Your job contains 1 sequence.
>034609
MGASRGPRLSGLQKQVLSLYRGFLRAARCKSAADRRQIESIVSAEFRRNSNQVDRKNFLY
IEYLLRRGKKQLEQLQSPNTESLSQTKQS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 034609
(89 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:505006309 - symbol:AT2G39725 "AT2G39725" speci... 278 2.6e-24 1
UNIPROTKB|G4MQR1 - symbol:MGG_11728 "Uncharacterized prot... 168 1.2e-12 1
ASPGD|ASPL0000032293 - symbol:AN10717 species:162425 "Eme... 162 5.0e-12 1
RGD|1559845 - symbol:RGD1559845 "similar to SPBPJ4664.02"... 148 1.5e-10 1
RGD|1562079 - symbol:Sdhaf1 "succinate dehydrogenase comp... 148 1.5e-10 1
UNIPROTKB|A6NFY7 - symbol:SDHAF1 "Succinate dehydrogenase... 141 8.4e-10 1
DICTYBASE|DDB_G0289475 - symbol:sdhaf1A "putative mitocho... 139 1.4e-09 1
UNIPROTKB|A8PU71 - symbol:SDHAF1 "Succinate dehydrogenase... 139 1.4e-09 1
POMBASE|SPAC664.12c - symbol:SPAC664.12c "mitochondrial s... 138 1.8e-09 1
UNIPROTKB|F1RLD9 - symbol:SDHAF1 "Uncharacterized protein... 137 2.2e-09 1
ZFIN|ZDB-GENE-050809-56 - symbol:sdhaf1 "succinate dehydr... 135 3.6e-09 1
MGI|MGI:1915582 - symbol:Sdhaf1 "succinate dehydrogenase ... 134 4.7e-09 1
SGD|S000007605 - symbol:YDR379C-A "Protein involved in as... 125 4.2e-08 1
UNIPROTKB|E1C4T4 - symbol:LYRM2 "Uncharacterized protein"... 98 3.0e-05 1
DICTYBASE|DDB_G0270818 - symbol:sdhaf1B "putative mitocho... 93 0.00010 1
UNIPROTKB|F1S0C3 - symbol:LYRM2 "Uncharacterized protein"... 89 0.00027 1
MGI|MGI:1917573 - symbol:Lyrm2 "LYR motif containing 2" s... 89 0.00027 1
RGD|1597334 - symbol:Lyrm2 "LYR motif containing 2" speci... 86 0.00057 1
>TAIR|locus:505006309 [details] [associations]
symbol:AT2G39725 "AT2G39725" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0006626 "protein
targeting to mitochondrion" evidence=RCA] Pfam:PF05347
EMBL:CP002685 GenomeReviews:CT485783_GR InterPro:IPR008011
Pfam:PF13232 EMBL:AC003000 HOGENOM:HOG000235089 eggNOG:NOG287452
OMA:HLLRVGN EMBL:AY063838 EMBL:AY091283 EMBL:AY088322
IPI:IPI00547032 RefSeq:NP_565912.1 RefSeq:NP_973640.1
UniGene:At.27181 PRIDE:Q8VZU1 EnsemblPlants:AT2G39725.1
EnsemblPlants:AT2G39725.2 GeneID:818557 KEGG:ath:AT2G39725
TAIR:At2g39725 InParanoid:Q8VZU1 PhylomeDB:Q8VZU1
ProtClustDB:CLSN2688809 ArrayExpress:Q8VZU1 Genevestigator:Q8VZU1
Uniprot:Q8VZU1
Length = 90
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 60/87 (68%), Positives = 68/87 (78%)
Query: 1 MGASRGPRLSGLQKQVLSLYRGFLRAARCKSAADRRQIESIVSAEFRRNSNQVDRKNFLY 60
MGAS+ LSG+QKQVLSLYRGFLRAAR + DR++IE IVS EFR NS +VDRKNF Y
Sbjct: 1 MGASK---LSGMQKQVLSLYRGFLRAARSRPIEDRKRIEMIVSTEFRHNSKEVDRKNFQY 57
Query: 61 IEYLLRRGKKQLEQLQSPNTESLSQTK 87
IEYLLR G KQL+QL+SP SLS K
Sbjct: 58 IEYLLRLGTKQLDQLKSPAIVSLSSIK 84
>UNIPROTKB|G4MQR1 [details] [associations]
symbol:MGG_11728 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF05347 InterPro:IPR008011 EMBL:CM001231 Pfam:PF13232
