PNADAVFMK 88 (90)
Q Consensus 78 ~~---p~~D~i~l~ 88 (90)
+. ..||+|+.+
T Consensus 146 ~~~~~~~FD~V~~~ 159 (252)
T 2gb4_A 146 PRANIGKFDRIWDR 159 (252)
T ss_dssp GGGCCCCEEEEEES
T ss_pred CcccCCCEEEEEEh
Confidence 43 239999864
No 109
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.26 E-value=8.3e-12 Score=78.12 Aligned_cols=68 Identities=18% Similarity=0.232 Sum_probs=56.6
Q ss_pred CCCCCeEEEecCCchHHHHHHHHHC-CCCeEEEeeh-HHHHHhCCCC-------CCeeEEEecCCC-C-C-Cc-ccEEEe
Q 034578 21 FNNIRSMVDVGGGTGTVLAEIVKSY-PHIKGINFDL-QHVIATAPTH-------EGVSHVGGDMFD-A-I-PN-ADAVFM 87 (90)
Q Consensus 21 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-p~~~~~a~~~-------~rv~~~~~d~~~-~-~-p~-~D~i~l 87 (90)
..+..+|||+|||+|.++..+++++ |..+++++|+ |.+++.++++ ++++++.+|+.+ + . +. +|+|++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 99 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMF 99 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEE
Confidence 3456799999999999999999986 7789999999 9999988752 689999999865 2 2 33 999987
Q ss_pred e
Q 034578 88 K 88 (90)
Q Consensus 88 ~ 88 (90)
.
T Consensus 100 ~ 100 (197)
T 3eey_A 100 N 100 (197)
T ss_dssp E
T ss_pred c
Confidence 5
No 110
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.26 E-value=1.7e-11 Score=82.60 Aligned_cols=68 Identities=15% Similarity=0.189 Sum_probs=57.1
Q ss_pred CCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC------CCeeEEEecCCC-CCCcccEEEee
Q 034578 21 FNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH------EGVSHVGGDMFD-AIPNADAVFMK 88 (90)
Q Consensus 21 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~------~rv~~~~~d~~~-~~p~~D~i~l~ 88 (90)
..+..+|||||||+|.++..++.+.++.+++++|+ |.+++.|++. ++++++.+|..+ +-..||+|++.
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~d~~FDvV~~~ 195 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVIDGLEFDVLMVA 195 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGGGCCCSEEEEC
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCCCCCcCEEEEC
Confidence 56789999999999988877777778999999999 9999998762 689999999987 32239999875
No 111
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.25 E-value=6.3e-12 Score=81.03 Aligned_cols=67 Identities=13% Similarity=0.182 Sum_probs=55.4
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC------CCeeEEEecCCC-CCCc--ccEEEeecC
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH------EGVSHVGGDMFD-AIPN--ADAVFMKVA 90 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~------~rv~~~~~d~~~-~~p~--~D~i~l~~v 90 (90)
+..+|||+|||+|.++..++++. ..+++++|+ +.+++.++++ .+++++.+|+.+ +.+. +|+|++.++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 155 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWV 155 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESC
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcch
Confidence 46899999999999999999887 568999999 9999888652 358999999876 4443 999998753
No 112
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.25 E-value=1.8e-11 Score=79.65 Aligned_cols=66 Identities=14% Similarity=0.289 Sum_probs=54.9
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCC------------CCCCeeEEEecCCCC----CCc--cc
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAP------------THEGVSHVGGDMFDA----IPN--AD 83 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~------------~~~rv~~~~~d~~~~----~p~--~D 83 (90)
+..+|||||||+|.++..+++++|+.+++++|+ +.+++.|+ ...+++++.+|+.+. ++. +|
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D 125 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLT 125 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEE
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCee
Confidence 456899999999999999999999999999999 99887653 136899999999762 333 89
Q ss_pred EEEee
Q 034578 84 AVFMK 88 (90)
Q Consensus 84 ~i~l~ 88 (90)
.|++.
T Consensus 126 ~v~~~ 130 (235)
T 3ckk_A 126 KMFFL 130 (235)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 98764
No 113
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.25 E-value=1.1e-11 Score=84.29 Aligned_cols=64 Identities=16% Similarity=0.225 Sum_probs=55.8
Q ss_pred CeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC------CCCeeEEEecCCC---CCC-c-ccEEEee
Q 034578 25 RSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT------HEGVSHVGGDMFD---AIP-N-ADAVFMK 88 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~------~~rv~~~~~d~~~---~~p-~-~D~i~l~ 88 (90)
.+|||||||+|.++..+++++|+.+++++|+ |.+++.+++ .+|++++.+|..+ ..+ . ||+|++.
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D 166 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRD 166 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEEC
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEEC
Confidence 4999999999999999999999999999999 999998875 3689999999876 333 3 9999873
No 114
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.25 E-value=1.3e-11 Score=81.29 Aligned_cols=65 Identities=20% Similarity=0.302 Sum_probs=55.2
Q ss_pred CCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-------CCeeEEEecCCC-C-CC-c-ccEEEeecC
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-------EGVSHVGGDMFD-A-IP-N-ADAVFMKVA 90 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-------~rv~~~~~d~~~-~-~p-~-~D~i~l~~v 90 (90)
..+|||||||+|.++..+++. ..+++++|+ |.+++.+++. ++++++.+|+.+ + ++ . +|+|++..+
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 145 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAV 145 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESC
T ss_pred CCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECch
Confidence 579999999999999999998 679999999 9999888752 689999999987 3 33 3 999998753
No 115
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.24 E-value=2.8e-11 Score=77.34 Aligned_cols=78 Identities=14% Similarity=0.137 Sum_probs=62.8
Q ss_pred hhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC----CCeeEEEecCCCCCC-
Q 034578 7 ITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH----EGVSHVGGDMFDAIP- 80 (90)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~----~rv~~~~~d~~~~~p- 80 (90)
.....+++.+. ..+..+|||+|||+|.++..+++.. .+++++|+ |.+++.++++ ++++++.+|+.+.++
T Consensus 57 ~~~~~~~~~~~---~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~ 131 (231)
T 1vbf_A 57 NLGIFMLDELD---LHKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEE 131 (231)
T ss_dssp HHHHHHHHHTT---CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGG
T ss_pred HHHHHHHHhcC---CCCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCccccccc
Confidence 44556666666 5567899999999999999999986 78999999 9999888652 389999999987443
Q ss_pred --cccEEEeec
Q 034578 81 --NADAVFMKV 89 (90)
Q Consensus 81 --~~D~i~l~~ 89 (90)
.+|+|++..
T Consensus 132 ~~~fD~v~~~~ 142 (231)
T 1vbf_A 132 EKPYDRVVVWA 142 (231)
T ss_dssp GCCEEEEEESS
T ss_pred CCCccEEEECC
Confidence 289998764
No 116
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.24 E-value=7.3e-12 Score=79.13 Aligned_cols=67 Identities=15% Similarity=0.111 Sum_probs=55.9
Q ss_pred CCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCC-CCCc-ccEEEeecC
Q 034578 22 NNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTHEGVSHVGGDMFD-AIPN-ADAVFMKVA 90 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~-~~p~-~D~i~l~~v 90 (90)
.+..+|||+|||+|.++..+++. ..+++++|+ +.+++.++++.++++..+|+.+ +.+. +|+|++..+
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~ 111 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRLGRPVRTMLFHQLDAIDAYDAVWAHAC 111 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTSCCEECCGGGCCCCSCEEEEEECSC
T ss_pred CCCCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhcCCceEEeeeccCCCCCcEEEEEecCc
Confidence 35679999999999999999987 568999999 9999988876578888999877 4333 999998753
No 117
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.24 E-value=7.7e-12 Score=81.25 Aligned_cols=55 Identities=13% Similarity=0.046 Sum_probs=44.1
Q ss_pred hhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHH--CCCCeEEEeeh-HHHHHhCCC
Q 034578 7 ITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKS--YPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~--~p~~~~~~~D~-p~~~~~a~~ 64 (90)
.+.+.+++.+. .....+|||+|||+|.++..+++. +|..+++++|+ |.+++.|++
T Consensus 38 ~l~~~~l~~~~---~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~ 95 (250)
T 1o9g_A 38 EIFQRALARLP---GDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAK 95 (250)
T ss_dssp HHHHHHHHTSS---CCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHhcc---cCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHH
Confidence 34455555444 234579999999999999999998 78889999999 999998874
No 118
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.24 E-value=1.7e-11 Score=81.28 Aligned_cols=78 Identities=13% Similarity=0.072 Sum_probs=57.0
Q ss_pred hhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCC-CC-----
Q 034578 7 ITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTHEGVSHVGGDMFD-AI----- 79 (90)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~-~~----- 79 (90)
...+.+++.++ ..+..+|||||||+|.++..++++ ..+++++|+ |.|++.++++-+-.++..++.+ +.
T Consensus 32 ~~~~~il~~l~---l~~g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~ 106 (261)
T 3iv6_A 32 SDRENDIFLEN---IVPGSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKE 106 (261)
T ss_dssp CHHHHHHHTTT---CCTTCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGG
T ss_pred HHHHHHHHhcC---CCCcCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHhccceeeeeecccccccc
Confidence 45566777776 566789999999999999999987 468999999 9999988763111134444443 22
Q ss_pred -C-cccEEEeec
Q 034578 80 -P-NADAVFMKV 89 (90)
Q Consensus 80 -p-~~D~i~l~~ 89 (90)
+ .||+|+++.
T Consensus 107 ~~~~fD~Vv~~~ 118 (261)
T 3iv6_A 107 LAGHFDFVLNDR 118 (261)
T ss_dssp GTTCCSEEEEES
T ss_pred cCCCccEEEEhh
Confidence 2 399999864
No 119
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.24 E-value=5.5e-11 Score=75.97 Aligned_cols=81 Identities=15% Similarity=0.149 Sum_probs=59.4
Q ss_pred hHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHC-CCCeEEEeeh-HHHHHhC----CCCCCeeEEEecCCCC---
Q 034578 8 TMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSY-PHIKGINFDL-QHVIATA----PTHEGVSHVGGDMFDA--- 78 (90)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-p~~~~~a----~~~~rv~~~~~d~~~~--- 78 (90)
....++..+....+.+..+|||+|||+|.++..+++.. |..+++++|+ |.+++.+ ++.++++++.+|+.+.
T Consensus 58 ~~~~i~~~l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 137 (227)
T 1g8a_A 58 LGAAIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEY 137 (227)
T ss_dssp HHHHHHTTCCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGG
T ss_pred HHHHHHhhHHhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchh
Confidence 34556333331014566799999999999999999985 6789999999 8665544 4457899999999872
Q ss_pred --CCc-ccEEEee
Q 034578 79 --IPN-ADAVFMK 88 (90)
Q Consensus 79 --~p~-~D~i~l~ 88 (90)
++. +|+|++.
T Consensus 138 ~~~~~~~D~v~~~ 150 (227)
T 1g8a_A 138 RALVPKVDVIFED 150 (227)
T ss_dssp TTTCCCEEEEEEC
T ss_pred hcccCCceEEEEC
Confidence 233 8999864
No 120
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.24 E-value=3e-11 Score=77.17 Aligned_cols=63 Identities=27% Similarity=0.401 Sum_probs=54.5
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-CCeeEEEecCCC-CCCc-ccEEEe
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-EGVSHVGGDMFD-AIPN-ADAVFM 87 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-~rv~~~~~d~~~-~~p~-~D~i~l 87 (90)
+..+|||+|||+|.++..++++++ +++++|+ |.+++.+++. ++++++.+|+.+ +.+. +|+|++
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~D~v~~ 106 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRLPDATLHQGDMRDFRLGRKFSAVVS 106 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCCSSCEEEEEE
T ss_pred CCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHcccCCCCcEEEE
Confidence 567999999999999999999976 8999999 9999988763 679999999987 4444 999994
No 121
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.24 E-value=1.8e-11 Score=80.67 Aligned_cols=75 Identities=19% Similarity=0.124 Sum_probs=59.9
Q ss_pred HHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-----CCeeEEEecCCC-CCCc-
Q 034578 10 KAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-----EGVSHVGGDMFD-AIPN- 81 (90)
Q Consensus 10 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-----~rv~~~~~d~~~-~~p~- 81 (90)
..+++.++ ..+..+|||+|||+|.++..+++. ..+++++|+ +.+++.+++. .+++++.+|+.+ +.+.
T Consensus 110 ~~~~~~~~---~~~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~ 184 (286)
T 3m70_A 110 GDVVDAAK---IISPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQEN 184 (286)
T ss_dssp HHHHHHHH---HSCSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCCCSC
T ss_pred HHHHHHhh---ccCCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccccCC
Confidence 34455555 335689999999999999999998 569999999 9999887752 389999999987 3444
Q ss_pred ccEEEeec
Q 034578 82 ADAVFMKV 89 (90)
Q Consensus 82 ~D~i~l~~ 89 (90)
+|+|+++.
T Consensus 185 fD~i~~~~ 192 (286)
T 3m70_A 185 YDFIVSTV 192 (286)
T ss_dssp EEEEEECS
T ss_pred ccEEEEcc
Confidence 99999864
No 122
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.24 E-value=4e-11 Score=77.07 Aligned_cols=68 Identities=13% Similarity=0.139 Sum_probs=55.0
Q ss_pred CCCCCeEEEecCCchHHHHHHHHHC-CCCeEEEeeh-HHHH----HhCCCCCCeeEEEecCCCC--C---C-cccEEEee
Q 034578 21 FNNIRSMVDVGGGTGTVLAEIVKSY-PHIKGINFDL-QHVI----ATAPTHEGVSHVGGDMFDA--I---P-NADAVFMK 88 (90)
Q Consensus 21 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-p~~~----~~a~~~~rv~~~~~d~~~~--~---p-~~D~i~l~ 88 (90)
+.+..+|||+|||+|.++..+++.+ |..+++++|+ |.++ +.++++.+++++.+|+.+. + + .+|+|++.
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~ 154 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFAD 154 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEEC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEc
Confidence 4566799999999999999999996 7889999999 7654 4444458899999999872 2 2 38999874
No 123
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.24 E-value=1.5e-11 Score=77.20 Aligned_cols=66 Identities=17% Similarity=0.144 Sum_probs=55.5
Q ss_pred CCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC----CCCeeEEEecCCC-CCCc--ccEEEee
Q 034578 22 NNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT----HEGVSHVGGDMFD-AIPN--ADAVFMK 88 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~----~~rv~~~~~d~~~-~~p~--~D~i~l~ 88 (90)
.+..+|||+|||+|.++..+++..+. +++++|+ |.+++.+++ .++++++.+|+.+ +++. +|+|+++
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~ 114 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEK 114 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEE
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEEC
Confidence 35679999999999999999998665 8999999 999888765 2689999999987 5543 9999975
No 124
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.24 E-value=7.4e-12 Score=78.58 Aligned_cols=64 Identities=17% Similarity=0.203 Sum_probs=55.4
Q ss_pred CCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-CCCeeEEEecCCC-CCC-c-ccEEEeec
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-HEGVSHVGGDMFD-AIP-N-ADAVFMKV 89 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-~~rv~~~~~d~~~-~~p-~-~D~i~l~~ 89 (90)
..+|||+|||+|.++..++++ +.+++++|+ +.+++.+++ .++++++.+|+.+ +++ . +|+|++.+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 110 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWY 110 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEES
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehh
Confidence 578999999999999999998 568999999 999998876 4789999999987 444 3 99999865
No 125
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.23 E-value=3.1e-11 Score=78.75 Aligned_cols=67 Identities=18% Similarity=0.307 Sum_probs=57.5
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-CCCeeEEEecCCC-CCCc--ccEEEeec
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-HEGVSHVGGDMFD-AIPN--ADAVFMKV 89 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-~~rv~~~~~d~~~-~~p~--~D~i~l~~ 89 (90)
+..+|||+|||+|.++..+++.+|..+++++|+ +.+++.+++ ..++.+..+|+.+ +++. +|+|+...
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 156 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIY 156 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEES
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeC
Confidence 567999999999999999999998899999999 999998876 4678999999876 4443 89998753
No 126
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.23 E-value=1.1e-11 Score=80.99 Aligned_cols=67 Identities=16% Similarity=0.272 Sum_probs=56.7
Q ss_pred CC-CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-------CCCeeEEEecCCCC---CC-c-ccEEE
Q 034578 21 FN-NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-------HEGVSHVGGDMFDA---IP-N-ADAVF 86 (90)
Q Consensus 21 ~~-~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-------~~rv~~~~~d~~~~---~p-~-~D~i~ 86 (90)
.. +..+|||+|||+|.++..++++.+. +++++|+ |.+++.|++ .+|++++.+|+.+. ++ . +|+|+
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii 124 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVT 124 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEE
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEE
Confidence 45 6789999999999999999999776 9999999 999988875 25799999999872 32 3 99999
Q ss_pred ee
Q 034578 87 MK 88 (90)
Q Consensus 87 l~ 88 (90)
++
T Consensus 125 ~n 126 (259)
T 3lpm_A 125 CN 126 (259)
T ss_dssp EC
T ss_pred EC
Confidence 84
No 127
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.23 E-value=3.7e-11 Score=78.94 Aligned_cols=80 Identities=16% Similarity=0.277 Sum_probs=63.2
Q ss_pred hhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC--CCeeEEEecCCC-CCCc
Q 034578 6 KITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH--EGVSHVGGDMFD-AIPN 81 (90)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~--~rv~~~~~d~~~-~~p~ 81 (90)
..+.+.+++.++ ..+..+|||+|||+|.++..++++ +..+++++|+ +.+++.++++ .+++++.+|+.+ +++.
T Consensus 17 ~~i~~~iv~~~~---~~~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~~~~~ 92 (249)
T 3ftd_A 17 EGVLKKIAEELN---IEEGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSIGDERLEVINEDASKFPFCS 92 (249)
T ss_dssp HHHHHHHHHHTT---CCTTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTTCCGGG
T ss_pred HHHHHHHHHhcC---CCCcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhccCCCeEEEEcchhhCChhH
Confidence 346677888777 556789999999999999999987 5688999999 9999988764 679999999988 5553
Q ss_pred -c-cEEEeec
Q 034578 82 -A-DAVFMKV 89 (90)
Q Consensus 82 -~-D~i~l~~ 89 (90)
. +..++++
T Consensus 93 ~~~~~~vv~N 102 (249)
T 3ftd_A 93 LGKELKVVGN 102 (249)
T ss_dssp SCSSEEEEEE
T ss_pred ccCCcEEEEE
Confidence 1 3445443
No 128
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.23 E-value=1.4e-11 Score=80.11 Aligned_cols=66 Identities=20% Similarity=0.189 Sum_probs=55.9
Q ss_pred CCCeEEEecCCchHHHHHHHHH----CCCCeEEEeeh-HHHHHhCCC-CCCeeEEEecCCCC--C---C--cccEEEee
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKS----YPHIKGINFDL-QHVIATAPT-HEGVSHVGGDMFDA--I---P--NADAVFMK 88 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~----~p~~~~~~~D~-p~~~~~a~~-~~rv~~~~~d~~~~--~---p--~~D~i~l~ 88 (90)
+..+|||||||+|..+..+++. .|..+++++|+ |.+++.|+. .++++++.+|..+. + + .+|+|++.
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d 159 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFID 159 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEEC
Confidence 3579999999999999999998 78999999999 999888764 47899999999873 2 2 38999864
No 129
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.23 E-value=6.5e-11 Score=74.13 Aligned_cols=63 Identities=16% Similarity=0.218 Sum_probs=49.3
Q ss_pred HHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCC--CCeEEEeehHHHHHhCCCCCCeeEEEecCCC
Q 034578 9 MKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYP--HIKGINFDLQHVIATAPTHEGVSHVGGDMFD 77 (90)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p--~~~~~~~D~p~~~~~a~~~~rv~~~~~d~~~ 77 (90)
...+.+.+.. +.+..+|||+|||+|.++..+++++| ..+++++|+.++ ...++++++.+|+.+
T Consensus 10 l~~~~~~~~~--~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~----~~~~~v~~~~~d~~~ 74 (201)
T 2plw_A 10 LIELDNKYLF--LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIM----DPIPNVYFIQGEIGK 74 (201)
T ss_dssp HHHHHHHHCC--CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCC----CCCTTCEEEECCTTT
T ss_pred HHHHHHHcCC--CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCcc----CCCCCceEEEccccc
Confidence 3445666652 45667999999999999999999998 789999998332 124679999999987
No 130
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.23 E-value=3.2e-11 Score=78.75 Aligned_cols=71 Identities=15% Similarity=0.390 Sum_probs=58.7
Q ss_pred hhhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC----CCCeeEEEecCCC-C
Q 034578 5 TKITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT----HEGVSHVGGDMFD-A 78 (90)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~----~~rv~~~~~d~~~-~ 78 (90)
+....+.+++.++ ..+..+|||+|||+|.++..++++. .+++++|+ +.+++.+++ .++++++.+|+.+ +
T Consensus 15 d~~~~~~i~~~~~---~~~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~ 89 (244)
T 1qam_A 15 SKHNIDKIMTNIR---LNEHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFK 89 (244)
T ss_dssp CHHHHHHHHTTCC---CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCC
T ss_pred CHHHHHHHHHhCC---CCCCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCC
Confidence 3456677777776 5567899999999999999999986 78999999 999887764 3689999999987 5
Q ss_pred CC
Q 034578 79 IP 80 (90)
Q Consensus 79 ~p 80 (90)
++
T Consensus 90 ~~ 91 (244)
T 1qam_A 90 FP 91 (244)
T ss_dssp CC
T ss_pred cc
Confidence 55
No 131
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.23 E-value=7.8e-12 Score=83.87 Aligned_cols=78 Identities=17% Similarity=0.293 Sum_probs=59.7
Q ss_pred hhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC------CCCeeEEEecCCC-
Q 034578 6 KITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT------HEGVSHVGGDMFD- 77 (90)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~------~~rv~~~~~d~~~- 77 (90)
....+.+++.++ ..+..+|||+|||+|.++..++++ ..+++++|+ +.+++.+++ .++++++.+|+.+
T Consensus 28 ~~i~~~i~~~~~---~~~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~ 102 (299)
T 2h1r_A 28 PGILDKIIYAAK---IKSSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKT 102 (299)
T ss_dssp HHHHHHHHHHHC---CCTTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSS
T ss_pred HHHHHHHHHhcC---CCCcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhC
Confidence 345677777776 556789999999999999999987 468999999 999887764 2689999999988
Q ss_pred CCCcccEEEee
Q 034578 78 AIPNADAVFMK 88 (90)
Q Consensus 78 ~~p~~D~i~l~ 88 (90)
+++.+|+|+.+
T Consensus 103 ~~~~~D~Vv~n 113 (299)
T 2h1r_A 103 VFPKFDVCTAN 113 (299)
T ss_dssp CCCCCSEEEEE
T ss_pred CcccCCEEEEc
Confidence 55669999874
No 132
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.23 E-value=3.1e-11 Score=82.13 Aligned_cols=76 Identities=17% Similarity=0.271 Sum_probs=59.5
Q ss_pred HHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCC-------CCCeeEEEecCCC-CCC-
Q 034578 10 KAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPT-------HEGVSHVGGDMFD-AIP- 80 (90)
Q Consensus 10 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~-------~~rv~~~~~d~~~-~~p- 80 (90)
+.+.+... ..+..+|||||||+|.++..++++ +..+++++|+.++++.|++ .++++++.+|+.+ ++|
T Consensus 54 ~~i~~~~~---~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 129 (340)
T 2fyt_A 54 DFIYQNPH---IFKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPV 129 (340)
T ss_dssp HHHHHCGG---GTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSC
T ss_pred HHHHhhhh---hcCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCC
Confidence 45555544 456689999999999999999987 4568999999338887765 2789999999987 566
Q ss_pred c-ccEEEeec
Q 034578 81 N-ADAVFMKV 89 (90)
Q Consensus 81 ~-~D~i~l~~ 89 (90)
+ +|+|+..+
T Consensus 130 ~~~D~Ivs~~ 139 (340)
T 2fyt_A 130 EKVDVIISEW 139 (340)
T ss_dssp SCEEEEEECC
T ss_pred CcEEEEEEcC
Confidence 3 99999654
No 133
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.23 E-value=1.5e-11 Score=79.30 Aligned_cols=64 Identities=14% Similarity=0.109 Sum_probs=54.2
Q ss_pred CeEEEecCCchHHHHHHHHHCC-CCeEEEeeh-HHHHHhCCC-------C-CCeeEEEecCCC---CC-Cc-ccEEEee
Q 034578 25 RSMVDVGGGTGTVLAEIVKSYP-HIKGINFDL-QHVIATAPT-------H-EGVSHVGGDMFD---AI-PN-ADAVFMK 88 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-p~~~~~a~~-------~-~rv~~~~~d~~~---~~-p~-~D~i~l~ 88 (90)
.+|||||||+|..+..+++..| +.+++++|+ |.+++.|++ . +|++++.+|..+ .+ +. ||+|++.
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d 136 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQ 136 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEEC
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEc
Confidence 4999999999999999999975 899999999 999988865 2 589999999876 24 23 9999874
No 134
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.23 E-value=1.5e-11 Score=78.95 Aligned_cols=64 Identities=25% Similarity=0.319 Sum_probs=53.4
Q ss_pred CCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-------CCeeEEEecCCCCCC--cccEEEeec
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-------EGVSHVGGDMFDAIP--NADAVFMKV 89 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-------~rv~~~~~d~~~~~p--~~D~i~l~~ 89 (90)
..+|||+|||+|.++..+++ +..+++++|+ |.+++.+++. .+++++.+|+.+..+ .+|+|+++.
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~ 140 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS--PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFDYV 140 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB--TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEEES
T ss_pred CCCEEEeCCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEEEECh
Confidence 35999999999999999976 5788999999 9999887651 469999999988433 399999765
No 135
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.22 E-value=8.5e-12 Score=76.96 Aligned_cols=80 Identities=23% Similarity=0.247 Sum_probs=64.2
Q ss_pred hhhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-------CCeeEEEecCC
Q 034578 5 TKITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-------EGVSHVGGDMF 76 (90)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-------~rv~~~~~d~~ 76 (90)
+..+...+++.+. ..+..+|||+|||+|.++..+++.. .+++++|+ |.+++.++++ +++++..+|+.
T Consensus 18 ~~~~~~~~~~~~~---~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 92 (192)
T 1l3i_A 18 AMEVRCLIMCLAE---PGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAP 92 (192)
T ss_dssp CHHHHHHHHHHHC---CCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHH
T ss_pred hHHHHHHHHHhcC---CCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHH
Confidence 3455666777666 5667899999999999999999987 78999999 9998887651 68999999987
Q ss_pred CCC---CcccEEEeec
Q 034578 77 DAI---PNADAVFMKV 89 (90)
Q Consensus 77 ~~~---p~~D~i~l~~ 89 (90)
+.+ +.+|+|++..
T Consensus 93 ~~~~~~~~~D~v~~~~ 108 (192)
T 1l3i_A 93 EALCKIPDIDIAVVGG 108 (192)
T ss_dssp HHHTTSCCEEEEEESC
T ss_pred HhcccCCCCCEEEECC
Confidence 633 3499999764
No 136
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.22 E-value=9.8e-12 Score=78.58 Aligned_cols=76 Identities=14% Similarity=0.142 Sum_probs=60.7
Q ss_pred HHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCCC-----C-Cc-
Q 034578 10 KAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTHEGVSHVGGDMFDA-----I-PN- 81 (90)
Q Consensus 10 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~~-----~-p~- 81 (90)
..+++.+. ..+..+|||+|||+|.++..+++. ..+++++|+ +.+++.+++..++++..+|+.+. . ..
T Consensus 42 ~~~~~~~~---~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (227)
T 3e8s_A 42 QAILLAIL---GRQPERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKD 116 (227)
T ss_dssp HHHHHHHH---HTCCSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCC
T ss_pred HHHHHHhh---cCCCCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCC
Confidence 44556555 345689999999999999999998 668999999 99999998888888988887641 2 23
Q ss_pred ccEEEeecC
Q 034578 82 ADAVFMKVA 90 (90)
Q Consensus 82 ~D~i~l~~v 90 (90)
+|+|++.++
T Consensus 117 fD~v~~~~~ 125 (227)
T 3e8s_A 117 YDLICANFA 125 (227)
T ss_dssp EEEEEEESC
T ss_pred ccEEEECch
Confidence 999998753
No 137
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.22 E-value=4.9e-12 Score=82.04 Aligned_cols=77 Identities=14% Similarity=0.149 Sum_probs=58.1
Q ss_pred hhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-----CCCeeEEEecCCC--
Q 034578 6 KITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-----HEGVSHVGGDMFD-- 77 (90)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-----~~rv~~~~~d~~~-- 77 (90)
..+.+.+++... .+..+|||||||+|..+..+++..| .+++++|+ |.+++.|++ ..+++++.+|+.+
T Consensus 47 ~~~m~~~a~~~~----~~G~rVLdiG~G~G~~~~~~~~~~~-~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~ 121 (236)
T 3orh_A 47 TPYMHALAAAAS----SKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVA 121 (236)
T ss_dssp HHHHHHHHHHHT----TTCEEEEEECCTTSHHHHHHTTSCE-EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHG
T ss_pred HHHHHHHHHhhc----cCCCeEEEECCCccHHHHHHHHhCC-cEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhc
Confidence 334455555444 3567999999999999999998776 47999999 999998875 3568888888754
Q ss_pred -CCCc--ccEEEe
Q 034578 78 -AIPN--ADAVFM 87 (90)
Q Consensus 78 -~~p~--~D~i~l 87 (90)
+++. ||.|++
T Consensus 122 ~~~~~~~FD~i~~ 134 (236)
T 3orh_A 122 PTLPDGHFDGILY 134 (236)
T ss_dssp GGSCTTCEEEEEE
T ss_pred ccccccCCceEEE
Confidence 3443 898874
No 138
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.22 E-value=3.7e-11 Score=76.34 Aligned_cols=66 Identities=17% Similarity=0.217 Sum_probs=54.8
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-----------CCCeeEEEecCCC-CCCc--ccEEEe
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-----------HEGVSHVGGDMFD-AIPN--ADAVFM 87 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-----------~~rv~~~~~d~~~-~~p~--~D~i~l 87 (90)
+..+|||+|||+|.++..+++. ..+++++|+ |.+++.+++ ..++++..+|+.+ +++. +|+|++
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEE
Confidence 5679999999999999999998 679999999 998887764 1368999999987 4443 999998
Q ss_pred ecC
Q 034578 88 KVA 90 (90)
Q Consensus 88 ~~v 90 (90)
..+
T Consensus 108 ~~~ 110 (235)
T 3sm3_A 108 QAF 110 (235)
T ss_dssp ESC
T ss_pred cch
Confidence 753
No 139
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.22 E-value=1.9e-11 Score=83.36 Aligned_cols=67 Identities=21% Similarity=0.282 Sum_probs=55.1
Q ss_pred CCCCeEEEecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCC-------CCCeeEEEecCCC-CCC-c-ccEEEeec
Q 034578 22 NNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPT-------HEGVSHVGGDMFD-AIP-N-ADAVFMKV 89 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~-------~~rv~~~~~d~~~-~~p-~-~D~i~l~~ 89 (90)
.+..+|||||||+|.++..++++ +..+++++|+.++++.|++ .++++++.+|+.+ ++| + +|+|+..+
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~ 141 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEW 141 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECC
T ss_pred CCCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcc
Confidence 35679999999999999999997 6679999999447777764 2569999999988 566 3 99999753
No 140
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.22 E-value=1.9e-11 Score=91.59 Aligned_cols=80 Identities=16% Similarity=0.246 Sum_probs=64.2
Q ss_pred hHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHC-CCCeEEEeeh-HHHHHhCCC------------CCCeeEEEe
Q 034578 8 TMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSY-PHIKGINFDL-QHVIATAPT------------HEGVSHVGG 73 (90)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-p~~~~~a~~------------~~rv~~~~~ 73 (90)
..+.+++.+. ..+..+|||||||+|.++..+++.. |..+++++|+ +.+++.|++ ..+++++.+
T Consensus 709 Rle~LLelL~---~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqG 785 (950)
T 3htx_A 709 RVEYALKHIR---ESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDG 785 (950)
T ss_dssp HHHHHHHHHH---HSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEES
T ss_pred HHHHHHHHhc---ccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEEC
Confidence 3455566665 3457899999999999999999998 6679999999 999998854 257999999
Q ss_pred cCCC-CCC--cccEEEeecC
Q 034578 74 DMFD-AIP--NADAVFMKVA 90 (90)
Q Consensus 74 d~~~-~~p--~~D~i~l~~v 90 (90)
|+.+ +.+ .||+|++..+
T Consensus 786 Da~dLp~~d~sFDlVV~~eV 805 (950)
T 3htx_A 786 SILEFDSRLHDVDIGTCLEV 805 (950)
T ss_dssp CTTSCCTTSCSCCEEEEESC
T ss_pred chHhCCcccCCeeEEEEeCc
Confidence 9987 443 3999998653
No 141
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.22 E-value=2.1e-11 Score=82.19 Aligned_cols=79 Identities=18% Similarity=0.302 Sum_probs=64.8
Q ss_pred hhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-----CCeeEEEecCCC-C-
Q 034578 7 ITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-----EGVSHVGGDMFD-A- 78 (90)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-----~rv~~~~~d~~~-~- 78 (90)
.+.+.+++.+. ..+..++||+|||+|.++..+++++|..+++++|+ |.+++.|+++ +|++++.+|+.+ +
T Consensus 13 vLl~e~l~~L~---~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~ 89 (301)
T 1m6y_A 13 VMVREVIEFLK---PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADF 89 (301)
T ss_dssp TTHHHHHHHHC---CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHH
T ss_pred HHHHHHHHhcC---CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHH
Confidence 45667777776 55678999999999999999999999899999999 9999888652 689999999865 2
Q ss_pred -C-----CcccEEEee
Q 034578 79 -I-----PNADAVFMK 88 (90)
Q Consensus 79 -~-----p~~D~i~l~ 88 (90)
+ ..+|.|++.
T Consensus 90 ~l~~~g~~~~D~Vl~D 105 (301)
T 1m6y_A 90 LLKTLGIEKVDGILMD 105 (301)
T ss_dssp HHHHTTCSCEEEEEEE
T ss_pred HHHhcCCCCCCEEEEc
Confidence 1 248998863
No 142
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.22 E-value=1.1e-11 Score=77.35 Aligned_cols=82 Identities=12% Similarity=0.075 Sum_probs=60.2
Q ss_pred hhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC------CCeeEEEecCCCC
Q 034578 6 KITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH------EGVSHVGGDMFDA 78 (90)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~------~rv~~~~~d~~~~ 78 (90)
..+.+.+++.+......+..+|||+|||+|.++..++++ +..+++++|+ |.+++.++++ ++++++.+|+.+.
T Consensus 27 ~~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 105 (189)
T 3p9n_A 27 DRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAV 105 (189)
T ss_dssp HHHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHH
T ss_pred HHHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHH
Confidence 334445544443100135679999999999999988774 5678999999 9999988762 5899999998762
Q ss_pred ---C-C-cccEEEee
Q 034578 79 ---I-P-NADAVFMK 88 (90)
Q Consensus 79 ---~-p-~~D~i~l~ 88 (90)
+ + .+|+|++.
T Consensus 106 ~~~~~~~~fD~i~~~ 120 (189)
T 3p9n_A 106 VAAGTTSPVDLVLAD 120 (189)
T ss_dssp HHHCCSSCCSEEEEC
T ss_pred HhhccCCCccEEEEC
Confidence 3 2 39999975
No 143
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.22 E-value=3e-12 Score=78.41 Aligned_cols=73 Identities=15% Similarity=0.221 Sum_probs=58.8
Q ss_pred HHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-CCCeeEEEecCCCCCC--cccEEE
Q 034578 11 AFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-HEGVSHVGGDMFDAIP--NADAVF 86 (90)
Q Consensus 11 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-~~rv~~~~~d~~~~~p--~~D~i~ 86 (90)
.+++.++ ..+..+|||+|||+|.++..+++... +++++|+ +.+++.+++ .+++++..+| .+++ .+|+|+
T Consensus 8 ~~~~~~~---~~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~v~~~~~d--~~~~~~~~D~v~ 80 (170)
T 3i9f_A 8 EYLPNIF---EGKKGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVKEKFDSVITLSDP--KEIPDNSVDFIL 80 (170)
T ss_dssp TTHHHHH---SSCCEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHHHHCTTSEEESSG--GGSCTTCEEEEE
T ss_pred HHHHhcC---cCCCCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHHHhCCCcEEEeCC--CCCCCCceEEEE
Confidence 3445555 45667999999999999999999874 8999999 999988876 5789999999 3343 399999
Q ss_pred eecC
Q 034578 87 MKVA 90 (90)
Q Consensus 87 l~~v 90 (90)
+.++
T Consensus 81 ~~~~ 84 (170)
T 3i9f_A 81 FANS 84 (170)
T ss_dssp EESC
T ss_pred Eccc
Confidence 8753
No 144
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.22 E-value=2.1e-11 Score=81.81 Aligned_cols=65 Identities=15% Similarity=0.246 Sum_probs=55.3
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-----------CCCeeEEEecCCCCC---Cc-ccEEE
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-----------HEGVSHVGGDMFDAI---PN-ADAVF 86 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-----------~~rv~~~~~d~~~~~---p~-~D~i~ 86 (90)
++.+|||||||+|.++.++++..|..+++++|+ |.+++.|++ .+|++++.+|.++.+ +. ||+|+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 568999999999999999999878889999999 999988764 358999999988743 23 99998
Q ss_pred e
Q 034578 87 M 87 (90)
Q Consensus 87 l 87 (90)
+
T Consensus 163 ~ 163 (294)
T 3adn_A 163 S 163 (294)
T ss_dssp E
T ss_pred E
Confidence 7
No 145
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.21 E-value=2.5e-11 Score=81.63 Aligned_cols=80 Identities=23% Similarity=0.363 Sum_probs=64.8
Q ss_pred hhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCC-CCeEEEeeh-HHHHHhCCCC------CCeeEEEecCCCC
Q 034578 7 ITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYP-HIKGINFDL-QHVIATAPTH------EGVSHVGGDMFDA 78 (90)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-p~~~~~a~~~------~rv~~~~~d~~~~ 78 (90)
.....+++.+. ..+..+|||+|||+|.++..+++..+ ..+++++|+ |.+++.++++ .++++..+|+.+.
T Consensus 62 ~~~~~l~~~l~---~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~ 138 (317)
T 1dl5_A 62 SLMALFMEWVG---LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG 138 (317)
T ss_dssp HHHHHHHHHTT---CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC
T ss_pred HHHHHHHHhcC---CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhc
Confidence 45666777676 56678999999999999999999987 488999999 9999888752 5699999999873
Q ss_pred CC---cccEEEeec
Q 034578 79 IP---NADAVFMKV 89 (90)
Q Consensus 79 ~p---~~D~i~l~~ 89 (90)
++ .+|+|++..
T Consensus 139 ~~~~~~fD~Iv~~~ 152 (317)
T 1dl5_A 139 VPEFSPYDVIFVTV 152 (317)
T ss_dssp CGGGCCEEEEEECS
T ss_pred cccCCCeEEEEEcC
Confidence 32 389998753
No 146
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.21 E-value=9.1e-12 Score=83.17 Aligned_cols=72 Identities=17% Similarity=0.245 Sum_probs=59.6
Q ss_pred hhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCC--CeEEEeeh-HHHHHhCCCC--CCeeEEEecCCC-CCC
Q 034578 7 ITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPH--IKGINFDL-QHVIATAPTH--EGVSHVGGDMFD-AIP 80 (90)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~--~~~~~~D~-p~~~~~a~~~--~rv~~~~~d~~~-~~p 80 (90)
.+.+.+++.+. ..+..+|||||||+|.++..++++.+. .+++++|+ +.+++.++++ ++++++.+|+++ +++
T Consensus 29 ~i~~~iv~~~~---~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~~~~ 105 (279)
T 3uzu_A 29 GVIDAIVAAIR---PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDALTFDFG 105 (279)
T ss_dssp HHHHHHHHHHC---CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGGCCGG
T ss_pred HHHHHHHHhcC---CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhcCChh
Confidence 45677777776 566789999999999999999998654 66999999 9999988764 789999999987 554
Q ss_pred c
Q 034578 81 N 81 (90)
Q Consensus 81 ~ 81 (90)
.
T Consensus 106 ~ 106 (279)
T 3uzu_A 106 S 106 (279)
T ss_dssp G
T ss_pred H
Confidence 4
No 147
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.21 E-value=1.3e-11 Score=81.36 Aligned_cols=77 Identities=14% Similarity=0.093 Sum_probs=59.7
Q ss_pred hhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC----------CCCeeEEEecC
Q 034578 7 ITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT----------HEGVSHVGGDM 75 (90)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~----------~~rv~~~~~d~ 75 (90)
...+.+.+.++ ..+..+|||||||+|.++..++++. .+++++|+ |.+++.+++ ..++.+..+|+
T Consensus 44 ~~~~~l~~~l~---~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~ 118 (293)
T 3thr_A 44 EYKAWLLGLLR---QHGCHRVLDVACGTGVDSIMLVEEG--FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANW 118 (293)
T ss_dssp HHHHHHHHHHH---HTTCCEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCG
T ss_pred HHHHHHHHHhc---ccCCCEEEEecCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecCh
Confidence 34455555555 3456799999999999999999984 48999999 999988854 15788999998
Q ss_pred CC-C---CC--cccEEEee
Q 034578 76 FD-A---IP--NADAVFMK 88 (90)
Q Consensus 76 ~~-~---~p--~~D~i~l~ 88 (90)
.+ + ++ .+|+|++.
T Consensus 119 ~~~~~~~~~~~~fD~V~~~ 137 (293)
T 3thr_A 119 LTLDKDVPAGDGFDAVICL 137 (293)
T ss_dssp GGHHHHSCCTTCEEEEEEC
T ss_pred hhCccccccCCCeEEEEEc
Confidence 77 4 34 39999985
No 148
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.20 E-value=9.5e-12 Score=79.92 Aligned_cols=68 Identities=13% Similarity=0.269 Sum_probs=57.4
Q ss_pred CCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-------CCeeEEEecCCCC---C--C-cccEEEe
Q 034578 22 NNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-------EGVSHVGGDMFDA---I--P-NADAVFM 87 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-------~rv~~~~~d~~~~---~--p-~~D~i~l 87 (90)
.+..+|||+|||+|.++..+++.+|..+++++|+ |.+++.++++ ++++++.+|+.+. . + .+|+|++
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 132 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFI 132 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEE
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEE
Confidence 3467999999999999999999999999999999 9998888752 5799999999773 2 2 3999987
Q ss_pred ec
Q 034578 88 KV 89 (90)
Q Consensus 88 ~~ 89 (90)
..
T Consensus 133 ~~ 134 (233)
T 2gpy_A 133 DA 134 (233)
T ss_dssp EG
T ss_pred CC
Confidence 53
No 149
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.20 E-value=8.9e-12 Score=80.27 Aligned_cols=64 Identities=14% Similarity=0.158 Sum_probs=52.3
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-----CCCeeEEEecCCC---CCCc--ccEEEe
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-----HEGVSHVGGDMFD---AIPN--ADAVFM 87 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-----~~rv~~~~~d~~~---~~p~--~D~i~l 87 (90)
+..+|||||||+|.++..+++..+ .+++++|+ |.+++.|++ ..+++++.+|+.+ +++. +|+|++
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~ 134 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILY 134 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCE-EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEE
T ss_pred CCCeEEEEeccCCHHHHHHHhcCC-CeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEE
Confidence 467999999999999999966443 48999999 999988865 2679999999865 3543 999987
No 150
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.20 E-value=5.1e-12 Score=80.54 Aligned_cols=67 Identities=13% Similarity=0.239 Sum_probs=56.1
Q ss_pred CCCCeEEEecCCchHHHHHHHHHCC-CCeEEEeeh-HHHHHhCCC-------CCCeeEEEecCCCCC--------CcccE
Q 034578 22 NNIRSMVDVGGGTGTVLAEIVKSYP-HIKGINFDL-QHVIATAPT-------HEGVSHVGGDMFDAI--------PNADA 84 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-p~~~~~a~~-------~~rv~~~~~d~~~~~--------p~~D~ 84 (90)
.+..+|||+|||+|..+..+++.+| +.+++++|+ |.+++.+++ .++++++.+|+.+.+ ..+|+
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~ 136 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDF 136 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSE
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCE
Confidence 3568999999999999999999998 899999999 999888764 257999999987622 23899
Q ss_pred EEee
Q 034578 85 VFMK 88 (90)
Q Consensus 85 i~l~ 88 (90)
|++.
T Consensus 137 v~~d 140 (223)
T 3duw_A 137 IFID 140 (223)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9864
No 151
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.20 E-value=1e-11 Score=79.37 Aligned_cols=67 Identities=13% Similarity=0.262 Sum_probs=55.8
Q ss_pred CCCeEEEecCCchHHHHHHHHHCC-CCeEEEeeh-HHHHHhCCC-------CCCeeEEEecCCC---CCC------cccE
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYP-HIKGINFDL-QHVIATAPT-------HEGVSHVGGDMFD---AIP------NADA 84 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-p~~~~~a~~-------~~rv~~~~~d~~~---~~p------~~D~ 84 (90)
+..+|||+|||+|..+..+++..| ..+++++|+ |.+++.|++ .++++++.+|+.+ .++ .+|+
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~ 137 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDM 137 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEE
Confidence 468999999999999999999875 889999999 999998876 2579999999754 232 3999
Q ss_pred EEeec
Q 034578 85 VFMKV 89 (90)
Q Consensus 85 i~l~~ 89 (90)
|++..
