BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034598
(90 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P33080|AX10A_SOYBN Auxin-induced protein X10A OS=Glycine max PE=2 SV=1
Length = 92
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 66/88 (75%), Gaps = 2/88 (2%)
Query: 1 MGIRLPAMIHNAKQILKLHSKDQSGVPKGHVVVYVGELQKTRFVVPISYLNHPSFIDLLN 60
MG RLP + + + SK VPKG++VVYVG+ + RF++P+SYLN PSF DLLN
Sbjct: 1 MGFRLPGIRKTSIAANQASSKSVE-VPKGYLVVYVGDKMR-RFLIPVSYLNQPSFQDLLN 58
Query: 61 RAEEEFGFNHPMGGLTIPCREDAFINIT 88
+AEEEFG++HPMGGLTIPC+ED F+ +T
Sbjct: 59 QAEEEFGYDHPMGGLTIPCKEDEFLTVT 86
>sp|P33081|AX15A_SOYBN Auxin-induced protein 15A OS=Glycine max PE=2 SV=1
Length = 82
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 61/88 (69%), Gaps = 10/88 (11%)
Query: 1 MGIRLPAMIHNAKQILKLHSKDQSGVPKGHVVVYVGELQKTRFVVPISYLNHPSFIDLLN 60
MG RLP + +K + PKG++ VYVGE K RFV+P+SYLN PSF DLL+
Sbjct: 1 MGFRLPGIRKASKA---------ADAPKGYLAVYVGEKLK-RFVIPVSYLNQPSFQDLLS 50
Query: 61 RAEEEFGFNHPMGGLTIPCREDAFINIT 88
+AEEEFG++HPMGGLTIPC ED F IT
Sbjct: 51 QAEEEFGYDHPMGGLTIPCSEDVFQCIT 78
>sp|P33079|A10A5_SOYBN Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1
Length = 93
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Query: 1 MGIRLPAMIHNAKQILKLHSKDQSGVPKGHVVVYVGELQKTRFVVPISYLNHPSFIDLLN 60
MG R+ ++ + + VPKG+ VYVG+ + RF +P+SYLN PSF +LL+
Sbjct: 1 MGFRIAGIVRRTSFYTTQAASKRVDVPKGYAAVYVGDKMR-RFTIPVSYLNEPSFQELLS 59
Query: 61 RAEEEFGFNHPMGGLTIPCREDAFINIT 88
+AEEEFG++HPMGGLTIPC+E+ F+N+T
Sbjct: 60 QAEEEFGYDHPMGGLTIPCKEEEFLNVT 87
>sp|P33082|AXX15_SOYBN Auxin-induced protein X15 OS=Glycine max PE=2 SV=1
Length = 82
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 59/88 (67%), Gaps = 10/88 (11%)
Query: 1 MGIRLPAMIHNAKQILKLHSKDQSGVPKGHVVVYVGELQKTRFVVPISYLNHPSFIDLLN 60
MG RLP + + + PKG++ VYVGE K RFV+P+SY+N PSF DLL
Sbjct: 1 MGFRLPGIRKASNAV---------DAPKGYLAVYVGEKMK-RFVIPVSYMNQPSFQDLLT 50
Query: 61 RAEEEFGFNHPMGGLTIPCREDAFINIT 88
+AEEEFG++HPMGGLTIPC E+ F IT
Sbjct: 51 QAEEEFGYDHPMGGLTIPCSEEVFQRIT 78
>sp|P32295|ARG7_VIGRR Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var.
radiata GN=ARG7 PE=2 SV=1
Length = 92
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 65/91 (71%), Gaps = 8/91 (8%)
Query: 1 MGIRLPAMIHNAKQILKLHSKDQSGV---PKGHVVVYVGELQKTRFVVPISYLNHPSFID 57
MG RLP + ++ L ++ S V PKG++ VYVGE K RFV+P+S+LN P F D
Sbjct: 1 MGFRLPGI----RKTLSARNEASSKVLDAPKGYLAVYVGENMK-RFVIPVSHLNQPLFQD 55
Query: 58 LLNRAEEEFGFNHPMGGLTIPCREDAFINIT 88
LL++AEEEFG++HPMGGLTIPC ED F +IT
Sbjct: 56 LLSQAEEEFGYDHPMGGLTIPCSEDLFQHIT 86
>sp|P33083|AX6B_SOYBN Auxin-induced protein 6B OS=Glycine max PE=2 SV=1
Length = 90
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 60/88 (68%), Gaps = 2/88 (2%)
Query: 1 MGIRLPAMIHNAKQILKLHSKDQSGVPKGHVVVYVGELQKTRFVVPISYLNHPSFIDLLN 60
MG RLP I A S V KG++ VYVGE + RFV+P+SYLN PSF DLL+
Sbjct: 1 MGFRLPG-IRKASFSANQASSKAVDVEKGYLAVYVGEKMR-RFVIPVSYLNKPSFQDLLS 58
Query: 61 RAEEEFGFNHPMGGLTIPCREDAFINIT 88
+AEEEFG++HP GGLTIPC ED F +IT
Sbjct: 59 QAEEEFGYHHPNGGLTIPCSEDVFQHIT 86
>sp|Q6BLU9|PRP28_DEBHA Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=PRP28 PE=3 SV=2
Length = 580
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 1 MGIRLPAMIHNAKQILKLHSKDQSGVPKGHVVVYVGELQKTRFVVPI-SYLNHPSFIDLL 59
+G P I A L L+ +D G+ + G + F++P+ SY+ LL
Sbjct: 173 LGYDSPTPIQRASIPLALNGRDIVGIAE------TGSGKTLAFLLPLFSYILSVDSNYLL 226
Query: 60 NRAEEEFGFNHPMGGLTIPCREDAF 84
++E FN P+G + P RE A
Sbjct: 227 YEHQQESNFNKPLGLILAPTRELAL 251
>sp|A3DM48|PYRB_STAMF Aspartate carbamoyltransferase OS=Staphylothermus marinus (strain
ATCC 43588 / DSM 3639 / F1) GN=pyrB PE=3 SV=1
Length = 311
Score = 29.6 bits (65), Expect = 6.4, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 32 VVYVGELQKTRFVVPISYLNHPSF----IDLLNRAEEEFGFNHPM 72
V+YV +QK R+ PI Y + ID L ++EF HP+
Sbjct: 225 VLYVTRIQKERYPDPIEYERVKNLYRISIDTLRNVKKEFRILHPL 269
>sp|Q8GXG6|B3GTH_ARATH Probable beta-1,3-galactosyltransferase 17 OS=Arabidopsis thaliana
GN=B3GALT17 PE=2 SV=2
Length = 673
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
Query: 12 AKQILKLHSKDQSGVPKGHVVVYVGELQKTRFVVPISYLNHPSFIDLLNRAEEEFGFNHP 71
A+ + LH++ + V Y G+ +V + Y++H + L A E+G N
Sbjct: 461 ARFFVALHARKEVNVDLKKEAEYFGD------IVIVPYMDHYDLVVLKTVAICEYGVNTV 514
Query: 72 MGGLTIPCREDAFINI 87
+ C +D F+ +
Sbjct: 515 AAKYVMKCDDDTFVRV 530
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.142 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,227,278
Number of Sequences: 539616
Number of extensions: 1343715
Number of successful extensions: 2268
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2256
Number of HSP's gapped (non-prelim): 9
length of query: 90
length of database: 191,569,459
effective HSP length: 60
effective length of query: 30
effective length of database: 159,192,499
effective search space: 4775774970
effective search space used: 4775774970
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)