T Consensus 138 V~~d~ 142 (221)
T 3u81_A 138 VFLDH 142 (221)
T ss_dssp EEECS
T ss_pred EEEcC
Confidence 98753
No 152
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.20 E-value=6.6e-11 Score=80.65 Aligned_cols=77 Identities=14% Similarity=0.208 Sum_probs=60.0
Q ss_pred HHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCC-------CCCeeEEEecCCC-CCC
Q 034578 9 MKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPT-------HEGVSHVGGDMFD-AIP 80 (90)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~-------~~rv~~~~~d~~~-~~p 80 (90)
.+.+++.+. ..+..+|||||||+|.++..++++ +..+++++|+.++++.+++ .++++++.+|+.+ ++|
T Consensus 39 ~~~i~~~l~---~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~ 114 (348)
T 2y1w_A 39 QRAILQNHT---DFKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP 114 (348)
T ss_dssp HHHHHHTGG---GTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCS
T ss_pred HHHHHhccc---cCCcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCCCC
Confidence 455666665 445689999999999999999885 6679999999336666654 2689999999987 555
Q ss_pred c-ccEEEeec
Q 034578 81 N-ADAVFMKV 89 (90)
Q Consensus 81 ~-~D~i~l~~ 89 (90)
+ +|+|+...
T Consensus 115 ~~~D~Ivs~~ 124 (348)
T 2y1w_A 115 EQVDIIISEP 124 (348)
T ss_dssp SCEEEEEECC
T ss_pred CceeEEEEeC
Confidence 5 99999753
No 153
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.20 E-value=5.6e-12 Score=81.19 Aligned_cols=64 Identities=23% Similarity=0.324 Sum_probs=54.4
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-------CCeeEEEecCCCCCC--cccEEEee
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-------EGVSHVGGDMFDAIP--NADAVFMK 88 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-------~rv~~~~~d~~~~~p--~~D~i~l~ 88 (90)
+..+|||+|||+|.++..+++.. .+++++|+ |.+++.++++ ++++++.+|+.+..+ .+|+|++.
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~ 151 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG--MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLS 151 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEEC
T ss_pred CCCEEEECccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEEC
Confidence 46899999999999999999974 88999999 9999988752 489999999987323 39999975
No 154
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.20 E-value=1.8e-10 Score=75.17 Aligned_cols=85 Identities=13% Similarity=0.175 Sum_probs=65.0
Q ss_pred chhhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHH-CCCCeEEEeeh-HHHH----HhCCCCCCeeEEEecCCC
Q 034578 4 TTKITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKS-YPHIKGINFDL-QHVI----ATAPTHEGVSHVGGDMFD 77 (90)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~-~p~~~~~~~D~-p~~~----~~a~~~~rv~~~~~d~~~ 77 (90)
.....+..++..++...+.+..+|||+|||+|.++..+++. .|..+++++|+ |.++ +.+++..++.++.+|...
T Consensus 57 ~~skla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~ 136 (232)
T 3id6_C 57 FRSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARF 136 (232)
T ss_dssp TTCHHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTC
T ss_pred HHHHHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEccccc
Confidence 45567788888776212556789999999999999999987 47889999999 8764 444445789999999876
Q ss_pred C-----CC-cccEEEee
Q 034578 78 A-----IP-NADAVFMK 88 (90)
Q Consensus 78 ~-----~p-~~D~i~l~ 88 (90)
+ ++ .+|+|++.
T Consensus 137 ~~~~~~~~~~~D~I~~d 153 (232)
T 3id6_C 137 PQSYKSVVENVDVLYVD 153 (232)
T ss_dssp GGGTTTTCCCEEEEEEC
T ss_pred chhhhccccceEEEEec
Confidence 2 22 38999864
No 155
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.20 E-value=2.3e-11 Score=83.64 Aligned_cols=80 Identities=16% Similarity=0.151 Sum_probs=64.7
Q ss_pred hhhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-------CCeeEEEecCC
Q 034578 5 TKITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-------EGVSHVGGDMF 76 (90)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-------~rv~~~~~d~~ 76 (90)
...++..++... + .+..+|||+|||+|.+++.+++..+..+++++|+ |.+++.|+++ +++++..+|+.
T Consensus 203 ~~~la~~l~~~~-~---~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~ 278 (373)
T 3tm4_A 203 KASIANAMIELA-E---LDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDAT 278 (373)
T ss_dssp CHHHHHHHHHHH-T---CCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGG
T ss_pred cHHHHHHHHHhh-c---CCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChh
Confidence 445566666554 3 3567899999999999999999988778999999 9999988762 58999999998
Q ss_pred C-CCC--cccEEEee
Q 034578 77 D-AIP--NADAVFMK 88 (90)
Q Consensus 77 ~-~~p--~~D~i~l~ 88 (90)
+ +.+ .+|+|+++
T Consensus 279 ~~~~~~~~fD~Ii~n 293 (373)
T 3tm4_A 279 QLSQYVDSVDFAISN 293 (373)
T ss_dssp GGGGTCSCEEEEEEE
T ss_pred hCCcccCCcCEEEEC
Confidence 8 443 39999984
No 156
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.19 E-value=6.3e-12 Score=81.95 Aligned_cols=67 Identities=13% Similarity=0.266 Sum_probs=56.4
Q ss_pred CCCCeEEEecCCchHHHHHHHHHCC-CCeEEEeeh-HHHHHhCCC-------CCCeeEEEecCCC---CCC---cccEEE
Q 034578 22 NNIRSMVDVGGGTGTVLAEIVKSYP-HIKGINFDL-QHVIATAPT-------HEGVSHVGGDMFD---AIP---NADAVF 86 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-p~~~~~a~~-------~~rv~~~~~d~~~---~~p---~~D~i~ 86 (90)
.+..+|||||||+|..+..+++.+| ..+++++|+ |.+++.|++ .++++++.+|+.+ .++ .||+|+
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~ 141 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIF 141 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEE
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEE
Confidence 3568999999999999999999998 899999999 999988865 2589999999865 222 499998
Q ss_pred ee
Q 034578 87 MK 88 (90)
Q Consensus 87 l~ 88 (90)
+.
T Consensus 142 ~d 143 (248)
T 3tfw_A 142 ID 143 (248)
T ss_dssp EC
T ss_pred EC
Confidence 64
No 157
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.19 E-value=7.5e-11 Score=79.67 Aligned_cols=77 Identities=21% Similarity=0.307 Sum_probs=61.3
Q ss_pred HHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHH-CCCCeEEEeeh-HHHHHhCCCC-----------------CCee
Q 034578 9 MKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKS-YPHIKGINFDL-QHVIATAPTH-----------------EGVS 69 (90)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~-~p~~~~~~~D~-p~~~~~a~~~-----------------~rv~ 69 (90)
...+++.++ ..+..+|||+|||+|.++..+++. .|..+++++|+ |.+++.|+++ ++++
T Consensus 94 ~~~~l~~l~---~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~ 170 (336)
T 2b25_A 94 INMILSMMD---INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVD 170 (336)
T ss_dssp HHHHHHHHT---CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEE
T ss_pred HHHHHHhcC---CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceE
Confidence 445566665 556789999999999999999998 58899999999 9988887651 5799
Q ss_pred EEEecCCCC---CCc--ccEEEee
Q 034578 70 HVGGDMFDA---IPN--ADAVFMK 88 (90)
Q Consensus 70 ~~~~d~~~~---~p~--~D~i~l~ 88 (90)
++.+|+.+. ++. +|+|++.
T Consensus 171 ~~~~d~~~~~~~~~~~~fD~V~~~ 194 (336)
T 2b25_A 171 FIHKDISGATEDIKSLTFDAVALD 194 (336)
T ss_dssp EEESCTTCCC-------EEEEEEC
T ss_pred EEECChHHcccccCCCCeeEEEEC
Confidence 999999873 343 8999874
No 158
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.19 E-value=4.6e-11 Score=84.02 Aligned_cols=79 Identities=11% Similarity=0.258 Sum_probs=61.4
Q ss_pred hHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhC-------CC--------CCCeeEE
Q 034578 8 TMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATA-------PT--------HEGVSHV 71 (90)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a-------~~--------~~rv~~~ 71 (90)
.+..+++.+. ..+..+|||||||+|.++..+++.++..+++++|+ +.+++.| ++ ..+++++
T Consensus 230 ~v~~ml~~l~---l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i 306 (433)
T 1u2z_A 230 FLSDVYQQCQ---LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFS 306 (433)
T ss_dssp HHHHHHHHTT---CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEE
T ss_pred HHHHHHHhcC---CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEE
Confidence 4556666666 56678999999999999999999988889999999 8887776 43 2589999
Q ss_pred EecCC-CC--C----CcccEEEeec
Q 034578 72 GGDMF-DA--I----PNADAVFMKV 89 (90)
Q Consensus 72 ~~d~~-~~--~----p~~D~i~l~~ 89 (90)
.+|-+ .+ + ..||+|++++
T Consensus 307 ~gD~~~~~~~~~~~~~~FDvIvvn~ 331 (433)
T 1u2z_A 307 LKKSFVDNNRVAELIPQCDVILVNN 331 (433)
T ss_dssp ESSCSTTCHHHHHHGGGCSEEEECC
T ss_pred EcCccccccccccccCCCCEEEEeC
Confidence 87544 32 2 2399999863
No 159
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.19 E-value=4.9e-11 Score=76.35 Aligned_cols=63 Identities=24% Similarity=0.359 Sum_probs=53.6
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-----CCCeeEEEecCCC-CCCc-ccEEEee
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-----HEGVSHVGGDMFD-AIPN-ADAVFMK 88 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-----~~rv~~~~~d~~~-~~p~-~D~i~l~ 88 (90)
+..+|||+|||+|.++..+++. .+++++|+ |.+++.+++ ..+++++.+|+.+ +.+. +|+|++.
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~ 103 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELPEPVDAITIL 103 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCSSCEEEEEEC
T ss_pred CCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCCCCcCEEEEe
Confidence 3579999999999999999887 78999999 999988875 2579999999977 4554 9999875
No 160
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.18 E-value=5e-11 Score=74.88 Aligned_cols=64 Identities=27% Similarity=0.342 Sum_probs=54.5
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-CCeeEEEecCCCCCCc-ccEEEee
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-EGVSHVGGDMFDAIPN-ADAVFMK 88 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-~rv~~~~~d~~~~~p~-~D~i~l~ 88 (90)
+..+|||+|||+|.++..+++. +..+++++|+ |.+++.++++ .+++++.+|+.+ +|. +|+|+++
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~-~~~~~D~v~~~ 117 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCGGVNFMVADVSE-ISGKYDTWIMN 117 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGG-CCCCEEEEEEC
T ss_pred CCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcCCCEEEECcHHH-CCCCeeEEEEC
Confidence 5679999999999999999987 5567999999 9999988764 389999999977 444 9999985
No 161
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.18 E-value=9.6e-12 Score=79.26 Aligned_cols=66 Identities=17% Similarity=0.201 Sum_probs=55.8
Q ss_pred CCCeEEEecCCchHHHHHHHHHCC-CCeEEEeeh-HHHHHhCCC-------CCCeeEEEecCCCC---C------CcccE
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYP-HIKGINFDL-QHVIATAPT-------HEGVSHVGGDMFDA---I------PNADA 84 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-p~~~~~a~~-------~~rv~~~~~d~~~~---~------p~~D~ 84 (90)
+..+|||+|||+|..+..+++.+| ..+++++|+ |.+++.+++ .++++++.+|..+. + ..+|+
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDL 143 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccE
Confidence 467999999999999999999988 899999999 999888765 25799999998662 2 34999
Q ss_pred EEee
Q 034578 85 VFMK 88 (90)
Q Consensus 85 i~l~ 88 (90)
|++.
T Consensus 144 v~~~ 147 (225)
T 3tr6_A 144 IYID 147 (225)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9864
No 162
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.18 E-value=5.5e-11 Score=78.82 Aligned_cols=65 Identities=22% Similarity=0.114 Sum_probs=55.6
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-------CCCeeEEEecCCCCC-Cc-ccEEEee
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-------HEGVSHVGGDMFDAI-PN-ADAVFMK 88 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-------~~rv~~~~~d~~~~~-p~-~D~i~l~ 88 (90)
+..+|||+|||+|.++..+++..+. +++++|+ |.+++.+++ .++++++.+|+++.. +. +|+|++.
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~ 199 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMG 199 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEEC
T ss_pred CCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEEC
Confidence 4689999999999999999999876 8999999 999998875 246999999998843 33 9999885
No 163
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.18 E-value=6.9e-12 Score=79.45 Aligned_cols=65 Identities=18% Similarity=0.217 Sum_probs=52.9
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC--------CCeeEEEecCCCCC-----Cc-ccEEEe
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH--------EGVSHVGGDMFDAI-----PN-ADAVFM 87 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~--------~rv~~~~~d~~~~~-----p~-~D~i~l 87 (90)
+..+|||+|||+|.++..++++.. .+++++|+ |.+++.++++ ++++++.+|+.+.+ .. +|+|++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 131 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQA-KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFL 131 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHccC-CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEE
Confidence 357999999999999999887643 68999999 9999988752 58999999987621 25 899987
Q ss_pred e
Q 034578 88 K 88 (90)
Q Consensus 88 ~ 88 (90)
.
T Consensus 132 ~ 132 (201)
T 2ift_A 132 D 132 (201)
T ss_dssp C
T ss_pred C
Confidence 5
No 164
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.17 E-value=1.1e-10 Score=72.15 Aligned_cols=64 Identities=22% Similarity=0.231 Sum_probs=55.1
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-CCeeEEEecCCC-CCC-c-ccEEEee
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-EGVSHVGGDMFD-AIP-N-ADAVFMK 88 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-~rv~~~~~d~~~-~~p-~-~D~i~l~ 88 (90)
+..+|||+|||+|.++..+++. ..+++++|+ |.+++.++++ .+++++.+|+.+ +++ . +|+|++.
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~ 114 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSA 114 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEEC
T ss_pred CCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEEC
Confidence 5679999999999999999997 568999999 9999888763 679999999987 554 3 9999985
No 165
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.17 E-value=3.9e-11 Score=75.35 Aligned_cols=68 Identities=15% Similarity=0.148 Sum_probs=53.7
Q ss_pred CCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-----CCCeeEEEecCCC-CCC-c-ccEEEeec
Q 034578 21 FNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-----HEGVSHVGGDMFD-AIP-N-ADAVFMKV 89 (90)
Q Consensus 21 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-----~~rv~~~~~d~~~-~~p-~-~D~i~l~~ 89 (90)
..+..+|||+|||+|.++..++.. +..+++++|+ +.+++.+++ ..+++++.+|+.+ +++ . +|+|++..
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 97 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVE-DGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYG 97 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHH-TTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECS
T ss_pred cCCCCEEEEECCCCCHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcC
Confidence 345689999999999986555544 5679999999 999988875 3679999999987 554 3 99999754
No 166
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.17 E-value=5.3e-11 Score=82.68 Aligned_cols=83 Identities=17% Similarity=0.116 Sum_probs=67.0
Q ss_pred cchhhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCC-----------------------------------
Q 034578 3 CTTKITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPH----------------------------------- 47 (90)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~----------------------------------- 47 (90)
.+.+.++..++.... +.+...|+|.+||+|.++++.+....+
T Consensus 184 pl~e~lAa~ll~l~~---~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~ 260 (393)
T 3k0b_A 184 PIKETMAAALVLLTS---WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANY 260 (393)
T ss_dssp SCCHHHHHHHHHHSC---CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCT
T ss_pred CCcHHHHHHHHHHhC---CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcc
Confidence 345667888888777 556789999999999999998876543
Q ss_pred ---CeEEEeeh-HHHHHhCCC-------CCCeeEEEecCCC-CCCc-ccEEEee
Q 034578 48 ---IKGINFDL-QHVIATAPT-------HEGVSHVGGDMFD-AIPN-ADAVFMK 88 (90)
Q Consensus 48 ---~~~~~~D~-p~~~~~a~~-------~~rv~~~~~d~~~-~~p~-~D~i~l~ 88 (90)
.+++++|+ |.+++.|++ .+++++..+|+++ +.+. +|+|+++
T Consensus 261 ~~~~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~N 314 (393)
T 3k0b_A 261 DQPLNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVAN 314 (393)
T ss_dssp TCCCCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEEC
T ss_pred cCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEEC
Confidence 57999999 999998876 2469999999988 3444 9999976
No 167
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.17 E-value=6e-11 Score=81.79 Aligned_cols=77 Identities=9% Similarity=0.064 Sum_probs=62.7
Q ss_pred hhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHC-CCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCCCCC--c
Q 034578 6 KITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSY-PHIKGINFDL-QHVIATAPTHEGVSHVGGDMFDAIP--N 81 (90)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~~~p--~ 81 (90)
+.+++.+++.+. ..+..+|||+|||+|.++..+++++ +..+++++|+ |.+++.| .+++++.+|+++..+ .
T Consensus 25 ~~l~~~~~~~~~---~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---~~~~~~~~D~~~~~~~~~ 98 (421)
T 2ih2_A 25 PEVVDFMVSLAE---APRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---PWAEGILADFLLWEPGEA 98 (421)
T ss_dssp HHHHHHHHHHCC---CCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---TTEEEEESCGGGCCCSSC
T ss_pred HHHHHHHHHhhc---cCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---CCCcEEeCChhhcCccCC
Confidence 345666777665 3345699999999999999999987 7789999999 9988777 689999999988433 3
Q ss_pred ccEEEee
Q 034578 82 ADAVFMK 88 (90)
Q Consensus 82 ~D~i~l~ 88 (90)
+|+|+.+
T Consensus 99 fD~Ii~N 105 (421)
T 2ih2_A 99 FDLILGN 105 (421)
T ss_dssp EEEEEEC
T ss_pred CCEEEEC
Confidence 9999984
No 168
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.17 E-value=4.5e-11 Score=79.66 Aligned_cols=67 Identities=15% Similarity=0.199 Sum_probs=54.4
Q ss_pred CCeEEEecCCchH----HHHHHHHHCC----CCeEEEeeh-HHHHHhCCCC-----------------------------
Q 034578 24 IRSMVDVGGGTGT----VLAEIVKSYP----HIKGINFDL-QHVIATAPTH----------------------------- 65 (90)
Q Consensus 24 ~~~vlDvG~G~G~----~~~~l~~~~p----~~~~~~~D~-p~~~~~a~~~----------------------------- 65 (90)
..+|+|+|||||. ++..+++..| +.++++.|+ +.|++.|++.
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 4689999999998 6666777655 468999999 9999988642
Q ss_pred --------CCeeEEEecCCC-CCC---cccEEEeecC
Q 034578 66 --------EGVSHVGGDMFD-AIP---NADAVFMKVA 90 (90)
Q Consensus 66 --------~rv~~~~~d~~~-~~p---~~D~i~l~~v 90 (90)
.+++|..+|+.+ ++| .+|+|++++|
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnv 222 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNV 222 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSS
T ss_pred eeechhhcccCeEEecccCCCCCCcCCCeeEEEECCc
Confidence 268999999998 454 3999999875
No 169
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.17 E-value=4.7e-11 Score=79.46 Aligned_cols=75 Identities=11% Similarity=0.068 Sum_probs=59.9
Q ss_pred hhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC---CCCeeEEEecCCC-CCC-
Q 034578 7 ITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT---HEGVSHVGGDMFD-AIP- 80 (90)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~---~~rv~~~~~d~~~-~~p- 80 (90)
.+++.+++... ..+. +|||||||+|.++..++++. .+++++|+ +.+++.+++ .++++++.+|+++ +++
T Consensus 34 ~i~~~Iv~~~~---~~~~-~VLEIG~G~G~lt~~L~~~~--~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~ 107 (271)
T 3fut_A 34 AHLRRIVEAAR---PFTG-PVFEVGPGLGALTRALLEAG--AEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEE 107 (271)
T ss_dssp HHHHHHHHHHC---CCCS-CEEEECCTTSHHHHHHHHTT--CCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGG
T ss_pred HHHHHHHHhcC---CCCC-eEEEEeCchHHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChhh
Confidence 45677777777 5556 99999999999999999985 67999999 888887764 3689999999987 454
Q ss_pred --cccEEEe
Q 034578 81 --NADAVFM 87 (90)
Q Consensus 81 --~~D~i~l 87 (90)
.+|.|+.
T Consensus 108 ~~~~~~iv~ 116 (271)
T 3fut_A 108 VPQGSLLVA 116 (271)
T ss_dssp SCTTEEEEE
T ss_pred ccCccEEEe
Confidence 3566654
No 170
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.16 E-value=8.3e-11 Score=77.14 Aligned_cols=78 Identities=15% Similarity=0.259 Sum_probs=63.0
Q ss_pred hHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHH-CCCCeEEEeeh-HHHHHhCCC---------CCCeeEEEecCC
Q 034578 8 TMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKS-YPHIKGINFDL-QHVIATAPT---------HEGVSHVGGDMF 76 (90)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~-~p~~~~~~~D~-p~~~~~a~~---------~~rv~~~~~d~~ 76 (90)
.+..+++.++ ..+..+|||+|||+|.++..+++. .|..+++++|+ |.+++.+++ .++++++.+|+.
T Consensus 87 ~~~~i~~~~~---~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~ 163 (280)
T 1i9g_A 87 DAAQIVHEGD---IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLA 163 (280)
T ss_dssp HHHHHHHHTT---CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGG
T ss_pred HHHHHHHHcC---CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchH
Confidence 4456666666 566789999999999999999996 57899999999 998887764 247999999998
Q ss_pred C-CCC-c-ccEEEee
Q 034578 77 D-AIP-N-ADAVFMK 88 (90)
Q Consensus 77 ~-~~p-~-~D~i~l~ 88 (90)
+ +++ . +|+|++.
T Consensus 164 ~~~~~~~~~D~v~~~ 178 (280)
T 1i9g_A 164 DSELPDGSVDRAVLD 178 (280)
T ss_dssp GCCCCTTCEEEEEEE
T ss_pred hcCCCCCceeEEEEC
Confidence 7 443 2 8999874
No 171
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.16 E-value=1.5e-10 Score=73.95 Aligned_cols=67 Identities=15% Similarity=0.211 Sum_probs=55.5
Q ss_pred CCCCCeEEEecCC-chHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-----CCeeEEEecC--CCCCC-c-ccEEEee
Q 034578 21 FNNIRSMVDVGGG-TGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-----EGVSHVGGDM--FDAIP-N-ADAVFMK 88 (90)
Q Consensus 21 ~~~~~~vlDvG~G-~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-----~rv~~~~~d~--~~~~p-~-~D~i~l~ 88 (90)
..+..+|||+||| +|.++..+++.. ..+++++|+ |.+++.++++ .+++++.+|+ +.+++ . +|+|+++
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~n 130 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSA 130 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEEC
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEEC
Confidence 3456899999999 999999999987 789999999 9999988752 3799999996 34454 3 9999975
No 172
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.16 E-value=6.4e-11 Score=80.15 Aligned_cols=67 Identities=22% Similarity=0.330 Sum_probs=54.1
Q ss_pred CCCCeEEEecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCC-------CCCeeEEEecCCC-CCC-c-ccEEEeec
Q 034578 22 NNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPT-------HEGVSHVGGDMFD-AIP-N-ADAVFMKV 89 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~-------~~rv~~~~~d~~~-~~p-~-~D~i~l~~ 89 (90)
.+..+|||||||+|.++..++++ +..+++++|+.++++.+++ .++++++.+|+.+ ++| + +|+|+..+
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~ 113 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEW 113 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECC
T ss_pred cCCCEEEEecCccHHHHHHHHHC-CCCEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeC
Confidence 35679999999999999999886 5568999999547776654 2679999999987 566 3 99999753
No 173
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.16 E-value=7e-11 Score=78.15 Aligned_cols=68 Identities=19% Similarity=0.096 Sum_probs=58.0
Q ss_pred CCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC------CCeeEEEecCCCC-CC-cccEEEee
Q 034578 21 FNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH------EGVSHVGGDMFDA-IP-NADAVFMK 88 (90)
Q Consensus 21 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~------~rv~~~~~d~~~~-~p-~~D~i~l~ 88 (90)
+.+..+|||+|||+|.++..+++..+..+++++|+ |.+++.++++ .+++++.+|+.+. .+ .+|+|++.
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~~~~~D~Vi~d 193 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELKDVADRVIMG 193 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCCTTCEEEEEEC
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCccCCceEEEEC
Confidence 45678999999999999999999998889999999 9999988752 5789999999874 22 38999875
No 174
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.16 E-value=8.6e-11 Score=80.91 Aligned_cols=77 Identities=17% Similarity=0.237 Sum_probs=58.6
Q ss_pred HHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCC-------CCCeeEEEecCCC-CCC
Q 034578 9 MKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPT-------HEGVSHVGGDMFD-AIP 80 (90)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~-------~~rv~~~~~d~~~-~~p 80 (90)
.+.+.+... ..+..+|||||||+|.++..++++. ..+++++|+..+++.+++ .++++++.+|+.+ ++|
T Consensus 52 ~~~i~~~~~---~~~~~~VLDlGcGtG~ls~~la~~g-~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 127 (376)
T 3r0q_C 52 FNAVFQNKH---HFEGKTVLDVGTGSGILAIWSAQAG-ARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDISLP 127 (376)
T ss_dssp HHHHHTTTT---TTTTCEEEEESCTTTHHHHHHHHTT-CSEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS
T ss_pred HHHHHhccc---cCCCCEEEEeccCcCHHHHHHHhcC-CCEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcCcC
Confidence 344444444 4567899999999999999999973 348999998666666654 2679999999987 555
Q ss_pred c-ccEEEeec
Q 034578 81 N-ADAVFMKV 89 (90)
Q Consensus 81 ~-~D~i~l~~ 89 (90)
+ +|+|++..
T Consensus 128 ~~~D~Iv~~~ 137 (376)
T 3r0q_C 128 EKVDVIISEW 137 (376)
T ss_dssp SCEEEEEECC
T ss_pred CcceEEEEcC
Confidence 5 99999743
No 175
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.16 E-value=1.2e-10 Score=75.53 Aligned_cols=66 Identities=12% Similarity=0.330 Sum_probs=53.8
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC--------------CCCeeEEEecCCCC----CCc--
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT--------------HEGVSHVGGDMFDA----IPN-- 81 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~--------------~~rv~~~~~d~~~~----~p~-- 81 (90)
+..+|||+|||+|.++..+++.+|..+++++|+ +.+++.+++ ..+++++.+|+++. ++.
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 457899999999999999999999999999999 888876642 25799999999863 322
Q ss_pred ccEEEee
Q 034578 82 ADAVFMK 88 (90)
Q Consensus 82 ~D~i~l~ 88 (90)
+|.|++.
T Consensus 129 ~d~v~~~ 135 (246)
T 2vdv_E 129 LSKMFFC 135 (246)
T ss_dssp EEEEEEE
T ss_pred cCEEEEE
Confidence 6777653
No 176
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.16 E-value=8.2e-12 Score=76.09 Aligned_cols=80 Identities=15% Similarity=0.124 Sum_probs=60.0
Q ss_pred hhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC----C-CeeEEEecCCCCC
Q 034578 6 KITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH----E-GVSHVGGDMFDAI 79 (90)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~----~-rv~~~~~d~~~~~ 79 (90)
..+.+.+++.+.. .+.+..+|||+|||+|.++..++++.+. ++++|+ |.+++.++++ + +++++.+|+.+.+
T Consensus 25 ~~~~~~~~~~~~~-~~~~~~~vLD~GcG~G~~~~~l~~~~~~--v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~ 101 (171)
T 1ws6_A 25 VRLRKALFDYLRL-RYPRRGRFLDPFAGSGAVGLEAASEGWE--AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFL 101 (171)
T ss_dssp HHHHHHHHHHHHH-HCTTCCEEEEETCSSCHHHHHHHHTTCE--EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHH
T ss_pred HHHHHHHHHHHHh-hccCCCeEEEeCCCcCHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHH
Confidence 3444555555441 0225679999999999999999998765 999999 9999988762 2 7999999987632
Q ss_pred C-------cccEEEee
Q 034578 80 P-------NADAVFMK 88 (90)
Q Consensus 80 p-------~~D~i~l~ 88 (90)
+ .+|+|++.
T Consensus 102 ~~~~~~~~~~D~i~~~ 117 (171)
T 1ws6_A 102 PEAKAQGERFTVAFMA 117 (171)
T ss_dssp HHHHHTTCCEEEEEEC
T ss_pred HhhhccCCceEEEEEC
Confidence 2 48999876
No 177
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.16 E-value=5.5e-11 Score=82.35 Aligned_cols=82 Identities=18% Similarity=0.189 Sum_probs=65.9
Q ss_pred chhhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCC------------------------------------
Q 034578 4 TTKITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPH------------------------------------ 47 (90)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~------------------------------------ 47 (90)
+.+.++..++.... +.+..+|||.+||+|.++++++....+
T Consensus 179 l~e~lAa~ll~~~~---~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~ 255 (385)
T 3ldu_A 179 IRETLAAGLIYLTP---WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNE 255 (385)
T ss_dssp CCHHHHHHHHHTSC---CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCS
T ss_pred CcHHHHHHHHHhhC---CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhcc
Confidence 45567777887777 566789999999999999999876432
Q ss_pred --CeEEEeeh-HHHHHhCCCC-------CCeeEEEecCCC-CCCc-ccEEEee
Q 034578 48 --IKGINFDL-QHVIATAPTH-------EGVSHVGGDMFD-AIPN-ADAVFMK 88 (90)
Q Consensus 48 --~~~~~~D~-p~~~~~a~~~-------~rv~~~~~d~~~-~~p~-~D~i~l~ 88 (90)
.+++++|+ |.+++.|+++ +++++..+|+.+ +.+. +|+|+++
T Consensus 256 ~~~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~N 308 (385)
T 3ldu_A 256 SKFKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITN 308 (385)
T ss_dssp CCCCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEEC
T ss_pred CCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEEC
Confidence 67999999 9999998762 479999999988 3444 9999874
No 178
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.15 E-value=1e-10 Score=73.59 Aligned_cols=64 Identities=17% Similarity=0.226 Sum_probs=53.2
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC----C-CeeEEEecCCCCCC-cccEEEee
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH----E-GVSHVGGDMFDAIP-NADAVFMK 88 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~----~-rv~~~~~d~~~~~p-~~D~i~l~ 88 (90)
+..+|||+|||+|.++..+++.. ..+++++|+ |.+++.++++ + +++++.+|+.+ ++ .+|+|+++
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~D~v~~~ 119 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLG-AKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSE-FNSRVDIVIMN 119 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGG-CCCCCSEEEEC
T ss_pred CcCEEEEeeCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHH-cCCCCCEEEEc
Confidence 46799999999999999999873 347999999 9999887652 2 79999999977 34 49999875
No 179
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.15 E-value=4.8e-11 Score=76.31 Aligned_cols=65 Identities=17% Similarity=0.209 Sum_probs=54.8
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-----CCeeEEEecCCC-CCCc-ccEEEeec
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-----EGVSHVGGDMFD-AIPN-ADAVFMKV 89 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-----~rv~~~~~d~~~-~~p~-~D~i~l~~ 89 (90)
+..+|||+|||+|.++..+++. ..+++++|+ |.+++.+++. .+++++.+|+.+ +++. +|+|++..
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~ 109 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNINRKFDLITCCL 109 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCSCCEEEEEECT
T ss_pred CCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCccCCceEEEEcC
Confidence 5679999999999999999998 468999999 9999888752 279999999977 4444 99999864
No 180
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.15 E-value=1.6e-10 Score=72.34 Aligned_cols=61 Identities=13% Similarity=0.113 Sum_probs=52.3
Q ss_pred eEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-----CCeeEEEecCCC-CCC--cccEEEee
Q 034578 26 SMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-----EGVSHVGGDMFD-AIP--NADAVFMK 88 (90)
Q Consensus 26 ~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-----~rv~~~~~d~~~-~~p--~~D~i~l~ 88 (90)
+|||+|||+|.++..+++. ..+++++|+ +.+++.+++. .+++++.+|+.+ +++ .+|+|++.
T Consensus 32 ~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 101 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSI 101 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEE
T ss_pred CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEE
Confidence 9999999999999999987 569999999 9999888752 489999999987 554 29999875
No 181
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.14 E-value=1.5e-10 Score=74.50 Aligned_cols=74 Identities=22% Similarity=0.311 Sum_probs=60.1
Q ss_pred HHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-------CCCeeEEEecCCCCC-C
Q 034578 10 KAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-------HEGVSHVGGDMFDAI-P 80 (90)
Q Consensus 10 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-------~~rv~~~~~d~~~~~-p 80 (90)
..++..++ ..+..+|||+|||+|.++..+++. ..+++++|+ |.+++.+++ .+++++..+|+.+.. +
T Consensus 81 ~~~~~~~~---~~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 155 (248)
T 2yvl_A 81 FYIALKLN---LNKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVP 155 (248)
T ss_dssp HHHHHHTT---CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCC
T ss_pred HHHHHhcC---CCCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccC
Confidence 34555555 456789999999999999999998 789999999 999888765 268999999998855 4
Q ss_pred c--ccEEEee
Q 034578 81 N--ADAVFMK 88 (90)
Q Consensus 81 ~--~D~i~l~ 88 (90)
. +|+|++.
T Consensus 156 ~~~~D~v~~~ 165 (248)
T 2yvl_A 156 EGIFHAAFVD 165 (248)
T ss_dssp TTCBSEEEEC
T ss_pred CCcccEEEEC
Confidence 3 9999864
No 182
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.14 E-value=7.7e-11 Score=82.47 Aligned_cols=79 Identities=8% Similarity=0.154 Sum_probs=62.6
Q ss_pred hhhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC------CCeeEEEecCCC
Q 034578 5 TKITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH------EGVSHVGGDMFD 77 (90)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~------~rv~~~~~d~~~ 77 (90)
++.+.+.+++.++ ..+..+|||+|||+|.++..+++. ..+++++|+ +.+++.|+++ .+++|+.+|+.+
T Consensus 271 ~e~l~~~~~~~l~---~~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~ 345 (433)
T 1uwv_A 271 NQKMVARALEWLD---VQPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEE 345 (433)
T ss_dssp HHHHHHHHHHHHT---CCTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTS
T ss_pred HHHHHHHHHHhhc---CCCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHH
Confidence 3445566666665 455679999999999999999987 678999999 9999988752 489999999987
Q ss_pred CCC-------cccEEEee
Q 034578 78 AIP-------NADAVFMK 88 (90)
Q Consensus 78 ~~p-------~~D~i~l~ 88 (90)
.++ .+|+|++.
T Consensus 346 ~l~~~~~~~~~fD~Vv~d 363 (433)
T 1uwv_A 346 DVTKQPWAKNGFDKVLLD 363 (433)
T ss_dssp CCSSSGGGTTCCSEEEEC
T ss_pred HhhhhhhhcCCCCEEEEC
Confidence 322 38999864
No 183
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.14 E-value=8.1e-11 Score=77.30 Aligned_cols=67 Identities=18% Similarity=0.166 Sum_probs=55.1
Q ss_pred CCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-------CCeeEEEecCCC-CC-C-c-ccEEEeec
Q 034578 22 NNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-------EGVSHVGGDMFD-AI-P-N-ADAVFMKV 89 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-------~rv~~~~~d~~~-~~-p-~-~D~i~l~~ 89 (90)
.+..+|||+|||+|.++..+++. +..+++++|+ +.+++.+++. .+++++.+|+.+ ++ + . +|+|++..
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 141 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF 141 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES
T ss_pred CCCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECc
Confidence 45679999999999999998876 5669999999 9999887652 479999999987 55 3 3 99999864
No 184
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.14 E-value=2.2e-10 Score=72.40 Aligned_cols=76 Identities=17% Similarity=0.209 Sum_probs=58.5
Q ss_pred hHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCC---CCC-c-
Q 034578 8 TMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTHEGVSHVGGDMFD---AIP-N- 81 (90)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~---~~p-~- 81 (90)
..+.+++.++ .+..+|||+|||+|.++..+++. + .+++++|+ +.+++.+++.. .+++.+|+.+ +++ .
T Consensus 21 ~~~~l~~~~~----~~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~ 93 (230)
T 3cc8_A 21 VNPNLLKHIK----KEWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEKL-DHVVLGDIETMDMPYEEEQ 93 (230)
T ss_dssp CCHHHHTTCC----TTCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTTS-SEEEESCTTTCCCCSCTTC
T ss_pred HHHHHHHHhc----cCCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHhC-CcEEEcchhhcCCCCCCCc
Confidence 3445555543 25679999999999999999998 4 89999999 99998887653 3788899875 333 2
Q ss_pred ccEEEeecC
Q 034578 82 ADAVFMKVA 90 (90)
Q Consensus 82 ~D~i~l~~v 90 (90)
+|+|++.++
T Consensus 94 fD~v~~~~~ 102 (230)
T 3cc8_A 94 FDCVIFGDV 102 (230)
T ss_dssp EEEEEEESC
T ss_pred cCEEEECCh
Confidence 899998753
No 185
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.13 E-value=1.1e-10 Score=80.89 Aligned_cols=83 Identities=14% Similarity=0.102 Sum_probs=66.8
Q ss_pred cchhhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCC-----------------------------------
Q 034578 3 CTTKITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPH----------------------------------- 47 (90)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~----------------------------------- 47 (90)
.+.+.++..++.... +.+...++|.+||+|.++++.+....+
T Consensus 177 pl~e~LAaall~l~~---~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~ 253 (384)
T 3ldg_A 177 PIKENMAAAIILLSN---WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADY 253 (384)
T ss_dssp CCCHHHHHHHHHHTT---CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCT
T ss_pred CCcHHHHHHHHHHhC---CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhc
Confidence 345667888888777 566789999999999999998876543
Q ss_pred ---CeEEEeeh-HHHHHhCCC-------CCCeeEEEecCCC-CCCc-ccEEEee
Q 034578 48 ---IKGINFDL-QHVIATAPT-------HEGVSHVGGDMFD-AIPN-ADAVFMK 88 (90)
Q Consensus 48 ---~~~~~~D~-p~~~~~a~~-------~~rv~~~~~d~~~-~~p~-~D~i~l~ 88 (90)
.+++++|+ |.+++.|++ .+++++..+|+++ +.+. +|+|+++
T Consensus 254 ~~~~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~N 307 (384)
T 3ldg_A 254 DIQLDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISN 307 (384)
T ss_dssp TCCCCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEEC
T ss_pred cCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccCCcCEEEEC
Confidence 57999999 999998876 2579999999988 3444 9999875
No 186
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.13 E-value=1e-10 Score=73.66 Aligned_cols=63 Identities=19% Similarity=0.266 Sum_probs=52.7
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCC-eEEEeeh-HHHHHhCCCC-CCeeEEEecCCC-CCCc--ccEEEeecC
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHI-KGINFDL-QHVIATAPTH-EGVSHVGGDMFD-AIPN--ADAVFMKVA 90 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-p~~~~~a~~~-~rv~~~~~d~~~-~~p~--~D~i~l~~v 90 (90)
+..+|||+|||+|.++..+ .. +++++|+ +.+++.++++ .+++++.+|+.+ +++. +|+|++.++
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 104 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTT 104 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESC
T ss_pred CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcCh
Confidence 5679999999999999887 44 8999999 9999888764 689999999977 5543 999998753
No 187
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.13 E-value=1.2e-10 Score=74.33 Aligned_cols=68 Identities=12% Similarity=0.218 Sum_probs=56.5
Q ss_pred CCCCCeEEEecCCchHHHHHHHHHC-----CCCeEEEeeh-HHHHHhCCCC-----------CCeeEEEecCCCCC----
Q 034578 21 FNNIRSMVDVGGGTGTVLAEIVKSY-----PHIKGINFDL-QHVIATAPTH-----------EGVSHVGGDMFDAI---- 79 (90)
Q Consensus 21 ~~~~~~vlDvG~G~G~~~~~l~~~~-----p~~~~~~~D~-p~~~~~a~~~-----------~rv~~~~~d~~~~~---- 79 (90)
..+..+|||+|||+|.++..+++.. |..+++++|+ |.+++.++++ .+++++.+|+.+..
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEK 157 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccC
Confidence 4456899999999999999999986 6789999999 9998887652 47999999998743
Q ss_pred C---cccEEEee
Q 034578 80 P---NADAVFMK 88 (90)
Q Consensus 80 p---~~D~i~l~ 88 (90)
+ .||+|++.
T Consensus 158 ~~~~~fD~I~~~ 169 (227)
T 2pbf_A 158 KELGLFDAIHVG 169 (227)
T ss_dssp HHHCCEEEEEEC
T ss_pred ccCCCcCEEEEC
Confidence 2 38999875
No 188
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.13 E-value=1.7e-10 Score=69.94 Aligned_cols=73 Identities=22% Similarity=0.277 Sum_probs=57.2
Q ss_pred HHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHC-CCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCC-C-------
Q 034578 9 MKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSY-PHIKGINFDL-QHVIATAPTHEGVSHVGGDMFD-A------- 78 (90)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~-~------- 78 (90)
...+++.+.. ..+..+|||+|||+|.++..+++.+ |+.+++++|+ + +++ ..+++++.+|+.+ +
T Consensus 10 l~~~~~~~~~--~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~----~~~~~~~~~d~~~~~~~~~~~~ 82 (180)
T 1ej0_A 10 LDEIQQSDKL--FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP----IVGVDFLQGDFRDELVMKALLE 82 (180)
T ss_dssp HHHHHHHHCC--CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC----CTTEEEEESCTTSHHHHHHHHH
T ss_pred HHHHHHHhCC--CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc----cCcEEEEEcccccchhhhhhhc
Confidence 4455666552 4566799999999999999999995 7799999999 6 543 2689999999987 4
Q ss_pred -CC--cccEEEee
Q 034578 79 -IP--NADAVFMK 88 (90)
Q Consensus 79 -~p--~~D~i~l~ 88 (90)
++ .+|+|++.
T Consensus 83 ~~~~~~~D~i~~~ 95 (180)
T 1ej0_A 83 RVGDSKVQVVMSD 95 (180)
T ss_dssp HHTTCCEEEEEEC
T ss_pred cCCCCceeEEEEC
Confidence 54 29999974
No 189
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.13 E-value=3.6e-11 Score=76.20 Aligned_cols=79 Identities=13% Similarity=0.133 Sum_probs=58.6
Q ss_pred hhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC------CCeeEEEecCCC--
Q 034578 7 ITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH------EGVSHVGGDMFD-- 77 (90)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~------~rv~~~~~d~~~-- 77 (90)
.+.+.+++.+.. ..+..+|||+|||+|.++..++++.. .+++++|+ |.+++.++++ ++++++.+|+.+
T Consensus 40 ~~~~~l~~~l~~--~~~~~~vLDlgcG~G~~~~~l~~~~~-~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~ 116 (202)
T 2fpo_A 40 RVRETLFNWLAP--VIVDAQCLDCFAGSGALGLEALSRYA-AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFL 116 (202)
T ss_dssp HHHHHHHHHHHH--HHTTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHH
T ss_pred HHHHHHHHHHHh--hcCCCeEEEeCCCcCHHHHHHHhcCC-CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHH
Confidence 344455554431 11457999999999999999887753 48999999 9999988752 489999999876
Q ss_pred CC-C-cccEEEee
Q 034578 78 AI-P-NADAVFMK 88 (90)
Q Consensus 78 ~~-p-~~D~i~l~ 88 (90)
+. + .+|+|++.
T Consensus 117 ~~~~~~fD~V~~~ 129 (202)
T 2fpo_A 117 AQKGTPHNIVFVD 129 (202)
T ss_dssp SSCCCCEEEEEEC
T ss_pred hhcCCCCCEEEEC
Confidence 22 2 39999875
No 190
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.12 E-value=7.4e-11 Score=77.84 Aligned_cols=69 Identities=12% Similarity=0.256 Sum_probs=57.9
Q ss_pred hhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC----CCCeeEEEecCCC-CC
Q 034578 6 KITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT----HEGVSHVGGDMFD-AI 79 (90)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~----~~rv~~~~~d~~~-~~ 79 (90)
..+++.+++.++ ..+..+|||||||+|.++..++++. .+++++|+ +.+++.+++ .++++++.+|+++ ++
T Consensus 15 ~~i~~~iv~~~~---~~~~~~VLEIG~G~G~lt~~La~~~--~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~ 89 (255)
T 3tqs_A 15 SFVLQKIVSAIH---PQKTDTLVEIGPGRGALTDYLLTEC--DNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDF 89 (255)
T ss_dssp HHHHHHHHHHHC---CCTTCEEEEECCTTTTTHHHHTTTS--SEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCG
T ss_pred HHHHHHHHHhcC---CCCcCEEEEEcccccHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCH
Confidence 345677888777 5667899999999999999999975 68999999 999988765 3789999999988 44
No 191
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.12 E-value=4.6e-11 Score=75.62 Aligned_cols=66 Identities=20% Similarity=0.214 Sum_probs=55.3
Q ss_pred CCCeEEEecCCchHHHHHHHHHCC-CCeEEEeeh-HHHHHhCCC-------CCCeeEEEecCCC--C-CCcccEEEee
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYP-HIKGINFDL-QHVIATAPT-------HEGVSHVGGDMFD--A-IPNADAVFMK 88 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-p~~~~~a~~-------~~rv~~~~~d~~~--~-~p~~D~i~l~ 88 (90)
+..+|||+|||+|..+..+++..| ..+++++|+ |.+++.+++ .++++++.+|..+ + ++.+|+|++.
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~ 133 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRDIDILFMD 133 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCSEEEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCCCCEEEEc
Confidence 457999999999999999999988 889999999 999988875 2579999999865 2 2228999864
No 192
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.12 E-value=1e-11 Score=80.95 Aligned_cols=67 Identities=16% Similarity=0.244 Sum_probs=56.0
Q ss_pred CCCCeEEEecCCchHHHHHHHHHCC-CCeEEEeeh-HHHHHhCCC-------CCCeeEEEecCCCC---C------Cccc
Q 034578 22 NNIRSMVDVGGGTGTVLAEIVKSYP-HIKGINFDL-QHVIATAPT-------HEGVSHVGGDMFDA---I------PNAD 83 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-p~~~~~a~~-------~~rv~~~~~d~~~~---~------p~~D 83 (90)
.+..+|||+|||+|..+..+++..| +.+++++|+ |.+++.|++ .++++++.+|..+. + ..||
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD 138 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFD 138 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEE
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEe
Confidence 3567999999999999999999986 899999999 888877765 25899999998762 2 2399
Q ss_pred EEEee
Q 034578 84 AVFMK 88 (90)
Q Consensus 84 ~i~l~ 88 (90)
+|++.
T Consensus 139 ~V~~d 143 (242)
T 3r3h_A 139 FIFID 143 (242)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 99874
No 193
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.12 E-value=2.2e-11 Score=78.59 Aligned_cols=56 Identities=14% Similarity=0.163 Sum_probs=48.5
Q ss_pred CCCCeEEEecCCchHHHHHHHHHCC-CCeEEEeeh-HHHHHhCCCC-------CCeeEEEecCCC
Q 034578 22 NNIRSMVDVGGGTGTVLAEIVKSYP-HIKGINFDL-QHVIATAPTH-------EGVSHVGGDMFD 77 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-p~~~~~a~~~-------~rv~~~~~d~~~ 77 (90)
.+..+|||+|||+|..+..+++..| ..+++++|+ |.+++.++++ ++++++.+|+.+
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 123 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALE 123 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHH
Confidence 3567999999999999999999987 789999999 9998887652 469999999865
No 194
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.11 E-value=4.3e-10 Score=73.47 Aligned_cols=81 Identities=11% Similarity=0.085 Sum_probs=63.2
Q ss_pred hhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHH-CCCCeEEEeeh-HHHHHhCC----CCCCeeEEEecCCCC--
Q 034578 7 ITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKS-YPHIKGINFDL-QHVIATAP----THEGVSHVGGDMFDA-- 78 (90)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~-~p~~~~~~~D~-p~~~~~a~----~~~rv~~~~~d~~~~-- 78 (90)
.++..++..++...+++..+|||+|||+|.++..+++. .|.-+++++|+ |.+++.++ +.+++..+.+|...+
T Consensus 61 klaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~ 140 (233)
T 4df3_A 61 KLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEK 140 (233)
T ss_dssp HHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGG
T ss_pred HHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccc
Confidence 45777777665322567899999999999999999998 59999999999 98887654 357899999988662
Q ss_pred --C-Cc-ccEEEe
Q 034578 79 --I-PN-ADAVFM 87 (90)
Q Consensus 79 --~-p~-~D~i~l 87 (90)
. .. +|+|++
T Consensus 141 ~~~~~~~vDvVf~ 153 (233)
T 4df3_A 141 YRHLVEGVDGLYA 153 (233)
T ss_dssp GTTTCCCEEEEEE
T ss_pred cccccceEEEEEE
Confidence 1 12 788775
No 195
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.11 E-value=1.1e-10 Score=75.41 Aligned_cols=55 Identities=16% Similarity=0.152 Sum_probs=45.8
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-H-HHHHhC---CCC------CCeeEEEecCCC
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-Q-HVIATA---PTH------EGVSHVGGDMFD 77 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p-~~~~~a---~~~------~rv~~~~~d~~~ 77 (90)
+..+|||||||+|.++..++++.|..+++++|+ | .+++.| +++ .+++++.+|..+
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~ 89 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAES 89 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTB
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHH
Confidence 567999999999999999999999999999998 4 455544 542 579999999865
No 196
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.11 E-value=7.9e-11 Score=78.15 Aligned_cols=66 Identities=29% Similarity=0.338 Sum_probs=55.7
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC----------CCCeeEEEecCCCC---CCc-ccEEEe
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT----------HEGVSHVGGDMFDA---IPN-ADAVFM 87 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~----------~~rv~~~~~d~~~~---~p~-~D~i~l 87 (90)
.+.+|||||||+|.++.++++..|..+++++|+ |.+++.+++ .+|++++.+|..+. .+. ||+|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 468999999999999999999878889999999 999888764 36899999998762 233 999987
Q ss_pred e
Q 034578 88 K 88 (90)
Q Consensus 88 ~ 88 (90)
.
T Consensus 155 d 155 (275)
T 1iy9_A 155 D 155 (275)
T ss_dssp S
T ss_pred C
Confidence 4
No 197
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.10 E-value=8.2e-11 Score=77.01 Aligned_cols=64 Identities=20% Similarity=0.299 Sum_probs=52.7
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-----CCeeEEEecCCCCCC--cccEEEee
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-----EGVSHVGGDMFDAIP--NADAVFMK 88 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-----~rv~~~~~d~~~~~p--~~D~i~l~ 88 (90)
+..+|||+|||+|.++..+++..+ +++++|+ |.+++.++++ -.+++..+|+.+.++ .+|+|+.+
T Consensus 120 ~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~~~~fD~Vv~n 191 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALPFGPFDLLVAN 191 (254)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGGGCCEEEEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCcCCCCCEEEEC
Confidence 567999999999999999998765 9999999 9999888752 128999999876443 39999875
No 198
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.10 E-value=9.3e-11 Score=79.96 Aligned_cols=67 Identities=24% Similarity=0.316 Sum_probs=56.4
Q ss_pred CCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC----------CCCeeEEEecCCC---CCC--cccEE
Q 034578 22 NNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT----------HEGVSHVGGDMFD---AIP--NADAV 85 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~----------~~rv~~~~~d~~~---~~p--~~D~i 85 (90)
..+.+|||||||+|.++..+++..|..+++++|+ |.+++.|++ .+|++++.+|+.+ ..+ .||+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 3568999999999999999999888899999999 999988764 2589999999865 233 39999
Q ss_pred Eee
Q 034578 86 FMK 88 (90)
Q Consensus 86 ~l~ 88 (90)
++.
T Consensus 199 i~d 201 (334)
T 1xj5_A 199 IVD 201 (334)
T ss_dssp EEC
T ss_pred EEC
Confidence 974
No 199
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.09 E-value=2.6e-10 Score=75.15 Aligned_cols=64 Identities=11% Similarity=0.043 Sum_probs=55.4
Q ss_pred CCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-----CCCeeEEEecCCC-CCCc-ccEEEee
Q 034578 22 NNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-----HEGVSHVGGDMFD-AIPN-ADAVFMK 88 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-----~~rv~~~~~d~~~-~~p~-~D~i~l~ 88 (90)
..+.+|||||||+|-++..+. |..+++++|+ +.+++.+++ ..+.++..+|+.. ++|+ +|++++.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~~~DvvLll 175 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAEAGDLALIF 175 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCCBCSEEEEE
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCCCcchHHHH
Confidence 457899999999999999988 8999999999 999998876 4678999999998 4555 9999775
No 200
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.09 E-value=7.6e-11 Score=79.87 Aligned_cols=66 Identities=20% Similarity=0.273 Sum_probs=55.5
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC----------CCCeeEEEecCCCC---CCc-ccEEEe
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT----------HEGVSHVGGDMFDA---IPN-ADAVFM 87 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~----------~~rv~~~~~d~~~~---~p~-~D~i~l 87 (90)
.+.+|||||||+|.++..+++..|..+++++|+ |.+++.+++ .+|++++.+|..+. .++ ||+|++
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 457999999999999999999878899999999 999887754 25899999998763 233 999997
Q ss_pred e
Q 034578 88 K 88 (90)
Q Consensus 88 ~ 88 (90)
.
T Consensus 196 d 196 (321)
T 2pt6_A 196 D 196 (321)
T ss_dssp E
T ss_pred C
Confidence 4
No 201
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.09 E-value=5.7e-10 Score=70.43 Aligned_cols=73 Identities=19% Similarity=0.336 Sum_probs=55.9
Q ss_pred hhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCCCC-----
Q 034578 6 KITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTHEGVSHVGGDMFDAI----- 79 (90)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~~~----- 79 (90)
......+.+.+.. +.+..+|||+|||+|.++..++++ ..+++++|+ |. ...++++++.+|+.+..
T Consensus 10 ~~KL~ei~~~~~~--~~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~-----~~~~~v~~~~~D~~~~~~~~~~ 80 (191)
T 3dou_A 10 AFKLEFLLDRYRV--VRKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEM-----EEIAGVRFIRCDIFKETIFDDI 80 (191)
T ss_dssp HHHHHHHHHHHCC--SCTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCC-----CCCTTCEEEECCTTSSSHHHHH
T ss_pred HHHHHHHHHHcCC--CCCCCEEEEEeecCCHHHHHHHHc--CCcEEEEecccc-----ccCCCeEEEEccccCHHHHHHH
Confidence 3344556666662 566789999999999999999998 789999998 53 22468999999998731
Q ss_pred ---------CcccEEEe
Q 034578 80 ---------PNADAVFM 87 (90)
Q Consensus 80 ---------p~~D~i~l 87 (90)
..+|+|+.
T Consensus 81 ~~~~~~~~~~~~D~Vls 97 (191)
T 3dou_A 81 DRALREEGIEKVDDVVS 97 (191)
T ss_dssp HHHHHHHTCSSEEEEEE
T ss_pred HHHhhcccCCcceEEec
Confidence 25899886
No 202
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.09 E-value=1.3e-10 Score=74.35 Aligned_cols=80 Identities=14% Similarity=0.187 Sum_probs=61.0
Q ss_pred HHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCC------CCeEEEeeh-HHHHHhCCC-----------CCCeeE
Q 034578 9 MKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYP------HIKGINFDL-QHVIATAPT-----------HEGVSH 70 (90)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p------~~~~~~~D~-p~~~~~a~~-----------~~rv~~ 70 (90)
...+++.+.. ...+..+|||+|||+|.++..+++..+ ..+++++|+ |.+++.+++ ..++++
T Consensus 71 ~~~~~~~l~~-~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~ 149 (227)
T 1r18_A 71 HAFALEYLRD-HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLI 149 (227)
T ss_dssp HHHHHHHTTT-TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEE
T ss_pred HHHHHHHHHh-hCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEE
Confidence 3445555521 144567999999999999999999765 368999999 999988865 247999
Q ss_pred EEecCCCCCC---cccEEEeec
Q 034578 71 VGGDMFDAIP---NADAVFMKV 89 (90)
Q Consensus 71 ~~~d~~~~~p---~~D~i~l~~ 89 (90)
+.+|..++++ .||+|++..
T Consensus 150 ~~~d~~~~~~~~~~fD~I~~~~ 171 (227)
T 1r18_A 150 VEGDGRKGYPPNAPYNAIHVGA 171 (227)
T ss_dssp EESCGGGCCGGGCSEEEEEECS
T ss_pred EECCcccCCCcCCCccEEEECC
Confidence 9999987554 289998753
No 203
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.09 E-value=2.8e-10 Score=74.17 Aligned_cols=65 Identities=22% Similarity=0.244 Sum_probs=52.3
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCC-CCCc--ccEEEeec
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTHEGVSHVGGDMFD-AIPN--ADAVFMKV 89 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~-~~p~--~D~i~l~~ 89 (90)
+..+|||+|||+|.++..+++. ..+++++|+ |.+++.+++...-.++.+|+.+ +++. +|+|++..
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 122 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALG 122 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECS
T ss_pred CCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcCCCEEECcHHHCCCCCCCEEEEEEcc
Confidence 5679999999999999999987 568999999 9999888763222388899877 5543 99998754
No 204
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.09 E-value=4.5e-11 Score=78.12 Aligned_cols=67 Identities=16% Similarity=0.241 Sum_probs=56.0
Q ss_pred CCCCeEEEecCCchHHHHHHHHHCC-CCeEEEeeh-HHHHHhCCC-------CCCeeEEEecCCCC---C------C-cc
Q 034578 22 NNIRSMVDVGGGTGTVLAEIVKSYP-HIKGINFDL-QHVIATAPT-------HEGVSHVGGDMFDA---I------P-NA 82 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-p~~~~~a~~-------~~rv~~~~~d~~~~---~------p-~~ 82 (90)
.+..+|||||||+|..+..+++..| +.+++++|+ |.+++.+++ .++++++.+|..+. + + .|
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 3467999999999999999999988 789999999 999888875 25899999998752 2 2 39
Q ss_pred cEEEee
Q 034578 83 DAVFMK 88 (90)
Q Consensus 83 D~i~l~ 88 (90)
|+|++.
T Consensus 158 D~V~~d 163 (247)
T 1sui_A 158 DFIFVD 163 (247)
T ss_dssp SEEEEC
T ss_pred EEEEEc
Confidence 999874
No 205
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.07 E-value=1.8e-10 Score=79.12 Aligned_cols=65 Identities=11% Similarity=0.120 Sum_probs=56.6
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC------CCeeEEEecCCCCCC-----cccEEEee
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH------EGVSHVGGDMFDAIP-----NADAVFMK 88 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~------~rv~~~~~d~~~~~p-----~~D~i~l~ 88 (90)
+..+|||+| |+|.++..+++..|..+++++|+ |.+++.|+++ .|++++.+|+.+++| .||+|+++
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~ 248 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITD 248 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEEC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEEC
Confidence 457999999 99999999999998899999999 9999988762 389999999988443 38999986
No 206
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.07 E-value=9.1e-11 Score=78.16 Aligned_cols=67 Identities=12% Similarity=0.136 Sum_probs=58.0
Q ss_pred CCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-----CCCeeEEEecCCCC-CCc-ccEEEee
Q 034578 22 NNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-----HEGVSHVGGDMFDA-IPN-ADAVFMK 88 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-----~~rv~~~~~d~~~~-~p~-~D~i~l~ 88 (90)
..+.+|||||||+|-++..+....|..+++++|+ +.+++.+++ ..+.++...|+... .++ +|++++.
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~~~~DvaL~l 205 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDEPADVTLLL 205 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCCSCCSEEEET
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCCCCcchHHHH
Confidence 3578999999999999999999999999999999 999998876 35688999999984 444 9999764
No 207
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.07 E-value=1.5e-10 Score=80.23 Aligned_cols=65 Identities=18% Similarity=0.277 Sum_probs=51.7
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCC-------CCCeeEEEecCCC-CCCc-ccEEEee
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPT-------HEGVSHVGGDMFD-AIPN-ADAVFMK 88 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~-------~~rv~~~~~d~~~-~~p~-~D~i~l~ 88 (90)
+..+|||||||+|.++...+++. ..+++++|..++++.|++ .++++++.+|..+ .+|+ +|+|+.-
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aG-A~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE 156 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAG-ARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSE 156 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT-CSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECC
T ss_pred CCCEEEEeCCCccHHHHHHHHhC-CCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEee
Confidence 45789999999999998877763 357999998446666654 3789999999988 6776 9999853
No 208
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.07 E-value=6.2e-11 Score=75.65 Aligned_cols=67 Identities=9% Similarity=0.117 Sum_probs=56.0
Q ss_pred CCCCeEEEecCCchHHHHHHHHHCC-CCeEEEeeh-HHHHHhCCC-------CCCeeEEEecCCCC---C------Cccc
Q 034578 22 NNIRSMVDVGGGTGTVLAEIVKSYP-HIKGINFDL-QHVIATAPT-------HEGVSHVGGDMFDA---I------PNAD 83 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-p~~~~~a~~-------~~rv~~~~~d~~~~---~------p~~D 83 (90)
.+..+|||+|||+|..+..+++..| ..+++++|+ |.+++.+++ .++++++.+|+.+. + ..+|
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 4567999999999999999999987 789999999 998888765 26899999998652 2 3489
Q ss_pred EEEee
Q 034578 84 AVFMK 88 (90)
Q Consensus 84 ~i~l~ 88 (90)
+|++.
T Consensus 148 ~v~~d 152 (229)
T 2avd_A 148 VAVVD 152 (229)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99874
No 209
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=99.07 E-value=1e-10 Score=76.96 Aligned_cols=70 Identities=17% Similarity=0.197 Sum_probs=55.4
Q ss_pred hhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC----CCeeEEEecCCC-CC
Q 034578 6 KITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH----EGVSHVGGDMFD-AI 79 (90)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~----~rv~~~~~d~~~-~~ 79 (90)
..+++.+++.+. ..+..+|||||||+|.++. +. +.++.+++++|+ +.+++.++++ ++++++.+|+.+ ++
T Consensus 7 ~~i~~~iv~~~~---~~~~~~VLEIG~G~G~lt~-l~-~~~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~ 81 (252)
T 1qyr_A 7 QFVIDSIVSAIN---PQKGQAMVEIGPGLAALTE-PV-GERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNF 81 (252)
T ss_dssp HHHHHHHHHHHC---CCTTCCEEEECCTTTTTHH-HH-HTTCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCH
T ss_pred HHHHHHHHHhcC---CCCcCEEEEECCCCcHHHH-hh-hCCCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCH
Confidence 345677787776 5566789999999999999 64 455545999999 9999988763 589999999987 44
Q ss_pred C
Q 034578 80 P 80 (90)
Q Consensus 80 p 80 (90)
+
T Consensus 82 ~ 82 (252)
T 1qyr_A 82 G 82 (252)
T ss_dssp H
T ss_pred H
Confidence 4
No 210
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.06 E-value=2.1e-10 Score=76.57 Aligned_cols=66 Identities=17% Similarity=0.130 Sum_probs=54.0
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-------------CCeeEEEecCCC-C----C--C-
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-------------EGVSHVGGDMFD-A----I--P- 80 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-------------~rv~~~~~d~~~-~----~--p- 80 (90)
+..+|||+|||+|.++..+++ .+..+++++|+ +.+++.+++. .+++++.+|+.+ + + +
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKK-GRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCEEEEECCCCcHHHHHHHh-cCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 567999999999999999988 46789999999 9999887642 379999999987 3 3 2
Q ss_pred -cccEEEeec
Q 034578 81 -NADAVFMKV 89 (90)
Q Consensus 81 -~~D~i~l~~ 89 (90)
.+|+|++..
T Consensus 113 ~~fD~V~~~~ 122 (313)
T 3bgv_A 113 MCFDICSCQF 122 (313)
T ss_dssp CCEEEEEEET
T ss_pred CCEEEEEEec
Confidence 389999864
No 211
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.06 E-value=6.4e-10 Score=70.86 Aligned_cols=77 Identities=19% Similarity=0.151 Sum_probs=59.1
Q ss_pred HHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHC-CCCeEEEeeh-HHHHHhCCC-----------CCCeeEEEecCCC
Q 034578 11 AFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSY-PHIKGINFDL-QHVIATAPT-----------HEGVSHVGGDMFD 77 (90)
Q Consensus 11 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-p~~~~~a~~-----------~~rv~~~~~d~~~ 77 (90)
.+++.+.. ...+..+|||+|||+|.++..+++.. |..+++++|+ |.+++.+++ .++++++.+|+.+
T Consensus 66 ~~l~~l~~-~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 144 (226)
T 1i1n_A 66 YALELLFD-QLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRM 144 (226)
T ss_dssp HHHHHTTT-TSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGG
T ss_pred HHHHHHHh-hCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCccc
Confidence 44444431 13456799999999999999999985 6789999999 999888764 2479999999876
Q ss_pred CCC---cccEEEee
Q 034578 78 AIP---NADAVFMK 88 (90)
Q Consensus 78 ~~p---~~D~i~l~ 88 (90)
..+ .||+|++.
T Consensus 145 ~~~~~~~fD~i~~~ 158 (226)
T 1i1n_A 145 GYAEEAPYDAIHVG 158 (226)
T ss_dssp CCGGGCCEEEEEEC
T ss_pred CcccCCCcCEEEEC
Confidence 322 38999875
No 212
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.05 E-value=5.4e-10 Score=77.31 Aligned_cols=80 Identities=11% Similarity=0.147 Sum_probs=60.3
Q ss_pred hhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-----CCeeEEEecCCCC-
Q 034578 6 KITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-----EGVSHVGGDMFDA- 78 (90)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-----~rv~~~~~d~~~~- 78 (90)
+.+.+.+.+...+. ..+..+|||+|||+|.++..++++ ..+++++|+ +.+++.++++ .+++++.+|+.+.
T Consensus 217 ~~ll~~l~~~l~~~-~~~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~ 293 (381)
T 3dmg_A 217 LLLLEALQERLGPE-GVRGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEAL 293 (381)
T ss_dssp HHHHHHHHHHHCTT-TTTTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTS
T ss_pred HHHHHHHHHhhccc-CCCCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhcc
Confidence 34445554443210 124579999999999999999997 569999999 9999988762 3589999999884
Q ss_pred CC--cccEEEee
Q 034578 79 IP--NADAVFMK 88 (90)
Q Consensus 79 ~p--~~D~i~l~ 88 (90)
.+ .||+|+++
T Consensus 294 ~~~~~fD~Ii~n 305 (381)
T 3dmg_A 294 TEEARFDIIVTN 305 (381)
T ss_dssp CTTCCEEEEEEC
T ss_pred ccCCCeEEEEEC
Confidence 33 39999985
No 213
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.05 E-value=4.5e-10 Score=74.20 Aligned_cols=64 Identities=11% Similarity=0.084 Sum_probs=55.4
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC----------CCeeEEEecCCCCCCcccEEEee
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH----------EGVSHVGGDMFDAIPNADAVFMK 88 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~----------~rv~~~~~d~~~~~p~~D~i~l~ 88 (90)
.+.+|||||||+|.++.++++. + .+++++|+ |.+++.|++. +|++++.+|..+.+..||+|++.
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~~~fD~Ii~d 146 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIFCL 146 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCCCCEEEEEES
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHHhhCCEEEEC
Confidence 4579999999999999999998 7 89999999 9999998762 58999999998744449999864
No 214
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.05 E-value=2.6e-10 Score=76.35 Aligned_cols=66 Identities=24% Similarity=0.315 Sum_probs=55.3
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC----------CCCeeEEEecCCCC---CCc-ccEEEe
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT----------HEGVSHVGGDMFDA---IPN-ADAVFM 87 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~----------~~rv~~~~~d~~~~---~p~-~D~i~l 87 (90)
.+.+|||||||+|.++..+++..|..+++++|+ |.+++.+++ .+|++++.+|..+. .+. ||+|++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 457999999999999999999888899999999 999887764 36899999997652 233 999986
Q ss_pred e
Q 034578 88 K 88 (90)
Q Consensus 88 ~ 88 (90)
.
T Consensus 170 d 170 (296)
T 1inl_A 170 D 170 (296)
T ss_dssp E
T ss_pred c
Confidence 3
No 215
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.04 E-value=9.7e-11 Score=76.19 Aligned_cols=70 Identities=13% Similarity=0.368 Sum_probs=59.2
Q ss_pred hhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC----CCeeEEEecCCC-CC
Q 034578 6 KITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH----EGVSHVGGDMFD-AI 79 (90)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~----~rv~~~~~d~~~-~~ 79 (90)
....+.+++.++ ..+..+|||+|||+|.++..++++. .+++++|+ +.+++.++++ ++++++.+|+.+ ++
T Consensus 15 ~~~~~~i~~~~~---~~~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~ 89 (245)
T 1yub_A 15 EKVLNQIIKQLN---LKETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQF 89 (245)
T ss_dssp TTTHHHHHHHCC---CCSSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTC
T ss_pred HHHHHHHHHhcC---CCCCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCc
Confidence 456778888877 5667899999999999999999985 78999999 9999888763 579999999988 55
Q ss_pred C
Q 034578 80 P 80 (90)
Q Consensus 80 p 80 (90)
+
T Consensus 90 ~ 90 (245)
T 1yub_A 90 P 90 (245)
T ss_dssp C
T ss_pred c
Confidence 4
No 216
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.03 E-value=1.9e-10 Score=77.39 Aligned_cols=67 Identities=25% Similarity=0.383 Sum_probs=56.2
Q ss_pred CCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC----------CCCeeEEEecCCCC---CCc-ccEEE
Q 034578 22 NNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT----------HEGVSHVGGDMFDA---IPN-ADAVF 86 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~----------~~rv~~~~~d~~~~---~p~-~D~i~ 86 (90)
..+.+|||||||+|.++..++++.|..+++++|+ |.+++.|++ .+|++++.+|..+. .+. ||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 3568999999999999999999888899999999 999988764 36899999998652 233 99998
Q ss_pred ee
Q 034578 87 MK 88 (90)
Q Consensus 87 l~ 88 (90)
+.
T Consensus 174 ~d 175 (304)
T 2o07_A 174 TD 175 (304)
T ss_dssp EE
T ss_pred EC
Confidence 64
No 217
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.03 E-value=1.2e-10 Score=75.48 Aligned_cols=67 Identities=21% Similarity=0.215 Sum_probs=56.0
Q ss_pred CCCCeEEEecCCchHHHHHHHHHCC-CCeEEEeeh-HHHHHhCCC-------CCCeeEEEecCCCC---C------C-cc
Q 034578 22 NNIRSMVDVGGGTGTVLAEIVKSYP-HIKGINFDL-QHVIATAPT-------HEGVSHVGGDMFDA---I------P-NA 82 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-p~~~~~a~~-------~~rv~~~~~d~~~~---~------p-~~ 82 (90)
.+..+|||||||+|..+..+++..| +.+++++|+ |.+++.+++ .++++++.+|..+. + + .|
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 3567999999999999999999987 799999999 999888765 25799999998762 2 2 39
Q ss_pred cEEEee
Q 034578 83 DAVFMK 88 (90)
Q Consensus 83 D~i~l~ 88 (90)
|+|++.
T Consensus 149 D~I~~d 154 (237)
T 3c3y_A 149 DFGFVD 154 (237)
T ss_dssp EEEEEC
T ss_pred CEEEEC
Confidence 999864
No 218
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.03 E-value=2.7e-10 Score=75.65 Aligned_cols=65 Identities=23% Similarity=0.392 Sum_probs=54.1
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC----------------CCCeeEEEecCCCCC--C-cc
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT----------------HEGVSHVGGDMFDAI--P-NA 82 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~----------------~~rv~~~~~d~~~~~--p-~~ 82 (90)
.+.+|||||||+|.++..++++ |..+++++|+ |.+++.|++ .+|++++.+|..+.+ + .|
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~f 153 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRGF 153 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCCE
T ss_pred CCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcccCCe
Confidence 4679999999999999999998 8889999999 998887652 368999999976522 3 39
Q ss_pred cEEEee
Q 034578 83 DAVFMK 88 (90)
Q Consensus 83 D~i~l~ 88 (90)
|+|++.
T Consensus 154 D~Ii~d 159 (281)
T 1mjf_A 154 DVIIAD 159 (281)
T ss_dssp EEEEEE
T ss_pred eEEEEC
Confidence 999874
No 219
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.03 E-value=2.6e-10 Score=76.55 Aligned_cols=67 Identities=21% Similarity=0.254 Sum_probs=56.1
Q ss_pred CCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC----------CCCeeEEEecCCCC----CCc-ccEE
Q 034578 22 NNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT----------HEGVSHVGGDMFDA----IPN-ADAV 85 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~----------~~rv~~~~~d~~~~----~p~-~D~i 85 (90)
.+..+|||||||+|.++..+++..|..+++++|+ |.+++.+++ .+|++++.+|+.+. .+. ||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 3567999999999999999999878889999999 999888764 36899999998762 133 9999
Q ss_pred Eee
Q 034578 86 FMK 88 (90)
Q Consensus 86 ~l~ 88 (90)
++.
T Consensus 174 i~d 176 (304)
T 3bwc_A 174 IID 176 (304)
T ss_dssp EEE
T ss_pred EEC
Confidence 974
No 220
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.02 E-value=3.7e-10 Score=76.15 Aligned_cols=66 Identities=23% Similarity=0.301 Sum_probs=55.7
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-----------CCCeeEEEecCCCC---CCc-ccEEE
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-----------HEGVSHVGGDMFDA---IPN-ADAVF 86 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-----------~~rv~~~~~d~~~~---~p~-~D~i~ 86 (90)
.+.+|||||||+|.++..+++..|..+++++|+ |.+++.+++ .+|++++.+|..+. .+. ||+|+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 457999999999999999999888889999999 999887753 35899999998762 233 99999
Q ss_pred ee
Q 034578 87 MK 88 (90)
Q Consensus 87 l~ 88 (90)
+.
T Consensus 157 ~d 158 (314)
T 1uir_A 157 ID 158 (314)
T ss_dssp EE
T ss_pred EC
Confidence 75
No 221
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.00 E-value=9.6e-10 Score=72.85 Aligned_cols=81 Identities=10% Similarity=0.094 Sum_probs=57.2
Q ss_pred hhhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh--HHHHHhCCCC----------------C
Q 034578 5 TKITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL--QHVIATAPTH----------------E 66 (90)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~--p~~~~~a~~~----------------~ 66 (90)
+..+++.+.+... ..+..+|||+|||+|.++..+++.. ..+++++|+ |.+++.++++ +
T Consensus 64 ~~~l~~~l~~~~~---~~~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~ 139 (281)
T 3bzb_A 64 ARALADTLCWQPE---LIAGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRA 139 (281)
T ss_dssp HHHHHHHHHHCGG---GTTTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTTCC----------C
T ss_pred HHHHHHHHHhcch---hcCCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCC
Confidence 4455666665544 3456799999999999999988863 458999998 6787766431 3
Q ss_pred CeeEEEecCCCC---C-----C-cccEEEeec
Q 034578 67 GVSHVGGDMFDA---I-----P-NADAVFMKV 89 (90)
Q Consensus 67 rv~~~~~d~~~~---~-----p-~~D~i~l~~ 89 (90)
++++...|+.+. + + .||+|+++.
T Consensus 140 ~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~d 171 (281)
T 3bzb_A 140 SPKVVPYRWGDSPDSLQRCTGLQRFQVVLLAD 171 (281)
T ss_dssp CCEEEECCTTSCTHHHHHHHSCSSBSEEEEES
T ss_pred CeEEEEecCCCccHHHHhhccCCCCCEEEEeC
Confidence 688886666542 2 2 399999864
No 222
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.00 E-value=2.3e-09 Score=66.65 Aligned_cols=72 Identities=19% Similarity=0.266 Sum_probs=53.6
Q ss_pred HHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCC---------CeEEEeehHHHHHhCCCCCCeeEE-EecCCCC-
Q 034578 10 KAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPH---------IKGINFDLQHVIATAPTHEGVSHV-GGDMFDA- 78 (90)
Q Consensus 10 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~---------~~~~~~D~p~~~~~a~~~~rv~~~-~~d~~~~- 78 (90)
..+.+.+.. +.+..+|||+|||+|.++..++++++. .+++++|+.++ ....+++++ .+|+.+.
T Consensus 11 ~~l~~~~~~--~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~----~~~~~~~~~~~~d~~~~~ 84 (196)
T 2nyu_A 11 LEVNERHQI--LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHI----FPLEGATFLCPADVTDPR 84 (196)
T ss_dssp HHHHHHHCC--CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCC----CCCTTCEEECSCCTTSHH
T ss_pred HHHHHhcCC--CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhc----ccCCCCeEEEeccCCCHH
Confidence 344455552 456789999999999999999999875 89999998321 123578999 9998762
Q ss_pred --------CC--cccEEEe
Q 034578 79 --------IP--NADAVFM 87 (90)
Q Consensus 79 --------~p--~~D~i~l 87 (90)
++ .+|+|++
T Consensus 85 ~~~~~~~~~~~~~fD~V~~ 103 (196)
T 2nyu_A 85 TSQRILEVLPGRRADVILS 103 (196)
T ss_dssp HHHHHHHHSGGGCEEEEEE
T ss_pred HHHHHHHhcCCCCCcEEEe
Confidence 23 3899986
No 223
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.00 E-value=2.3e-10 Score=77.45 Aligned_cols=66 Identities=24% Similarity=0.405 Sum_probs=55.4
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC----------CCCeeEEEecCCCCC---C-cccEEEe
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT----------HEGVSHVGGDMFDAI---P-NADAVFM 87 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~----------~~rv~~~~~d~~~~~---p-~~D~i~l 87 (90)
.+.+|||||||+|.++..+++..|..+++++|+ |.+++.|++ .+|++++.+|..+.+ + .||+|++
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 457999999999999999999888899999999 999887753 358999999987632 3 3999986
Q ss_pred e
Q 034578 88 K 88 (90)
Q Consensus 88 ~ 88 (90)
.
T Consensus 188 d 188 (314)
T 2b2c_A 188 D 188 (314)
T ss_dssp C
T ss_pred c
Confidence 4
No 224
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.99 E-value=2.8e-10 Score=75.71 Aligned_cols=66 Identities=20% Similarity=0.273 Sum_probs=55.7
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC----------CCCeeEEEecCCCC---CCc-ccEEEe
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT----------HEGVSHVGGDMFDA---IPN-ADAVFM 87 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~----------~~rv~~~~~d~~~~---~p~-~D~i~l 87 (90)
.+.+|||||||+|.++..+++..|..+++++|+ |.+++.+++ .+|++++.+|..+. .++ ||+|++
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 157 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEE
Confidence 568999999999999999999888899999999 999887754 36899999998762 233 999997
Q ss_pred e
Q 034578 88 K 88 (90)
Q Consensus 88 ~ 88 (90)
.
T Consensus 158 d 158 (283)
T 2i7c_A 158 D 158 (283)
T ss_dssp E
T ss_pred c
Confidence 3
No 225
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.99 E-value=1.2e-10 Score=75.12 Aligned_cols=66 Identities=20% Similarity=0.275 Sum_probs=54.9
Q ss_pred CCCeEEEecCCchHHHHHHHHHCC-CCeEEEeeh-HHHHHhCCC-------CCCeeEEEecCCCC---C------CcccE
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYP-HIKGINFDL-QHVIATAPT-------HEGVSHVGGDMFDA---I------PNADA 84 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-p~~~~~a~~-------~~rv~~~~~d~~~~---~------p~~D~ 84 (90)
+..+|||+|||+|..+..+++..| +.+++++|+ |.+++.|++ .++++++.+|+.+. + ..+|+
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 467999999999999999999987 789999999 999888875 25799999997541 2 34899
Q ss_pred EEee
Q 034578 85 VFMK 88 (90)
Q Consensus 85 i~l~ 88 (90)
|++.
T Consensus 152 V~~d 155 (232)
T 3cbg_A 152 IFID 155 (232)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9864
No 226
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.99 E-value=3.2e-10 Score=73.31 Aligned_cols=68 Identities=12% Similarity=0.065 Sum_probs=53.9
Q ss_pred CCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC----CC------------------------------
Q 034578 22 NNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT----HE------------------------------ 66 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~----~~------------------------------ 66 (90)
.+..+|||+|||+|.++..+++..+ .+++++|+ |.+++.+++ ..
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 3567899999999999999988766 68999999 999888754 11
Q ss_pred -Ce-eEEEecCCCC-C--C---c-ccEEEeecC
Q 034578 67 -GV-SHVGGDMFDA-I--P---N-ADAVFMKVA 90 (90)
Q Consensus 67 -rv-~~~~~d~~~~-~--p---~-~D~i~l~~v 90 (90)
++ +++.+|+.+. . + . +|+|++..+
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~ 166 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLC 166 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESC
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhh
Confidence 27 9999999872 2 2 3 899998753
No 227
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.97 E-value=4.8e-10 Score=80.75 Aligned_cols=65 Identities=14% Similarity=0.140 Sum_probs=53.3
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC----C--CCeeEEEecCCC---CC-C-cccEEEeec
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT----H--EGVSHVGGDMFD---AI-P-NADAVFMKV 89 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~----~--~rv~~~~~d~~~---~~-p-~~D~i~l~~ 89 (90)
.+.+|||||||.|.++..+++. +++++++|. +.+++.|+. . -+++|..++..+ .. + .||+|++..
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~--ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e 142 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK--GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLS 142 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEES
T ss_pred CCCeEEEECCCCcHHHHHHHhC--CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECc
Confidence 4568999999999999999997 689999999 999988764 2 368999998865 23 3 399998764
No 228
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.97 E-value=1.1e-09 Score=72.45 Aligned_cols=64 Identities=11% Similarity=0.074 Sum_probs=49.0
Q ss_pred CCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC--C------CeeEE--EecCCCCCCc-ccEEEee
Q 034578 21 FNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH--E------GVSHV--GGDMFDAIPN-ADAVFMK 88 (90)
Q Consensus 21 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~--~------rv~~~--~~d~~~~~p~-~D~i~l~ 88 (90)
+.+..+|||+|||+|.++..++++ .+++++|+ | +...+++. . ++.++ .+|+.+-.+. +|+|++.
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~V~sd 147 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLPVERTDVIMCD 147 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEEC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCCCCCCcEEEEe
Confidence 455679999999999999999887 68999999 6 54444332 2 68999 8999772133 9999874
No 229
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.97 E-value=7.6e-10 Score=73.69 Aligned_cols=64 Identities=14% Similarity=0.074 Sum_probs=48.9
Q ss_pred CCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC--C------CeeEE--EecCCC-CCCcccEEEee
Q 034578 21 FNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH--E------GVSHV--GGDMFD-AIPNADAVFMK 88 (90)
Q Consensus 21 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~--~------rv~~~--~~d~~~-~~p~~D~i~l~ 88 (90)
+.+..+|||+|||+|.++..++++ .+++++|+ | +...+++. . ++.++ .+|+.+ +-..+|+|++.
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~Vvsd 155 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKMEPFQADTVLCD 155 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCCCCCCSEEEEC
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCCCCCcCEEEEC
Confidence 455679999999999999999987 68999999 6 64444332 2 78999 899876 31239999875
No 230
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.96 E-value=1.4e-09 Score=73.30 Aligned_cols=67 Identities=9% Similarity=0.091 Sum_probs=55.9
Q ss_pred CCCCCeEEEecCCchHHHHHHHHHCC-CCeEEEeeh-HHHHHhCCCC------CCeeEEEecCCC-C-CC-cccEEEe
Q 034578 21 FNNIRSMVDVGGGTGTVLAEIVKSYP-HIKGINFDL-QHVIATAPTH------EGVSHVGGDMFD-A-IP-NADAVFM 87 (90)
Q Consensus 21 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-p~~~~~a~~~------~rv~~~~~d~~~-~-~p-~~D~i~l 87 (90)
..+..+|||+|||+|..+..+++..+ ..+++++|+ +.+++.++++ .+++++.+|+.+ + .+ .+|+|++
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~ 193 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILL 193 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEE
Confidence 45668999999999999999999975 589999999 9998887652 479999999876 2 23 3999987
No 231
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.95 E-value=4.3e-10 Score=71.51 Aligned_cols=60 Identities=20% Similarity=0.268 Sum_probs=50.8
Q ss_pred CCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCC-CCCc--ccEEEeecC
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTHEGVSHVGGDMFD-AIPN--ADAVFMKVA 90 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~-~~p~--~D~i~l~~v 90 (90)
..+|||+|||+|.++..+++. +++|+ +.+++.+++. +++++.+|+.+ +++. +|+|++.++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~~ 111 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR-GVFVLKGTAENLPLKDESFDFALMVTT 111 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT-TCEEEECBTTBCCSCTTCEEEEEEESC
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc-CCEEEEcccccCCCCCCCeeEEEEcch
Confidence 679999999999999988765 99999 9999988776 79999999876 4443 899998753
No 232
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.95 E-value=8.5e-10 Score=73.69 Aligned_cols=66 Identities=20% Similarity=0.114 Sum_probs=55.5
Q ss_pred CCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-------CCCeeEEEecCCCCCCc--ccEEEee
Q 034578 22 NNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-------HEGVSHVGGDMFDAIPN--ADAVFMK 88 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-------~~rv~~~~~d~~~~~p~--~D~i~l~ 88 (90)
.+..+|||+|||+|.+++.++++ ...+++++|+ |.+++.+++ .++++++.+|..+..+. ||.|+|.
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~-g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~~ 199 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMG 199 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEEC
T ss_pred CCCCEEEEecCcCcHHHHHHHHh-cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEEC
Confidence 35689999999999999999987 4578999999 999998876 37899999999884332 9999886
No 233
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.93 E-value=8.2e-10 Score=72.94 Aligned_cols=68 Identities=7% Similarity=0.062 Sum_probs=55.9
Q ss_pred CCCCCeEEEecCCchHHHHHHHHHCCC-CeEEEeeh-HHHHHhCCCC------CCeeEEEecCCC-CC-----C-cccEE
Q 034578 21 FNNIRSMVDVGGGTGTVLAEIVKSYPH-IKGINFDL-QHVIATAPTH------EGVSHVGGDMFD-AI-----P-NADAV 85 (90)
Q Consensus 21 ~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-p~~~~~a~~~------~rv~~~~~d~~~-~~-----p-~~D~i 85 (90)
..+..+|||+|||+|..+..+++..++ .+++++|+ +.+++.++++ .+++++.+|+.+ +. + .+|+|
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~V 160 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKI 160 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEE
Confidence 445679999999999999999999876 89999999 8988877652 489999999876 21 3 38999
Q ss_pred Eee
Q 034578 86 FMK 88 (90)
Q Consensus 86 ~l~ 88 (90)
++.
T Consensus 161 l~d 163 (274)
T 3ajd_A 161 LLD 163 (274)
T ss_dssp EEE
T ss_pred EEc
Confidence 874
No 234
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.92 E-value=8.5e-10 Score=75.06 Aligned_cols=63 Identities=14% Similarity=0.125 Sum_probs=52.3
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-------C-CeeEEEecCCCCC------C-cccEEE
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-------E-GVSHVGGDMFDAI------P-NADAVF 86 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-------~-rv~~~~~d~~~~~------p-~~D~i~ 86 (90)
+..+|||+|||+|.++..+++.. .+++++|+ +.+++.++++ + +++++.+|+++.+ . .||+|+
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~g--a~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAG--AEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTT--CEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCCcEEEcccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 35699999999999999999964 39999999 9999988762 2 5999999998732 2 399998
Q ss_pred e
Q 034578 87 M 87 (90)
Q Consensus 87 l 87 (90)
+
T Consensus 231 ~ 231 (332)
T 2igt_A 231 T 231 (332)
T ss_dssp E
T ss_pred E
Confidence 7
No 235
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.92 E-value=3.8e-09 Score=74.00 Aligned_cols=63 Identities=17% Similarity=0.171 Sum_probs=53.6
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC------CCeeEEEecCCCCCC-cccEEEee
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH------EGVSHVGGDMFDAIP-NADAVFMK 88 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~------~rv~~~~~d~~~~~p-~~D~i~l~ 88 (90)
+..+|||+|||+|.++..+++. ..+++++|+ +.+++.|+++ . ++|+.+|+.+.++ .+|+|++.
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~~~fD~Vv~d 360 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSVKGFDTVIVD 360 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCCTTCSEEEEC
T ss_pred CCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCccCCCEEEEc
Confidence 4679999999999999999986 458999999 9999988762 3 8999999988555 49999874
No 236
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.89 E-value=2.5e-09 Score=72.56 Aligned_cols=66 Identities=17% Similarity=0.262 Sum_probs=55.4
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCC-----CeEEEeeh-HHHHHhCCC-----CCCeeEEEecCCCCCC--cccEEEee
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPH-----IKGINFDL-QHVIATAPT-----HEGVSHVGGDMFDAIP--NADAVFMK 88 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~-----~~~~~~D~-p~~~~~a~~-----~~rv~~~~~d~~~~~p--~~D~i~l~ 88 (90)
...+|||+|||+|.++..+++..+. .+++++|+ |.+++.|+. ..++.++.+|.+++.+ .+|+|+.+
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~~~~~~fD~Ii~N 208 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANLLVDPVDVVISD 208 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSCCCCCCEEEEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCccccCCccEEEEC
Confidence 4579999999999999999998765 78999999 999988875 2368999999988543 39999875
No 237
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.89 E-value=1.1e-09 Score=75.65 Aligned_cols=80 Identities=16% Similarity=0.233 Sum_probs=56.7
Q ss_pred hhhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCCCCeeEEEecCC----C--
Q 034578 5 TKITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTHEGVSHVGGDMF----D-- 77 (90)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~----~-- 77 (90)
.+..++.+++.+. ..+..+|||||||+|.++..++++ ..+++++|+ +.+++.+++. .+......+. +
T Consensus 92 ~~~~~~~l~~~~~---~~~~~~VLDiGcG~G~~~~~l~~~--g~~v~gvD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~l 165 (416)
T 4e2x_A 92 FAMLARDFLATEL---TGPDPFIVEIGCNDGIMLRTIQEA--GVRHLGFEPSSGVAAKAREK-GIRVRTDFFEKATADDV 165 (416)
T ss_dssp HHHHHHHHHHTTT---CSSSCEEEEETCTTTTTHHHHHHT--TCEEEEECCCHHHHHHHHTT-TCCEECSCCSHHHHHHH
T ss_pred HHHHHHHHHHHhC---CCCCCEEEEecCCCCHHHHHHHHc--CCcEEEECCCHHHHHHHHHc-CCCcceeeechhhHhhc
Confidence 3445666777666 556789999999999999999987 458999999 9999988775 2333222121 1
Q ss_pred CCC--cccEEEeecC
Q 034578 78 AIP--NADAVFMKVA 90 (90)
Q Consensus 78 ~~p--~~D~i~l~~v 90 (90)
+++ .||+|++.++
T Consensus 166 ~~~~~~fD~I~~~~v 180 (416)
T 4e2x_A 166 RRTEGPANVIYAANT 180 (416)
T ss_dssp HHHHCCEEEEEEESC
T ss_pred ccCCCCEEEEEECCh
Confidence 122 3999998764
No 238
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.89 E-value=6.3e-10 Score=73.43 Aligned_cols=54 Identities=11% Similarity=0.137 Sum_probs=36.7
Q ss_pred HHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 9 MKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
.+.+.+.+.. ...+..+|||||||+|.+. .++...+..+++++|+ |.+++.+++
T Consensus 58 ~~~l~~~l~~-~~~~~~~vLDiGcG~G~~~-~l~~~~~~~~v~gvD~s~~~l~~a~~ 112 (289)
T 2g72_A 58 LRCLAQTFAT-GEVSGRTLIDIGSGPTVYQ-LLSACSHFEDITMTDFLEVNRQELGR 112 (289)
T ss_dssp HHHHHHHHHT-SCSCCSEEEEETCTTCCGG-GTTGGGGCSEEEEECSCHHHHHHHHH
T ss_pred HHHHHHHhCC-CCCCCCeEEEECCCcChHH-HHhhccCCCeEEEeCCCHHHHHHHHH
Confidence 4445555431 0124579999999999944 3444445679999999 999987654
No 239
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.89 E-value=5.1e-10 Score=73.85 Aligned_cols=65 Identities=14% Similarity=0.159 Sum_probs=53.3
Q ss_pred CCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-H-------HHHHhCCCC-------CCeeEEEecCCCC---CC---
Q 034578 22 NNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-Q-------HVIATAPTH-------EGVSHVGGDMFDA---IP--- 80 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p-------~~~~~a~~~-------~rv~~~~~d~~~~---~p--- 80 (90)
.+..+|||+|||+|.++..+++. ..+++++|+ | .+++.++++ .|++++.+|+.+. ++
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~ 159 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQ 159 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHH
T ss_pred CCcCeEEEeeCccCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccC
Confidence 34578999999999999999996 568999999 9 888888653 5699999998762 32
Q ss_pred -cccEEEee
Q 034578 81 -NADAVFMK 88 (90)
Q Consensus 81 -~~D~i~l~ 88 (90)
.+|+|++.
T Consensus 160 ~~fD~V~~d 168 (258)
T 2r6z_A 160 GKPDIVYLD 168 (258)
T ss_dssp CCCSEEEEC
T ss_pred CCccEEEEC
Confidence 38999984
No 240
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.87 E-value=2.5e-09 Score=72.60 Aligned_cols=63 Identities=19% Similarity=0.187 Sum_probs=53.9
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-------CCeeEEEecCCCCCCcccEEEee
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-------EGVSHVGGDMFDAIPNADAVFMK 88 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-------~rv~~~~~d~~~~~p~~D~i~l~ 88 (90)
+..+|||+|||+|.++.. ++ ...+++++|+ |.+++.++++ ++++++.+|+++.+..+|+|++.
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~~~fD~Vi~d 265 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVDVKGNRVIMN 265 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCCCCEEEEEEC
T ss_pred CCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhcCCCcEEEEC
Confidence 567999999999999999 77 5788999999 9999988762 57999999998855459999985
No 241
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.86 E-value=1.8e-09 Score=71.47 Aligned_cols=68 Identities=18% Similarity=0.192 Sum_probs=46.5
Q ss_pred CCCeEEEecCCchHHHH----HHHHHCCCCeE--EEeeh-HHHHHhCCCC-------CCeeE--EEecCCC-C------C
Q 034578 23 NIRSMVDVGGGTGTVLA----EIVKSYPHIKG--INFDL-QHVIATAPTH-------EGVSH--VGGDMFD-A------I 79 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~----~l~~~~p~~~~--~~~D~-p~~~~~a~~~-------~rv~~--~~~d~~~-~------~ 79 (90)
+..+|||||||+|.++. .++.++|+.++ +++|. +.|++.+++. +++++ ..++..+ + +
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKK 131 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcccc
Confidence 45689999999997654 45566788855 99999 9999877541 34444 3444422 1 2
Q ss_pred C-c-ccEEEeecC
Q 034578 80 P-N-ADAVFMKVA 90 (90)
Q Consensus 80 p-~-~D~i~l~~v 90 (90)
+ . ||+|+++++
T Consensus 132 ~~~~fD~V~~~~~ 144 (292)
T 2aot_A 132 ELQKWDFIHMIQM 144 (292)
T ss_dssp CCCCEEEEEEESC
T ss_pred CCCceeEEEEeee
Confidence 2 3 999998764
No 242
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.85 E-value=6e-10 Score=72.98 Aligned_cols=67 Identities=15% Similarity=0.109 Sum_probs=48.5
Q ss_pred CCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-----------------------------------
Q 034578 22 NNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH----------------------------------- 65 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~----------------------------------- 65 (90)
.+..+|||||||+|.++..+++.. ..+++++|+ |.+++.+++.
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~-~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDS-FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGT-EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhh-hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 355789999999998877665542 136999999 9999976531
Q ss_pred CCee-EEEecCCCC--C-----CcccEEEeec
Q 034578 66 EGVS-HVGGDMFDA--I-----PNADAVFMKV 89 (90)
Q Consensus 66 ~rv~-~~~~d~~~~--~-----p~~D~i~l~~ 89 (90)
.+++ ++.+|+.+. + +.||+|+++.
T Consensus 133 ~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~ 164 (263)
T 2a14_A 133 AAVKRVLKCDVHLGNPLAPAVLPLADCVLTLL 164 (263)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEES
T ss_pred hhhheEEeccccCCCCCCccccCCCCEeeehH
Confidence 1233 889999873 2 2499999874
No 243
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.84 E-value=6.5e-09 Score=65.61 Aligned_cols=64 Identities=16% Similarity=0.133 Sum_probs=48.1
Q ss_pred HHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCC-CCCc--ccEEE
Q 034578 11 AFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTHEGVSHVGGDMFD-AIPN--ADAVF 86 (90)
Q Consensus 11 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~-~~p~--~D~i~ 86 (90)
.+++.+.. ..+..+|||+|||+|.++..++ .+++++|+ +. ++++..+|+.+ +++. +|+|+
T Consensus 57 ~~~~~l~~--~~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~---------~~~~~~~d~~~~~~~~~~fD~v~ 120 (215)
T 2zfu_A 57 RIARDLRQ--RPASLVVADFGCGDCRLASSIR-----NPVHCFDLASL---------DPRVTVCDMAQVPLEDESVDVAV 120 (215)
T ss_dssp HHHHHHHT--SCTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS---------STTEEESCTTSCSCCTTCEEEEE
T ss_pred HHHHHHhc--cCCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC---------CceEEEeccccCCCCCCCEeEEE
Confidence 34444442 3456799999999999998873 67999998 54 67889999987 5543 89999
Q ss_pred eecC
Q 034578 87 MKVA 90 (90)
Q Consensus 87 l~~v 90 (90)
+.++
T Consensus 121 ~~~~ 124 (215)
T 2zfu_A 121 FCLS 124 (215)
T ss_dssp EESC
T ss_pred Eehh
Confidence 8753
No 244
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.83 E-value=5.7e-09 Score=77.01 Aligned_cols=83 Identities=20% Similarity=0.123 Sum_probs=65.7
Q ss_pred cchhhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHH--------------------------------------
Q 034578 3 CTTKITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKS-------------------------------------- 44 (90)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~-------------------------------------- 44 (90)
.+.+.++..++.... +.+...++|.+||||.++++.+..
T Consensus 173 pl~e~LAa~ll~~~~---~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~ 249 (703)
T 3v97_A 173 PIKETLAAAIVMRSG---WQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRAR 249 (703)
T ss_dssp SSCHHHHHHHHHHTT---CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHhhC---CCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhh
Confidence 345677888888777 456788999999999999998865
Q ss_pred ----CCCCeEEEeeh-HHHHHhCCCC-------CCeeEEEecCCC-CCC----cccEEEee
Q 034578 45 ----YPHIKGINFDL-QHVIATAPTH-------EGVSHVGGDMFD-AIP----NADAVFMK 88 (90)
Q Consensus 45 ----~p~~~~~~~D~-p~~~~~a~~~-------~rv~~~~~d~~~-~~p----~~D~i~l~ 88 (90)
.+..+++++|+ |.+++.|+++ ++++|..+|+.+ ..| .+|+|+.+
T Consensus 250 ~~~~~~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~N 310 (703)
T 3v97_A 250 KGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSN 310 (703)
T ss_dssp HHHHHCCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEEC
T ss_pred hccccCCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeC
Confidence 23468999999 9999988762 469999999987 222 48999875
No 245
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.83 E-value=4e-09 Score=73.81 Aligned_cols=74 Identities=19% Similarity=0.257 Sum_probs=55.2
Q ss_pred hHHHHHhhcccCCCCCCCeEEEecCC------chHHHHHHHHH-CCCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCC-C
Q 034578 8 TMKAFVSHYKVDGFNNIRSMVDVGGG------TGTVLAEIVKS-YPHIKGINFDL-QHVIATAPTHEGVSHVGGDMFD-A 78 (90)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~vlDvG~G------~G~~~~~l~~~-~p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~-~ 78 (90)
..+.+++.+. .+..+||||||| +|..+..++++ +|+.+++++|+ |.+. ...++++|+.+|..+ +
T Consensus 205 ~Ye~lL~~l~----~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---~~~~rI~fv~GDa~dlp 277 (419)
T 3sso_A 205 HYDRHFRDYR----NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---VDELRIRTIQGDQNDAE 277 (419)
T ss_dssp HHHHHHGGGT----TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---GCBTTEEEEECCTTCHH
T ss_pred HHHHHHHhhc----CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---hcCCCcEEEEecccccc
Confidence 3455555554 246899999999 66667777765 69999999999 8773 245789999999987 3
Q ss_pred CC--------cccEEEee
Q 034578 79 IP--------NADAVFMK 88 (90)
Q Consensus 79 ~p--------~~D~i~l~ 88 (90)
++ .||+|+..
T Consensus 278 f~~~l~~~d~sFDlVisd 295 (419)
T 3sso_A 278 FLDRIARRYGPFDIVIDD 295 (419)
T ss_dssp HHHHHHHHHCCEEEEEEC
T ss_pred hhhhhhcccCCccEEEEC
Confidence 33 39999863
No 246
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.83 E-value=5.1e-09 Score=70.29 Aligned_cols=65 Identities=12% Similarity=0.090 Sum_probs=47.8
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-----C-------CeeEEEecCCC---------CCC
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-----E-------GVSHVGGDMFD---------AIP 80 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-----~-------rv~~~~~d~~~---------~~p 80 (90)
...+|||||||+|..+..+++. ...+++++|+ +.|++.|++. . +++|...|+.. +++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~-~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG-EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHhc-CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 3578999999999877666654 3568999999 9999998762 1 25677777721 233
Q ss_pred --cccEEEee
Q 034578 81 --NADAVFMK 88 (90)
Q Consensus 81 --~~D~i~l~ 88 (90)
.+|+|++.
T Consensus 127 ~~~FD~V~~~ 136 (302)
T 2vdw_A 127 FGKFNIIDWQ 136 (302)
T ss_dssp SSCEEEEEEE
T ss_pred CCCeeEEEEC
Confidence 39999865
No 247
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.83 E-value=6.5e-10 Score=72.24 Aligned_cols=53 Identities=13% Similarity=0.197 Sum_probs=40.2
Q ss_pred HHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 9 MKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
.+.+++.+.. .....+|||||||+|.++..++++ ...+++++|+ |.|++.+++
T Consensus 25 L~~~L~~~~~--~~~g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~ 78 (232)
T 3opn_A 25 LEKALKEFHL--EINGKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIR 78 (232)
T ss_dssp HHHHHHHTTC--CCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHH
T ss_pred HHHHHHHcCC--CCCCCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHH
Confidence 4555666651 234569999999999999999987 3359999999 888777543
No 248
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.81 E-value=1.4e-08 Score=71.30 Aligned_cols=67 Identities=18% Similarity=0.159 Sum_probs=56.1
Q ss_pred CCCCCeEEEecCCchHHHHHHHHHCCC-CeEEEeeh-HHHHHhCCC------CCCeeEEEecCCC-C--CC-c-ccEEEe
Q 034578 21 FNNIRSMVDVGGGTGTVLAEIVKSYPH-IKGINFDL-QHVIATAPT------HEGVSHVGGDMFD-A--IP-N-ADAVFM 87 (90)
Q Consensus 21 ~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-p~~~~~a~~------~~rv~~~~~d~~~-~--~p-~-~D~i~l 87 (90)
..+..+|||+|||+|..+..+++..++ .+++++|+ +.+++.+++ ..+++++.+|+.+ + ++ . ||+|++
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~ 336 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLL 336 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEE
Confidence 455679999999999999999999887 89999999 888887764 2479999999977 2 44 3 899986
No 249
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.80 E-value=2.7e-09 Score=73.23 Aligned_cols=66 Identities=9% Similarity=0.119 Sum_probs=51.3
Q ss_pred hhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC------CCeeEEEecCCC
Q 034578 6 KITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH------EGVSHVGGDMFD 77 (90)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~------~rv~~~~~d~~~ 77 (90)
+.+.+.+++..+ .. ..+|||+|||+|.++..+++.. .+++++|+ |.+++.|+++ ++++|+.+|..+
T Consensus 200 ~~l~~~~~~~~~---~~-~~~vLDl~cG~G~~~l~la~~~--~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~ 272 (369)
T 3bt7_A 200 IQMLEWALDVTK---GS-KGDLLELYCGNGNFSLALARNF--DRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEE 272 (369)
T ss_dssp HHHHHHHHHHTT---TC-CSEEEEESCTTSHHHHHHGGGS--SEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHH
T ss_pred HHHHHHHHHHhh---cC-CCEEEEccCCCCHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHH
Confidence 344555555554 33 4689999999999999998853 58999999 9999988752 589999999865
No 250
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.79 E-value=1.1e-08 Score=68.79 Aligned_cols=65 Identities=17% Similarity=0.072 Sum_probs=48.4
Q ss_pred CCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-----HHHHHhCCC--C--CCeeEEEe-cCCC-CCCcccEEEee
Q 034578 21 FNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-----QHVIATAPT--H--EGVSHVGG-DMFD-AIPNADAVFMK 88 (90)
Q Consensus 21 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-----p~~~~~a~~--~--~rv~~~~~-d~~~-~~p~~D~i~l~ 88 (90)
+.+..+|||||||+|.++..++++ .+++++|+ +.+++..+. . ++++++.+ |+.+ +...+|+|++.
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~~~~fD~V~sd 155 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIPPERCDTLLCD 155 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSCCCCCSEEEEC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCCcCCCCEEEEC
Confidence 455679999999999999999987 47899997 433332221 2 57999999 9877 33349999873
No 251
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.77 E-value=2.7e-09 Score=73.71 Aligned_cols=64 Identities=16% Similarity=0.129 Sum_probs=52.5
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-------C-CeeEEEecCCCCC------C-cccEEE
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-------E-GVSHVGGDMFDAI------P-NADAVF 86 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-------~-rv~~~~~d~~~~~------p-~~D~i~ 86 (90)
+..+|||+|||+|.++..+++.. ..+++++|+ |.+++.|+++ + +++++.+|+++.+ . .+|+|+
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 45799999999999999999863 348999999 9999988752 2 8999999987622 1 489999
Q ss_pred e
Q 034578 87 M 87 (90)
Q Consensus 87 l 87 (90)
+
T Consensus 291 ~ 291 (385)
T 2b78_A 291 I 291 (385)
T ss_dssp E
T ss_pred E
Confidence 7
No 252
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.76 E-value=1.6e-08 Score=70.60 Aligned_cols=67 Identities=13% Similarity=0.167 Sum_probs=55.4
Q ss_pred CCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-----CCCeeEEEecCCCC---CC--cccEEEe
Q 034578 21 FNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-----HEGVSHVGGDMFDA---IP--NADAVFM 87 (90)
Q Consensus 21 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-----~~rv~~~~~d~~~~---~p--~~D~i~l 87 (90)
..+..+|||+|||+|..+..+++..|+.+++++|+ +.+++.+++ .-+++++.+|+.+. ++ .||.|++
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~ 321 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILL 321 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEE
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEE
Confidence 44567999999999999999999999899999999 888777654 23588999999873 33 3999986
No 253
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.74 E-value=5.1e-08 Score=65.60 Aligned_cols=65 Identities=15% Similarity=0.246 Sum_probs=56.4
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-----------CCCeeEEEecCCCCC---Cc-ccEEE
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT-----------HEGVSHVGGDMFDAI---PN-ADAVF 86 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-----------~~rv~~~~~d~~~~~---p~-~D~i~ 86 (90)
.+++||=||+|.|..+.++++..|..+++.+|+ |.+++.+++ .+|++++.+|.++.+ ++ ||+|+
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi 162 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEE
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEE
Confidence 578999999999999999999888889999999 999988764 489999999998843 22 99998
Q ss_pred e
Q 034578 87 M 87 (90)
Q Consensus 87 l 87 (90)
+
T Consensus 163 ~ 163 (294)
T 3o4f_A 163 S 163 (294)
T ss_dssp E
T ss_pred E
Confidence 6
No 254
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.72 E-value=2e-08 Score=67.46 Aligned_cols=77 Identities=8% Similarity=0.118 Sum_probs=51.4
Q ss_pred HHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhC-CCCCCeeEEE-ecCC--C--CCCc
Q 034578 9 MKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATA-PTHEGVSHVG-GDMF--D--AIPN 81 (90)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a-~~~~rv~~~~-~d~~--~--~~p~ 81 (90)
...+++.+.- ..+..++||+|||||.++..++++ +..+++++|+ +.|++.+ ++.+|+.... .|+. . .+|.
T Consensus 73 l~~~l~~~~~--~~~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~ 149 (291)
T 3hp7_A 73 LEKALAVFNL--SVEDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTE 149 (291)
T ss_dssp HHHHHHHTTC--CCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTT
T ss_pred HHHHHHhcCC--CccccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCC
Confidence 3455566651 224569999999999999999886 5568999999 8888773 4445654433 2332 1 2332
Q ss_pred --ccEEEee
Q 034578 82 --ADAVFMK 88 (90)
Q Consensus 82 --~D~i~l~ 88 (90)
+|++++.
T Consensus 150 ~~fD~v~~d 158 (291)
T 3hp7_A 150 GLPSFASID 158 (291)
T ss_dssp CCCSEEEEC
T ss_pred CCCCEEEEE
Confidence 7887753
No 255
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.72 E-value=7.3e-09 Score=72.48 Aligned_cols=64 Identities=19% Similarity=0.373 Sum_probs=53.1
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC--------CCeeEEEecCCCCC---C--cccEEEee
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH--------EGVSHVGGDMFDAI---P--NADAVFMK 88 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~--------~rv~~~~~d~~~~~---p--~~D~i~l~ 88 (90)
...+|||+|||+|..+..+++. ..+++++|+ |.+++.++++ ++++++.+|+++.+ + .||+|++.
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~--g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK--ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CCCEEEEeCCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 3579999999999999999887 468999999 9999888652 47999999998732 1 38999873
No 256
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.71 E-value=1.4e-08 Score=71.11 Aligned_cols=79 Identities=16% Similarity=0.104 Sum_probs=60.3
Q ss_pred hhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHC-------------CCCeEEEeeh-HHHHHhCCCC------C
Q 034578 7 ITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSY-------------PHIKGINFDL-QHVIATAPTH------E 66 (90)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-------------p~~~~~~~D~-p~~~~~a~~~------~ 66 (90)
.+++.+++.+. .....+|+|.|||+|.++..+.+.. +..+++++|+ |.+++.|+.+ .
T Consensus 158 ~v~~~mv~~l~---~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~ 234 (445)
T 2okc_A 158 PLIQAMVDCIN---PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIG 234 (445)
T ss_dssp HHHHHHHHHHC---CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhC---CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCC
Confidence 44556666555 3455789999999999999998763 4578999999 9998887641 2
Q ss_pred --CeeEEEecCCCC-CC-cccEEEee
Q 034578 67 --GVSHVGGDMFDA-IP-NADAVFMK 88 (90)
Q Consensus 67 --rv~~~~~d~~~~-~p-~~D~i~l~ 88 (90)
+..+..+|.+.. .. .+|+|+.+
T Consensus 235 ~~~~~i~~gD~l~~~~~~~fD~Iv~N 260 (445)
T 2okc_A 235 TDRSPIVCEDSLEKEPSTLVDVILAN 260 (445)
T ss_dssp SSCCSEEECCTTTSCCSSCEEEEEEC
T ss_pred cCCCCEeeCCCCCCcccCCcCEEEEC
Confidence 788999999883 33 49999875
No 257
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.71 E-value=5.8e-09 Score=68.99 Aligned_cols=74 Identities=14% Similarity=0.151 Sum_probs=53.6
Q ss_pred HHHHhhcccCCCCCC--CeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHH-------HHhCCC----C----CCeeEE
Q 034578 10 KAFVSHYKVDGFNNI--RSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHV-------IATAPT----H----EGVSHV 71 (90)
Q Consensus 10 ~~~~~~~~~~~~~~~--~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~-------~~~a~~----~----~rv~~~ 71 (90)
+.+++.+. ..+. .+|||+|||+|..+..++++ ..+++++|. |.+ ++.+++ + .|++++
T Consensus 76 e~l~~al~---l~~g~~~~VLDl~~G~G~dal~lA~~--g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~ 150 (258)
T 2oyr_A 76 EAVAKAVG---IKGDYLPDVVDATAGLGRDAFVLASV--GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLI 150 (258)
T ss_dssp SHHHHHTT---CBTTBCCCEEETTCTTCHHHHHHHHH--TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEE
T ss_pred HHHHHHhc---ccCCCCCEEEEcCCcCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEE
Confidence 34444444 3344 78999999999999999998 568999999 754 443321 1 479999
Q ss_pred EecCCC---CCCc-ccEEEee
Q 034578 72 GGDMFD---AIPN-ADAVFMK 88 (90)
Q Consensus 72 ~~d~~~---~~p~-~D~i~l~ 88 (90)
.+|..+ .++. +|+|++.
T Consensus 151 ~~D~~~~L~~~~~~fDvV~lD 171 (258)
T 2oyr_A 151 HASSLTALTDITPRPQVVYLD 171 (258)
T ss_dssp ESCHHHHSTTCSSCCSEEEEC
T ss_pred ECCHHHHHHhCcccCCEEEEc
Confidence 999865 2343 8999974
No 258
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.70 E-value=3.9e-08 Score=69.83 Aligned_cols=65 Identities=14% Similarity=0.163 Sum_probs=55.0
Q ss_pred CCCeEEEecCCchHHHHHHHHHCC-CCeEEEeeh-HHHHHhCCCC------CCeeEEEecCCC-C--CCc-ccEEEe
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYP-HIKGINFDL-QHVIATAPTH------EGVSHVGGDMFD-A--IPN-ADAVFM 87 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-p~~~~~a~~~------~rv~~~~~d~~~-~--~p~-~D~i~l 87 (90)
+..+|||+|||+|..+..+++..+ ..+++++|+ +.+++.++++ .+++++.+|..+ + .+. ||.|++
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~ 193 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILL 193 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEE
Confidence 567999999999999999999875 589999999 9998887652 579999999977 2 344 999987
No 259
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.70 E-value=1.8e-08 Score=67.31 Aligned_cols=55 Identities=22% Similarity=0.311 Sum_probs=44.7
Q ss_pred CCCeEEEecCCc---hHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC------CCCeeEEEecCCC
Q 034578 23 NIRSMVDVGGGT---GTVLAEIVKSYPHIKGINFDL-QHVIATAPT------HEGVSHVGGDMFD 77 (90)
Q Consensus 23 ~~~~vlDvG~G~---G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~------~~rv~~~~~d~~~ 77 (90)
+..++||||||+ |.+...+.+.+|+.+++++|. |.|++.|++ ..+++|+.+|+.+
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~ 142 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLD 142 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccC
Confidence 557999999996 445444455689999999999 999999875 2479999999987
No 260
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.70 E-value=5.2e-09 Score=72.25 Aligned_cols=65 Identities=20% Similarity=0.202 Sum_probs=53.6
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-------CCeeEEEecCCCCC------C-cccEEEe
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-------EGVSHVGGDMFDAI------P-NADAVFM 87 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-------~rv~~~~~d~~~~~------p-~~D~i~l 87 (90)
+..+|||+|||+|.++..+++. +..+++++|+ |.+++.++++ ++++++.+|+++.+ . .+|+|++
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 5679999999999999999986 4568999999 9999888752 28999999987621 2 3899998
Q ss_pred e
Q 034578 88 K 88 (90)
Q Consensus 88 ~ 88 (90)
.
T Consensus 296 d 296 (396)
T 2as0_A 296 D 296 (396)
T ss_dssp C
T ss_pred C
Confidence 3
No 261
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.69 E-value=4e-08 Score=60.26 Aligned_cols=55 Identities=20% Similarity=0.145 Sum_probs=45.1
Q ss_pred CCCeEEEecCCch-HHHHHHHHHCCCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCCCCC----cccEEEe
Q 034578 23 NIRSMVDVGGGTG-TVLAEIVKSYPHIKGINFDL-QHVIATAPTHEGVSHVGGDMFDAIP----NADAVFM 87 (90)
Q Consensus 23 ~~~~vlDvG~G~G-~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~~~p----~~D~i~l 87 (90)
...++||||||+| ..+..|+++ .+..++++|+ |.+++ ++..|+|++.. .||+|+.
T Consensus 35 ~~~rVlEVG~G~g~~vA~~La~~-~g~~V~atDInp~Av~---------~v~dDiF~P~~~~Y~~~DLIYs 95 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDYIRKH-SKVDLVLTDIKPSHGG---------IVRDDITSPRMEIYRGAALIYS 95 (153)
T ss_dssp SSSEEEEETCTTCCHHHHHHHHH-SCCEEEEECSSCSSTT---------EECCCSSSCCHHHHTTEEEEEE
T ss_pred CCCcEEEEccCCChHHHHHHHHh-CCCeEEEEECCccccc---------eEEccCCCCcccccCCcCEEEE
Confidence 4579999999999 699998874 3688999998 87765 88999999654 4899854
No 262
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.69 E-value=7.1e-09 Score=73.50 Aligned_cols=67 Identities=6% Similarity=-0.019 Sum_probs=54.4
Q ss_pred CCCCCeEEEecCCchHHHHHHHHHCCC-CeEEEeeh-HHHHHhCCCC-----CCeeEEEecCCC-C--CCc-ccEEEe
Q 034578 21 FNNIRSMVDVGGGTGTVLAEIVKSYPH-IKGINFDL-QHVIATAPTH-----EGVSHVGGDMFD-A--IPN-ADAVFM 87 (90)
Q Consensus 21 ~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-p~~~~~a~~~-----~rv~~~~~d~~~-~--~p~-~D~i~l 87 (90)
..+..+|||+|||+|..+..+++..++ .+++++|+ +.+++.++++ -.+.++.+|..+ . .+. ||+|++
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~ 176 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVLL 176 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEEE
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCCEEEE
Confidence 445689999999999999999999865 79999999 9999888752 128899999765 2 344 999986
No 263
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.68 E-value=9.2e-09 Score=71.00 Aligned_cols=65 Identities=25% Similarity=0.288 Sum_probs=54.0
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC--------------CCeeEEEecCCCCC------C-
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH--------------EGVSHVGGDMFDAI------P- 80 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~--------------~rv~~~~~d~~~~~------p- 80 (90)
.+.+|||||||+|.++.+++++.+ .+++.+|+ |.+++.|+++ +|++++.+|.++.+ .
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 568999999999999999998765 88999999 9999988641 27999999988732 2
Q ss_pred cccEEEee
Q 034578 81 NADAVFMK 88 (90)
Q Consensus 81 ~~D~i~l~ 88 (90)
.||+|++-
T Consensus 267 ~fDvII~D 274 (364)
T 2qfm_A 267 EFDYVIND 274 (364)
T ss_dssp CEEEEEEE
T ss_pred CceEEEEC
Confidence 39999873
No 264
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.68 E-value=4.8e-09 Score=72.45 Aligned_cols=65 Identities=15% Similarity=0.181 Sum_probs=53.4
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-------C-CeeEEEecCCCCC------C-cccEEE
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-------E-GVSHVGGDMFDAI------P-NADAVF 86 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-------~-rv~~~~~d~~~~~------p-~~D~i~ 86 (90)
+..+|||+|||+|.++..+++.. ..+++++|+ |.+++.++++ . +++++.+|+++.+ . .+|+|+
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 45799999999999999999974 468999999 9999888752 2 7999999987732 2 389998
Q ss_pred ee
Q 034578 87 MK 88 (90)
Q Consensus 87 l~ 88 (90)
+.
T Consensus 299 ~d 300 (396)
T 3c0k_A 299 MD 300 (396)
T ss_dssp EC
T ss_pred EC
Confidence 74
No 265
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.66 E-value=4.6e-09 Score=72.31 Aligned_cols=63 Identities=16% Similarity=0.168 Sum_probs=53.0
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC------CCeeEEEecCCCCC------C-cccEEEe
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH------EGVSHVGGDMFDAI------P-NADAVFM 87 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~------~rv~~~~~d~~~~~------p-~~D~i~l 87 (90)
+..+|||+|||+|.++..+++. ..+++++|+ |.+++.++++ ++++++.+|+++.+ + .+|+|++
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~ 285 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVL 285 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEE
Confidence 4678999999999999999998 678999999 9999988762 45999999987632 2 3899987
No 266
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.66 E-value=4.8e-08 Score=65.91 Aligned_cols=67 Identities=13% Similarity=0.130 Sum_probs=54.6
Q ss_pred CCCCCeEEEecCCchHHHHHHHHHC-CCCeEEEeeh-HHHHHhCCCC------CCeeEEEecCCCC---C---CcccEEE
Q 034578 21 FNNIRSMVDVGGGTGTVLAEIVKSY-PHIKGINFDL-QHVIATAPTH------EGVSHVGGDMFDA---I---PNADAVF 86 (90)
Q Consensus 21 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-p~~~~~a~~~------~rv~~~~~d~~~~---~---p~~D~i~ 86 (90)
..+..+|||+|||+|..+..+++.. +..+++++|+ +.+++.++++ .+++++.+|+.+. . ..+|.|+
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl 179 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYIL 179 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEE
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEE
Confidence 4456799999999999999999984 5689999999 9988877652 5799999998762 1 2389998
Q ss_pred e
Q 034578 87 M 87 (90)
Q Consensus 87 l 87 (90)
+
T Consensus 180 ~ 180 (309)
T 2b9e_A 180 L 180 (309)
T ss_dssp E
T ss_pred E
Confidence 6
No 267
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.65 E-value=5.3e-08 Score=67.66 Aligned_cols=64 Identities=11% Similarity=0.088 Sum_probs=50.5
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC-----CCeeEEEecCCCC---CCc-ccEEEee
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH-----EGVSHVGGDMFDA---IPN-ADAVFMK 88 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~-----~rv~~~~~d~~~~---~p~-~D~i~l~ 88 (90)
+..+|||+|||+|.++..+++.. .+++++|+ |.+++.++++ -..++..+|.++. .+. ||+|++.
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~g--a~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~d 287 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKG--AYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLD 287 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEEC
T ss_pred CCCeEEEcccchhHHHHHHHHcC--CeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEEC
Confidence 36799999999999999999974 45999999 9999988762 1235678998762 233 9999873
No 268
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.64 E-value=9.8e-09 Score=72.61 Aligned_cols=67 Identities=4% Similarity=0.002 Sum_probs=54.7
Q ss_pred CCCCCeEEEecCCchHHHHHHHHHCC-CCeEEEeeh-HHHHHhCCC------CCCeeEEEecCCC-C--CCc-ccEEEe
Q 034578 21 FNNIRSMVDVGGGTGTVLAEIVKSYP-HIKGINFDL-QHVIATAPT------HEGVSHVGGDMFD-A--IPN-ADAVFM 87 (90)
Q Consensus 21 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-p~~~~~a~~------~~rv~~~~~d~~~-~--~p~-~D~i~l 87 (90)
..+..+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++ ..++.++.+|..+ . .+. ||.|++
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~ 181 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVV 181 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEE
Confidence 44568999999999999999999865 479999999 998888765 2578999998865 2 344 999986
No 269
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.56 E-value=3.9e-08 Score=68.00 Aligned_cols=65 Identities=9% Similarity=-0.037 Sum_probs=53.5
Q ss_pred CCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC----C-----------------CCeeEEEecCCCC---
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT----H-----------------EGVSHVGGDMFDA--- 78 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~----~-----------------~rv~~~~~d~~~~--- 78 (90)
..+|||+|||+|.+++.++++.+..+++++|+ |.+++.+++ + .+++++.+|..+.
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~ 127 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAE 127 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHh
Confidence 57899999999999999999988889999999 999887764 2 2388999998662
Q ss_pred CC-cccEEEee
Q 034578 79 IP-NADAVFMK 88 (90)
Q Consensus 79 ~p-~~D~i~l~ 88 (90)
.+ .||+|++.
T Consensus 128 ~~~~fD~I~lD 138 (378)
T 2dul_A 128 RHRYFHFIDLD 138 (378)
T ss_dssp STTCEEEEEEC
T ss_pred ccCCCCEEEeC
Confidence 23 38999863
No 270
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.56 E-value=1.2e-07 Score=69.98 Aligned_cols=65 Identities=11% Similarity=0.097 Sum_probs=53.1
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC--------CCeeEEEecCCCC---CC-cccEEEee
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH--------EGVSHVGGDMFDA---IP-NADAVFMK 88 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~--------~rv~~~~~d~~~~---~p-~~D~i~l~ 88 (90)
+..+|||+|||+|.++..+++.. ..+++++|+ |.+++.++++ ++++++.+|.++. .. .||+|++.
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~g-a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~D 616 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGG-ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFID 616 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEEC
T ss_pred CCCcEEEeeechhHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEEC
Confidence 45799999999999999999853 346999999 9999988762 4799999999873 22 39999973
No 271
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.43 E-value=4.4e-07 Score=60.81 Aligned_cols=76 Identities=16% Similarity=0.178 Sum_probs=61.7
Q ss_pred hhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC--CCCeeEEEecCCC-C--C-
Q 034578 7 ITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT--HEGVSHVGGDMFD-A--I- 79 (90)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~--~~rv~~~~~d~~~-~--~- 79 (90)
-+.+.+++.+. ..+...+||.+||.|..+..++++ +.+++++|. |.+++.+++ .+|++++.+||.+ . +
T Consensus 9 VLl~e~le~L~---~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~~l~~~L~ 83 (285)
T 1wg8_A 9 VLYQEALDLLA---VRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLA 83 (285)
T ss_dssp TTHHHHHHHHT---CCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHH
T ss_pred HHHHHHHHhhC---CCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHhhccCCEEEEECCcchHHHHHH
Confidence 34677788777 566789999999999999999998 789999999 999877643 2689999999976 1 2
Q ss_pred ----CcccEEEe
Q 034578 80 ----PNADAVFM 87 (90)
Q Consensus 80 ----p~~D~i~l 87 (90)
..+|.|++
T Consensus 84 ~~g~~~vDgIL~ 95 (285)
T 1wg8_A 84 ALGVERVDGILA 95 (285)
T ss_dssp HTTCSCEEEEEE
T ss_pred HcCCCCcCEEEe
Confidence 23788886
No 272
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.41 E-value=6.2e-08 Score=67.39 Aligned_cols=66 Identities=14% Similarity=0.006 Sum_probs=53.7
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCC-CeEEEeeh-HHHHHhCCCC-------CC-eeEEEecCCCC----CC-cccEEEe
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPH-IKGINFDL-QHVIATAPTH-------EG-VSHVGGDMFDA----IP-NADAVFM 87 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-p~~~~~a~~~-------~r-v~~~~~d~~~~----~p-~~D~i~l 87 (90)
+..+|||++||+|.+++.++++.++ .+++++|+ |.+++.++++ ++ ++++.+|.++. .+ .||+|++
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~l 131 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDL 131 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEE
Confidence 3578999999999999999998765 57999999 9999888762 34 99999998652 23 3899987
Q ss_pred e
Q 034578 88 K 88 (90)
Q Consensus 88 ~ 88 (90)
.
T Consensus 132 D 132 (392)
T 3axs_A 132 D 132 (392)
T ss_dssp C
T ss_pred C
Confidence 3
No 273
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.41 E-value=5.7e-07 Score=60.33 Aligned_cols=59 Identities=19% Similarity=0.232 Sum_probs=45.3
Q ss_pred CCCCCeEEEecC------CchHHHHHHHHHCC-CCeEEEeeh-HHHHHhCCCCCCeeE-EEecCCC-CCCc-ccEEEee
Q 034578 21 FNNIRSMVDVGG------GTGTVLAEIVKSYP-HIKGINFDL-QHVIATAPTHEGVSH-VGGDMFD-AIPN-ADAVFMK 88 (90)
Q Consensus 21 ~~~~~~vlDvG~------G~G~~~~~l~~~~p-~~~~~~~D~-p~~~~~a~~~~rv~~-~~~d~~~-~~p~-~D~i~l~ 88 (90)
+.+..+|||+|| |+|. ..+++..| ..+++++|+ |. + +++++ +.+|+.+ +++. +|+|+..
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v------~~v~~~i~gD~~~~~~~~~fD~Vvsn 130 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V------SDADSTLIGDCATVHTANKWDLIISD 130 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B------CSSSEEEESCGGGCCCSSCEEEEEEC
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C------CCCEEEEECccccCCccCcccEEEEc
Confidence 456679999999 5587 44566666 689999999 66 2 47899 9999987 4444 9999863
No 274
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.39 E-value=3.6e-07 Score=66.97 Aligned_cols=64 Identities=19% Similarity=0.306 Sum_probs=47.3
Q ss_pred CCeEEEecCCchHHHHHHHHHC----CCCeEEEeehHHHHHhCCC-------CCCeeEEEecCCC-CCCc-ccEEEe
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSY----PHIKGINFDLQHVIATAPT-------HEGVSHVGGDMFD-AIPN-ADAVFM 87 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~----p~~~~~~~D~p~~~~~a~~-------~~rv~~~~~d~~~-~~p~-~D~i~l 87 (90)
...|+|||||+|-++...+++. -++++.++|..++...+++ .++|+++.+|+.+ .+|+ +|+|+.
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIVS 434 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVS 434 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEEC
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHHHHhccCCCeEEEEeCcceeccCCcccCEEEE
Confidence 4579999999999844444432 3357899998334444443 4889999999998 7887 999985
No 275
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.26 E-value=1.2e-06 Score=60.73 Aligned_cols=65 Identities=17% Similarity=0.100 Sum_probs=50.8
Q ss_pred CCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCCCCCeeEEEecCCCC-CCc--ccEEEe
Q 034578 21 FNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPTHEGVSHVGGDMFDA-IPN--ADAVFM 87 (90)
Q Consensus 21 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~~~rv~~~~~d~~~~-~p~--~D~i~l 87 (90)
+.+..++||+|+++|.++..++++ +.+++++|.-++-......++++++.+|.++. .+. +|+++.
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r--g~~V~aVD~~~l~~~l~~~~~V~~~~~d~~~~~~~~~~~D~vvs 276 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR--NMWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVC 276 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT--TCEEEEECSSCCCHHHHTTTCEEEECSCTTTCCCCSSCEEEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC--CCEEEEEEhhhcChhhccCCCeEEEeCccccccCCCCCcCEEEE
Confidence 456789999999999999999987 68999999633323334468999999999983 332 899875
No 276
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.22 E-value=1.6e-06 Score=62.35 Aligned_cols=78 Identities=22% Similarity=0.192 Sum_probs=56.7
Q ss_pred hHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCC------------------CCeEEEeeh-HHHHHhCCC----
Q 034578 8 TMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYP------------------HIKGINFDL-QHVIATAPT---- 64 (90)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p------------------~~~~~~~D~-p~~~~~a~~---- 64 (90)
+++.+++.+. .....+|+|.+||+|.++..+.+... ..+++++|+ |.+++.|+.
T Consensus 157 iv~~mv~~l~---p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l 233 (541)
T 2ar0_A 157 LIKTIIHLLK---PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLL 233 (541)
T ss_dssp HHHHHHHHHC---CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHT
T ss_pred HHHHHHHHhc---cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHH
Confidence 3444555554 34457899999999999998887532 247999999 998888764
Q ss_pred --CCC-----eeEEEecCCC-C---CCcccEEEee
Q 034578 65 --HEG-----VSHVGGDMFD-A---IPNADAVFMK 88 (90)
Q Consensus 65 --~~r-----v~~~~~d~~~-~---~p~~D~i~l~ 88 (90)
.+. ..+..+|.+. + ...+|+|+.+
T Consensus 234 ~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~N 268 (541)
T 2ar0_A 234 HDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATN 268 (541)
T ss_dssp TTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEEC
T ss_pred hCCCccccccCCeEeCCCcccccccccCCeEEEEC
Confidence 122 7889999987 2 2349999875
No 277
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.18 E-value=6.5e-06 Score=56.45 Aligned_cols=78 Identities=17% Similarity=0.158 Sum_probs=62.6
Q ss_pred hHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHC-CCCeEEEeeh-HHHHHhCCC--CCCeeEEEecCCC-C----
Q 034578 8 TMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSY-PHIKGINFDL-QHVIATAPT--HEGVSHVGGDMFD-A---- 78 (90)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-p~~~~~a~~--~~rv~~~~~d~~~-~---- 78 (90)
+.+.+++.+. ..+...++|..+|.|..+..++++. |+.+++++|. |.+++.++. .+|++++.++|.+ .
T Consensus 45 Ll~Evl~~L~---i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~~l~~~L~ 121 (347)
T 3tka_A 45 LLDEAVNGLN---IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGEYVA 121 (347)
T ss_dssp TTHHHHHHTC---CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHTTCCCTTEEEEESCGGGHHHHHH
T ss_pred cHHHHHHhhC---CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHH
Confidence 3466677776 5567899999999999999999985 8899999999 999998854 4789999999876 1
Q ss_pred ---CC-cccEEEee
Q 034578 79 ---IP-NADAVFMK 88 (90)
Q Consensus 79 ---~p-~~D~i~l~ 88 (90)
++ .+|.|++.
T Consensus 122 ~~g~~~~vDgILfD 135 (347)
T 3tka_A 122 ERDLIGKIDGILLD 135 (347)
T ss_dssp HTTCTTCEEEEEEE
T ss_pred hcCCCCcccEEEEC
Confidence 22 37888763
No 278
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.15 E-value=9.2e-07 Score=63.70 Aligned_cols=77 Identities=17% Similarity=0.104 Sum_probs=54.8
Q ss_pred hHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCC---------------CCeEEEeeh-HHHHHhCCC-------
Q 034578 8 TMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYP---------------HIKGINFDL-QHVIATAPT------- 64 (90)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p---------------~~~~~~~D~-p~~~~~a~~------- 64 (90)
+++.+++.+. .. ..+|+|.+||||.++..+.+..+ ..++.++|+ |.+++.|+.
T Consensus 233 Vv~lmv~ll~---p~-~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi 308 (544)
T 3khk_A 233 IVTLIVEMLE---PY-KGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGI 308 (544)
T ss_dssp HHHHHHHHHC---CC-SEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHh---cC-CCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCC
Confidence 4455555554 22 34999999999999998865432 568999999 998888764
Q ss_pred CCCeeEEEecCCC-C-CC--cccEEEee
Q 034578 65 HEGVSHVGGDMFD-A-IP--NADAVFMK 88 (90)
Q Consensus 65 ~~rv~~~~~d~~~-~-~p--~~D~i~l~ 88 (90)
..++.+..+|.+. + .+ .+|+|+.+
T Consensus 309 ~~~i~i~~gDtL~~~~~~~~~fD~Iv~N 336 (544)
T 3khk_A 309 DFNFGKKNADSFLDDQHPDLRADFVMTN 336 (544)
T ss_dssp CCBCCSSSCCTTTSCSCTTCCEEEEEEC
T ss_pred CcccceeccchhcCcccccccccEEEEC
Confidence 2345557899887 3 22 39999875
No 279
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.14 E-value=2.6e-06 Score=61.40 Aligned_cols=66 Identities=21% Similarity=0.239 Sum_probs=53.3
Q ss_pred CCCeEEEecCCchHHHHHHHHHC---CCCeEEEeeh-HHHHHhCCCC--------CCeeEEEecCCCC-CC-----cccE
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSY---PHIKGINFDL-QHVIATAPTH--------EGVSHVGGDMFDA-IP-----NADA 84 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~---p~~~~~~~D~-p~~~~~a~~~--------~rv~~~~~d~~~~-~p-----~~D~ 84 (90)
...+|+|-+||||.++..+.+.. +..++.++|+ |.++..|+.+ ++..+..+|.+.. +| .+|+
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~ 300 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDG 300 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSE
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccE
Confidence 45699999999999999999885 3678999999 9988887641 4678999999873 22 2999
Q ss_pred EEee
Q 034578 85 VFMK 88 (90)
Q Consensus 85 i~l~ 88 (90)
|+.+
T Consensus 301 IvaN 304 (542)
T 3lkd_A 301 VLMN 304 (542)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9875
No 280
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.12 E-value=2.2e-06 Score=63.56 Aligned_cols=64 Identities=22% Similarity=0.225 Sum_probs=46.5
Q ss_pred CCeEEEecCCchHHHHHHHHHC-------------CCCeEEEeeh-HHHHHhCCC------CCCeeEEEecCCC-CC---
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSY-------------PHIKGINFDL-QHVIATAPT------HEGVSHVGGDMFD-AI--- 79 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~-------------p~~~~~~~D~-p~~~~~a~~------~~rv~~~~~d~~~-~~--- 79 (90)
...|+|||||+|-++...+++. ...+++++|. |.++...+. .++|+++.+|+.+ .+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccc
Confidence 4689999999999975433221 2458999998 765533222 4789999999988 55
Q ss_pred ---Cc-ccEEEe
Q 034578 80 ---PN-ADAVFM 87 (90)
Q Consensus 80 ---p~-~D~i~l 87 (90)
|+ +|+|+.
T Consensus 490 ~~~~ekVDIIVS 501 (745)
T 3ua3_A 490 DRGFEQPDIIVS 501 (745)
T ss_dssp HTTCCCCSEEEE
T ss_pred cCCCCcccEEEE
Confidence 44 999985
No 281
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.09 E-value=7.2e-06 Score=53.97 Aligned_cols=77 Identities=14% Similarity=0.108 Sum_probs=54.6
Q ss_pred hHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCC--C---CCCeeEEEe-cCCC-CC
Q 034578 8 TMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAP--T---HEGVSHVGG-DMFD-AI 79 (90)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~--~---~~rv~~~~~-d~~~-~~ 79 (90)
.-..+.+.+. +.+..+|+|+||++|.++...+......++.++|+ +.-.+.-+ + -+.++|..+ |++. +.
T Consensus 66 KL~ei~ek~~---l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~~ 142 (267)
T 3p8z_A 66 KLQWFVERNM---VIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLPP 142 (267)
T ss_dssp HHHHHHHTTS---SCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCCC
T ss_pred HHHHHHHhcC---CCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcCceEEEeccceeecCC
Confidence 3445555554 66677999999999999998888877668999997 33222111 1 267999999 9765 22
Q ss_pred CcccEEEe
Q 034578 80 PNADAVFM 87 (90)
Q Consensus 80 p~~D~i~l 87 (90)
..+|++++
T Consensus 143 ~~~Dtllc 150 (267)
T 3p8z_A 143 EKCDTLLC 150 (267)
T ss_dssp CCCSEEEE
T ss_pred ccccEEEE
Confidence 23899876
No 282
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.07 E-value=5.3e-06 Score=62.45 Aligned_cols=67 Identities=16% Similarity=0.247 Sum_probs=49.1
Q ss_pred CCCCeEEEecCCchHHHHHHHHHCC---CCeEEEeeh-HHHHHhC--CC----------CCCeeEEEecCCCC----CCc
Q 034578 22 NNIRSMVDVGGGTGTVLAEIVKSYP---HIKGINFDL-QHVIATA--PT----------HEGVSHVGGDMFDA----IPN 81 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~~~~p---~~~~~~~D~-p~~~~~a--~~----------~~rv~~~~~d~~~~----~p~ 81 (90)
....+|+|.|||+|.++.+++++.+ ..+++++|+ |.+++.| +. .....+...|++++ ...
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~k 399 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFAN 399 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCC
Confidence 3467999999999999999999876 467999999 8888776 21 12235556667652 223
Q ss_pred ccEEEee
Q 034578 82 ADAVFMK 88 (90)
Q Consensus 82 ~D~i~l~ 88 (90)
+|+|+.+
T Consensus 400 FDVVIgN 406 (878)
T 3s1s_A 400 VSVVVMN 406 (878)
T ss_dssp EEEEEEC
T ss_pred CCEEEEC
Confidence 9999874
No 283
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.93 E-value=6.3e-06 Score=57.21 Aligned_cols=64 Identities=23% Similarity=0.260 Sum_probs=52.1
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC--------------CCCeeEEEecCCCCC-------C
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT--------------HEGVSHVGGDMFDAI-------P 80 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~--------------~~rv~~~~~d~~~~~-------p 80 (90)
++++||=||+|.|..+.++++. |..+++.+|+ |.+++.+++ .+|++++.+|.++.+ .
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh-~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL-KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCeEEEECCCcHHHHHHHHhc-CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 4689999999999999999985 5588999999 999988764 156899999987522 2
Q ss_pred cccEEEe
Q 034578 81 NADAVFM 87 (90)
Q Consensus 81 ~~D~i~l 87 (90)
.||+|++
T Consensus 284 ~yDvIIv 290 (381)
T 3c6k_A 284 EFDYVIN 290 (381)
T ss_dssp CEEEEEE
T ss_pred ceeEEEE
Confidence 3899986
No 284
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.91 E-value=1.5e-05 Score=54.79 Aligned_cols=69 Identities=10% Similarity=0.078 Sum_probs=51.7
Q ss_pred hhhHHHHHhhcccCCCC------CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCC---CCCCeeEEEecC
Q 034578 6 KITMKAFVSHYKVDGFN------NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAP---THEGVSHVGGDM 75 (90)
Q Consensus 6 ~~~~~~~~~~~~~~~~~------~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~---~~~rv~~~~~d~ 75 (90)
..+++.|++... .. +...||+||.|.|.++..|+++....+++++|+ +..++.-+ ..++++++.+|+
T Consensus 38 ~~i~~~Iv~~~~---l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~ 114 (353)
T 1i4w_A 38 PTVYNKIFDKLD---LTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDP 114 (353)
T ss_dssp HHHHHHHHHHHC---GGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTTTSSCEEECSCT
T ss_pred HHHHHHHHHhcc---CCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhccCCCEEEEECCc
Confidence 345677777665 32 247899999999999999999754567888887 65544332 357899999999
Q ss_pred CC
Q 034578 76 FD 77 (90)
Q Consensus 76 ~~ 77 (90)
++
T Consensus 115 l~ 116 (353)
T 1i4w_A 115 YD 116 (353)
T ss_dssp TC
T ss_pred cc
Confidence 76
No 285
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.90 E-value=1.4e-05 Score=53.22 Aligned_cols=52 Identities=17% Similarity=0.154 Sum_probs=41.6
Q ss_pred hhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 7 ITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
.+.+.+++.+. .+...|||.+||+|.++.++++. +.+++++|+ |.+++.|++
T Consensus 223 ~l~~~~i~~~~----~~~~~vlD~f~GsGt~~~~a~~~--g~~~~g~e~~~~~~~~a~~ 275 (297)
T 2zig_A 223 ELAERLVRMFS----FVGDVVLDPFAGTGTTLIAAARW--GRRALGVELVPRYAQLAKE 275 (297)
T ss_dssp HHHHHHHHHHC----CTTCEEEETTCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHhC----CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHH
Confidence 45566666554 24579999999999999998886 468999999 999888765
No 286
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.90 E-value=2.4e-05 Score=52.29 Aligned_cols=44 Identities=18% Similarity=0.113 Sum_probs=35.1
Q ss_pred HHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh
Q 034578 9 MKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL 55 (90)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~ 55 (90)
-..+.+.+. +.+..+|||+|||+|.++..++++.+...++++|+
T Consensus 79 L~ei~eK~~---Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~Gvdv 122 (282)
T 3gcz_A 79 LRWMEERGY---VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTL 122 (282)
T ss_dssp HHHHHHTTS---CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECC
T ss_pred HHHHHHhcC---CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEe
Confidence 344455553 66677999999999999999998887777889997
No 287
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.84 E-value=5.2e-05 Score=50.58 Aligned_cols=67 Identities=10% Similarity=0.013 Sum_probs=42.6
Q ss_pred CCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC----CCeeEEEecCCC-CCC--cccEEEe
Q 034578 21 FNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH----EGVSHVGGDMFD-AIP--NADAVFM 87 (90)
Q Consensus 21 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~----~rv~~~~~d~~~-~~p--~~D~i~l 87 (90)
+.+..+|||+|||+|.++..++++.+..++.++|+ -......... .++..+..++.. .++ .+|+|+.
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DlVls 146 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHRLEPVKCDTLLC 146 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCCCCeEEEeccceehhcCCCCccEEEe
Confidence 56667999999999999999988776666777776 3321111111 144445555422 343 2899875
No 288
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.75 E-value=9.4e-06 Score=49.57 Aligned_cols=53 Identities=4% Similarity=-0.057 Sum_probs=41.5
Q ss_pred CCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC--CCeeEEEecCCC-CC---Cc--ccEEEeec
Q 034578 21 FNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH--EGVSHVGGDMFD-AI---PN--ADAVFMKV 89 (90)
Q Consensus 21 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~--~rv~~~~~d~~~-~~---p~--~D~i~l~~ 89 (90)
..+..+|||||||. +.+|+ +.|++.++++ .++++..+|+.+ +. +. ||+|++++
T Consensus 10 ~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~ 71 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGL 71 (176)
T ss_dssp CCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECC
T ss_pred CCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECC
Confidence 55678999999996 23898 9999988763 469999999976 43 43 99999864
No 289
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.73 E-value=7.5e-05 Score=50.49 Aligned_cols=76 Identities=13% Similarity=0.153 Sum_probs=51.4
Q ss_pred HHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHh---CCC--CCCeeEEEe-cCCC-CCC
Q 034578 9 MKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIAT---APT--HEGVSHVGG-DMFD-AIP 80 (90)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~---a~~--~~rv~~~~~-d~~~-~~p 80 (90)
-..+.+.+. +.....|||+||++|.++..++......++.++|+ ..-.+. .++ -.-+.+..+ |++. +..
T Consensus 83 L~ei~~~~~---l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~~ 159 (321)
T 3lkz_A 83 LRWLVERRF---LEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPSE 159 (321)
T ss_dssp HHHHHHTTS---CCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCCC
T ss_pred HHHHHHhcC---CCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCCC
Confidence 345555544 56667999999999999998888776667999997 331110 011 134888888 8765 222
Q ss_pred cccEEEe
Q 034578 81 NADAVFM 87 (90)
Q Consensus 81 ~~D~i~l 87 (90)
.+|++++
T Consensus 160 ~~D~ivc 166 (321)
T 3lkz_A 160 CCDTLLC 166 (321)
T ss_dssp CCSEEEE
T ss_pred CCCEEEE
Confidence 3888875
No 290
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.53 E-value=0.00012 Score=48.60 Aligned_cols=75 Identities=17% Similarity=0.074 Sum_probs=44.5
Q ss_pred HHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCC----CeEEEeehHHHHHhCCCCCCe---eEEEe-cCCCCCC
Q 034578 9 MKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPH----IKGINFDLQHVIATAPTHEGV---SHVGG-DMFDAIP 80 (90)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~----~~~~~~D~p~~~~~a~~~~rv---~~~~~-d~~~~~p 80 (90)
-.+|-+.+- +.+..+|||+||++|..+...++.-+- ..++++|+ +..........+ .|..+ ||++.-+
T Consensus 62 L~EIdeK~l---ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~~~P~~~~~~Gv~~i~~~~G~Df~~~~~ 137 (269)
T 2px2_A 62 LRWLVERRF---VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-HEEPMLMQSYGWNIVTMKSGVDVFYKPS 137 (269)
T ss_dssp HHHHHHTTS---CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-SCCCCCCCSTTGGGEEEECSCCGGGSCC
T ss_pred HHHHHHcCC---CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-ccCCCcccCCCceEEEeeccCCccCCCC
Confidence 344444432 677889999999999999999986222 12344442 111111111344 55557 9987323
Q ss_pred -cccEEEe
Q 034578 81 -NADAVFM 87 (90)
Q Consensus 81 -~~D~i~l 87 (90)
.+|+|+.
T Consensus 138 ~~~DvVLS 145 (269)
T 2px2_A 138 EISDTLLC 145 (269)
T ss_dssp CCCSEEEE
T ss_pred CCCCEEEe
Confidence 3899875
No 291
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.45 E-value=7.5e-05 Score=49.12 Aligned_cols=34 Identities=21% Similarity=0.347 Sum_probs=27.6
Q ss_pred CCCeEEEecCCchHHHHHHHHH-------CCC-----CeEEEeeh-H
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKS-------YPH-----IKGINFDL-Q 56 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~-------~p~-----~~~~~~D~-p 56 (90)
+..+|||+|+|+|..+..+++. .|+ ++++.+|. |
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p 106 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFP 106 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSC
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCc
Confidence 3478999999999988887665 674 68999997 6
No 292
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.38 E-value=0.002 Score=44.53 Aligned_cols=66 Identities=21% Similarity=0.317 Sum_probs=44.4
Q ss_pred CCeEEEecCCchHHHHHH--------HHHC-------CCCeEEEeehHH-H-------HHhCCC-----------CCC--
Q 034578 24 IRSMVDVGGGTGTVLAEI--------VKSY-------PHIKGINFDLQH-V-------IATAPT-----------HEG-- 67 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l--------~~~~-------p~~~~~~~D~p~-~-------~~~a~~-----------~~r-- 67 (90)
.-+|+|+|||+|..+..+ .+++ |..++..-|+|. . +...++ ..+
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 478999999999987776 3343 889999999854 1 222211 011
Q ss_pred -eeEEEecCCC-CCCc--ccEEEeec
Q 034578 68 -VSHVGGDMFD-AIPN--ADAVFMKV 89 (90)
Q Consensus 68 -v~~~~~d~~~-~~p~--~D~i~l~~ 89 (90)
+.-++++|+. .+|. +|+++.+.
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~ 158 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAF 158 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEES
T ss_pred EEEecChhhhcccCCCcceEEEEecc
Confidence 4556778887 4564 89988764
No 293
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.29 E-value=0.00077 Score=42.99 Aligned_cols=51 Identities=12% Similarity=0.082 Sum_probs=37.3
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC---------CCCeeEEEecCC
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT---------HEGVSHVGGDMF 76 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~---------~~rv~~~~~d~~ 76 (90)
+..+||++||| .-++.+++ .++.+++.+|. ++..+.+++ .++++++.+|..
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~-~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~ 90 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAE-LPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIG 90 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHT-STTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCS
T ss_pred CCCEEEEECch--HHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCch
Confidence 56899999985 44444444 46789999998 777666653 347999999954
No 294
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.10 E-value=0.0007 Score=48.61 Aligned_cols=78 Identities=13% Similarity=0.057 Sum_probs=53.5
Q ss_pred hHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHC-------------CCCeEEEeeh-HHHHHhCCC------CCC
Q 034578 8 TMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSY-------------PHIKGINFDL-QHVIATAPT------HEG 67 (90)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-------------p~~~~~~~D~-p~~~~~a~~------~~r 67 (90)
+++.+++.+. .....+|+|-.||||.++....+.. ...+..++|+ |.+...|+- .+.
T Consensus 205 Vv~lmv~l~~---p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~ 281 (530)
T 3ufb_A 205 VVRFMVEVMD---PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEY 281 (530)
T ss_dssp HHHHHHHHHC---CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSC
T ss_pred HHHHHHHhhc---cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCcc
Confidence 4455555555 4455689999999999998776532 2356899999 888777763 234
Q ss_pred eeEEEecCCC-CC----C--cccEEEee
Q 034578 68 VSHVGGDMFD-AI----P--NADAVFMK 88 (90)
Q Consensus 68 v~~~~~d~~~-~~----p--~~D~i~l~ 88 (90)
..+..+|.+. +. + .||+|+.+
T Consensus 282 ~~I~~~dtL~~~~~~~~~~~~fD~Il~N 309 (530)
T 3ufb_A 282 PRIDPENSLRFPLREMGDKDRVDVILTN 309 (530)
T ss_dssp CEEECSCTTCSCGGGCCGGGCBSEEEEC
T ss_pred ccccccccccCchhhhcccccceEEEec
Confidence 4667788775 21 1 28999865
No 295
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.06 E-value=0.00088 Score=43.69 Aligned_cols=52 Identities=17% Similarity=0.082 Sum_probs=40.4
Q ss_pred hhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 7 ITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
.+.+.+++.+. .+...|||..||+|..+.+..+. +-+++++|+ |..++.+++
T Consensus 200 ~l~~~~i~~~~----~~~~~vlD~f~GsGtt~~~a~~~--gr~~ig~e~~~~~~~~~~~ 252 (260)
T 1g60_A 200 DLIERIIRASS----NPNDLVLDCFMGSGTTAIVAKKL--GRNFIGCDMNAEYVNQANF 252 (260)
T ss_dssp HHHHHHHHHHC----CTTCEEEESSCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHhC----CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHH
Confidence 34556665554 34579999999999999998887 568999999 888877654
No 296
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=96.66 E-value=0.0028 Score=42.69 Aligned_cols=35 Identities=14% Similarity=0.152 Sum_probs=30.6
Q ss_pred CCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh
Q 034578 21 FNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL 55 (90)
Q Consensus 21 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~ 55 (90)
+.+..++||+||++|.++..++++.+...+.++|+
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdl 113 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTL 113 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECC
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEe
Confidence 56678999999999999999998777667888887
No 297
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=96.47 E-value=0.006 Score=42.43 Aligned_cols=55 Identities=13% Similarity=0.209 Sum_probs=35.6
Q ss_pred hhhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHC-------CCCeEEEeeh-HHHHH
Q 034578 6 KITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSY-------PHIKGINFDL-QHVIA 60 (90)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-------p~~~~~~~D~-p~~~~ 60 (90)
+.++..+++.+...+.+.+-.|+++|.|+|.++..+++.. ..+++..+|. |...+
T Consensus 63 e~la~~~~~~w~~~g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~ 125 (387)
T 1zkd_A 63 ELLGLWSASVWKAADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQ 125 (387)
T ss_dssp HHHHHHHHHHHHHTTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHH
Confidence 3444555554331012334579999999999999888652 3458999998 65443
No 298
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=96.43 E-value=0.0041 Score=42.25 Aligned_cols=55 Identities=15% Similarity=0.339 Sum_probs=46.2
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCC---------------------------CCCeeEEEecC
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPT---------------------------HEGVSHVGGDM 75 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~---------------------------~~rv~~~~~d~ 75 (90)
+...|+.+|||.....-.+...+|++++.-+|+|++++.-++ .++.+++..|+
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~DL 176 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDL 176 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECCT
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecCC
Confidence 457899999999999999999888999999999887664321 26899999999
Q ss_pred CC
Q 034578 76 FD 77 (90)
Q Consensus 76 ~~ 77 (90)
.+
T Consensus 177 ~d 178 (334)
T 1rjd_A 177 ND 178 (334)
T ss_dssp TC
T ss_pred CC
Confidence 87
No 299
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.40 E-value=0.0078 Score=41.78 Aligned_cols=41 Identities=20% Similarity=0.245 Sum_probs=33.9
Q ss_pred CCCCeEEEecCCchHHHHHHH-HHCCC-CeEEEeeh-HHHHHhC
Q 034578 22 NNIRSMVDVGGGTGTVLAEIV-KSYPH-IKGINFDL-QHVIATA 62 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~-~~~p~-~~~~~~D~-p~~~~~a 62 (90)
.+...++|||++.|.++..++ +..+. .+++++|. |...+..
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L 268 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTL 268 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHH
Confidence 466899999999999999988 66765 89999997 7765544
No 300
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=96.37 E-value=0.0042 Score=42.69 Aligned_cols=67 Identities=15% Similarity=0.038 Sum_probs=49.9
Q ss_pred CCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC------------CCCeeEEEecCCC--C-CCc-cc
Q 034578 21 FNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT------------HEGVSHVGGDMFD--A-IPN-AD 83 (90)
Q Consensus 21 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~------------~~rv~~~~~d~~~--~-~p~-~D 83 (90)
..+..+|||+++|+|.=+..++...+..++++.|+ +.-++..++ ..++.+...|... . .+. ||
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD 225 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYD 225 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEE
T ss_pred CCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCC
Confidence 45678999999999999999999888778999998 654443321 2468888888765 1 233 89
Q ss_pred EEEe
Q 034578 84 AVFM 87 (90)
Q Consensus 84 ~i~l 87 (90)
.|++
T Consensus 226 ~VLl 229 (359)
T 4fzv_A 226 RVLV 229 (359)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9886
No 301
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=96.23 E-value=0.019 Score=38.19 Aligned_cols=66 Identities=18% Similarity=0.060 Sum_probs=45.9
Q ss_pred CCCCeEEEecCCchHHHHHHHHHC-----CCCeEEEeeh-HH--------------------------HHHhCCC-----
Q 034578 22 NNIRSMVDVGGGTGTVLAEIVKSY-----PHIKGINFDL-QH--------------------------VIATAPT----- 64 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~~~~-----p~~~~~~~D~-p~--------------------------~~~~a~~----- 64 (90)
..++.||++|+..|.-++.+++.. |+.+++++|. +. .++.+++
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 346899999999999887776654 5788999993 11 1122221
Q ss_pred ---CCCeeEEEecCCCC---CC--cccEEEe
Q 034578 65 ---HEGVSHVGGDMFDA---IP--NADAVFM 87 (90)
Q Consensus 65 ---~~rv~~~~~d~~~~---~p--~~D~i~l 87 (90)
.++++++.||+.+. ++ .+|++++
T Consensus 185 gl~~~~I~li~Gda~etL~~~~~~~~d~vfI 215 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRM 215 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTCCCCCEEEEEE
T ss_pred CCCcCceEEEEeCHHHHHhhCCCCCEEEEEE
Confidence 27899999999773 33 2788775
No 302
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=96.04 E-value=0.0049 Score=42.77 Aligned_cols=66 Identities=17% Similarity=0.226 Sum_probs=43.3
Q ss_pred CCeEEEecCCchHHHHHHHHH-----------------CCCCeEEEeehHH------------HHHhCCC----CCC---
Q 034578 24 IRSMVDVGGGTGTVLAEIVKS-----------------YPHIKGINFDLQH------------VIATAPT----HEG--- 67 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~-----------------~p~~~~~~~D~p~------------~~~~a~~----~~r--- 67 (90)
.-+|+|+||++|..+..+... .|..++..-|+|. ..+..++ ..+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 578999999999988877766 5788999999872 1111100 112
Q ss_pred eeEEEecCCC-CCCc--ccEEEeec
Q 034578 68 VSHVGGDMFD-AIPN--ADAVFMKV 89 (90)
Q Consensus 68 v~~~~~d~~~-~~p~--~D~i~l~~ 89 (90)
+.-++|.|+. -+|. +|+++.+.
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~ 157 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCY 157 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEES
T ss_pred EEecchhhhhccCCCCceEEEEecc
Confidence 3334567777 3564 89987664
No 303
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=95.71 E-value=0.0045 Score=41.41 Aligned_cols=62 Identities=11% Similarity=0.068 Sum_probs=50.2
Q ss_pred CCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC----CCeeEEEecCCCC----CC---cccEEEe
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH----EGVSHVGGDMFDA----IP---NADAVFM 87 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~----~rv~~~~~d~~~~----~p---~~D~i~l 87 (90)
...+||+=+|||.+++++++ +.-+++.+|+ |..++..+++ ++++++..|.++. .| .+|+|++
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS--~~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfi 165 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLR--SQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFI 165 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSC--TTSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEE
T ss_pred CCCceeEeCCcHHHHHHHcC--CCCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEE
Confidence 45689999999999999999 4578999999 8888776663 6799999997651 22 3899986
No 304
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=95.18 E-value=0.024 Score=38.42 Aligned_cols=64 Identities=9% Similarity=0.065 Sum_probs=47.4
Q ss_pred CeEEEecCCchHHHHHHHHHCCC-CeEEEeeh-HHHHHhCCCC-CCeeEEEecCCCC----CC--cccEEEee
Q 034578 25 RSMVDVGGGTGTVLAEIVKSYPH-IKGINFDL-QHVIATAPTH-EGVSHVGGDMFDA----IP--NADAVFMK 88 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-p~~~~~a~~~-~rv~~~~~d~~~~----~p--~~D~i~l~ 88 (90)
.+++|+-||.|.++..+.++.-. -.+.++|+ +.+++..+.+ +...++.+|+.+- ++ .+|+++.+
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~g 75 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMS 75 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEEC
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEEc
Confidence 47999999999999999998532 24788998 8888776653 4456778888762 23 37888764
No 305
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=94.89 E-value=0.027 Score=38.29 Aligned_cols=59 Identities=17% Similarity=0.220 Sum_probs=38.5
Q ss_pred CCCCeEEEecC------CchHHHHHHHHHCCC-CeEEEeehHHHHHhCCCCCCeeEEEecCCC-CCC-cccEEEe
Q 034578 22 NNIRSMVDVGG------GTGTVLAEIVKSYPH-IKGINFDLQHVIATAPTHEGVSHVGGDMFD-AIP-NADAVFM 87 (90)
Q Consensus 22 ~~~~~vlDvG~------G~G~~~~~l~~~~p~-~~~~~~D~p~~~~~a~~~~rv~~~~~d~~~-~~p-~~D~i~l 87 (90)
+...+|||+|+ .+|.. .+.+..|. ..++.+|+.++... .. .++.||+.+ ... .+|+|+.
T Consensus 108 p~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~sd----a~-~~IqGD~~~~~~~~k~DLVIS 175 (344)
T 3r24_A 108 PYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVSD----AD-STLIGDCATVHTANKWDLIIS 175 (344)
T ss_dssp CTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBCS----SS-EEEESCGGGEEESSCEEEEEE
T ss_pred cCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCcccccC----CC-eEEEccccccccCCCCCEEEe
Confidence 34579999995 78884 33344776 69999998333221 12 558899765 222 3898874
No 306
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=94.38 E-value=0.058 Score=37.14 Aligned_cols=62 Identities=19% Similarity=0.234 Sum_probs=46.1
Q ss_pred CeEEEecCCchHHHHHHHHHCCCCe-EEEeeh-HHHHHhCCCC-CCeeEEEecCCCC----C-------CcccEEEee
Q 034578 25 RSMVDVGGGTGTVLAEIVKSYPHIK-GINFDL-QHVIATAPTH-EGVSHVGGDMFDA----I-------PNADAVFMK 88 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~p~~~-~~~~D~-p~~~~~a~~~-~rv~~~~~d~~~~----~-------p~~D~i~l~ 88 (90)
-+++|+-||.|.++..+.++. .+ +.++|+ +.+++..+.+ +...++.+|+.+- + +.+|+++.+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG--~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~gg 78 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAG--FDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGG 78 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHT--CEEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEEC
T ss_pred CeEEEEccCcCHHHHHHHHCC--CcEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEec
Confidence 379999999999999999884 54 568998 8877765543 5667788888652 1 247888764
No 307
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=94.27 E-value=0.041 Score=37.15 Aligned_cols=61 Identities=13% Similarity=0.119 Sum_probs=42.8
Q ss_pred CCeEEEecCCchHHHHHHHHHCCCCe-EEEeeh-HHHHHhCCCC-CCeeEEEecCCC----CCCcccEEEee
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSYPHIK-GINFDL-QHVIATAPTH-EGVSHVGGDMFD----AIPNADAVFMK 88 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~p~~~-~~~~D~-p~~~~~a~~~-~rv~~~~~d~~~----~~p~~D~i~l~ 88 (90)
.-+++|+-||.|.++..+.++. .+ +.++|+ +.+++.-+.+ +... .+|+.+ .++.+|+++.+
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG--~~~v~~~e~d~~a~~t~~~N~~~~~--~~Di~~~~~~~~~~~D~l~~g 78 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCG--AECVYSNEWDKYAQEVYEMNFGEKP--EGDITQVNEKTIPDHDILCAG 78 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTT--CEEEEEECCCHHHHHHHHHHHSCCC--BSCGGGSCGGGSCCCSEEEEE
T ss_pred CCcEEEECCCcCHHHHHHHHCC--CeEEEEEeCCHHHHHHHHHHcCCCC--cCCHHHcCHhhCCCCCEEEEC
Confidence 3689999999999999999873 44 667898 8777655442 1111 467665 24558888765
No 308
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=94.09 E-value=0.0096 Score=40.97 Aligned_cols=67 Identities=18% Similarity=0.273 Sum_probs=41.8
Q ss_pred CCCeEEEecCCchHHHHHHHHH----------------CCCCeEEEeehHH-HHH---hC-CC---CCC---eeEEEecC
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKS----------------YPHIKGINFDLQH-VIA---TA-PT---HEG---VSHVGGDM 75 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~----------------~p~~~~~~~D~p~-~~~---~a-~~---~~r---v~~~~~d~ 75 (90)
+.-+|+|+||++|..+..+... .|..++..-|+|. ... .. .. ..+ +.-++|.|
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 4467999999999655433322 5788999999854 221 11 11 112 34456788
Q ss_pred CC-CCCc--ccEEEeec
Q 034578 76 FD-AIPN--ADAVFMKV 89 (90)
Q Consensus 76 ~~-~~p~--~D~i~l~~ 89 (90)
+. -+|. .|+++.+.
T Consensus 131 y~rlfp~~S~d~v~Ss~ 147 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSY 147 (359)
T ss_dssp SSCCSCTTCBSCEEEES
T ss_pred hhccCCCCceEEEEehh
Confidence 87 4565 89887653
No 309
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=93.36 E-value=0.15 Score=34.13 Aligned_cols=52 Identities=19% Similarity=0.206 Sum_probs=40.1
Q ss_pred hhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 7 ITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
.+.+.+++.+. .+...|||-=||+|..+.+..+. +-+.+++|+ |..++.+++
T Consensus 240 ~l~~~~i~~~~----~~~~~VlDpF~GsGtt~~aa~~~--gr~~ig~e~~~~~~~~~~~ 292 (323)
T 1boo_A 240 KLPEFFIRMLT----EPDDLVVDIFGGSNTTGLVAERE--SRKWISFEMKPEYVAASAF 292 (323)
T ss_dssp HHHHHHHHHHC----CTTCEEEETTCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHG
T ss_pred HHHHHHHHHhC----CCCCEEEECCCCCCHHHHHHHHc--CCCEEEEeCCHHHHHHHHH
Confidence 34555665543 34578999999999999998887 578999999 888777654
No 310
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.09 E-value=0.26 Score=28.47 Aligned_cols=62 Identities=18% Similarity=0.205 Sum_probs=40.1
Q ss_pred CCeEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCCC-------CCcccEEEee
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATAPTHEGVSHVGGDMFDA-------IPNADAVFMK 88 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~~-------~p~~D~i~l~ 88 (90)
..+++=+|+|. ++..+++.. .+.+++++|. |+.++..++. ...++.+|..++ +..+|+++..
T Consensus 6 ~~~v~I~G~G~--iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~-~~~~~~gd~~~~~~l~~~~~~~~d~vi~~ 77 (141)
T 3llv_A 6 RYEYIVIGSEA--AGVGLVRELTAAGKKVLAVDKSKEKIELLEDE-GFDAVIADPTDESFYRSLDLEGVSAVLIT 77 (141)
T ss_dssp CCSEEEECCSH--HHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT-TCEEEECCTTCHHHHHHSCCTTCSEEEEC
T ss_pred CCEEEEECCCH--HHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC-CCcEEECCCCCHHHHHhCCcccCCEEEEe
Confidence 35788899853 444444432 2568999998 7766655433 467888998762 2347887753
No 311
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=92.87 E-value=0.1 Score=35.01 Aligned_cols=53 Identities=19% Similarity=0.213 Sum_probs=40.4
Q ss_pred CCCeEEEecCCchHHHHHHHHHCC-CCeEEEeehHHHHHhCC---------CCCCeeEEEecCCC
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYP-HIKGINFDLQHVIATAP---------THEGVSHVGGDMFD 77 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~p~~~~~a~---------~~~rv~~~~~d~~~ 77 (90)
+...||++|||-=.....+. +| ..+++-+|.|.+++..+ ..++..++..|+.+
T Consensus 102 g~~QvV~LGaGlDTra~Rl~--~~~~~~v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d 164 (310)
T 2uyo_A 102 GIRQFVILASGLDSRAYRLD--WPTGTTVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ 164 (310)
T ss_dssp TCCEEEEETCTTCCHHHHSC--CCTTCEEEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS
T ss_pred CCCeEEEeCCCCCchhhhcc--CCCCcEEEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHh
Confidence 45679999999888766654 35 47899999998876543 24778999999876
No 312
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=92.58 E-value=0.051 Score=38.33 Aligned_cols=49 Identities=16% Similarity=0.280 Sum_probs=33.1
Q ss_pred hhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCC-----CCeEEEeeh-HHH
Q 034578 7 ITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYP-----HIKGINFDL-QHV 58 (90)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-----~~~~~~~D~-p~~ 58 (90)
.++..+++.+.. .+..+|+++|.|+|.++..+++... ..++..+|. |..
T Consensus 124 ~la~~~~~~~~~---~g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~L 178 (432)
T 4f3n_A 124 TLARPVAQALDA---SGTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGEL 178 (432)
T ss_dssp HHHHHHHHHHHH---HTCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSS
T ss_pred HHHHHHHHHHHh---cCCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHH
Confidence 344444554442 2346899999999999988876542 237899997 543
No 313
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=92.19 E-value=0.63 Score=28.77 Aligned_cols=43 Identities=9% Similarity=0.138 Sum_probs=34.6
Q ss_pred HHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh
Q 034578 9 MKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL 55 (90)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~ 55 (90)
-++.++... .-..-|+|+|=|+|..-..+.+.+|+-.+.++|.
T Consensus 30 L~~a~~~v~----~~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR 72 (174)
T 3iht_A 30 LEHAIAQTA----GLSGPVYELGLGNGRTYHHLRQHVQGREIYVFER 72 (174)
T ss_dssp HHHHHHHTT----TCCSCEEEECCTTCHHHHHHHHHCCSSCEEEEES
T ss_pred HHHHHHHhc----CCCCceEEecCCCChhHHHHHHhCCCCcEEEEEe
Confidence 344444444 2346799999999999999999999999999993
No 314
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=92.00 E-value=1.1 Score=26.28 Aligned_cols=65 Identities=22% Similarity=0.234 Sum_probs=40.1
Q ss_pred CCCeEEEecCCc-hHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCC-----C--CCcccEEEee
Q 034578 23 NIRSMVDVGGGT-GTVLAEIVKSYPHIKGINFDL-QHVIATAPTHEGVSHVGGDMFD-----A--IPNADAVFMK 88 (90)
Q Consensus 23 ~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~-----~--~p~~D~i~l~ 88 (90)
...+++=+|+|. |......+++. +.+++++|. ++.++.+++.....++.+|..+ . +..+|+++..
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~-g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~ 91 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSS-GHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAF 91 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEEC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEE
Confidence 457899999863 44444444443 468999998 7777666622335566677643 1 2347888753
No 315
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=90.80 E-value=0.4 Score=32.18 Aligned_cols=52 Identities=13% Similarity=0.140 Sum_probs=40.4
Q ss_pred hhHHHHHhhcccCCCCCCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh-H---HHHHhCCC
Q 034578 7 ITMKAFVSHYKVDGFNNIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL-Q---HVIATAPT 64 (90)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-p---~~~~~a~~ 64 (90)
.+.+.+++.+. .....|||-=||+|..+.+..+. +-+.+++|+ | ..++.+++
T Consensus 230 ~l~~~~i~~~~----~~~~~vlDpF~GsGtt~~aa~~~--~r~~ig~e~~~~~~~~~~~~~~ 285 (319)
T 1eg2_A 230 AVIERLVRALS----HPGSTVLDFFAGSGVTARVAIQE--GRNSICTDAAPVFKEYYQKQLT 285 (319)
T ss_dssp HHHHHHHHHHS----CTTCEEEETTCTTCHHHHHHHHH--TCEEEEEESSTHHHHHHHHHHH
T ss_pred HHHHHHHHHhC----CCCCEEEecCCCCCHHHHHHHHc--CCcEEEEECCccHHHHHHHHHH
Confidence 45666666554 34679999999999999999988 578999999 7 77766543
No 316
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=90.51 E-value=0.083 Score=35.74 Aligned_cols=64 Identities=17% Similarity=0.209 Sum_probs=43.8
Q ss_pred CCeEEEecCCchHHHHHHHHHCCCCe-E-EEeeh-HHHHHhCCCC-CCeeEEEecCCC-C---CC--cccEEEee
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSYPHIK-G-INFDL-QHVIATAPTH-EGVSHVGGDMFD-A---IP--NADAVFMK 88 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~p~~~-~-~~~D~-p~~~~~a~~~-~rv~~~~~d~~~-~---~p--~~D~i~l~ 88 (90)
.-+++|+-||.|.+...+.++.-..+ + .++|+ +.+.+.-+.+ +.. ++.+|+.+ . ++ .+|+++.+
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-~~~~DI~~~~~~~i~~~~~Dil~gg 83 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE-VQVKNLDSISIKQIESLNCNTWFMS 83 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC-CBCCCTTTCCHHHHHHTCCCEEEEC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC-cccCChhhcCHHHhccCCCCEEEec
Confidence 45899999999999999998742234 4 58998 8777655442 222 55677765 1 33 36888764
No 317
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=90.32 E-value=0.72 Score=31.37 Aligned_cols=45 Identities=13% Similarity=-0.015 Sum_probs=35.6
Q ss_pred CCCCCeEEEecCCc-hHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC
Q 034578 21 FNNIRSMVDVGGGT-GTVLAEIVKSYPHIKGINFDL-QHVIATAPTH 65 (90)
Q Consensus 21 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~ 65 (90)
+....+||-+|+|. |.++..+++..-..+++++|. ++-.+.+++.
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 229 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDA 229 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc
Confidence 55678999999986 899999999864338999997 7777776653
No 318
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=89.31 E-value=0.47 Score=29.50 Aligned_cols=60 Identities=13% Similarity=0.183 Sum_probs=38.7
Q ss_pred EEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCCC-------CCcccEEEee
Q 034578 27 MVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATAPTHEGVSHVGGDMFDA-------IPNADAVFMK 88 (90)
Q Consensus 27 vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~~-------~p~~D~i~l~ 88 (90)
|+=+|+ |.++..+++.. .+..++++|. |+.++...+...+.++.+|..++ +..+|+++..
T Consensus 3 iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 72 (218)
T 3l4b_C 3 VIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVIL 72 (218)
T ss_dssp EEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEEC
T ss_pred EEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEe
Confidence 555665 66666655543 3568999998 77666533333567889998762 3448888763
No 319
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=89.28 E-value=0.17 Score=34.29 Aligned_cols=64 Identities=13% Similarity=0.152 Sum_probs=44.8
Q ss_pred CeEEEecCCchHHHHHHHHHCCCCe-EEEeeh-HHHHHhCCCC-CCeeEEEecCCCC----CC--cccEEEee
Q 034578 25 RSMVDVGGGTGTVLAEIVKSYPHIK-GINFDL-QHVIATAPTH-EGVSHVGGDMFDA----IP--NADAVFMK 88 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~p~~~-~~~~D~-p~~~~~a~~~-~rv~~~~~d~~~~----~p--~~D~i~l~ 88 (90)
-+++|+-||.|.+...+.++.-..+ +.++|+ +.+.+.-+.+ +...++.+|+.+- ++ .+|+++.+
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~~~~~~~~D~l~gg 76 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQVIKKWNVDTILMS 76 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCHHHHHHTTCCEEEEC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCHHHhccCCCCEEEec
Confidence 4799999999999999998853334 568898 7776654432 4455667787651 33 37887754
No 320
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=89.03 E-value=0.64 Score=31.27 Aligned_cols=32 Identities=38% Similarity=0.422 Sum_probs=26.5
Q ss_pred CCeEEEecCCchHHHHH--HHHHCCCCeEEEeeh
Q 034578 24 IRSMVDVGGGTGTVLAE--IVKSYPHIKGINFDL 55 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~--l~~~~p~~~~~~~D~ 55 (90)
.++|+=||+|++.+..+ |++..++++++.+|.
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~ 35 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEP 35 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECS
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeC
Confidence 36899999999886655 777788999999994
No 321
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=88.66 E-value=0.49 Score=31.51 Aligned_cols=67 Identities=18% Similarity=0.128 Sum_probs=46.6
Q ss_pred CCCCeEEEecCCchHHHHHHHHHCCCCe-EEEeeh-HHHHHhCCC-CCCeeEEEecCCCC----CC---cccEEEee
Q 034578 22 NNIRSMVDVGGGTGTVLAEIVKSYPHIK-GINFDL-QHVIATAPT-HEGVSHVGGDMFDA----IP---NADAVFMK 88 (90)
Q Consensus 22 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~-~~~~D~-p~~~~~a~~-~~rv~~~~~d~~~~----~p---~~D~i~l~ 88 (90)
...-+++|+=||.|.+...+.++.-..+ +.++|+ +.+.+.-+. .+...++.+|+.+- ++ .+|+++.+
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~~i~~~~~~Dll~gg 90 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQKHIQEWGPFDLVIGG 90 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHHHHHHTCCCSEEEEC
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHHHhcccCCcCEEEec
Confidence 3456899999999999999998754443 578998 777664333 23446777888651 22 47888754
No 322
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=88.10 E-value=1.4 Score=28.41 Aligned_cols=64 Identities=17% Similarity=0.199 Sum_probs=37.7
Q ss_pred CeEEEecCCc--hHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCCCCCcccEEEee
Q 034578 25 RSMVDVGGGT--GTVLAEIVKSYPHIKGINFDL-QHVIATAPTHEGVSHVGGDMFDAIPNADAVFMK 88 (90)
Q Consensus 25 ~~vlDvG~G~--G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~~~p~~D~i~l~ 88 (90)
.+|.=||+|. +.++..+++..+..+++++|. ++..+.+++.+.......|..+.+..+|+|++.
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVila 73 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILA 73 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEEC
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEc
Confidence 4688899874 335566666555678999998 666554433222111223443334458998874
No 323
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=88.04 E-value=0.49 Score=31.28 Aligned_cols=61 Identities=13% Similarity=0.231 Sum_probs=43.4
Q ss_pred eEEEecCCchHHHHHHHHHCCCCe-EEEeeh-HHHHHhCCCCCCeeEEEecCCC----CCCcccEEEee
Q 034578 26 SMVDVGGGTGTVLAEIVKSYPHIK-GINFDL-QHVIATAPTHEGVSHVGGDMFD----AIPNADAVFMK 88 (90)
Q Consensus 26 ~vlDvG~G~G~~~~~l~~~~p~~~-~~~~D~-p~~~~~a~~~~rv~~~~~d~~~----~~p~~D~i~l~ 88 (90)
+++|+=||.|.+...+.++. .+ +.++|+ +.+.+.-+.+-.-+++.+|+.+ .+|+.|+++.+
T Consensus 2 kvidLFsG~GG~~~G~~~aG--~~~v~a~e~d~~a~~ty~~N~~~~~~~~DI~~i~~~~~~~~D~l~gg 68 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAG--FRIICANEYDKSIWKTYESNHSAKLIKGDISKISSDEFPKCDGIIGG 68 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTT--CEEEEEEECCTTTHHHHHHHCCSEEEESCGGGCCGGGSCCCSEEECC
T ss_pred eEEEeCcCccHHHHHHHHCC--CEEEEEEeCCHHHHHHHHHHCCCCcccCChhhCCHhhCCcccEEEec
Confidence 58999999999999998873 44 457888 7766654443224667788865 25668988753
No 324
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=87.95 E-value=0.95 Score=30.03 Aligned_cols=63 Identities=14% Similarity=0.287 Sum_probs=41.5
Q ss_pred CCeEEEecCCchHHHHHHHHHC---CCCeEEEeeh-HHHHHhCCCCCCeeEEEecCC-CC--CC----cccEEEe
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSY---PHIKGINFDL-QHVIATAPTHEGVSHVGGDMF-DA--IP----NADAVFM 87 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~---p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~-~~--~p----~~D~i~l 87 (90)
..+||=.| |+|.++..++++. ++.++++++. +.-.+......+++++.+|+. +. +. .+|+|+-
T Consensus 24 ~~~vlVtG-atG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih 97 (372)
T 3slg_A 24 AKKVLILG-VNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILP 97 (372)
T ss_dssp CCEEEEES-CSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEE
T ss_pred CCEEEEEC-CCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEE
Confidence 35777665 5777777776654 4678999997 443333233478999999998 52 22 2677763
No 325
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=87.48 E-value=2.4 Score=28.70 Aligned_cols=55 Identities=16% Similarity=0.265 Sum_probs=43.1
Q ss_pred CCCeEEEecCCchHHHHHHHHH-CCCCeEEEeehHHHHHhCC-----------------------------CCCCeeEEE
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKS-YPHIKGINFDLQHVIATAP-----------------------------THEGVSHVG 72 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~-~p~~~~~~~D~p~~~~~a~-----------------------------~~~rv~~~~ 72 (90)
+...|+-+|||.=...-.+... .+.+++.-+|+|++++.=+ ..++.+++.
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~ 169 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIG 169 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEEc
Confidence 4578999999999988888875 3678899999988765311 146789999
Q ss_pred ecCCC
Q 034578 73 GDMFD 77 (90)
Q Consensus 73 ~d~~~ 77 (90)
.|+.+
T Consensus 170 ~DL~d 174 (334)
T 3iei_A 170 ADLRD 174 (334)
T ss_dssp CCTTC
T ss_pred ccccc
Confidence 99876
No 326
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=87.39 E-value=2.5 Score=26.38 Aligned_cols=61 Identities=18% Similarity=0.140 Sum_probs=41.7
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCC--CeEEEeeh-HHHHHhCCCCCCeeEEEecCCCC-------CCcccEEEee
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPH--IKGINFDL-QHVIATAPTHEGVSHVGGDMFDA-------IPNADAVFMK 88 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~--~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~~-------~p~~D~i~l~ 88 (90)
...+++=+|+ |.++..+++..-. . ++++|. |+.++.++ ..+.++.+|..++ +..+|+++..
T Consensus 8 ~~~~viI~G~--G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~--~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (234)
T 2aef_A 8 KSRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKKVLR--SGANFVHGDPTRVSDLEKANVRGARAVIVD 78 (234)
T ss_dssp --CEEEEESC--CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH--TTCEEEESCTTCHHHHHHTTCTTCSEEEEC
T ss_pred CCCEEEEECC--ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh--cCCeEEEcCCCCHHHHHhcCcchhcEEEEc
Confidence 3467888887 6777777777543 4 888898 77666555 4588899998752 3458888753
No 327
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=87.30 E-value=1.3 Score=29.48 Aligned_cols=64 Identities=17% Similarity=0.139 Sum_probs=38.6
Q ss_pred CeEEEecCCc--hHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCC-CCCcccEEEee
Q 034578 25 RSMVDVGGGT--GTVLAEIVKSYPHIKGINFDL-QHVIATAPTHEGVSHVGGDMFD-AIPNADAVFMK 88 (90)
Q Consensus 25 ~~vlDvG~G~--G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~-~~p~~D~i~l~ 88 (90)
.+|.=||+|. +.++..+++.....+++++|. ++.++.+++.+-+.-...|..+ .+..+|+|++.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVila 101 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLS 101 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEe
Confidence 5788999773 345555655543348999998 7776665543322222334433 34558998874
No 328
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=87.11 E-value=1.4 Score=29.62 Aligned_cols=44 Identities=20% Similarity=0.161 Sum_probs=33.7
Q ss_pred CCCCCeEEEecCCc-hHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 21 FNNIRSMVDVGGGT-GTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 21 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
..+..+||-+|+|. |.++..+++..-..+++++|. ++-.+.+++
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~ 233 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ 233 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH
Confidence 55678999999886 889999999864337899997 766666554
No 329
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=86.91 E-value=1.1 Score=28.68 Aligned_cols=64 Identities=13% Similarity=-0.008 Sum_probs=38.6
Q ss_pred CCCeEEEecCCchHHH-HHHHHHCCCCeEEEeeh---HHHHHhCCCCCCeeEEEecCCC-CCCcccEEEee
Q 034578 23 NIRSMVDVGGGTGTVL-AEIVKSYPHIKGINFDL---QHVIATAPTHEGVSHVGGDMFD-AIPNADAVFMK 88 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~-~~l~~~~p~~~~~~~D~---p~~~~~a~~~~rv~~~~~d~~~-~~p~~D~i~l~ 88 (90)
...++|=||+|.=... ...+.+ -++++++++. +...+.+ +..+++++..+|.. .+..+|+|+..
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~-~GA~VtVvap~~~~~l~~l~-~~~~i~~i~~~~~~~dL~~adLVIaA 98 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQ-EGAAITVVAPTVSAEINEWE-AKGQLRVKRKKVGEEDLLNVFFIVVA 98 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGG-GCCCEEEECSSCCHHHHHHH-HTTSCEEECSCCCGGGSSSCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-CCCEEEEECCCCCHHHHHHH-HcCCcEEEECCCCHhHhCCCCEEEEC
Confidence 4578999999843322 222222 2566777763 3333332 24678888887765 46668998864
No 330
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=86.10 E-value=2.7 Score=22.74 Aligned_cols=61 Identities=21% Similarity=0.155 Sum_probs=37.6
Q ss_pred CCeEEEecCCchHHHHHHHH---HCCCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCCC------CCcccEEEe
Q 034578 24 IRSMVDVGGGTGTVLAEIVK---SYPHIKGINFDL-QHVIATAPTHEGVSHVGGDMFDA------IPNADAVFM 87 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~---~~p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~~------~p~~D~i~l 87 (90)
..+++=+|+ |.++..+++ +....+++++|. ++-.+..+ ...+.++..|+.+. +..+|+++.
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~d~vi~ 75 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-RMGVATKQVDAKDEAGLAKALGGFDAVIS 75 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-TTTCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hCCCcEEEecCCCHHHHHHHHcCCCEEEE
Confidence 357888887 444444433 333367899998 65554433 34567788888651 234788775
No 331
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=85.90 E-value=2.5 Score=28.07 Aligned_cols=43 Identities=14% Similarity=0.073 Sum_probs=33.1
Q ss_pred CCCCCeEEEecCCc-hHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 21 FNNIRSMVDVGGGT-GTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 21 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
..+..+||-+|+|. |.++..+++.. ++++++++. ++-.+.+++
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~ 218 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAM-GAEVSVFARNEHKKQDALS 218 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSTTHHHHHH
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHh
Confidence 55678899999875 88999999986 569999996 655555544
No 332
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=85.68 E-value=1.3 Score=28.87 Aligned_cols=51 Identities=18% Similarity=0.256 Sum_probs=34.5
Q ss_pred eEEEecCCchHHHHHHHHHC---CCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCC
Q 034578 26 SMVDVGGGTGTVLAEIVKSY---PHIKGINFDL-QHVIATAPTHEGVSHVGGDMFD 77 (90)
Q Consensus 26 ~vlDvG~G~G~~~~~l~~~~---p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~ 77 (90)
+||=. ||+|.++..++++. ++.++++++. +.-.+......+++++.+|+.+
T Consensus 2 ~vlVt-GatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~ 56 (345)
T 2bll_A 2 RVLIL-GVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISI 56 (345)
T ss_dssp EEEEE-TCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTT
T ss_pred eEEEE-CCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccC
Confidence 34544 45788887777654 4678999997 4433333335689999999976
No 333
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=85.67 E-value=1.3 Score=27.21 Aligned_cols=58 Identities=22% Similarity=0.169 Sum_probs=39.4
Q ss_pred eEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCC-C------CCcccEEEe
Q 034578 26 SMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATAPTHEGVSHVGGDMFD-A------IPNADAVFM 87 (90)
Q Consensus 26 ~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~-~------~p~~D~i~l 87 (90)
+|+=.| |+|.++..++++. .+.++++++. +... .+..+++++.+|+.+ + +.+.|+++.
T Consensus 2 ~ilItG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~ 69 (219)
T 3dqp_A 2 KIFIVG-STGRVGKSLLKSLSTTDYQIYAGARKVEQV---PQYNNVKAVHFDVDWTPEEMAKQLHGMDAIIN 69 (219)
T ss_dssp EEEEES-TTSHHHHHHHHHHTTSSCEEEEEESSGGGS---CCCTTEEEEECCTTSCHHHHHTTTTTCSEEEE
T ss_pred eEEEEC-CCCHHHHHHHHHHHHCCCEEEEEECCccch---hhcCCceEEEecccCCHHHHHHHHcCCCEEEE
Confidence 355444 5788888888775 3468999997 5422 223789999999987 3 233688764
No 334
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=85.63 E-value=2.8 Score=28.33 Aligned_cols=44 Identities=20% Similarity=0.114 Sum_probs=34.2
Q ss_pred CCCCCeEEEecCCc-hHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 21 FNNIRSMVDVGGGT-GTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 21 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
+.+..+||-+|+|. |.++..+++..-..+++++|. ++-++.+++
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA 228 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH
Confidence 55668899999875 889999999874447899997 776666654
No 335
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=85.31 E-value=1.8 Score=24.97 Aligned_cols=62 Identities=19% Similarity=0.269 Sum_probs=40.8
Q ss_pred CCeEEEecCCc-hHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCCC-------CCcccEEEe
Q 034578 24 IRSMVDVGGGT-GTVLAEIVKSYPHIKGINFDL-QHVIATAPTHEGVSHVGGDMFDA-------IPNADAVFM 87 (90)
Q Consensus 24 ~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~~-------~p~~D~i~l 87 (90)
..+++=+|+|. |......+++ .+.+++++|. |+.++.+++ ..+.++.+|..++ +..+|+++.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~-~g~~v~vid~~~~~~~~~~~-~g~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLA-SDIPLVVIETSRTRVDELRE-RGVRAVLGNAANEEIMQLAHLECAKWLIL 77 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH-TTCCEEEEESCHHHHHHHHH-TTCEEEESCTTSHHHHHHTTGGGCSEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHH-CCCCEEEEECCHHHHHHHHH-cCCCEEECCCCCHHHHHhcCcccCCEEEE
Confidence 35788899874 4433333333 3568999998 877776554 3567788988762 234788775
No 336
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=85.08 E-value=1.9 Score=26.30 Aligned_cols=59 Identities=17% Similarity=0.099 Sum_probs=37.6
Q ss_pred EEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCCC----CCcccEEEe
Q 034578 27 MVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATAPTHEGVSHVGGDMFDA----IPNADAVFM 87 (90)
Q Consensus 27 vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~~----~p~~D~i~l 87 (90)
||=.| |+|.++..++++. .+.++++++. +.-.+.. ...+++++.+|+.++ +...|+++.
T Consensus 3 ilVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~d~vi~ 68 (224)
T 3h2s_A 3 IAVLG-ATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR-LGATVATLVKEPLVLTEADLDSVDAVVD 68 (224)
T ss_dssp EEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-TCTTSEEEECCGGGCCHHHHTTCSEEEE
T ss_pred EEEEc-CCCHHHHHHHHHHHHCCCEEEEEEecccccccc-cCCCceEEecccccccHhhcccCCEEEE
Confidence 55455 4677666666553 3578999997 5544432 235789999999763 234677764
No 337
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=84.95 E-value=3.6 Score=23.06 Aligned_cols=61 Identities=16% Similarity=0.195 Sum_probs=36.2
Q ss_pred CeEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCCC-------CCcccEEEee
Q 034578 25 RSMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATAPTHEGVSHVGGDMFDA-------IPNADAVFMK 88 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~~-------~p~~D~i~l~ 88 (90)
.+++=+|+ |.++..+++.. .+.+++++|. ++..+..++. ...++.+|..++ +..+|+++..
T Consensus 7 ~~v~I~G~--G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~-~~~~~~~d~~~~~~l~~~~~~~~d~vi~~ 77 (144)
T 2hmt_A 7 KQFAVIGL--GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASY-ATHAVIANATEENELLSLGIRNFEYVIVA 77 (144)
T ss_dssp CSEEEECC--SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTT-CSEEEECCTTCHHHHHTTTGGGCSEEEEC
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh-CCEEEEeCCCCHHHHHhcCCCCCCEEEEC
Confidence 46888886 44444444332 2457888897 7666655543 245667776541 2247887753
No 338
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=84.87 E-value=2.9 Score=27.89 Aligned_cols=44 Identities=18% Similarity=0.192 Sum_probs=33.7
Q ss_pred CCCCCeEEEecCCc-hHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 21 FNNIRSMVDVGGGT-GTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 21 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
..+..+||-+|+|. |.++..+++.....+++++|. ++-.+.+++
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 214 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE 214 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 45668899999885 889999999874338999997 666665554
No 339
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=84.83 E-value=3.6 Score=27.14 Aligned_cols=43 Identities=16% Similarity=0.159 Sum_probs=34.3
Q ss_pred CCCCCeEEEecCCc-hHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 21 FNNIRSMVDVGGGT-GTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 21 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
..+..+||-.|+|. |.++..+++.. +++++++|. ++-.+.+++
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~ 208 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAM-GLRVAAVDIDDAKLNLARR 208 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHH
Confidence 55678899899875 99999999987 569999997 776666654
No 340
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=84.36 E-value=1.1 Score=31.45 Aligned_cols=60 Identities=13% Similarity=0.155 Sum_probs=41.9
Q ss_pred eEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCCC-------CCcccEEEe
Q 034578 26 SMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATAPTHEGVSHVGGDMFDA-------IPNADAVFM 87 (90)
Q Consensus 26 ~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~~-------~p~~D~i~l 87 (90)
+|+=+|| |.++..+++.. .+-.++.+|. |+.++...+.-.+..+.||..++ ...+|+++.
T Consensus 5 ~iiI~G~--G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia 74 (461)
T 4g65_A 5 KIIILGA--GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVA 74 (461)
T ss_dssp EEEEECC--SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEE
T ss_pred EEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEE
Confidence 4555555 67777777765 3567999998 88887765544578889998873 334788764
No 341
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=84.01 E-value=2.9 Score=23.39 Aligned_cols=62 Identities=19% Similarity=0.185 Sum_probs=36.7
Q ss_pred CeEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCCC-------CCcccEEEee
Q 034578 25 RSMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATAPTHEGVSHVGGDMFDA-------IPNADAVFMK 88 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~~-------~p~~D~i~l~ 88 (90)
.+++=+|+| .++..+++.. .+.+++++|. ++.++..++...+.++.+|..++ +..+|+++..
T Consensus 5 m~i~IiG~G--~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~ 76 (140)
T 1lss_A 5 MYIIIAGIG--RVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAV 76 (140)
T ss_dssp CEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred CEEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEe
Confidence 467878774 4444444332 2568999998 66555443322456677776541 3348888764
No 342
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=83.23 E-value=3.2 Score=27.48 Aligned_cols=44 Identities=25% Similarity=0.305 Sum_probs=35.3
Q ss_pred CCCCCeEEEecCCc-hHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 21 FNNIRSMVDVGGGT-GTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 21 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
..+..+|+-+|+|. |.++..+++.....+++++|. ++-.+.+++
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~ 214 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE 214 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 45678899999875 889999999876789999997 766666654
No 343
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=82.51 E-value=3.4 Score=27.84 Aligned_cols=43 Identities=14% Similarity=0.108 Sum_probs=32.5
Q ss_pred CCCCCeEEEecCCc-hHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 21 FNNIRSMVDVGGGT-GTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 21 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
..+..+||-+|+|. |.++..+++.. ++++++++. ++-.+.+++
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~ 236 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKA 236 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH
Confidence 55678899999885 88999999876 568899996 655555443
No 344
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=81.96 E-value=2.6 Score=27.89 Aligned_cols=42 Identities=14% Similarity=0.078 Sum_probs=32.4
Q ss_pred CCCeEEEecCCc-hHHHHHHHHHC-CCCeEEEeeh-HHHHHhCCC
Q 034578 23 NIRSMVDVGGGT-GTVLAEIVKSY-PHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 23 ~~~~vlDvG~G~-G~~~~~l~~~~-p~~~~~~~D~-p~~~~~a~~ 64 (90)
+..+||-+|+|. |.++..+++.. |+++++++|. ++-.+.+++
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~ 214 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE 214 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH
Confidence 668999999874 88888888875 5789999996 665555543
No 345
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=81.54 E-value=3.8 Score=25.94 Aligned_cols=60 Identities=7% Similarity=0.087 Sum_probs=40.4
Q ss_pred CeEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCC-CCCcccEEEe
Q 034578 25 RSMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATAPTHEGVSHVGGDMFD-AIPNADAVFM 87 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~-~~p~~D~i~l 87 (90)
.+||=.| + |.++..++++. .+.++++++. +.-.+... ..+++++.+|+.+ .+.++|+|+-
T Consensus 6 ~~ilVtG-a-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~~~~~~d~vi~ 69 (286)
T 3ius_A 6 GTLLSFG-H-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR-ASGAEPLLWPGEEPSLDGVTHLLI 69 (286)
T ss_dssp CEEEEET-C-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH-HTTEEEEESSSSCCCCTTCCEEEE
T ss_pred CcEEEEC-C-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh-hCCCeEEEecccccccCCCCEEEE
Confidence 5788898 4 88888887764 3568899987 43222111 2568999999876 3344787764
No 346
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=81.54 E-value=3.5 Score=28.59 Aligned_cols=62 Identities=19% Similarity=0.252 Sum_probs=41.0
Q ss_pred CeEEEecCCc-hHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCCC-------CCcccEEEee
Q 034578 25 RSMVDVGGGT-GTVLAEIVKSYPHIKGINFDL-QHVIATAPTHEGVSHVGGDMFDA-------IPNADAVFMK 88 (90)
Q Consensus 25 ~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~~-------~p~~D~i~l~ 88 (90)
.+|+=+|+|. |......+++ .+..++++|. |+.++.+++. .+.++.||..++ +..+|+++..
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~-~g~~vvvId~d~~~v~~~~~~-g~~vi~GDat~~~~L~~agi~~A~~viv~ 75 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLS-SGVKMVVLDHDPDHIETLRKF-GMKVFYGDATRMDLLESAGAAKAEVLINA 75 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-TTCCEEEEECCHHHHHHHHHT-TCCCEESCTTCHHHHHHTTTTTCSEEEEC
T ss_pred CeEEEECCCHHHHHHHHHHHH-CCCCEEEEECCHHHHHHHHhC-CCeEEEcCCCCHHHHHhcCCCccCEEEEC
Confidence 4688888863 4444444443 3578999998 8888776643 366788998772 3348887753
No 347
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=81.48 E-value=2.3 Score=29.12 Aligned_cols=31 Identities=23% Similarity=0.392 Sum_probs=25.2
Q ss_pred CeEEEecCCchHHH--HHHHHHCCCCeEEEeeh
Q 034578 25 RSMVDVGGGTGTVL--AEIVKSYPHIKGINFDL 55 (90)
Q Consensus 25 ~~vlDvG~G~G~~~--~~l~~~~p~~~~~~~D~ 55 (90)
++|+=||+|.+.+. ..|.+..|+.+++.+|.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~ 35 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISD 35 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECS
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcC
Confidence 47999999998754 45777789999999994
No 348
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=80.81 E-value=2.7 Score=25.39 Aligned_cols=43 Identities=9% Similarity=-0.025 Sum_probs=30.9
Q ss_pred CCCCCeEEEecC--CchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 21 FNNIRSMVDVGG--GTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 21 ~~~~~~vlDvG~--G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
..+..+++..|+ |.|.....+++.. +.+++++|. ++..+.+++
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~ 81 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMI-GARIYTTAGSDAKREMLSR 81 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHT
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH
Confidence 556689999994 6677777777764 468999998 666555544
No 349
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=80.50 E-value=2.2 Score=25.80 Aligned_cols=59 Identities=15% Similarity=0.197 Sum_probs=37.6
Q ss_pred eEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCCC----CCcccEEEe
Q 034578 26 SMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATAPTHEGVSHVGGDMFDA----IPNADAVFM 87 (90)
Q Consensus 26 ~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~~----~p~~D~i~l 87 (90)
+||=.| |+|.++..++++. .+.++++++. +.-.+... ++++++.+|+.++ +...|+++.
T Consensus 2 kvlVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~d~vi~ 67 (221)
T 3ew7_A 2 KIGIIG-ATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--KDINILQKDIFDLTLSDLSDQNVVVD 67 (221)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--SSSEEEECCGGGCCHHHHTTCSEEEE
T ss_pred eEEEEc-CCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--CCCeEEeccccChhhhhhcCCCEEEE
Confidence 355455 4666666666553 3578999997 55444333 6789999999763 233677764
No 350
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=80.37 E-value=4.5 Score=26.81 Aligned_cols=43 Identities=23% Similarity=0.431 Sum_probs=32.7
Q ss_pred CCCCCeEEEecCC--chHHHHHHHHHCCCCeEEEeeh-HHHHHhCC
Q 034578 21 FNNIRSMVDVGGG--TGTVLAEIVKSYPHIKGINFDL-QHVIATAP 63 (90)
Q Consensus 21 ~~~~~~vlDvG~G--~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~ 63 (90)
..+..++|-.|+| .|..+..+++..+++++++.|. ++-.+.++
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~ 213 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK 213 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 5567899999987 6678888888764679999997 66655554
No 351
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=79.61 E-value=2.2 Score=27.96 Aligned_cols=31 Identities=26% Similarity=0.388 Sum_probs=25.5
Q ss_pred CeEEEecCCchHHHHH--HHHHCCCCeEEEeeh
Q 034578 25 RSMVDVGGGTGTVLAE--IVKSYPHIKGINFDL 55 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~--l~~~~p~~~~~~~D~ 55 (90)
.-|+=||+|++-++.+ ++++.++.+++.+|.
T Consensus 66 ~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk 98 (326)
T 3fpz_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIES 98 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 3599999999888766 556678999999995
No 352
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=78.96 E-value=10 Score=24.31 Aligned_cols=52 Identities=25% Similarity=0.332 Sum_probs=33.8
Q ss_pred CeEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHH-hCCCCCCeeEEEecCCC
Q 034578 25 RSMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIA-TAPTHEGVSHVGGDMFD 77 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~-~a~~~~rv~~~~~d~~~ 77 (90)
+++|=-|++.| ++.++++++ .++++++.|+ ++..+ .+++..++.++.+|+.+
T Consensus 3 K~vlVTGas~G-IG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 58 (247)
T 3ged_A 3 RGVIVTGGGHG-IGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVAD 58 (247)
T ss_dssp CEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTS
T ss_pred CEEEEecCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCC
Confidence 45665666555 444444443 4688999998 54443 44556788888999876
No 353
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=78.42 E-value=3.3 Score=25.54 Aligned_cols=62 Identities=15% Similarity=0.153 Sum_probs=38.4
Q ss_pred CCeEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhCCCCCCe-eEEEecCCCC----CCcccEEEe
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATAPTHEGV-SHVGGDMFDA----IPNADAVFM 87 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a~~~~rv-~~~~~d~~~~----~p~~D~i~l 87 (90)
..+||=.| |+|.++..++++. .+.++++++. +.-.+... ..++ +++.+|+.+. +...|+++.
T Consensus 21 ~~~ilVtG-atG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~D~vi~ 90 (236)
T 3e8x_A 21 GMRVLVVG-ANGKVARYLLSELKNKGHEPVAMVRNEEQGPELR-ERGASDIVVANLEEDFSHAFASIDAVVF 90 (236)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HTTCSEEEECCTTSCCGGGGTTCSEEEE
T ss_pred CCeEEEEC-CCChHHHHHHHHHHhCCCeEEEEECChHHHHHHH-hCCCceEEEcccHHHHHHHHcCCCEEEE
Confidence 35677666 4676666666553 3578999997 54333211 1367 8999998742 233688764
No 354
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=78.37 E-value=3.6 Score=27.33 Aligned_cols=44 Identities=11% Similarity=0.024 Sum_probs=33.0
Q ss_pred CCCCCeEEEecCCc-hHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 21 FNNIRSMVDVGGGT-GTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 21 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
..+..+||-+|+|. |.++..+++..-..+++++|. ++-.+.+++
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~ 209 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALE 209 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH
Confidence 55678899999875 889999998764337999998 665665554
No 355
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=78.05 E-value=3 Score=28.02 Aligned_cols=45 Identities=22% Similarity=0.180 Sum_probs=34.6
Q ss_pred CCCCCeEEEecCC-chHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCC
Q 034578 21 FNNIRSMVDVGGG-TGTVLAEIVKSYPHIKGINFDL-QHVIATAPTH 65 (90)
Q Consensus 21 ~~~~~~vlDvG~G-~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~ 65 (90)
..+..+||-+|+| .|.++..+++..-..+++++|. ++-++.+++.
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~l 237 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKF 237 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc
Confidence 5566789999987 4889999998864448999996 7777776653
No 356
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=78.04 E-value=7.1 Score=25.45 Aligned_cols=63 Identities=14% Similarity=0.186 Sum_probs=39.9
Q ss_pred CCeEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HH----HHHhCCCCCCeeEEEecCCCC-CCcccEEEe
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QH----VIATAPTHEGVSHVGGDMFDA-IPNADAVFM 87 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~----~~~~a~~~~rv~~~~~d~~~~-~p~~D~i~l 87 (90)
..+||=.|+ +|.++..++++. .+.++++++. +. .++......++.++.+|+.++ +...|+|+-
T Consensus 27 ~~~vlVtGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vih 97 (343)
T 2b69_A 27 RKRILITGG-AGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYH 97 (343)
T ss_dssp CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCCCCSEEEE
T ss_pred CCEEEEEcC-ccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChhhcCCCEEEE
Confidence 456776664 787777776654 3568888885 21 111111235789999999874 445788764
No 357
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=77.60 E-value=6.9 Score=25.93 Aligned_cols=43 Identities=16% Similarity=0.146 Sum_probs=32.8
Q ss_pred CCCCCeEEEecCCc-hHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 21 FNNIRSMVDVGGGT-GTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 21 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
..+..+||-+|+|. |.++..+++.. ++++++.|. ++-.+.+++
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~ 210 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKN 210 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHH
Confidence 45668899999875 88899999876 567899997 666665554
No 358
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=77.38 E-value=5.2 Score=26.77 Aligned_cols=44 Identities=18% Similarity=0.068 Sum_probs=32.5
Q ss_pred CCCCCeEEEecCCc-hHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 21 FNNIRSMVDVGGGT-GTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 21 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
.....+||-+|+|. |.++..+++..-..+++++|. ++-.+.+++
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~ 235 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV 235 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 45668899999874 889999999874337999986 665555543
No 359
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=76.84 E-value=2.2 Score=28.78 Aligned_cols=53 Identities=21% Similarity=0.213 Sum_probs=37.8
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCC----CeEEEeeh-HHHHHhCCCCCCeeEEEecCCC
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPH----IKGINFDL-QHVIATAPTHEGVSHVGGDMFD 77 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~----~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~ 77 (90)
+...|+=+|||.|.....|.+.+|+ ++.+.+|. |... ..+...++.++.. +++
T Consensus 60 ~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDPap~~~-~l~~~~NV~li~~-fvd 117 (307)
T 3mag_A 60 DGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHHDP-ILNGLRDVTLVTR-FVD 117 (307)
T ss_dssp TTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEESSCCCG-GGTTCTTEEEEEC-CCC
T ss_pred CCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcCCcchh-hhcCCCcEEEEec-cCC
Confidence 3469999999999999999988876 69999995 3321 1223466777655 443
No 360
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=76.36 E-value=5.8 Score=26.55 Aligned_cols=44 Identities=18% Similarity=0.120 Sum_probs=32.4
Q ss_pred CCCCCeEEEecCCc-hHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 21 FNNIRSMVDVGGGT-GTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 21 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
..+..+||-+|+|. |.++..+++..-..+++++|. ++-.+.+++
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~ 234 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE 234 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 55668899999875 889999999874337999986 665555543
No 361
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=75.88 E-value=7.4 Score=27.28 Aligned_cols=76 Identities=20% Similarity=0.221 Sum_probs=45.8
Q ss_pred HHHHHhhcccCCCCCCCeEEEecCCc-hHHHHHHHHHCCCCeEEEeeh-H-HHHHhCCCCCCeeEEEecCCCC-------
Q 034578 9 MKAFVSHYKVDGFNNIRSMVDVGGGT-GTVLAEIVKSYPHIKGINFDL-Q-HVIATAPTHEGVSHVGGDMFDA------- 78 (90)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-p-~~~~~a~~~~rv~~~~~d~~~~------- 78 (90)
.+.+.+.+.. .....++++=+|||. |..+...++. ..++..+|. + .+-..+.+-++..++.||..++
T Consensus 221 i~~~~~~~g~-~~~~~~~v~I~GgG~ig~~lA~~L~~--~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~ee~ 297 (461)
T 4g65_A 221 IRSVMSELQR-LEKPYRRIMIVGGGNIGASLAKRLEQ--TYSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLTEEN 297 (461)
T ss_dssp HHHHHHHTTG-GGSCCCEEEEECCSHHHHHHHHHHTT--TSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHHHTT
T ss_pred HHHHHHhhcc-ccccccEEEEEcchHHHHHHHHHhhh--cCceEEEecCHHHHHHHHHHCCCceEEeccccchhhHhhcC
Confidence 3444444442 023457899999884 4444444433 456777776 4 4444555567889999999872
Q ss_pred CCcccEEEe
Q 034578 79 IPNADAVFM 87 (90)
Q Consensus 79 ~p~~D~i~l 87 (90)
+..+|+++.
T Consensus 298 i~~~D~~ia 306 (461)
T 4g65_A 298 IDQVDVFIA 306 (461)
T ss_dssp GGGCSEEEE
T ss_pred chhhcEEEE
Confidence 233788764
No 362
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=75.47 E-value=6.3 Score=26.38 Aligned_cols=44 Identities=16% Similarity=0.027 Sum_probs=32.3
Q ss_pred CCCCCeEEEecCCc-hHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 21 FNNIRSMVDVGGGT-GTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 21 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
.....+||-+|+|. |.++..+++..-..+++++|. ++-.+.+++
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 238 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA 238 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 45668899999874 889999999874337999986 655555543
No 363
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=75.42 E-value=8.1 Score=27.02 Aligned_cols=63 Identities=14% Similarity=0.078 Sum_probs=39.3
Q ss_pred CCeEEEecCCchHH-HHHHHHHCCCCeEEEeeh---HHHHHhCCCCCCeeEEEecCCC-CCCcccEEEee
Q 034578 24 IRSMVDVGGGTGTV-LAEIVKSYPHIKGINFDL---QHVIATAPTHEGVSHVGGDMFD-AIPNADAVFMK 88 (90)
Q Consensus 24 ~~~vlDvG~G~G~~-~~~l~~~~p~~~~~~~D~---p~~~~~a~~~~rv~~~~~d~~~-~~p~~D~i~l~ 88 (90)
..++|=+|+|.=.. ...++.+ -+++++.+|. ++..+. .+..+++++.+.+.. .+..+|+++.+
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~-~ga~V~vi~~~~~~~~~~l-~~~~~i~~~~~~~~~~~l~~~~lVi~a 79 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLE-AGARLTVNALTFIPQFTVW-ANEGMLTLVEGPFDETLLDSCWLAIAA 79 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-TTBEEEEEESSCCHHHHHH-HTTTSCEEEESSCCGGGGTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHh-CcCEEEEEcCCCCHHHHHH-HhcCCEEEEECCCCccccCCccEEEEc
Confidence 47899999995433 2333333 3678888884 333222 223578898888765 45568888754
No 364
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=75.24 E-value=2.9 Score=25.02 Aligned_cols=30 Identities=17% Similarity=0.113 Sum_probs=23.8
Q ss_pred eEEEecCCchHHHHHHHHHCCCCeEEEeeh
Q 034578 26 SMVDVGGGTGTVLAEIVKSYPHIKGINFDL 55 (90)
Q Consensus 26 ~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~ 55 (90)
.|+=||+|..-++.+...+--+.+++++|.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEEC
Confidence 388999998877776665556889999995
No 365
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=75.20 E-value=7.4 Score=23.12 Aligned_cols=62 Identities=15% Similarity=0.252 Sum_probs=36.2
Q ss_pred CeEEEecCCc-hHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCCC--------CCcccEEEe
Q 034578 25 RSMVDVGGGT-GTVLAEIVKSYPHIKGINFDL-QHVIATAPTHEGVSHVGGDMFDA--------IPNADAVFM 87 (90)
Q Consensus 25 ~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~~--------~p~~D~i~l 87 (90)
.+++=+|+|. |......+.+..+.+++++|. |+.++.+++. .+..+.+|..++ +..+|+++.
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~-g~~~~~gd~~~~~~l~~~~~~~~ad~vi~ 111 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSE-GRNVISGDATDPDFWERILDTGHVKLVLL 111 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHT-TCCEEECCTTCHHHHHTBCSCCCCCEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHC-CCCEEEcCCCCHHHHHhccCCCCCCEEEE
Confidence 4788888762 333322222221457899998 7766655433 355667776541 334788876
No 366
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=75.00 E-value=5.7 Score=25.36 Aligned_cols=63 Identities=17% Similarity=0.142 Sum_probs=33.5
Q ss_pred eEEEecCCc-hH-HHHHHHHHCCCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCCCCC-cccEEEee
Q 034578 26 SMVDVGGGT-GT-VLAEIVKSYPHIKGINFDL-QHVIATAPTHEGVSHVGGDMFDAIP-NADAVFMK 88 (90)
Q Consensus 26 ~vlDvG~G~-G~-~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~~~p-~~D~i~l~ 88 (90)
+|.=||+|. |. ++..+.+.....+++++|. ++.++.+++.+-......|..+.+. .+|+|++.
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVila 69 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLS 69 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEEC
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEc
Confidence 577788763 33 4444444322237899998 7666554432211111233333345 68888864
No 367
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=74.90 E-value=2.1 Score=27.25 Aligned_cols=59 Identities=17% Similarity=0.036 Sum_probs=37.1
Q ss_pred EEEecCCchHHHHHHHHHC---CCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCCC------CCcccEEEe
Q 034578 27 MVDVGGGTGTVLAEIVKSY---PHIKGINFDL-QHVIATAPTHEGVSHVGGDMFDA------IPNADAVFM 87 (90)
Q Consensus 27 vlDvG~G~G~~~~~l~~~~---p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~~------~p~~D~i~l 87 (90)
||=.| |+|.++..++++. +..++++++. +.-.+.. ...+++++.+|+.++ +..+|+++.
T Consensus 3 ilVtG-atG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~ 71 (289)
T 3e48_A 3 IMLTG-ATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-WRGKVSVRQLDYFNQESMVEAFKGMDTVVF 71 (289)
T ss_dssp EEEET-TTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-GBTTBEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred EEEEc-CCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-hhCCCEEEEcCCCCHHHHHHHHhCCCEEEE
Confidence 44444 5677776666553 4678888887 5422111 236799999999872 334688764
No 368
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=74.66 E-value=10 Score=24.91 Aligned_cols=44 Identities=23% Similarity=0.183 Sum_probs=33.2
Q ss_pred CCCCCeEEEecCCc-hHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 21 FNNIRSMVDVGGGT-GTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 21 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
..+..+||=+|+|+ |.++..++++.-..+++++|. ++-.+.+++
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~ 206 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK 206 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh
Confidence 45567899999985 567777788777899999997 665555544
No 369
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=74.59 E-value=4.9 Score=26.87 Aligned_cols=44 Identities=14% Similarity=-0.025 Sum_probs=32.3
Q ss_pred CCCCCeEEEecCCc-hHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 21 FNNIRSMVDVGGGT-GTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 21 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
..+..+||-+|+|. |.++..+++..-..+++++|. ++-.+.+++
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 234 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE 234 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH
Confidence 55668899999874 888999998864337899986 665555544
No 370
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=74.49 E-value=8.5 Score=22.20 Aligned_cols=62 Identities=11% Similarity=0.103 Sum_probs=36.5
Q ss_pred CeEEEecCCchHHHHHHHHHC--CCCeEEEeeh-H-HHHHhCCC--CCCeeEEEecCCCC-------CCcccEEEee
Q 034578 25 RSMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-Q-HVIATAPT--HEGVSHVGGDMFDA-------IPNADAVFMK 88 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p-~~~~~a~~--~~rv~~~~~d~~~~-------~p~~D~i~l~ 88 (90)
.+++=+|+ |.++..+++.. .+.+++++|. + +..+..++ ...+.++.||..++ +..+|+++..
T Consensus 4 ~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (153)
T 1id1_A 4 DHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILAL 78 (153)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEEC
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEe
Confidence 46777776 55555555442 2567888887 4 32222111 23578889998752 3447887753
No 371
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=74.28 E-value=9.1 Score=25.67 Aligned_cols=44 Identities=14% Similarity=0.092 Sum_probs=33.5
Q ss_pred CCCCCeEEEecCCc-hHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 21 FNNIRSMVDVGGGT-GTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 21 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
..+..+||-.|+|. |.++..+++..-..+++++|. ++-.+.+++
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 225 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEE 225 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 55668898899875 889999999875448999987 666665554
No 372
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=73.32 E-value=8.5 Score=25.68 Aligned_cols=43 Identities=16% Similarity=0.154 Sum_probs=33.6
Q ss_pred CCCCCeEEEec--CCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 21 FNNIRSMVDVG--GGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 21 ~~~~~~vlDvG--~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
.....+||-.| +|.|..+..+++.. ++++++.+. ++-.+.+++
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~ 206 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKSAFLKS 206 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHH
Confidence 45678999999 67899999999987 568999997 665555543
No 373
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=73.04 E-value=5.7 Score=26.53 Aligned_cols=44 Identities=18% Similarity=0.089 Sum_probs=31.9
Q ss_pred CCCCCeEEEecCCc-hHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 21 FNNIRSMVDVGGGT-GTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 21 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
.....+||-+|+|. |.++..+++..-..+++++|. ++-.+.+++
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~ 233 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE 233 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 45667899999874 888999998864337899986 655555443
No 374
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=72.91 E-value=9.7 Score=25.34 Aligned_cols=44 Identities=18% Similarity=0.226 Sum_probs=33.3
Q ss_pred CCCCCeEEEecCC-chHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 21 FNNIRSMVDVGGG-TGTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 21 ~~~~~~vlDvG~G-~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
..+..+||-+|+| .|.++..+++..++++++++|. ++-.+.+++
T Consensus 184 ~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~ 229 (359)
T 1h2b_A 184 LYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER 229 (359)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 5566789988865 5778889998875679999997 666665554
No 375
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=72.48 E-value=5.2 Score=28.22 Aligned_cols=32 Identities=9% Similarity=-0.036 Sum_probs=24.8
Q ss_pred CCeEEEecCCchHHHHHHHHHCCCCeEEEeeh
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL 55 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~ 55 (90)
..+|+=||+|.|.+..+-.-+..+.+++.+|.
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~ 73 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISP 73 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEES
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECC
Confidence 35899999999987665544456789999994
No 376
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=72.39 E-value=6.5 Score=25.61 Aligned_cols=63 Identities=16% Similarity=0.213 Sum_probs=39.1
Q ss_pred CCeEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HH----HHHhCCCC------CCeeEEEecCCCC------CCcccE
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QH----VIATAPTH------EGVSHVGGDMFDA------IPNADA 84 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~----~~~~a~~~------~rv~~~~~d~~~~------~p~~D~ 84 (90)
..+||=.| |+|.++..++++. .+.++++++. +. .++..+.. ++++++.+|+.++ +..+|+
T Consensus 25 ~~~vlVtG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 103 (351)
T 3ruf_A 25 PKTWLITG-VAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDH 103 (351)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred CCeEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCCE
Confidence 46788666 4777777776654 3578888885 21 12111111 6899999999772 223687
Q ss_pred EEe
Q 034578 85 VFM 87 (90)
Q Consensus 85 i~l 87 (90)
|+-
T Consensus 104 Vih 106 (351)
T 3ruf_A 104 VLH 106 (351)
T ss_dssp EEE
T ss_pred EEE
Confidence 763
No 377
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=72.39 E-value=9 Score=25.42 Aligned_cols=43 Identities=14% Similarity=0.068 Sum_probs=31.2
Q ss_pred CCCCCeEEEecCCc-hHHHHHHHHHCCCCeEEEeeh-HHHHHhCC
Q 034578 21 FNNIRSMVDVGGGT-GTVLAEIVKSYPHIKGINFDL-QHVIATAP 63 (90)
Q Consensus 21 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~ 63 (90)
..+..+||-+|+|. |.++..+++..-.-++++.|. ++-.+.++
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~ 221 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAK 221 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 55667888899875 889999999864334888886 65555444
No 378
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=72.18 E-value=3.5 Score=25.12 Aligned_cols=60 Identities=18% Similarity=0.176 Sum_probs=39.2
Q ss_pred CeEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCCC------CCcccEEEe
Q 034578 25 RSMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATAPTHEGVSHVGGDMFDA------IPNADAVFM 87 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~~------~p~~D~i~l 87 (90)
.+||=.| |+|.++..++++. .+.++++++. +.-.+. ...+++++.+|+.++ +.++|+++.
T Consensus 5 ~~ilItG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 73 (227)
T 3dhn_A 5 KKIVLIG-ASGFVGSALLNEALNRGFEVTAVVRHPEKIKI--ENEHLKVKKADVSSLDEVCEVCKGADAVIS 73 (227)
T ss_dssp CEEEEET-CCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC--CCTTEEEECCCTTCHHHHHHHHTTCSEEEE
T ss_pred CEEEEEc-CCchHHHHHHHHHHHCCCEEEEEEcCcccchh--ccCceEEEEecCCCHHHHHHHhcCCCEEEE
Confidence 4677565 4777777777664 3578999997 443221 137899999999872 223687764
No 379
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=72.10 E-value=16 Score=24.07 Aligned_cols=42 Identities=21% Similarity=0.156 Sum_probs=32.7
Q ss_pred CCCeEEEecCC-chHHHHHHHHHCCCC-eEEEeeh-HHHHHhCCCC
Q 034578 23 NIRSMVDVGGG-TGTVLAEIVKSYPHI-KGINFDL-QHVIATAPTH 65 (90)
Q Consensus 23 ~~~~vlDvG~G-~G~~~~~l~~~~p~~-~~~~~D~-p~~~~~a~~~ 65 (90)
+..+||-+|+| .|.++..+++.. ++ ++++++. ++-.+.+++.
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~l 208 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRAS-GAGPILVSDPNPYRLAFARPY 208 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHGGGTTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh
Confidence 66889999975 488899999886 45 8999997 7767766653
No 380
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=72.03 E-value=10 Score=25.32 Aligned_cols=43 Identities=16% Similarity=0.048 Sum_probs=33.2
Q ss_pred CCCCCeEEEecCCc-hHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 21 FNNIRSMVDVGGGT-GTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 21 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
.....+||-+|+|. |.++..+++.. +++++++|. ++-.+.+++
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~ 231 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKAT-GAEVIVTSSSREKLDRAFA 231 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEecCchhHHHHHH
Confidence 55678999999875 88899999876 569999997 666665554
No 381
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=71.77 E-value=4.8 Score=24.54 Aligned_cols=62 Identities=18% Similarity=0.336 Sum_probs=38.7
Q ss_pred CeEEEecCCchHHHHHHHHHC---CCCeEEEeeh-HH-HHHhCC-CCCCeeEEEecCCCC--C----CcccEEEe
Q 034578 25 RSMVDVGGGTGTVLAEIVKSY---PHIKGINFDL-QH-VIATAP-THEGVSHVGGDMFDA--I----PNADAVFM 87 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~---p~~~~~~~D~-p~-~~~~a~-~~~rv~~~~~d~~~~--~----p~~D~i~l 87 (90)
++++=.|+ +|.++..+++++ .+.++++++. ++ .++... ...+++++.+|+.++ + ...|+++.
T Consensus 6 k~vlVtGa-sg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~ 79 (221)
T 3r6d_A 6 XYITILGA-AGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFV 79 (221)
T ss_dssp SEEEEEST-TSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred EEEEEEeC-CcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEE
Confidence 34776664 555555555442 4678999998 55 333221 356799999999872 2 23687764
No 382
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=71.15 E-value=1.8 Score=30.86 Aligned_cols=51 Identities=16% Similarity=0.195 Sum_probs=36.2
Q ss_pred CeEEEecCCchHHHHHHHHHCCCCe-EEEeeh-HHHHHhCCC----CCCeeEEEecCCC
Q 034578 25 RSMVDVGGGTGTVLAEIVKSYPHIK-GINFDL-QHVIATAPT----HEGVSHVGGDMFD 77 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~p~~~-~~~~D~-p~~~~~a~~----~~rv~~~~~d~~~ 77 (90)
-+++|+=||.|.+...+.++ +.+ +.++|+ |.+.+.-+. .+...++.+|+.+
T Consensus 89 ~~viDLFaG~GGlslG~~~a--G~~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~ 145 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESI--GGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRD 145 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTT--TEEEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHH
T ss_pred ceEEEecCCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHhcccCCCcceeccchhh
Confidence 57999999999999999876 334 577888 777654332 1345566677654
No 383
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=70.84 E-value=7.2 Score=28.55 Aligned_cols=38 Identities=13% Similarity=0.285 Sum_probs=31.7
Q ss_pred CCCeEEEecCCchHHHHHHHHHCC--------CCeEEEeehHHHHH
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYP--------HIKGINFDLQHVIA 60 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p--------~~~~~~~D~p~~~~ 60 (90)
+...|+-+|||.=...-++...+| ++++.-+|+|++++
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p~v~~ 152 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYSDLLK 152 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECHHHHH
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccHHHHH
Confidence 457899999999999999988755 67888888888765
No 384
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=70.79 E-value=1.7 Score=36.71 Aligned_cols=67 Identities=19% Similarity=0.175 Sum_probs=38.9
Q ss_pred CCeEEEecCCchHHHHHHHHHCC-----CCeEEEeeh-HHHHHhCCCC-C--CeeEEEecCCCC---CCc-ccEEEeecC
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSYP-----HIKGINFDL-QHVIATAPTH-E--GVSHVGGDMFDA---IPN-ADAVFMKVA 90 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~p-----~~~~~~~D~-p~~~~~a~~~-~--rv~~~~~d~~~~---~p~-~D~i~l~~v 90 (90)
..+||+||.|+|.....+.+... ..+.+..|+ +...+.+++. . .++.-.-|..++ .+. ||+|+.+++
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~~v 1320 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCNCA 1320 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEECC
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEccc
Confidence 45899999999987766665543 235777787 6666666653 1 122211122122 223 899998754
No 385
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=70.70 E-value=4.8 Score=26.58 Aligned_cols=30 Identities=17% Similarity=0.080 Sum_probs=23.5
Q ss_pred eEEEecCCchHHHHHHHHHCCCCeEEEeeh
Q 034578 26 SMVDVGGGTGTVLAEIVKSYPHIKGINFDL 55 (90)
Q Consensus 26 ~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~ 55 (90)
+|+=||+|..-++.++.-+.-+.+++++|.
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er 32 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYER 32 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEec
Confidence 689999998877766666556788888884
No 386
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=70.53 E-value=3.1 Score=25.49 Aligned_cols=49 Identities=22% Similarity=0.169 Sum_probs=31.3
Q ss_pred EEEecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCCC--CCeeEEEecC
Q 034578 27 MVDVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPTH--EGVSHVGGDM 75 (90)
Q Consensus 27 vlDvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~~--~rv~~~~~d~ 75 (90)
.-=+.||||.=..-.+.++|++++...--+...+.+++. .++-.+.+.+
T Consensus 64 ~GIliCGTGiG~siaANKv~GIRAAl~~d~~sA~~ar~hNnaNVL~lG~rv 114 (162)
T 2vvp_A 64 LGIVLGGSGNGEQIAANKVPGARCALAWSVQTAALAREHNNAQLIGIGGRM 114 (162)
T ss_dssp EEEEEESSSHHHHHHHHTSTTCCEEECCSHHHHHHHHHTTCCSEEEEEGGG
T ss_pred eEEEEeCCcHHHHHHHhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccc
Confidence 344567888766666777999987655447777777663 4454444443
No 387
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=70.26 E-value=6.9 Score=26.06 Aligned_cols=30 Identities=10% Similarity=0.159 Sum_probs=23.2
Q ss_pred eEEEecCCchHHHHH--HHHHCCCCeEEEeeh
Q 034578 26 SMVDVGGGTGTVLAE--IVKSYPHIKGINFDL 55 (90)
Q Consensus 26 ~vlDvG~G~G~~~~~--l~~~~p~~~~~~~D~ 55 (90)
.|+=||+|.+.++.+ |+++.|+.+++++|.
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~ 33 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEK 33 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECS
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEEC
Confidence 588899998775544 455567999999996
No 388
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=70.10 E-value=10 Score=23.80 Aligned_cols=53 Identities=9% Similarity=0.093 Sum_probs=30.9
Q ss_pred CeEEEecCCchH---HHHHHHHHCCCCeEEEeeh-HHHHHhCCC--CCCeeEEEecCCC
Q 034578 25 RSMVDVGGGTGT---VLAEIVKSYPHIKGINFDL-QHVIATAPT--HEGVSHVGGDMFD 77 (90)
Q Consensus 25 ~~vlDvG~G~G~---~~~~l~~~~p~~~~~~~D~-p~~~~~a~~--~~rv~~~~~d~~~ 77 (90)
+++|=.|++.|. ++..++++..+.+++..+. ++.++...+ ..++.++..|+.+
T Consensus 3 k~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~ 61 (254)
T 3kzv_A 3 KVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITE 61 (254)
T ss_dssp CEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTS
T ss_pred CEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCC
Confidence 345656654442 4444555545678888886 544433222 3568888888876
No 389
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=69.77 E-value=7.1 Score=26.83 Aligned_cols=30 Identities=23% Similarity=0.224 Sum_probs=23.7
Q ss_pred eEEEecCCchHHHH--HHHHHCCCCeEEEeeh
Q 034578 26 SMVDVGGGTGTVLA--EIVKSYPHIKGINFDL 55 (90)
Q Consensus 26 ~vlDvG~G~G~~~~--~l~~~~p~~~~~~~D~ 55 (90)
+|+=||+|++.+.. .+++..++.+++.+|.
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~ 33 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEK 33 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEES
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeC
Confidence 58889999987654 4666778889999984
No 390
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=68.62 E-value=6.2 Score=26.42 Aligned_cols=42 Identities=17% Similarity=0.278 Sum_probs=32.9
Q ss_pred CCCeEEEec--CCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 23 NIRSMVDVG--GGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 23 ~~~~vlDvG--~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
...+||=.| ++.|.++..+++.....++++++. ++-.+.+++
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~ 215 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS 215 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH
Confidence 457899888 457899999999866789999998 766665544
No 391
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=68.61 E-value=1.7 Score=34.31 Aligned_cols=62 Identities=11% Similarity=0.093 Sum_probs=44.5
Q ss_pred CCCeEEEecCCchHHHHHHHHHC-CCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCCC-C---CcccEEEe
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSY-PHIKGINFDL-QHVIATAPTHEGVSHVGGDMFDA-I---PNADAVFM 87 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~~-~---p~~D~i~l 87 (90)
...++||+|.|.=+=. +.-. |...++.+|. |-+...+--+.+-.|++.|++.+ + ..+|++.+
T Consensus 821 ~~~~~lDlGTGPE~Ri---LsLiP~~~pvtm~D~RP~ae~~~~w~~~T~f~~~DyL~~~~~~~~~~D~vt~ 888 (1289)
T 1ej6_A 821 DGDVVLDLGTGPEAKI---LELIPATSPVTCVDIRPTAQPSGCWNVRTTFLELDYLSDGWITGVRGDIVTC 888 (1289)
T ss_dssp TTCCEEEESCCSSCGG---GGTSCTTSCEEEEESSCCCSCSTTBSSCEEEEESCTTSSSCGGGCCCSEEEE
T ss_pred ccceEEEccCCCccee---eeecCCCCceEEecccCchhhhccccccceeeEccccccceeecCCCcEEEE
Confidence 4678999999986533 2334 4678999998 76655444467799999999983 2 34888765
No 392
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=68.47 E-value=16 Score=24.08 Aligned_cols=43 Identities=16% Similarity=0.159 Sum_probs=32.7
Q ss_pred CCCCCeEEEecCC-chHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 21 FNNIRSMVDVGGG-TGTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 21 ~~~~~~vlDvG~G-~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
.....+||-+|+| .|.++..+++.. ++++++++. ++-.+.+++
T Consensus 162 ~~~g~~VlV~GaG~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~ 206 (339)
T 1rjw_A 162 AKPGEWVAIYGIGGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKE 206 (339)
T ss_dssp CCTTCEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH
Confidence 4566889999975 588999999886 469999997 666555543
No 393
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=68.29 E-value=4.1 Score=26.87 Aligned_cols=62 Identities=16% Similarity=0.207 Sum_probs=38.4
Q ss_pred CCeEEEecCCchHHHHHHHHHC----CCCeEEEeeh-HH-------HHHhCC-----CCCCeeEEEecCCCC-------C
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSY----PHIKGINFDL-QH-------VIATAP-----THEGVSHVGGDMFDA-------I 79 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~----p~~~~~~~D~-p~-------~~~~a~-----~~~rv~~~~~d~~~~-------~ 79 (90)
..+||=.| |+|.++..++++. .+.++++++. +. ..+... ...+++++.+|+.++ .
T Consensus 10 ~~~vlVTG-atG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 88 (362)
T 3sxp_A 10 NQTILITG-GAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEK 88 (362)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTT
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhc
Confidence 35677666 5777777766553 6789999996 32 110001 135679999999872 2
Q ss_pred CcccEEE
Q 034578 80 PNADAVF 86 (90)
Q Consensus 80 p~~D~i~ 86 (90)
...|+|+
T Consensus 89 ~~~D~vi 95 (362)
T 3sxp_A 89 LHFDYLF 95 (362)
T ss_dssp SCCSEEE
T ss_pred cCCCEEE
Confidence 2367776
No 394
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=68.14 E-value=3 Score=25.39 Aligned_cols=49 Identities=16% Similarity=0.172 Sum_probs=31.3
Q ss_pred EEEecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCCC--CCeeEEEecC
Q 034578 27 MVDVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPTH--EGVSHVGGDM 75 (90)
Q Consensus 27 vlDvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~~--~rv~~~~~d~ 75 (90)
.-=+.||||.=..-.+.++|++++...--|...+.+++. .++-.+.+.+
T Consensus 72 ~GIliCGTGiG~siaANKv~GIRAAl~~d~~sA~~ar~hNnANVL~lG~rv 122 (155)
T 1o1x_A 72 FGILLCGTGLGMSIAANRYRGIRAALCLFPDMARLARSHNNANILVLPGRL 122 (155)
T ss_dssp EEEEEESSSHHHHHHHTTSTTCCEEECSSHHHHHHHHHTTCCSEEEEETTT
T ss_pred eEEEEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHHcCCCcEEEECCcc
Confidence 334567788766666778999987665447777777763 4454444433
No 395
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=68.10 E-value=12 Score=24.63 Aligned_cols=43 Identities=12% Similarity=0.082 Sum_probs=31.7
Q ss_pred CCCCCeEEEecC--CchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 21 FNNIRSMVDVGG--GTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 21 ~~~~~~vlDvG~--G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
..+..++|-.|+ |.|..+..+++.. +.+++++|. ++-.+.+++
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~V~~~~~~~~~~~~~~~ 212 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAM-GYRVLGIDGGEGKEELFRS 212 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSTTHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC-CCcEEEEcCCHHHHHHHHH
Confidence 556789999998 5788888888875 468999996 555554443
No 396
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=68.05 E-value=7.7 Score=25.81 Aligned_cols=42 Identities=17% Similarity=0.037 Sum_probs=31.0
Q ss_pred CCCCCeEEEecCC-chHHHHHHHHHCCCCeEEEeeh-HHHHHhCC
Q 034578 21 FNNIRSMVDVGGG-TGTVLAEIVKSYPHIKGINFDL-QHVIATAP 63 (90)
Q Consensus 21 ~~~~~~vlDvG~G-~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~ 63 (90)
.....+||-+|+| .|.++..+++.. ++++++++. ++-.+.++
T Consensus 177 ~~~g~~VlV~GaG~vG~~~~qlak~~-Ga~Vi~~~~~~~~~~~~~ 220 (360)
T 1piw_A 177 CGPGKKVGIVGLGGIGSMGTLISKAM-GAETYVISRSSRKREDAM 220 (360)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHH
Confidence 5567899999975 488888998875 568999996 55444443
No 397
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=67.87 E-value=3.6 Score=24.84 Aligned_cols=47 Identities=17% Similarity=0.174 Sum_probs=30.1
Q ss_pred EecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCCC--CCeeEEEecC
Q 034578 29 DVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPTH--EGVSHVGGDM 75 (90)
Q Consensus 29 DvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~~--~rv~~~~~d~ 75 (90)
=+.||||.=..-.+.++|++++...--|...+.+++. .++-.+.+.+
T Consensus 62 IliCGTGiG~siaANKv~GIRAAl~~d~~sA~~ar~hNnaNVl~lG~rv 110 (149)
T 3he8_A 62 IVICGTGLGISIAANKVPGIRAAVCTNSYMARMSREHNDANILALGERV 110 (149)
T ss_dssp EEEESSSHHHHHHHHTSTTCCEEECSSHHHHHHHHHTTCCSEEEEETTT
T ss_pred EEEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccc
Confidence 4567777755666677999987665447777777763 4444444433
No 398
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=67.85 E-value=4.9 Score=26.74 Aligned_cols=24 Identities=21% Similarity=0.404 Sum_probs=14.9
Q ss_pred HHHHhhcccCCCCCCCeEEEecCCch
Q 034578 10 KAFVSHYKVDGFNNIRSMVDVGGGTG 35 (90)
Q Consensus 10 ~~~~~~~~~~~~~~~~~vlDvG~G~G 35 (90)
..+...+++ ......++||||||=
T Consensus 120 ~gv~~~~~~--~~~~~lviDIGGGSt 143 (315)
T 3mdq_A 120 RGVQQAVPM--EDHISLAMDIGGGSV 143 (315)
T ss_dssp HHHHHHSCC--TTCCEEEEEECSSCE
T ss_pred HHHHhcCCC--CCCCEEEEEeCCCce
Confidence 344455552 124568999999863
No 399
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=67.82 E-value=14 Score=23.12 Aligned_cols=52 Identities=13% Similarity=0.098 Sum_probs=33.2
Q ss_pred CCeEEEecC-CchH---HHHHHHHHCCCCeEEEeeh-HHHHHhC----CC--CCCeeEEEecCCC
Q 034578 24 IRSMVDVGG-GTGT---VLAEIVKSYPHIKGINFDL-QHVIATA----PT--HEGVSHVGGDMFD 77 (90)
Q Consensus 24 ~~~vlDvG~-G~G~---~~~~l~~~~p~~~~~~~D~-p~~~~~a----~~--~~rv~~~~~d~~~ 77 (90)
.+++|=.|+ |+|. ++..++++ +.++++++. ++..+.. ++ ..++.++..|+.+
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~ 84 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLE--GADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTS 84 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTC
T ss_pred CCEEEEECCCCCchHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCC
Confidence 467888887 4443 55555554 678888886 4433221 11 3689999999976
No 400
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=67.66 E-value=3.9 Score=25.18 Aligned_cols=46 Identities=17% Similarity=0.133 Sum_probs=29.7
Q ss_pred EecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCCC--CCeeEEEec
Q 034578 29 DVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPTH--EGVSHVGGD 74 (90)
Q Consensus 29 DvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~~--~rv~~~~~d 74 (90)
=+.||||.=..-.+.++|++++...--+...+.+++. .++-.+.+.
T Consensus 83 IliCGTGiG~sIaANKv~GIRAAlc~d~~sA~laR~hNnANVL~lG~R 130 (166)
T 3s5p_A 83 ILVCGTGIGISIAANKMKGIRCALCSTEYDAEMARKHNNANALALGGR 130 (166)
T ss_dssp EEEESSSHHHHHHHHTSTTCCEEECSSHHHHHHHHHTTCCCEEEEETT
T ss_pred EEEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEccc
Confidence 4567787755666677999987665447777777763 444444443
No 401
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=67.64 E-value=12 Score=24.42 Aligned_cols=41 Identities=15% Similarity=0.093 Sum_probs=32.3
Q ss_pred CCCCCeEEEecC--CchHHHHHHHHHCCCCeEEEeeh-HHHHHhC
Q 034578 21 FNNIRSMVDVGG--GTGTVLAEIVKSYPHIKGINFDL-QHVIATA 62 (90)
Q Consensus 21 ~~~~~~vlDvG~--G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a 62 (90)
..+..+||-.|+ |.|..+..+++.. ++++++.+. ++-.+.+
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~ 190 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLK-GCRVVGIAGGAEKCRFL 190 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 566789999997 5788888888876 459999997 7666655
No 402
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=67.48 E-value=10 Score=23.38 Aligned_cols=59 Identities=14% Similarity=0.115 Sum_probs=32.4
Q ss_pred CeEEEecCCc-hH-HHHHHHHHCCCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCCCCCcccEEEee
Q 034578 25 RSMVDVGGGT-GT-VLAEIVKSYPHIKGINFDL-QHVIATAPTHEGVSHVGGDMFDAIPNADAVFMK 88 (90)
Q Consensus 25 ~~vlDvG~G~-G~-~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~~~p~~D~i~l~ 88 (90)
.+|.=+|+|. |. ++..+.+. +.+++++|. ++..+...+. .++.. +..+.+..+|+|++.
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~-g~~~~--~~~~~~~~~DvVi~a 90 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGS--GFKVVVGSRNPKRTARLFPS-AAQVT--FQEEAVSSPEVIFVA 90 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCCEEEEESSHHHHHHHSBT-TSEEE--EHHHHTTSCSEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc-CCcee--cHHHHHhCCCEEEEC
Confidence 4688888763 33 33334333 347888997 6655544332 33332 332234457888764
No 403
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=67.36 E-value=9 Score=26.76 Aligned_cols=32 Identities=22% Similarity=0.258 Sum_probs=26.9
Q ss_pred CCeEEEecCCchHHHHH--HHHHCCCCeEEEeeh
Q 034578 24 IRSMVDVGGGTGTVLAE--IVKSYPHIKGINFDL 55 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~--l~~~~p~~~~~~~D~ 55 (90)
...|+=||+|.+.+..+ +.++.++.+++.+|.
T Consensus 11 ~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~ 44 (493)
T 1m6i_A 11 HVPFLLIGGGTAAFAAARSIRARDPGARVLIVSE 44 (493)
T ss_dssp EEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEES
T ss_pred cCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeC
Confidence 45799999999887777 777778999999996
No 404
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=67.21 E-value=19 Score=24.17 Aligned_cols=46 Identities=13% Similarity=0.026 Sum_probs=29.0
Q ss_pred hhhhHHHHHhhcccCCCCCCCeEEEecCCchHH----HHHHHHHCCCCeEEEeeh
Q 034578 5 TKITMKAFVSHYKVDGFNNIRSMVDVGGGTGTV----LAEIVKSYPHIKGINFDL 55 (90)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~----~~~l~~~~p~~~~~~~D~ 55 (90)
+...+..+++.+++ .....| +++|+|.+ +..+...+|+.+++++|-
T Consensus 178 ~~t~g~EI~eq~~~---~~d~vv--~~vGgGG~~~Gi~~~~k~~~p~v~vigVep 227 (344)
T 3vc3_A 178 FETTGPEIWEDTNG---QVDIFV--MGIGSGGTVSGVGQYLKSKNPNVKIYGVEP 227 (344)
T ss_dssp HHTHHHHHHHHTTT---CCCEEE--EECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHHHHHHHHHhCC---CceEEE--EecCCccchHHHhhhhHhhCCCceEEEEcC
Confidence 34566777777762 222233 44555543 455667789999999995
No 405
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=67.20 E-value=13 Score=24.38 Aligned_cols=33 Identities=12% Similarity=-0.024 Sum_probs=19.7
Q ss_pred CCCeEEEecCCchHHHHHHHHHCCCCeEEEeeh
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL 55 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~ 55 (90)
...+||=||||.=.....-.-.--+++++++|.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap 44 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSP 44 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcC
Confidence 457899999985443333222223567777774
No 406
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=67.10 E-value=2.7 Score=30.68 Aligned_cols=31 Identities=19% Similarity=0.383 Sum_probs=0.0
Q ss_pred eEEEecCCchHHHHHHHHHCCC------------CeEEEeeh-H
Q 034578 26 SMVDVGGGTGTVLAEIVKSYPH------------IKGINFDL-Q 56 (90)
Q Consensus 26 ~vlDvG~G~G~~~~~l~~~~p~------------~~~~~~D~-p 56 (90)
+|+|+|-|+|.......+.+.. ++++.+|. |
T Consensus 61 ~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p 104 (689)
T 3pvc_A 61 IFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYP 104 (689)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSC
T ss_pred EEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCC
No 407
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=67.09 E-value=7.5 Score=23.02 Aligned_cols=61 Identities=16% Similarity=0.184 Sum_probs=38.3
Q ss_pred CeEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCCC--C----CcccEEEe
Q 034578 25 RSMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATAPTHEGVSHVGGDMFDA--I----PNADAVFM 87 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~~--~----p~~D~i~l 87 (90)
.+++=.| |+|.++..++++. .+.++++++. +...+.. ...+++++.+|+.++ + ..+|+++.
T Consensus 4 ~~ilVtG-atG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 73 (206)
T 1hdo_A 4 KKIAIFG-ATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-GPRPAHVVVGDVLQAADVDKTVAGQDAVIV 73 (206)
T ss_dssp CEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-SCCCSEEEESCTTSHHHHHHHHTTCSEEEE
T ss_pred CEEEEEc-CCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc-cCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 4566565 4677777776653 3578899987 5432211 146789999999862 2 23677764
No 408
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=67.03 E-value=19 Score=22.45 Aligned_cols=53 Identities=15% Similarity=0.159 Sum_probs=32.5
Q ss_pred CCeEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhCCC--CCCeeEEEecCCC
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATAPT--HEGVSHVGGDMFD 77 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a~~--~~rv~~~~~d~~~ 77 (90)
.+++|=.|++.| ++.++++++ .+.++++++. ++..+...+ ..++.++..|+.+
T Consensus 9 ~k~vlITGas~g-IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~ 66 (261)
T 3n74_A 9 GKVALITGAGSG-FGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISK 66 (261)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTS
T ss_pred CCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCC
Confidence 456777776544 444444332 3678899997 544433222 4678888899876
No 409
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=67.02 E-value=7.6 Score=25.01 Aligned_cols=64 Identities=16% Similarity=0.077 Sum_probs=38.4
Q ss_pred CCCeEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhCC------CCCCeeEE-EecCCCC--CC----cccEEE
Q 034578 23 NIRSMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATAP------THEGVSHV-GGDMFDA--IP----NADAVF 86 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a~------~~~rv~~~-~~d~~~~--~p----~~D~i~ 86 (90)
...+||=.|+ +|.++..++++. .+.++++++. +.-.+... ...+++++ .+|+.++ +. ..|+|+
T Consensus 10 ~~~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 88 (342)
T 1y1p_A 10 EGSLVLVTGA-NGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA 88 (342)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred CCCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEE
Confidence 3457776664 677777666553 3568888886 43322111 12578888 7998762 22 258776
Q ss_pred e
Q 034578 87 M 87 (90)
Q Consensus 87 l 87 (90)
-
T Consensus 89 h 89 (342)
T 1y1p_A 89 H 89 (342)
T ss_dssp E
T ss_pred E
Confidence 3
No 410
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=67.02 E-value=11 Score=25.54 Aligned_cols=44 Identities=23% Similarity=0.154 Sum_probs=33.1
Q ss_pred CCCCCeEEEecCCc-hHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 21 FNNIRSMVDVGGGT-GTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 21 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
..+..+||=+|+|. |.++..+++..-..+++++|. ++-.+.+++
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~ 256 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKE 256 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 45567888898864 889999999875448999997 766666554
No 411
>3ryc_B Tubulin beta chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_B* 3ryh_B* 3ryi_B* 3ut5_B* 4eb6_B* 4f6r_B* 4f61_B* 3hke_B* 3du7_B* 3e22_B* 3hkc_B* 3hkd_B* 3hkb_B* 3n2g_B* 3n2k_B* 1z2b_B* 2xrp_A* 4aqv_B* 4aqw_B* 4atu_A* ...
Probab=66.99 E-value=6.4 Score=27.81 Aligned_cols=33 Identities=27% Similarity=0.570 Sum_probs=22.7
Q ss_pred CCCCCeEEEecCCchH-----HHHHHHHHCCCCeEEEe
Q 034578 21 FNNIRSMVDVGGGTGT-----VLAEIVKSYPHIKGINF 53 (90)
Q Consensus 21 ~~~~~~vlDvG~G~G~-----~~~~l~~~~p~~~~~~~ 53 (90)
+.+...+-.+|||||. ++..|...||+.....+
T Consensus 130 lqGf~i~hSlgGGTGSG~gs~lle~L~~ey~kk~~~~~ 167 (445)
T 3ryc_B 130 LQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTF 167 (445)
T ss_dssp EEEEEEEEESSSSHHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred cceEEEEeecCCCCCCcHHHHHHHHHHHHcCccccceE
Confidence 4445678899999985 45557778998654444
No 412
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=66.91 E-value=9.7 Score=25.60 Aligned_cols=43 Identities=19% Similarity=0.072 Sum_probs=32.4
Q ss_pred CCCCeEEEecCC-chHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 22 NNIRSMVDVGGG-TGTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 22 ~~~~~vlDvG~G-~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
.+..+||-+|+| .|.++..+++..-..++++.+. ++-.+.+++
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~ 238 (380)
T 1vj0_A 194 FAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE 238 (380)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH
Confidence 345789999965 5889999999874368999996 766666554
No 413
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=66.87 E-value=11 Score=24.88 Aligned_cols=64 Identities=19% Similarity=0.235 Sum_probs=38.4
Q ss_pred CCCeEEEecCCc-h-HHHHHHHHHCCCCeEEEeeh-HHHHHhCCC-----CCCeeEEEecCCCCCCcccEEEee
Q 034578 23 NIRSMVDVGGGT-G-TVLAEIVKSYPHIKGINFDL-QHVIATAPT-----HEGVSHVGGDMFDAIPNADAVFMK 88 (90)
Q Consensus 23 ~~~~vlDvG~G~-G-~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-----~~rv~~~~~d~~~~~p~~D~i~l~ 88 (90)
+..+|.=||+|+ | .++..++.+...-.++.+|+ ++....+.. .++++.. .|+ +.+.++|+|+..
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t-~d~-~~l~~aD~Vi~a 84 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEIS-KDL-SASAHSKVVIFT 84 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEEE-SCG-GGGTTCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEe-CCH-HHHCCCCEEEEc
Confidence 346899999996 3 26666666654447999998 532211111 2466653 675 667779999864
No 414
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=66.43 E-value=5.9 Score=25.63 Aligned_cols=60 Identities=13% Similarity=0.105 Sum_probs=37.1
Q ss_pred eEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCCC------CCcccEEEe
Q 034578 26 SMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATAPTHEGVSHVGGDMFDA------IPNADAVFM 87 (90)
Q Consensus 26 ~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~~------~p~~D~i~l 87 (90)
+||=.| |+|.++..++++. .+.++++++. +.-.+.. ...+++++.+|+.++ +...|+|+-
T Consensus 15 ~ilVtG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l-~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 83 (342)
T 2x4g_A 15 KYAVLG-ATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL-AYLEPECRVAEMLDHAGLERALRGLDGVIF 83 (342)
T ss_dssp EEEEES-TTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG-GGGCCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred EEEEEC-CCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh-ccCCeEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 677666 4777777776553 3568899886 3322111 123688999999762 233677764
No 415
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=66.35 E-value=19 Score=23.13 Aligned_cols=53 Identities=17% Similarity=0.258 Sum_probs=33.4
Q ss_pred CCeEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhCCC-----CCCeeEEEecCCC
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATAPT-----HEGVSHVGGDMFD 77 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a~~-----~~rv~~~~~d~~~ 77 (90)
.+.+|=-|++.| ++.++++++ .+++++..|+ ++.++...+ ..++.++..|+.+
T Consensus 7 gKvalVTGas~G-IG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~ 67 (254)
T 4fn4_A 7 NKVVIVTGAGSG-IGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSK 67 (254)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS
T ss_pred CCEEEEeCCCCH-HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC
Confidence 456666666555 455554443 4788999997 554443321 4678888888876
No 416
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=66.16 E-value=14 Score=23.20 Aligned_cols=53 Identities=15% Similarity=0.106 Sum_probs=33.4
Q ss_pred CCeEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhCCC--CCCeeEEEecCCC
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATAPT--HEGVSHVGGDMFD 77 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a~~--~~rv~~~~~d~~~ 77 (90)
.+++|=.|++. .++.++++++ .+.++++.+. ++.++...+ ..++.++..|+.+
T Consensus 8 gk~~lVTGas~-gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~ 65 (255)
T 4eso_A 8 GKKAIVIGGTH-GMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIAD 65 (255)
T ss_dssp TCEEEEETCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTC
T ss_pred CCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCC
Confidence 45677777654 4455544443 3678999997 554443322 3578888899876
No 417
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=66.07 E-value=6.1 Score=24.33 Aligned_cols=51 Identities=18% Similarity=0.141 Sum_probs=31.2
Q ss_pred eEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhCCC--CCCeeEEEecCCC
Q 034578 26 SMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATAPT--HEGVSHVGGDMFD 77 (90)
Q Consensus 26 ~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a~~--~~rv~~~~~d~~~ 77 (90)
++|=.|++ |.++.++++++ .+.++++.+. ++.++...+ ..++.++..|+.+
T Consensus 3 ~vlVTGas-~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~ 58 (230)
T 3guy_A 3 LIVITGAS-SGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLAS 58 (230)
T ss_dssp CEEEESTT-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTC
T ss_pred EEEEecCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCC
Confidence 45656654 45555554443 3577888887 554443322 4678888888876
No 418
>3ryc_A Tubulin alpha chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_A* 3ryh_A* 3ryi_A* 3ut5_A* 4eb6_A* 4f61_A* 4f6r_A* 3hke_A* 3hkc_A* 3hkd_A* 3hkb_A* 3n2g_A* 3n2k_A* 1sa0_A* 1sa1_A* 3edl_F* 1ffx_A* 1ia0_A* 2hxf_A* 2hxh_A* ...
Probab=66.06 E-value=8.1 Score=27.36 Aligned_cols=42 Identities=17% Similarity=0.411 Sum_probs=27.0
Q ss_pred HHHhhcccCCCCCCCeEEEecCCchH-----HHHHHHHHCCCCeEEEee
Q 034578 11 AFVSHYKVDGFNNIRSMVDVGGGTGT-----VLAEIVKSYPHIKGINFD 54 (90)
Q Consensus 11 ~~~~~~~~~~~~~~~~vlDvG~G~G~-----~~~~l~~~~p~~~~~~~D 54 (90)
..++..+. +.+...+-.+|||||. ++..|...||+.....+-
T Consensus 124 k~~E~cD~--lqGF~i~hSlgGGTGSG~gs~lle~L~~ey~kk~~~~~~ 170 (451)
T 3ryc_A 124 KLADQCTG--LQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFS 170 (451)
T ss_dssp HHHHTCSS--CCEEEEEEESSSHHHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHcCCC--ccceEEEeccCCCCCccHHHHHHHHHHHhcCcceEEEEE
Confidence 33444452 5556778899999984 555566789876544443
No 419
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=65.77 E-value=12 Score=23.51 Aligned_cols=53 Identities=15% Similarity=0.075 Sum_probs=32.3
Q ss_pred CCeEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhCC-----CCCCeeEEEecCCC
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATAP-----THEGVSHVGGDMFD 77 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a~-----~~~rv~~~~~d~~~ 77 (90)
.+++|=.|++.| ++.++++++ .+.++++++. ++..+... ...++.++..|+.+
T Consensus 7 ~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 67 (252)
T 3h7a_A 7 NATVAVIGAGDY-IGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARN 67 (252)
T ss_dssp SCEEEEECCSSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTC
T ss_pred CCEEEEECCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCC
Confidence 456777776554 444444443 3678888886 44322211 14678999999876
No 420
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=65.63 E-value=21 Score=23.26 Aligned_cols=42 Identities=17% Similarity=0.117 Sum_probs=31.3
Q ss_pred CCCCCeEEEecC--CchHHHHHHHHHCCCCeEEEeeh-HHHHHhCC
Q 034578 21 FNNIRSMVDVGG--GTGTVLAEIVKSYPHIKGINFDL-QHVIATAP 63 (90)
Q Consensus 21 ~~~~~~vlDvG~--G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~ 63 (90)
.....++|-.|+ |.|..+..+++.. ++++++.|. ++..+.++
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~ 187 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKIAYLK 187 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHH
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHH
Confidence 556789999996 6777888888775 468999997 66555543
No 421
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=65.32 E-value=14 Score=24.67 Aligned_cols=32 Identities=13% Similarity=0.134 Sum_probs=27.1
Q ss_pred CCeEEEecCCchHHHHHHHHHCCCCeEEEeeh
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL 55 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~ 55 (90)
...|+=||+|.+.++.++.-+..+.+++++|.
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~ 57 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYER 57 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeC
Confidence 35799999999888887777777899999996
No 422
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=65.24 E-value=6.2 Score=27.45 Aligned_cols=63 Identities=14% Similarity=0.195 Sum_probs=37.7
Q ss_pred CeEEEecCCchHHHHHH----HHH---CCCCeEEEeeh-HHHHHhCCC------CCCeeEEE-ecCCCCCCcccEEEee
Q 034578 25 RSMVDVGGGTGTVLAEI----VKS---YPHIKGINFDL-QHVIATAPT------HEGVSHVG-GDMFDAIPNADAVFMK 88 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l----~~~---~p~~~~~~~D~-p~~~~~a~~------~~rv~~~~-~d~~~~~p~~D~i~l~ 88 (90)
.+|.=||+|+. ++..+ +.+ .|.-.++.+|+ ++.++.+.. ....++.. .|..+.+.++|+|+..
T Consensus 3 ~KI~IIGaG~v-~~~~l~~~l~~~~~~l~~~el~L~Di~~~~~~~~~~~~~~~~~~~~~v~~t~d~~~al~~AD~Viit 80 (417)
T 1up7_A 3 MRIAVIGGGSS-YTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQ 80 (417)
T ss_dssp CEEEEETTTCT-THHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHHTTCSEEEEC
T ss_pred CEEEEECCCHH-HHHHHHHHHHhcccCCCcCEEEEEeCCHHHHHHHHHHHHHHhhCCeEEEEeCCHHHHhCCCCEEEEc
Confidence 46888999987 66554 552 34557999998 654332211 11245554 3543456678998864
No 423
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=65.20 E-value=21 Score=22.61 Aligned_cols=54 Identities=26% Similarity=0.113 Sum_probs=32.9
Q ss_pred CCeEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhC----CC--CCCeeEEEecCCCC
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATA----PT--HEGVSHVGGDMFDA 78 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a----~~--~~rv~~~~~d~~~~ 78 (90)
.+++|=.|++ |.++.++++++ .+.++++.+. +.-.+.+ ++ ..++.++..|+.++
T Consensus 12 ~k~vlITGas-~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~ 74 (311)
T 3o26_A 12 RRCAVVTGGN-KGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDP 74 (311)
T ss_dssp CCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSC
T ss_pred CcEEEEecCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCc
Confidence 4567766665 44555554443 3678888886 4332221 11 35799999999764
No 424
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=65.00 E-value=6.7 Score=28.42 Aligned_cols=52 Identities=17% Similarity=0.250 Sum_probs=34.5
Q ss_pred CeEEEecCCchHHHHHHHHHC---CCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCC
Q 034578 25 RSMVDVGGGTGTVLAEIVKSY---PHIKGINFDL-QHVIATAPTHEGVSHVGGDMFD 77 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~---p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~ 77 (90)
.+||=.| |+|.++..++++. ++.++++++. +...+......+++++.+|+.+
T Consensus 316 ~~VLVTG-atG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d 371 (660)
T 1z7e_A 316 TRVLILG-VNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISI 371 (660)
T ss_dssp EEEEEET-TTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTT
T ss_pred ceEEEEc-CCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCC
Confidence 3566555 5788877777654 3568999997 4333222234679999999986
No 425
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=64.89 E-value=5.4 Score=28.44 Aligned_cols=27 Identities=15% Similarity=0.315 Sum_probs=16.8
Q ss_pred hHHHHHhhcccCCCCCCCeEEEecCCchHH
Q 034578 8 TMKAFVSHYKVDGFNNIRSMVDVGGGTGTV 37 (90)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~ 37 (90)
....+...++ ..+...++||||||=.+
T Consensus 125 ~~~gv~~~~~---~~~~~lviDIGGGStEl 151 (513)
T 1u6z_A 125 IFMGVEHTQP---EKGRKLVIDIGGGSTEL 151 (513)
T ss_dssp HHHHHHHHSC---CCSCEEEEEECSSCEEE
T ss_pred HHHHHHhhcc---CCCCEEEEEECCCcEEE
Confidence 3444555555 22357899999997443
No 426
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=64.80 E-value=9.9 Score=26.09 Aligned_cols=31 Identities=16% Similarity=0.224 Sum_probs=25.9
Q ss_pred CeEEEecCCchHHHHHHHHHCCCCeEEEeeh
Q 034578 25 RSMVDVGGGTGTVLAEIVKSYPHIKGINFDL 55 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~ 55 (90)
..|+=||+|.+.+..+...+..+.+++.+|.
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~ 35 (450)
T 1ges_A 5 YDYIAIGGGSGGIASINRAAMYGQKCALIEA 35 (450)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEEES
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEcC
Confidence 4689999999988777776667899999994
No 427
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=64.53 E-value=3.9 Score=25.26 Aligned_cols=48 Identities=17% Similarity=0.148 Sum_probs=30.5
Q ss_pred EEecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCCC--CCeeEEEecC
Q 034578 28 VDVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPTH--EGVSHVGGDM 75 (90)
Q Consensus 28 lDvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~~--~rv~~~~~d~ 75 (90)
-=+.||||.=..-.+.++|++++...--|...+.+++. .++-.+.+.+
T Consensus 81 GIliCGTGiG~sIaANKv~GIRAAlc~d~~sA~~aR~hNnANVL~lG~Rv 130 (169)
T 3ph3_A 81 GIVICGTGLGISIAANKVPGIRAAVCTNSYMARMSREHNDANILALGERV 130 (169)
T ss_dssp EEEEESSSHHHHHHHTTSTTCCEEECSSHHHHHHHHHTTCCSEEEEETTT
T ss_pred EEEEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccc
Confidence 34567777756666677999987665447777777763 4444444433
No 428
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=64.53 E-value=23 Score=22.24 Aligned_cols=52 Identities=15% Similarity=0.094 Sum_probs=32.7
Q ss_pred CCeEEEecCCchH---HHHHHHHHCCCCeEEEeeh-HHHHHhCC-----CCCCeeEEEecCCC
Q 034578 24 IRSMVDVGGGTGT---VLAEIVKSYPHIKGINFDL-QHVIATAP-----THEGVSHVGGDMFD 77 (90)
Q Consensus 24 ~~~vlDvG~G~G~---~~~~l~~~~p~~~~~~~D~-p~~~~~a~-----~~~rv~~~~~d~~~ 77 (90)
.+++|=.|++.|. ++..|+++ +.++++.+. ++..+... ...++.++..|+.+
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 71 (264)
T 3ucx_A 11 DKVVVISGVGPALGTTLARRCAEQ--GADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITD 71 (264)
T ss_dssp TCEEEEESCCTTHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred CcEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC
Confidence 4677777775543 44444443 678888887 54333221 14678899999876
No 429
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=64.47 E-value=9.5 Score=27.00 Aligned_cols=32 Identities=22% Similarity=0.198 Sum_probs=23.7
Q ss_pred CCeEEEecCCchHHHHHHHHH--C-CCCeEEEeeh
Q 034578 24 IRSMVDVGGGTGTVLAEIVKS--Y-PHIKGINFDL 55 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~--~-p~~~~~~~D~ 55 (90)
...|+=||+|...++.++.-+ . ++.+++++|.
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~ 59 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQA 59 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEEC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeC
Confidence 457999999987755544433 3 7899999995
No 430
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=64.26 E-value=7.1 Score=24.95 Aligned_cols=31 Identities=10% Similarity=0.135 Sum_probs=24.9
Q ss_pred CeEEEecCCchHHHHHHHHHCCCCeEEEeeh
Q 034578 25 RSMVDVGGGTGTVLAEIVKSYPHIKGINFDL 55 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~ 55 (90)
..|+=||+|.+.++.+...+..+.+++.+|.
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~ 38 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQASVKIIES 38 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEEc
Confidence 4799999999887777655556789999996
No 431
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=64.22 E-value=23 Score=22.19 Aligned_cols=53 Identities=9% Similarity=0.054 Sum_probs=31.8
Q ss_pred CCeEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhCC-----CCCCeeEEEecCCC
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATAP-----THEGVSHVGGDMFD 77 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a~-----~~~rv~~~~~d~~~ 77 (90)
.+++|=.|++. .++.++++++ .+.++++.|. ++..+... ...++.++..|+.+
T Consensus 12 ~k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d 72 (256)
T 3gaf_A 12 DAVAIVTGAAA-GIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTD 72 (256)
T ss_dssp TCEEEECSCSS-HHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred CCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCC
Confidence 35666666654 4444444432 2577888887 44333221 24678899999876
No 432
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=63.91 E-value=19 Score=22.17 Aligned_cols=52 Identities=17% Similarity=0.195 Sum_probs=31.7
Q ss_pred CeEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhC-----C-CCCCeeEEEecCCC
Q 034578 25 RSMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATA-----P-THEGVSHVGGDMFD 77 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a-----~-~~~rv~~~~~d~~~ 77 (90)
+++|=.|+ +|.++.++++++ .+.++++++. +...+.. + ...++.++.+|+.+
T Consensus 3 k~vlItGa-sggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 63 (250)
T 2cfc_A 3 RVAIVTGA-SSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVAD 63 (250)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTC
T ss_pred CEEEEeCC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCC
Confidence 35665665 566665555543 3568888887 4433221 1 13578899999876
No 433
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=63.63 E-value=4.8 Score=27.31 Aligned_cols=62 Identities=15% Similarity=0.114 Sum_probs=37.8
Q ss_pred CeEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HH---HHHhCC--------------CCCCeeEEEecCCC-C-C---
Q 034578 25 RSMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QH---VIATAP--------------THEGVSHVGGDMFD-A-I--- 79 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~---~~~~a~--------------~~~rv~~~~~d~~~-~-~--- 79 (90)
.+||=.| |+|.++..++++. ...++++++. +. ..+... ...++.++.+|+.+ + +
T Consensus 70 ~~vlVTG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~ 148 (427)
T 4f6c_A 70 GNTLLTG-ATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVVLP 148 (427)
T ss_dssp EEEEEEC-TTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCCCS
T ss_pred CEEEEec-CCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCCCc
Confidence 4666555 5888888888875 3457888886 43 211111 12689999999987 2 2
Q ss_pred CcccEEEe
Q 034578 80 PNADAVFM 87 (90)
Q Consensus 80 p~~D~i~l 87 (90)
...|+|+-
T Consensus 149 ~~~d~Vih 156 (427)
T 4f6c_A 149 ENMDTIIH 156 (427)
T ss_dssp SCCSEEEE
T ss_pred CCCCEEEE
Confidence 23677763
No 434
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=63.60 E-value=8.2 Score=27.10 Aligned_cols=32 Identities=22% Similarity=0.325 Sum_probs=24.0
Q ss_pred CCeEEEecCCchHHHHHHHHHC------------CCCeEEEeeh
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSY------------PHIKGINFDL 55 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~------------p~~~~~~~D~ 55 (90)
...|+=||+|+..++.++..+. ++++++++|.
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~ 50 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIES 50 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeC
Confidence 3579999999877655554443 7899999995
No 435
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=63.57 E-value=7.7 Score=24.86 Aligned_cols=30 Identities=17% Similarity=0.325 Sum_probs=22.6
Q ss_pred eEEEecCCchHHHHHHHHHCCCCeEEEeeh
Q 034578 26 SMVDVGGGTGTVLAEIVKSYPHIKGINFDL 55 (90)
Q Consensus 26 ~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~ 55 (90)
-|+=||+|++-++.++..+.-+.+++.+|.
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g~~V~liE~ 37 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRANLKTVMIER 37 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEec
Confidence 388899999887766544444788899884
No 436
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi} SCOP: c.121.1.0 PDB: 3k7s_A* 3k7o_A* 3k8c_A* 3m1p_A
Probab=63.20 E-value=5.3 Score=24.89 Aligned_cols=47 Identities=15% Similarity=0.217 Sum_probs=30.2
Q ss_pred EecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCCC--CCeeEEEecC
Q 034578 29 DVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPTH--EGVSHVGGDM 75 (90)
Q Consensus 29 DvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~~--~rv~~~~~d~ 75 (90)
=+.||||.=..-.+.++|++++...--+...+.+++. .++-.+.+.+
T Consensus 86 IliCGTGiG~sIaANKv~GIRAAlc~d~~sA~laR~HNnANVL~lG~Rv 134 (179)
T 3k7p_A 86 VLAAGSGIGMSIAANKVPGVRAALCHDHYTAAMSRIHNDANIVCVGERT 134 (179)
T ss_dssp EEEESSSHHHHHHHHTSTTCCEEECCSHHHHHHHHHTTCCSEEEEETTT
T ss_pred EEEccCcHHHhhHhhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccc
Confidence 4567777755666677999997665447777777763 4454444443
No 437
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=63.17 E-value=15 Score=24.14 Aligned_cols=42 Identities=12% Similarity=0.110 Sum_probs=32.7
Q ss_pred CCCCCeEEEecC--CchHHHHHHHHHCCCCeEEEeeh-HHHHHhCC
Q 034578 21 FNNIRSMVDVGG--GTGTVLAEIVKSYPHIKGINFDL-QHVIATAP 63 (90)
Q Consensus 21 ~~~~~~vlDvG~--G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~ 63 (90)
+....++|-.|+ |.|..+..+++.. ++++++++. ++-.+.++
T Consensus 164 ~~~g~~vlV~Gasg~iG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~ 208 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGVSVAAIQIAKLF-GARVIATAGSEDKLRRAK 208 (343)
T ss_dssp CCTTCEEEECSTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHH
Confidence 456689999997 6889999999876 468999997 66555544
No 438
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=63.16 E-value=24 Score=22.78 Aligned_cols=53 Identities=17% Similarity=0.100 Sum_probs=33.1
Q ss_pred CCeEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhCC-----CCCCeeEEEecCCC
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATAP-----THEGVSHVGGDMFD 77 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a~-----~~~rv~~~~~d~~~ 77 (90)
.+++|=.|++ |.++.++++++ .+.++++.+. ++.++... ...++.++..|+.+
T Consensus 31 gk~vlVTGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d 91 (301)
T 3tjr_A 31 GRAAVVTGGA-SGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRH 91 (301)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred CCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCC
Confidence 3567777765 44555444443 3578888887 54443322 14678999999877
No 439
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=63.10 E-value=5 Score=25.34 Aligned_cols=59 Identities=17% Similarity=0.244 Sum_probs=36.0
Q ss_pred EEEecCCchHHHHHHHHHC----CCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCCC------CCcccEEEe
Q 034578 27 MVDVGGGTGTVLAEIVKSY----PHIKGINFDL-QHVIATAPTHEGVSHVGGDMFDA------IPNADAVFM 87 (90)
Q Consensus 27 vlDvG~G~G~~~~~l~~~~----p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~~------~p~~D~i~l 87 (90)
||=. ||+|.++..++++. |+.++++++. +.-.+.. ...+++++.+|+.++ +..+|+++.
T Consensus 3 ilVt-GatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l-~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~ 72 (287)
T 2jl1_A 3 IAVT-GATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTL-ADQGVEVRHGDYNQPESLQKAFAGVSKLLF 72 (287)
T ss_dssp EEET-TTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHH-HHTTCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred EEEE-cCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHH-hhcCCeEEEeccCCHHHHHHHHhcCCEEEE
Confidence 4433 46888888877664 3567888886 3211110 024688999999872 233687764
No 440
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=62.98 E-value=17 Score=23.94 Aligned_cols=42 Identities=17% Similarity=0.083 Sum_probs=31.0
Q ss_pred CCCeEEEecCC-chHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 23 NIRSMVDVGGG-TGTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 23 ~~~~vlDvG~G-~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
+..+||-+|+| .|.++..+++..-..+++++|. ++-.+.+++
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~ 210 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKK 210 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 66789999986 4888999998864338999997 665555543
No 441
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=62.75 E-value=11 Score=25.21 Aligned_cols=32 Identities=13% Similarity=0.161 Sum_probs=25.9
Q ss_pred CCeEEEecCCchHHHHHHHHHCCCCeEEEeeh
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL 55 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~ 55 (90)
...|+=||+|.+.++.++..+..+.+++++|.
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~ 36 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYER 36 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEec
Confidence 35799999998887777766666889999996
No 442
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=62.25 E-value=23 Score=22.56 Aligned_cols=53 Identities=13% Similarity=0.114 Sum_probs=32.4
Q ss_pred CCeEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhCCC--CCCeeEEEecCCC
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATAPT--HEGVSHVGGDMFD 77 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a~~--~~rv~~~~~d~~~ 77 (90)
.+++|=.|++. .++.++++++ .+.++++.|. ++.++...+ ..++.++..|+.+
T Consensus 5 gk~~lVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~ 62 (281)
T 3zv4_A 5 GEVALITGGAS-GLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRS 62 (281)
T ss_dssp TCEEEEETCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTC
T ss_pred CCEEEEECCCc-HHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCC
Confidence 35677677654 4444444443 3678899987 544433221 3678888888876
No 443
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=62.15 E-value=3.6 Score=26.33 Aligned_cols=47 Identities=13% Similarity=-0.092 Sum_probs=30.8
Q ss_pred EEEecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCC--CCCeeEEEe
Q 034578 27 MVDVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPT--HEGVSHVGG 73 (90)
Q Consensus 27 vlDvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~--~~rv~~~~~ 73 (90)
.-=+.||||.=..-.+.++|++++...--|.....+++ +.++-.+.+
T Consensus 69 ~GIliCGTGiG~siaANKv~GIRAAlc~d~~sA~laR~hNnANVL~lG~ 117 (214)
T 3ono_A 69 FVVTGCGTGQGALMSCNLHPGVVCGYCLEPSDAFLFNQINNGNAISLAF 117 (214)
T ss_dssp EEEEEESSSHHHHHHHHTSTTCCEEECSSHHHHHHHHHHTCCSEEEEES
T ss_pred EEEEEcCCcHHHHHHHhcCCCeEEEEeCCHHHHHHHHHHcCCcEEEecC
Confidence 34467888876666677899998765544777777776 344444443
No 444
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=62.11 E-value=5.9 Score=28.80 Aligned_cols=31 Identities=19% Similarity=0.383 Sum_probs=0.0
Q ss_pred eEEEecCCchHHHHHHHHHC------------CCCeEEEeeh-H
Q 034578 26 SMVDVGGGTGTVLAEIVKSY------------PHIKGINFDL-Q 56 (90)
Q Consensus 26 ~vlDvG~G~G~~~~~l~~~~------------p~~~~~~~D~-p 56 (90)
+|+|+|-|+|.......+.+ ..++++.+|. |
T Consensus 69 ~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p 112 (676)
T 3ps9_A 69 VVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFP 112 (676)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSC
T ss_pred EEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCC
No 445
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=62.10 E-value=28 Score=22.85 Aligned_cols=46 Identities=9% Similarity=0.101 Sum_probs=27.3
Q ss_pred hhHHHHHhhcccCCCCCCCeEEEecCCchH--HHHHHHHHCCCCeEEEeeh
Q 034578 7 ITMKAFVSHYKVDGFNNIRSMVDVGGGTGT--VLAEIVKSYPHIKGINFDL 55 (90)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~--~~~~l~~~~p~~~~~~~D~ 55 (90)
..+..+.+.++ .....-|+-+|+|.-. ++..+.+..|+.++++++.
T Consensus 169 t~~~Ei~~q~~---~~~d~vv~~vGtGGt~~Gi~~~lk~~~~~~~vigVe~ 216 (325)
T 1j0a_A 169 RAVGEIATQSE---VKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAV 216 (325)
T ss_dssp HHHHHHHHHCC---CCCSEEEEEESSSHHHHHHHHHHHHTTCCCEEEEEEC
T ss_pred HHHHHHHHhhC---CCCCEEEEeCCchHhHHHHHHHHHhcCCCceEEEEEe
Confidence 45666666664 2223345555555433 3344555679999999994
No 446
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=62.08 E-value=9.3 Score=26.87 Aligned_cols=32 Identities=25% Similarity=0.253 Sum_probs=23.6
Q ss_pred CCeEEEecCCchHHHHHHHHHC---CCCeEEEeeh
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSY---PHIKGINFDL 55 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~---p~~~~~~~D~ 55 (90)
...|+=||+|...++.++.-+. ++.+++++|.
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~ 39 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIES 39 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECC
Confidence 3579999999877555544433 7899999995
No 447
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=62.05 E-value=12 Score=23.18 Aligned_cols=52 Identities=10% Similarity=0.063 Sum_probs=33.0
Q ss_pred CeEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhCC-----CCCCeeEEEecCCC
Q 034578 25 RSMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATAP-----THEGVSHVGGDMFD 77 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a~-----~~~rv~~~~~d~~~ 77 (90)
.++|=.| |+|.++.++++++ .+.++++++. +...+... ...++.++.+|+.+
T Consensus 12 ~~vlVtG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 71 (255)
T 1fmc_A 12 KCAIITG-AGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITS 71 (255)
T ss_dssp CEEEETT-TTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred CEEEEEC-CccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCC
Confidence 5566555 5677777766654 3578888887 44332211 13578888999876
No 448
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=62.00 E-value=17 Score=23.83 Aligned_cols=42 Identities=5% Similarity=-0.011 Sum_probs=32.4
Q ss_pred CCCCCeEEEecC--CchHHHHHHHHHCCCCeEEEeeh-HHHHHhCC
Q 034578 21 FNNIRSMVDVGG--GTGTVLAEIVKSYPHIKGINFDL-QHVIATAP 63 (90)
Q Consensus 21 ~~~~~~vlDvG~--G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~ 63 (90)
..+..++|-.|+ |.|..+..+++.. ++++++.+. ++-.+.++
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~ 197 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMM-GCYVVGSAGSKEKVDLLK 197 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHH
Confidence 556789999996 6788888888876 468999997 66665554
No 449
>3c5y_A Ribose/galactose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.81A {Novosphingobium aromaticivorans}
Probab=61.99 E-value=3.9 Score=26.50 Aligned_cols=47 Identities=13% Similarity=-0.103 Sum_probs=29.9
Q ss_pred EEEecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCC--CCCeeEEEe
Q 034578 27 MVDVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPT--HEGVSHVGG 73 (90)
Q Consensus 27 vlDvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~--~~rv~~~~~ 73 (90)
.-=+.||||.=..-.+.++|++++...--|.....+++ +.++-.+.+
T Consensus 86 ~GIliCGTGiG~sIAANKv~GIRAAlc~d~~sA~laR~HNnANVL~lGa 134 (231)
T 3c5y_A 86 FVVTGCGTGMGSMLAANAMPGVFCGLVIDPTDAFLFGQINDGNAISMPY 134 (231)
T ss_dssp EEEEEESSSHHHHHHHHTSTTCCEEECCSHHHHHHHHHHTCCSEEEEES
T ss_pred eEEEEcCCcHHHHHHHhcCCCeEEEEeCCHHHHHHHHHhcCccEEEECC
Confidence 34466778876666677789998655444777777766 344444443
No 450
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=61.92 E-value=9.6 Score=24.16 Aligned_cols=31 Identities=16% Similarity=0.099 Sum_probs=23.9
Q ss_pred CeEEEecCCchHHHHHHHHHCCCCeEEEeeh
Q 034578 25 RSMVDVGGGTGTVLAEIVKSYPHIKGINFDL 55 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~ 55 (90)
..|+=||+|.+.++.+...+..+.+++.+|.
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~ 46 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYMLKTLVIGE 46 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred cCEEEECccHHHHHHHHHHHHCCCcEEEEec
Confidence 4799999999887666655545778899984
No 451
>2ppw_A Conserved domain protein; the putative RPIB, PSI-2, protein initiative, MCSG, structural genomics, midwest center for S genomics; HET: MSE; 2.01A {Streptococcus pneumoniae}
Probab=61.80 E-value=3.2 Score=26.64 Aligned_cols=47 Identities=15% Similarity=-0.023 Sum_probs=30.7
Q ss_pred EEEecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCC--CCCeeEEEe
Q 034578 27 MVDVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPT--HEGVSHVGG 73 (90)
Q Consensus 27 vlDvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~--~~rv~~~~~ 73 (90)
.-=+.||||.=..-.+.++|++++...--|.....+++ +.++-.+.+
T Consensus 70 ~GIliCGTGiG~sIAANKv~GIRAAlc~d~~sA~laR~HNnANVL~lG~ 118 (216)
T 2ppw_A 70 FVVTGCGTGVGAMLALNSFPGVVCGLAVDPTDAYLYSQINGGNALSIPY 118 (216)
T ss_dssp EEEEEESSSHHHHHHHTTSTTCCEEECSSHHHHHHHHHHTCCSEEEEES
T ss_pred eEEEEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHHhcCceEEEeCC
Confidence 44567888876666677899998655444777777776 344444443
No 452
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=61.76 E-value=11 Score=23.57 Aligned_cols=55 Identities=13% Similarity=-0.007 Sum_probs=32.6
Q ss_pred CCCeEEEecCC-chHHHHHHHHHC--CCCeEEEeeh-HH---HHHh-CCCCCCeeEEEecCCC
Q 034578 23 NIRSMVDVGGG-TGTVLAEIVKSY--PHIKGINFDL-QH---VIAT-APTHEGVSHVGGDMFD 77 (90)
Q Consensus 23 ~~~~vlDvG~G-~G~~~~~l~~~~--p~~~~~~~D~-p~---~~~~-a~~~~rv~~~~~d~~~ 77 (90)
..+++|=.|++ +|.++.++++++ .+.++++.+. +. .++. .++.+++.++..|+.+
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 75 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVAD 75 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTC
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCC
Confidence 45788888864 244444444443 3578888875 32 2221 1224568888899876
No 453
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=61.75 E-value=10 Score=23.35 Aligned_cols=61 Identities=18% Similarity=0.371 Sum_probs=39.1
Q ss_pred CeEEEecCCchHHHHHHHHHCC--C-CeEEEeeh-HHHHHhCCCCCCeeEEEecCCCC------CCcccEEEe
Q 034578 25 RSMVDVGGGTGTVLAEIVKSYP--H-IKGINFDL-QHVIATAPTHEGVSHVGGDMFDA------IPNADAVFM 87 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~p--~-~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~~------~p~~D~i~l 87 (90)
.++|=.| |+|.++.++++++- + .++++++. ++-.+. ....+++++.+|+.++ +...|+++.
T Consensus 24 k~vlVtG-atG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~ 94 (236)
T 3qvo_A 24 KNVLILG-AGGQIARHVINQLADKQTIKQTLFARQPAKIHK-PYPTNSQIIMGDVLNHAALKQAMQGQDIVYA 94 (236)
T ss_dssp EEEEEET-TTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCS-SCCTTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred cEEEEEe-CCcHHHHHHHHHHHhCCCceEEEEEcChhhhcc-cccCCcEEEEecCCCHHHHHHHhcCCCEEEE
Confidence 4566555 57777777777642 3 67888887 543221 1235799999999872 223688764
No 454
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=61.53 E-value=9.9 Score=25.01 Aligned_cols=59 Identities=19% Similarity=0.153 Sum_probs=39.4
Q ss_pred CCeEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCCC-------CCcccEEEe
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATAPTHEGVSHVGGDMFDA-------IPNADAVFM 87 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~~-------~p~~D~i~l 87 (90)
..+++=+|+ |.++..+++.. .+. ++++|. |+.++ .++ ..+.++.||..++ +..+|.++.
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~-~~~~~i~gd~~~~~~L~~a~i~~a~~vi~ 183 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKK-VLR-SGANFVHGDPTRVSDLEKANVRGARAVIV 183 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH-TTCEEEESCTTSHHHHHHTCSTTEEEEEE
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh-CCcEEEEeCCCCHHHHHhcChhhccEEEE
Confidence 347888876 66777766654 234 888998 77776 432 5678899998762 334787765
No 455
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=61.50 E-value=26 Score=21.67 Aligned_cols=53 Identities=9% Similarity=0.058 Sum_probs=33.0
Q ss_pred CCeEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCC
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATAPTHEGVSHVGGDMFD 77 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~ 77 (90)
.+++|=.|+ +|.++.++++++ .+.++++++. ++..+...+..++.++..|+.+
T Consensus 6 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~ 61 (246)
T 2ag5_A 6 GKVIILTAA-AQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTK 61 (246)
T ss_dssp TCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTC
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCC
Confidence 345666665 455555555443 3578899987 5555433333478889999876
No 456
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=61.47 E-value=11 Score=24.82 Aligned_cols=63 Identities=17% Similarity=0.213 Sum_probs=38.7
Q ss_pred CCeEEEecCCchHHHHHHHHHC---CCC-eEEEeeh-HHHHHhCC---CCCCeeEEEecCCCC------CCcccEEEe
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSY---PHI-KGINFDL-QHVIATAP---THEGVSHVGGDMFDA------IPNADAVFM 87 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~---p~~-~~~~~D~-p~~~~~a~---~~~rv~~~~~d~~~~------~p~~D~i~l 87 (90)
..+||=.| |+|.++..++++. ++. ++++++. +.-.+..+ ...+++++.+|+.+. +...|+|+-
T Consensus 21 ~k~vlVTG-atG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih 97 (344)
T 2gn4_A 21 NQTILITG-GTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIH 97 (344)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEE
Confidence 45777555 5777777666543 244 7888887 44322111 136899999999872 223677764
No 457
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=61.37 E-value=15 Score=24.61 Aligned_cols=32 Identities=31% Similarity=0.536 Sum_probs=21.5
Q ss_pred CCCeEEEecCCchHHHHH----HHHHCCCCeE--EEee
Q 034578 23 NIRSMVDVGGGTGTVLAE----IVKSYPHIKG--INFD 54 (90)
Q Consensus 23 ~~~~vlDvG~G~G~~~~~----l~~~~p~~~~--~~~D 54 (90)
+.-+|+|+|=|+|..... +.+..|+.++ +.+|
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~E 133 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFE 133 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEE
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeec
Confidence 345899999999985432 3345777654 5555
No 458
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=61.25 E-value=12 Score=25.04 Aligned_cols=32 Identities=16% Similarity=0.222 Sum_probs=24.6
Q ss_pred CCeEEEecCCchHHHHHHHHHCCCCeEEEeeh
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL 55 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~ 55 (90)
.-.|+=||+|.+.++.++.-+..+.+++++|.
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~ 54 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQSGIDCDVYEA 54 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCEEEEeC
Confidence 35799999998776666555555789999996
No 459
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=61.09 E-value=10 Score=24.96 Aligned_cols=42 Identities=10% Similarity=0.127 Sum_probs=31.6
Q ss_pred CCCCCeEEEecCC--chHHHHHHHHHCCCCeEEEeeh-HHHHHhCC
Q 034578 21 FNNIRSMVDVGGG--TGTVLAEIVKSYPHIKGINFDL-QHVIATAP 63 (90)
Q Consensus 21 ~~~~~~vlDvG~G--~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~ 63 (90)
..+..+||-+|+| .|.++..+++.. ++++++.|. ++-.+.++
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~ 186 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQIL-NFRLIAVTRNNKHTEELL 186 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHH
Confidence 5667899999986 688898888876 569999996 55444443
No 460
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=60.92 E-value=8.7 Score=25.79 Aligned_cols=31 Identities=13% Similarity=0.131 Sum_probs=23.0
Q ss_pred CeEEEecCCchHHHHHHHHHC---CCCeEEEeeh
Q 034578 25 RSMVDVGGGTGTVLAEIVKSY---PHIKGINFDL 55 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~---p~~~~~~~D~ 55 (90)
.+|+=||+|.+.+..+..-+. ++.+++.+|.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~ 35 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINK 35 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeC
Confidence 468999999887655544333 7889999995
No 461
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=60.88 E-value=12 Score=25.01 Aligned_cols=31 Identities=13% Similarity=0.134 Sum_probs=25.4
Q ss_pred CeEEEecCCchHHHHHHHHHCCCCeEEEeeh
Q 034578 25 RSMVDVGGGTGTVLAEIVKSYPHIKGINFDL 55 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~ 55 (90)
..|+=||+|.+.++.++..+-.+.+++++|.
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~ 36 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEK 36 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeC
Confidence 4689999998887777766666889999996
No 462
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=60.79 E-value=23 Score=22.35 Aligned_cols=52 Identities=13% Similarity=0.093 Sum_probs=32.4
Q ss_pred CeEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhCCC--CCCeeEEEecCCC
Q 034578 25 RSMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATAPT--HEGVSHVGGDMFD 77 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a~~--~~rv~~~~~d~~~ 77 (90)
+++|=.|++. .++.++++++ .+.++++.|. ++..+...+ ..++.++..|+.+
T Consensus 31 k~vlVTGas~-GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~ 87 (281)
T 3ppi_A 31 ASAIVSGGAG-GLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTS 87 (281)
T ss_dssp EEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTC
T ss_pred CEEEEECCCC-hHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCC
Confidence 4677666654 4555554443 3678899987 544433222 4678899999876
No 463
>3cb2_A Gamma-1-tubulin, tubulin gamma-1 chain; lattice, microtubule, nucleation, GTPase, lateral interaction, structural protein, hydrolase; HET: GDP; 2.30A {Homo sapiens} PDB: 1z5v_A* 1z5w_A*
Probab=60.67 E-value=14 Score=26.22 Aligned_cols=34 Identities=21% Similarity=0.442 Sum_probs=22.4
Q ss_pred CCCCCeEEEecCCchH-----HHHHHHHHCCCCeEEEee
Q 034578 21 FNNIRSMVDVGGGTGT-----VLAEIVKSYPHIKGINFD 54 (90)
Q Consensus 21 ~~~~~~vlDvG~G~G~-----~~~~l~~~~p~~~~~~~D 54 (90)
+.....+-.+|||||. ++..+...||+.....+-
T Consensus 132 lqgf~i~~slGGGTGSG~~s~l~e~l~dey~~k~~lt~~ 170 (475)
T 3cb2_A 132 LEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYS 170 (475)
T ss_dssp CCEEEEEEESSSSHHHHHHHHHHHHHHHHSTTSEEEEEE
T ss_pred cceeEEeccCCCCCCcChHHHHHHHHHHHcCCCceEEEE
Confidence 4456778999999974 455555668876544433
No 464
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=60.59 E-value=9.4 Score=26.45 Aligned_cols=31 Identities=19% Similarity=0.251 Sum_probs=24.9
Q ss_pred CeEEEecCCchHHHHHHHHHCCCCeEEEeeh
Q 034578 25 RSMVDVGGGTGTVLAEIVKSYPHIKGINFDL 55 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~ 55 (90)
..|+=||+|.+.+..+...+..+.+++.+|.
T Consensus 12 ~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~ 42 (479)
T 2hqm_A 12 YDYLVIGGGSGGVASARRAASYGAKTLLVEA 42 (479)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTSCCEEEEES
T ss_pred CCEEEEcCCHHHHHHHHHHHHCCCcEEEEeC
Confidence 4699999999887766655556889999994
No 465
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=60.51 E-value=10 Score=26.94 Aligned_cols=62 Identities=13% Similarity=0.101 Sum_probs=42.4
Q ss_pred CCeEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCCC-------CCcccEEEe
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATAPTHEGVSHVGGDMFDA-------IPNADAVFM 87 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~~-------~p~~D~i~l 87 (90)
..+++=+|+| .++..+++.. .+..++++|. |+.++.+++...+.++.||..++ +..+|.++.
T Consensus 127 ~~hviI~G~g--~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~ 198 (565)
T 4gx0_A 127 RGHILIFGID--PITRTLIRKLESRNHLFVVVTDNYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIA 198 (565)
T ss_dssp CSCEEEESCC--HHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSEEEE
T ss_pred CCeEEEECCC--hHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCEEEE
Confidence 3568777765 5666666654 3567999998 88777665543688999999872 223777765
No 466
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=60.40 E-value=13 Score=25.83 Aligned_cols=30 Identities=17% Similarity=0.023 Sum_probs=25.3
Q ss_pred eEEEecCCchHHHHHHHHHCCCCeEEEeeh
Q 034578 26 SMVDVGGGTGTVLAEIVKSYPHIKGINFDL 55 (90)
Q Consensus 26 ~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~ 55 (90)
.|+=||+|+|.++.+...+-.+.+++.+|.
T Consensus 10 DvvVIGgG~aGl~aA~~la~~G~~V~liE~ 39 (492)
T 3ic9_A 10 DVAIIGTGTAGMGAYRAAKKHTDKVVLIEG 39 (492)
T ss_dssp EEEEECCSHHHHHHHHHHHTTCSCEEEEES
T ss_pred CEEEECCCHHHHHHHHHHHhCCCcEEEEeC
Confidence 588899999998877766666889999995
No 467
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=60.24 E-value=6.7 Score=25.75 Aligned_cols=61 Identities=18% Similarity=0.153 Sum_probs=33.9
Q ss_pred eEEEecCCc-hHHHHHHHHHCCCCeEE-Eeeh-HHHHHhCCCCCCeeEEEecCCCC--CCcccEEEee
Q 034578 26 SMVDVGGGT-GTVLAEIVKSYPHIKGI-NFDL-QHVIATAPTHEGVSHVGGDMFDA--IPNADAVFMK 88 (90)
Q Consensus 26 ~vlDvG~G~-G~~~~~l~~~~p~~~~~-~~D~-p~~~~~a~~~~rv~~~~~d~~~~--~p~~D~i~l~ 88 (90)
+|.=||||. |........+.|+.+++ +.|. ++..+...+.-.+. ..|+.+- -++.|+|++.
T Consensus 5 ~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~D~V~i~ 70 (331)
T 4hkt_A 5 RFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE--VRTIDAIEAAADIDAVVIC 70 (331)
T ss_dssp EEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE--ECCHHHHHHCTTCCEEEEC
T ss_pred EEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC--cCCHHHHhcCCCCCEEEEe
Confidence 577789975 55444455567888877 4787 55444322222233 2333331 2357888764
No 468
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=60.22 E-value=8.8 Score=23.87 Aligned_cols=52 Identities=8% Similarity=0.040 Sum_probs=31.3
Q ss_pred CeEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhCCC--CCCeeEEEecCCC
Q 034578 25 RSMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATAPT--HEGVSHVGGDMFD 77 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a~~--~~rv~~~~~d~~~ 77 (90)
+++|=.|++ |.++.++++++ .+.++++.+. ++.++...+ ..++.++..|+.+
T Consensus 4 k~vlVTGas-~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~ 60 (235)
T 3l6e_A 4 GHIIVTGAG-SGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAH 60 (235)
T ss_dssp CEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTS
T ss_pred CEEEEECCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCC
Confidence 456666654 44555555443 3678888887 544433221 2368888889876
No 469
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=60.20 E-value=8.2 Score=25.18 Aligned_cols=49 Identities=18% Similarity=0.138 Sum_probs=33.2
Q ss_pred eEEEecCCchHHHHHHHHHCC--C-----CeEEEeeh-HHHHHhCCCCCCeeEEEecCCC
Q 034578 26 SMVDVGGGTGTVLAEIVKSYP--H-----IKGINFDL-QHVIATAPTHEGVSHVGGDMFD 77 (90)
Q Consensus 26 ~vlDvG~G~G~~~~~l~~~~p--~-----~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~ 77 (90)
+||=. ||+|.++..++++.- + .++++++. +.-.. ....+++++.+|+.+
T Consensus 3 ~vlVt-GatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--~~~~~~~~~~~Dl~d 59 (364)
T 2v6g_A 3 VALIV-GVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--HEDNPINYVQCDISD 59 (364)
T ss_dssp EEEEE-TTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--CCSSCCEEEECCTTS
T ss_pred EEEEE-CCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--cccCceEEEEeecCC
Confidence 45544 568999999988763 3 67888886 32211 123578999999876
No 470
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=60.14 E-value=14 Score=25.36 Aligned_cols=32 Identities=9% Similarity=0.050 Sum_probs=25.1
Q ss_pred CCeEEEecCCchHHHHHHHHHCCCCeEEEeeh
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSYPHIKGINFDL 55 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~ 55 (90)
...|+=||+|.+.++.+...+..+.+++.+|.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~ 35 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIER 35 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 35799999999887766655545789999995
No 471
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=60.07 E-value=25 Score=22.06 Aligned_cols=56 Identities=11% Similarity=0.143 Sum_probs=37.6
Q ss_pred CeEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhCCCCCCeeEEEecCCCC--CC----c-ccEEEe
Q 034578 25 RSMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATAPTHEGVSHVGGDMFDA--IP----N-ADAVFM 87 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a~~~~rv~~~~~d~~~~--~p----~-~D~i~l 87 (90)
.+||=.| . |.++..++++. .+.++++++. +.- ...+++++.+|+.++ +. . +|+|+-
T Consensus 4 ~~ilVtG-a-G~iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih 69 (286)
T 3gpi_A 4 SKILIAG-C-GDLGLELARRLTAQGHEVTGLRRSAQP-----MPAGVQTLIADVTRPDTLASIVHLRPEILVY 69 (286)
T ss_dssp CCEEEEC-C-SHHHHHHHHHHHHTTCCEEEEECTTSC-----CCTTCCEEECCTTCGGGCTTGGGGCCSEEEE
T ss_pred CcEEEEC-C-CHHHHHHHHHHHHCCCEEEEEeCCccc-----cccCCceEEccCCChHHHHHhhcCCCCEEEE
Confidence 4688787 3 88887777664 3567888886 321 246789999999872 32 2 677763
No 472
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=60.00 E-value=11 Score=24.31 Aligned_cols=31 Identities=16% Similarity=0.121 Sum_probs=23.4
Q ss_pred CeEEEecCCchHHHHHHHHHCCCCeEEEeeh
Q 034578 25 RSMVDVGGGTGTVLAEIVKSYPHIKGINFDL 55 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~ 55 (90)
..|+=||+|.+.++.+...+..+.+++.+|.
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~ 36 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGMRGLSFRFVDP 36 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeC
Confidence 4689999998887766554445778999985
No 473
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=59.99 E-value=9.7 Score=24.39 Aligned_cols=30 Identities=20% Similarity=0.201 Sum_probs=21.7
Q ss_pred eEEEecCCchHHHHHHHHHCCCCeEEEeeh
Q 034578 26 SMVDVGGGTGTVLAEIVKSYPHIKGINFDL 55 (90)
Q Consensus 26 ~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~ 55 (90)
-|+=||+|++-++.++..+.-+.+++.+|.
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~v~lie~ 37 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQIALFDN 37 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeC
Confidence 388899999888766543334678888883
No 474
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=59.85 E-value=11 Score=25.77 Aligned_cols=32 Identities=19% Similarity=0.092 Sum_probs=23.8
Q ss_pred CCeEEEecCCchHHHHHHHHHC---CCCeEEEeeh
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSY---PHIKGINFDL 55 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~---p~~~~~~~D~ 55 (90)
..+|+=||+|.+.+..+..-+. ++.+++.+|.
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~ 38 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISA 38 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECS
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeC
Confidence 4689999999887655444333 7889999984
No 475
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=59.82 E-value=9.2 Score=25.01 Aligned_cols=31 Identities=19% Similarity=0.305 Sum_probs=24.2
Q ss_pred CeEEEecCCchHHHHHHHHHCCCCeEEEeeh
Q 034578 25 RSMVDVGGGTGTVLAEIVKSYPHIKGINFDL 55 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~ 55 (90)
..|+=||+|.+.++.++..+..+.+++.+|.
T Consensus 15 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~ 45 (360)
T 3ab1_A 15 RDLTIIGGGPTGIFAAFQCGMNNISCRIIES 45 (360)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEec
Confidence 4799999999887776655545788999885
No 476
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=59.79 E-value=11 Score=25.54 Aligned_cols=31 Identities=23% Similarity=0.361 Sum_probs=23.2
Q ss_pred CeEEEecCCchHHHHHHHHH--CCCCeEEEeeh
Q 034578 25 RSMVDVGGGTGTVLAEIVKS--YPHIKGINFDL 55 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~--~p~~~~~~~D~ 55 (90)
.+|+=||+|.+.+..+..-+ .++.+++.+|.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~ 35 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISD 35 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECS
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECC
Confidence 47899999988765544333 37899999995
No 477
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=59.52 E-value=12 Score=22.90 Aligned_cols=53 Identities=15% Similarity=0.090 Sum_probs=32.0
Q ss_pred CCeEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhC-CCCCCeeEEEecCCC
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATA-PTHEGVSHVGGDMFD 77 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a-~~~~rv~~~~~d~~~ 77 (90)
..++|=.|+ +|.++.++++++ .+.++++++. ++..+.. ++..+++++.+|+.+
T Consensus 7 ~~~vlVTGa-sggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~ 63 (244)
T 1cyd_A 7 GLRALVTGA-GKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGD 63 (244)
T ss_dssp TCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTC
T ss_pred CCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCC
Confidence 356666654 666666666553 4678888887 4433221 122456777888876
No 478
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=59.52 E-value=11 Score=23.53 Aligned_cols=31 Identities=13% Similarity=0.118 Sum_probs=22.9
Q ss_pred CeEEEecCCchHHHHHHHHHCCCCeEEEeeh
Q 034578 25 RSMVDVGGGTGTVLAEIVKSYPHIKGINFDL 55 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~ 55 (90)
..|+=||+|.+.+..+...+..+.+++.+|.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~ 33 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDA 33 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeC
Confidence 3688999998886666554444678999983
No 479
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=59.48 E-value=19 Score=22.63 Aligned_cols=54 Identities=7% Similarity=0.014 Sum_probs=34.2
Q ss_pred CCeEEEecC-CchHHHHHHHHHC--CCCeEEEeeh-HH-HHHhC-CC-CCCeeEEEecCCC
Q 034578 24 IRSMVDVGG-GTGTVLAEIVKSY--PHIKGINFDL-QH-VIATA-PT-HEGVSHVGGDMFD 77 (90)
Q Consensus 24 ~~~vlDvG~-G~G~~~~~l~~~~--p~~~~~~~D~-p~-~~~~a-~~-~~rv~~~~~d~~~ 77 (90)
.+++|=.|+ |+|.++.++++++ .+.++++.+. +. ..+.. ++ ..++.++..|+.+
T Consensus 7 ~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~ 67 (269)
T 2h7i_A 7 GKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQN 67 (269)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTC
T ss_pred CCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCC
Confidence 467888887 3666666666554 3678888886 32 22222 22 3467888889876
No 480
>3sgw_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, valley fever; 1.70A {Coccidioides immitis} PDB: 3sdw_A 3qd5_A*
Probab=59.47 E-value=6.7 Score=24.53 Aligned_cols=47 Identities=19% Similarity=0.137 Sum_probs=28.8
Q ss_pred EecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCCC--CCeeEEEecC
Q 034578 29 DVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPTH--EGVSHVGGDM 75 (90)
Q Consensus 29 DvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~~--~rv~~~~~d~ 75 (90)
=+-||||.=..-.+.++|++++...--+...+.+++. .++-.+.+.+
T Consensus 94 IliCGTGiG~sIaANKv~GIRAAlc~d~~sA~laR~HNnANVL~lG~Rv 142 (184)
T 3sgw_A 94 LMICGTGLGVAISANKVPGIRAVTAHDTFSVERAILSNDAQVLCFGQRV 142 (184)
T ss_dssp EEEESSSHHHHHHHHTSTTCCEEECCSHHHHHHHHHTTCCSEEEEETTT
T ss_pred EEEcCCcHHHhhhhhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEchhh
Confidence 3556777655556677899986555447766777663 4444444433
No 481
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=59.43 E-value=24 Score=22.05 Aligned_cols=52 Identities=12% Similarity=0.124 Sum_probs=32.1
Q ss_pred CCeEEEecCCchH---HHHHHHHHCCCCeEEEeeh-HHHHHhCCC-------C-CCeeEEEecCCC
Q 034578 24 IRSMVDVGGGTGT---VLAEIVKSYPHIKGINFDL-QHVIATAPT-------H-EGVSHVGGDMFD 77 (90)
Q Consensus 24 ~~~vlDvG~G~G~---~~~~l~~~~p~~~~~~~D~-p~~~~~a~~-------~-~rv~~~~~d~~~ 77 (90)
.+++|=.|++.|. ++..|+++ +.++++++. ++..+...+ . .++.++..|+.+
T Consensus 7 ~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 70 (250)
T 3nyw_A 7 KGLAIITGASQGIGAVIAAGLATD--GYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITD 70 (250)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHH--TCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCC
Confidence 4567777765543 44455554 578888887 543332211 2 678889999876
No 482
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=59.34 E-value=15 Score=23.89 Aligned_cols=50 Identities=16% Similarity=0.262 Sum_probs=30.4
Q ss_pred EEEecCCchHHHHHHHHHC---CCCeEEEeeh-H--HHHHhC---CCCCCeeEEEecCCC
Q 034578 27 MVDVGGGTGTVLAEIVKSY---PHIKGINFDL-Q--HVIATA---PTHEGVSHVGGDMFD 77 (90)
Q Consensus 27 vlDvG~G~G~~~~~l~~~~---p~~~~~~~D~-p--~~~~~a---~~~~rv~~~~~d~~~ 77 (90)
||=.| |+|.++..++++. ++.++++++. + ...+.. ....+++++.+|+.+
T Consensus 3 vlVTG-asG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d 61 (361)
T 1kew_A 3 ILITG-GAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICD 61 (361)
T ss_dssp EEEES-TTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTC
T ss_pred EEEEC-CCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCC
Confidence 44444 5677776666553 3578888885 3 111111 123579999999986
No 483
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=59.30 E-value=10 Score=26.15 Aligned_cols=31 Identities=13% Similarity=0.190 Sum_probs=24.9
Q ss_pred CeEEEecCCchHHHHHHHHHCCCCeEEEeeh
Q 034578 25 RSMVDVGGGTGTVLAEIVKSYPHIKGINFDL 55 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~ 55 (90)
..|+=||+|.+.+..+...+..+.+++.+|.
T Consensus 5 ~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~ 35 (463)
T 2r9z_A 5 FDLIAIGGGSGGLAVAEKAAAFGKRVALIES 35 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEcC
Confidence 4689999999987776655557889999994
No 484
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=58.87 E-value=29 Score=22.41 Aligned_cols=64 Identities=13% Similarity=0.099 Sum_probs=34.3
Q ss_pred CCCeEEEecCC-chHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCCCCeeEEE-ecCCCCCCcccEEEee
Q 034578 23 NIRSMVDVGGG-TGTVLAEIVKSYPHIKGINFDL-QHVIATAPTHEGVSHVG-GDMFDAIPNADAVFMK 88 (90)
Q Consensus 23 ~~~~vlDvG~G-~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~~rv~~~~-~d~~~~~p~~D~i~l~ 88 (90)
...+++=+|+| .|......++.+ +.+++++|. +...+.+++. .++.+. .++.+-+..+|+|++.
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~dr~~~~~~~~~~~-g~~~~~~~~l~~~l~~aDvVi~~ 220 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAAL-GAKVKVGARESDLLARIAEM-GMEPFHISKAAQELRDVDVCINT 220 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT-TSEEEEGGGHHHHTTTCSEEEEC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHC-CCeecChhhHHHHhcCCCEEEEC
Confidence 45789999976 344444444444 458999997 5544332221 123322 1221224558888764
No 485
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=58.79 E-value=27 Score=22.78 Aligned_cols=42 Identities=14% Similarity=0.097 Sum_probs=31.8
Q ss_pred CCCCCeEEEec--CCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCC
Q 034578 21 FNNIRSMVDVG--GGTGTVLAEIVKSYPHIKGINFDL-QHVIATAP 63 (90)
Q Consensus 21 ~~~~~~vlDvG--~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~ 63 (90)
+....++|-.| +|.|..+..+++.. +.++++.|. ++-.+.++
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~ 187 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHL-GATVIGTVSTEEKAETAR 187 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHH
Confidence 55668999999 57888999988876 469999997 65554443
No 486
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=58.69 E-value=30 Score=22.99 Aligned_cols=47 Identities=9% Similarity=0.138 Sum_probs=26.9
Q ss_pred hhHHHHHhhcccCCCCCC-CeEEEecCCchH--HHHHHHHHCCCCeEEEeeh
Q 034578 7 ITMKAFVSHYKVDGFNNI-RSMVDVGGGTGT--VLAEIVKSYPHIKGINFDL 55 (90)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~-~~vlDvG~G~G~--~~~~l~~~~p~~~~~~~D~ 55 (90)
..+..|++.+++ .... .-|+-+|+|.-. ++..+....|..++++++.
T Consensus 185 t~~~EI~~q~~~--~~~~d~vv~~vGtGGt~aGi~~~~k~~~~~~~vigVe~ 234 (342)
T 4d9b_A 185 ESALEIAQQCEE--VVGLSSVVVASGSAGTHAGLAVGLEHLMPDVELIGVTV 234 (342)
T ss_dssp HHHHHHHHHHTT--TCCCCEEEEEESSSHHHHHHHHHHHHHCTTSEEEEEES
T ss_pred HHHHHHHHHHhc--cCCCCEEEEeCCCCHHHHHHHHHHHhhCCCCeEEEEEe
Confidence 455667777652 1122 234444444322 3445556689999999994
No 487
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=58.46 E-value=9.2 Score=23.03 Aligned_cols=48 Identities=13% Similarity=0.072 Sum_probs=30.9
Q ss_pred EEEecCCchHHHHHHHHHCCCCeEEEeehHHHHHhCCC--CCCeeEEEec
Q 034578 27 MVDVGGGTGTVLAEIVKSYPHIKGINFDLQHVIATAPT--HEGVSHVGGD 74 (90)
Q Consensus 27 vlDvG~G~G~~~~~l~~~~p~~~~~~~D~p~~~~~a~~--~~rv~~~~~d 74 (90)
.-=+.||||.=..-.+.++|++++...--|...+.+++ +.++-.+.+.
T Consensus 61 ~GIliCGTGiG~siaANKv~GIRAal~~d~~sA~~ar~hNnaNVl~lG~r 110 (149)
T 2vvr_A 61 GGILICGTGVGISIAANKFAGIRAVVCSEPYSAQLSRQNNDTNVLAFGSR 110 (149)
T ss_dssp EEEEEESSSHHHHHHHHTSTTCCEEECSSHHHHHHHHHHHCCCEEEEETT
T ss_pred eEEEEeCCcHHHHHHHhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEECcc
Confidence 34456788876666677799998765544777777776 3444444443
No 488
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=58.45 E-value=18 Score=23.63 Aligned_cols=43 Identities=19% Similarity=0.119 Sum_probs=32.4
Q ss_pred CCCCCeEEEec--CCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 21 FNNIRSMVDVG--GGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 21 ~~~~~~vlDvG--~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
..+..+||-.| +|.|..+..+++.. ++++++.+. ++-.+.+++
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~ 183 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKAL-GAKLIGTVSSPEKAAHAKA 183 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH
Confidence 55678999998 46788898888875 569999997 665555543
No 489
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=58.39 E-value=15 Score=23.82 Aligned_cols=64 Identities=13% Similarity=0.106 Sum_probs=34.2
Q ss_pred CCCeEEEecCC-chHHHHHHHHHCCCCeEEEeeh-HHHHHhCCCCCCeeEEE-ecCCCCCCcccEEEee
Q 034578 23 NIRSMVDVGGG-TGTVLAEIVKSYPHIKGINFDL-QHVIATAPTHEGVSHVG-GDMFDAIPNADAVFMK 88 (90)
Q Consensus 23 ~~~~vlDvG~G-~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~~~rv~~~~-~d~~~~~p~~D~i~l~ 88 (90)
...+++=+|+| .|......++.+ +.+++++|. ++..+.+.+. .++.+. .++.+-+..+|+|+..
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~d~~~~~~~~~~~~-g~~~~~~~~l~~~l~~aDvVi~~ 222 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAAL-GANVKVGARSSAHLARITEM-GLVPFHTDELKEHVKDIDICINT 222 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT-TCEEEEGGGHHHHSTTCSEEEEC
T ss_pred CCCEEEEEcccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHC-CCeEEchhhHHHHhhCCCEEEEC
Confidence 45789999986 344444444445 468999997 5543322211 122221 1221224458888764
No 490
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=58.29 E-value=13 Score=25.95 Aligned_cols=31 Identities=13% Similarity=0.217 Sum_probs=26.2
Q ss_pred CeEEEecCCchHHHHHHHHHCCCCeEEEeeh
Q 034578 25 RSMVDVGGGTGTVLAEIVKSYPHIKGINFDL 55 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~ 55 (90)
..|+=||+|.+.++.++..+..+.+++++|.
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~ 38 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLER 38 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEcc
Confidence 4699999999888877777767889999996
No 491
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=58.24 E-value=15 Score=22.52 Aligned_cols=53 Identities=9% Similarity=-0.039 Sum_probs=32.4
Q ss_pred CCeEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhCC------CCCCeeEEEecCCC
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATAP------THEGVSHVGGDMFD 77 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a~------~~~rv~~~~~d~~~ 77 (90)
.+++|=.|+ +|.++.++++++ .+.++++++. ++..+... ...++.++.+|+.+
T Consensus 7 ~~~vlVtGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 68 (248)
T 2pnf_A 7 GKVSLVTGS-TRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLS 68 (248)
T ss_dssp TCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTC
T ss_pred CCEEEEECC-CchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCC
Confidence 345665554 666666666553 3578888887 44333211 13568888899876
No 492
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=58.17 E-value=31 Score=22.51 Aligned_cols=44 Identities=14% Similarity=0.176 Sum_probs=32.9
Q ss_pred CCCCCeEEEecCC-chHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 21 FNNIRSMVDVGGG-TGTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 21 ~~~~~~vlDvG~G-~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
..+..+|+=.|+| .|.++..+++..-...+++.|. ++-.+.+++
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~ 203 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKS 203 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHH
Confidence 4566888888886 4668888888876667788997 766666655
No 493
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=58.15 E-value=15 Score=25.17 Aligned_cols=31 Identities=19% Similarity=0.175 Sum_probs=25.7
Q ss_pred CeEEEecCCchHHHHHHHHHCCCCeEEEeeh
Q 034578 25 RSMVDVGGGTGTVLAEIVKSYPHIKGINFDL 55 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~ 55 (90)
-.|+=||+|.+.++.++..+--+.+++.+|.
T Consensus 6 ~DVvVIGaG~aGl~aA~~la~~G~~V~liEk 36 (463)
T 4dna_A 6 YDLFVIGGGSGGVRSGRLAAALGKKVAIAEE 36 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEEES
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCEEEEEeC
Confidence 3588999999998887777666889999994
No 494
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=58.14 E-value=27 Score=22.26 Aligned_cols=53 Identities=17% Similarity=0.001 Sum_probs=33.9
Q ss_pred CCeEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHhCCC--CCCeeEEEecCCC
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIATAPT--HEGVSHVGGDMFD 77 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~a~~--~~rv~~~~~d~~~ 77 (90)
.+++|=.|+ +|.++.++++++ .+.++++.+. +...+.+.+ ..++.++..|+.+
T Consensus 16 gk~vlVTGa-s~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d 73 (291)
T 3rd5_A 16 QRTVVITGA-NSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQD 73 (291)
T ss_dssp TCEEEEECC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTC
T ss_pred CCEEEEeCC-CChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCC
Confidence 356666665 455555555543 3678999997 554443322 4678999999876
No 495
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=58.05 E-value=18 Score=24.86 Aligned_cols=31 Identities=16% Similarity=0.093 Sum_probs=25.0
Q ss_pred CeEEEecCCchHHHH--HHHHHCCCCeEEEeeh
Q 034578 25 RSMVDVGGGTGTVLA--EIVKSYPHIKGINFDL 55 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~--~l~~~~p~~~~~~~D~ 55 (90)
.+|+=||+|.+.++. .|+++.|+.+++.+|.
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~ 36 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQ 36 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECC
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEEC
Confidence 579999999887554 4566678999999996
No 496
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=57.93 E-value=11 Score=23.36 Aligned_cols=53 Identities=17% Similarity=0.083 Sum_probs=32.9
Q ss_pred CCeEEEecCCchHHHHHHHHHC--CCCeEEEeeh-HHHHHh----CCCCCCeeEEEecCCC
Q 034578 24 IRSMVDVGGGTGTVLAEIVKSY--PHIKGINFDL-QHVIAT----APTHEGVSHVGGDMFD 77 (90)
Q Consensus 24 ~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-p~~~~~----a~~~~rv~~~~~d~~~ 77 (90)
.+++|=.|+ +|.++.++++++ .+.++++++. ++..+. .+...++.++.+|+.+
T Consensus 6 ~k~vlVtGa-sggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~ 65 (251)
T 1zk4_A 6 GKVAIITGG-TLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSD 65 (251)
T ss_dssp TCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC
T ss_pred CcEEEEeCC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCC
Confidence 356665555 566666665553 3578888887 443322 1223678999999876
No 497
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=57.89 E-value=21 Score=23.30 Aligned_cols=43 Identities=16% Similarity=0.220 Sum_probs=33.1
Q ss_pred CCCCCeEEEec--CCchHHHHHHHHHCCCCeEEEeeh-HHHHHhCCC
Q 034578 21 FNNIRSMVDVG--GGTGTVLAEIVKSYPHIKGINFDL-QHVIATAPT 64 (90)
Q Consensus 21 ~~~~~~vlDvG--~G~G~~~~~l~~~~p~~~~~~~D~-p~~~~~a~~ 64 (90)
..+..+||-.| +|.|..+..+++.. ++++++.+. ++-.+.+++
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~ 191 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMK-GAHTIAVASTDEKLKIAKE 191 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH
Confidence 55678999999 46788899998876 569999998 766665554
No 498
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=57.86 E-value=15 Score=25.07 Aligned_cols=31 Identities=19% Similarity=0.204 Sum_probs=24.5
Q ss_pred CeEEEecCCchHHH--HHHHHHCCCCeEEEeeh
Q 034578 25 RSMVDVGGGTGTVL--AEIVKSYPHIKGINFDL 55 (90)
Q Consensus 25 ~~vlDvG~G~G~~~--~~l~~~~p~~~~~~~D~ 55 (90)
.+|+=||+|.+.++ ..++++.|+.+++.+|.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~ 35 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDK 35 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEEC
Confidence 36899999988754 45566678999999995
No 499
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=57.76 E-value=13 Score=25.87 Aligned_cols=62 Identities=15% Similarity=0.123 Sum_probs=40.2
Q ss_pred CeEEEecCCchHHHHHHHHHCC--CCeEEEeeh-HH---HHHhC--------------CCCCCeeEEEecCCC-C-CC--
Q 034578 25 RSMVDVGGGTGTVLAEIVKSYP--HIKGINFDL-QH---VIATA--------------PTHEGVSHVGGDMFD-A-IP-- 80 (90)
Q Consensus 25 ~~vlDvG~G~G~~~~~l~~~~p--~~~~~~~D~-p~---~~~~a--------------~~~~rv~~~~~d~~~-~-~p-- 80 (90)
.+||=. ||+|.++..++++.- ..++++++. +. ..+.. ...++++++.+|+.+ + +.
T Consensus 151 ~~VLVT-GatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~ 229 (508)
T 4f6l_B 151 GNTLLT-GATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVVLP 229 (508)
T ss_dssp EEEEES-CTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCCCS
T ss_pred CeEEEE-CCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCCCc
Confidence 456654 569999999999873 346788886 33 11110 113689999999987 2 22
Q ss_pred -cccEEEe
Q 034578 81 -NADAVFM 87 (90)
Q Consensus 81 -~~D~i~l 87 (90)
.+|+|+-
T Consensus 230 ~~~D~Vih 237 (508)
T 4f6l_B 230 ENMDTIIH 237 (508)
T ss_dssp SCCSEEEE
T ss_pred cCCCEEEE
Confidence 3687763
No 500
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=57.64 E-value=4.4 Score=26.60 Aligned_cols=62 Identities=21% Similarity=0.297 Sum_probs=31.6
Q ss_pred eEEEecCCc-hH-HHHHHHHHCCCCeEEEeeh-HHHHHhC-CCCCCeeEEEecCCCCC-CcccEEEee
Q 034578 26 SMVDVGGGT-GT-VLAEIVKSYPHIKGINFDL-QHVIATA-PTHEGVSHVGGDMFDAI-PNADAVFMK 88 (90)
Q Consensus 26 ~vlDvG~G~-G~-~~~~l~~~~p~~~~~~~D~-p~~~~~a-~~~~rv~~~~~d~~~~~-p~~D~i~l~ 88 (90)
+|.=||||. |. .....+.+.|+.++++.|. ++..+.. ++.+ +.....|..+.+ +..|+|++.
T Consensus 4 ~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~g-~~~~~~~~~~~l~~~~D~V~i~ 70 (323)
T 1xea_A 4 KIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYR-VSATCTDYRDVLQYGVDAVMIH 70 (323)
T ss_dssp EEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTT-CCCCCSSTTGGGGGCCSEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHcC-CCccccCHHHHhhcCCCEEEEE
Confidence 567788874 33 1223334467778778887 6544332 2211 111112333334 447888764
Done!