RefSeq:XP_003709960.1 EnsemblFungi:MGG_11728T0 GeneID:5049520
KEGG:mgr:MGG_11728 Uniprot:G4MQR1
Length = 78
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 8 RLSGLQKQVLSLYRGFLRAARCKSAADRRQIESIVSAEFRRNSNQVDRKNFLYIEYLLRR 67
RLSGLQK+VLSLYR LR R K R+ AEF RN +D+++F +EYLLR+
Sbjct: 2 RLSGLQKEVLSLYRSTLREIRKKPETSRQHFRDFARAEFDRNL-VIDKRDFAAVEYLLRK 60
Query: 68 GKKQLEQLQSPNTESL 83
G++QLE +P + +
Sbjct: 61 GRRQLETYSAPGIKDI 76
>ASPGD|ASPL0000032293 [details] [associations]
symbol:AN10717 species:162425 "Emericella nidulans"
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0034553 "mitochondrial
respiratory chain complex II assembly" evidence=IEA] Pfam:PF05347
GO:GO:0005739 EMBL:BN001305 InterPro:IPR008011 Pfam:PF13232
HOGENOM:HOG000235089 GO:GO:0034553 OMA:HLLRVGN
EnsemblFungi:CADANIAT00003270 Uniprot:C8VFE8
Length = 78
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 35/76 (46%), Positives = 49/76 (64%)
Query: 8 RLSGLQKQVLSLYRGFLRAARCKSAADRRQIESIVSAEFRRNSNQVDRKNFLYIEYLLRR 67
RLSGLQ++VLSLYR LR R K R +S AEF+++ + + +K+F IEYLLR+
Sbjct: 3 RLSGLQREVLSLYRKCLREIRKKPIESRNNFKSYARAEFQKHIS-ISKKDFSAIEYLLRK 61
Query: 68 GKKQLEQLQSPNTESL 83
G +QLE SP ++
Sbjct: 62 GSRQLEMYSSPGIRNI 77
>RGD|1559845 [details] [associations]
symbol:RGD1559845 "similar to SPBPJ4664.02" species:10116
"Rattus norvegicus" [GO:0005739 "mitochondrion" evidence=ISS]
[GO:0005759 "mitochondrial matrix" evidence=IEA] [GO:0034553
"mitochondrial respiratory chain complex II assembly" evidence=ISS]
RGD:1559845 Pfam:PF05347 GO:GO:0005739 GO:GO:0005759
InterPro:IPR008011 UniPathway:UPA00266 eggNOG:NOG256716
GeneTree:ENSGT00390000013122 HOGENOM:HOG000235089 OMA:MGAFVRP
OrthoDB:EOG4BG8XK GO:GO:0034553 EMBL:BC159436 IPI:IPI00764969
RefSeq:NP_001171158.1 RefSeq:XP_003748871.1 UniGene:Rn.3527
STRING:B0K036 PRIDE:B0K036 Ensembl:ENSRNOT00000056877
GeneID:100912030 GeneID:499125 KEGG:rno:100912030 KEGG:rno:499125
CTD:499125 NextBio:701906 Genevestigator:B0K036 Uniprot:B0K036
Length = 118
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 37/76 (48%), Positives = 52/76 (68%)
Query: 8 RLSGLQKQVLSLYRGFLRAARCKSAADRRQIESIVSAEFRRNSNQVDRKNFLYIEYLLRR 67
RLS LQ+QVLSLYR LRA R K A+ R V AEFR++++ + R + L IEYL RR
Sbjct: 3 RLSRLQRQVLSLYRELLRAGRGKPGAEAR-----VRAEFRQHAS-LPRSDVLRIEYLYRR 56
Query: 68 GKKQLEQLQSPNTESL 83
G++QL+ L+S + ++
Sbjct: 57 GRRQLQLLRSGHATAM 72
>RGD|1562079 [details] [associations]
symbol:Sdhaf1 "succinate dehydrogenase complex assembly factor
1" species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0034553 "mitochondrial respiratory chain complex
II assembly" evidence=ISO] REFSEQ:NM_001177687 Ncbi:NP_001171158
Length = 118
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 37/76 (48%), Positives = 52/76 (68%)
Query: 8 RLSGLQKQVLSLYRGFLRAARCKSAADRRQIESIVSAEFRRNSNQVDRKNFLYIEYLLRR 67
RLS LQ+QVLSLYR LRA R K A+ R V AEFR++++ + R + L IEYL RR
Sbjct: 3 RLSRLQRQVLSLYRELLRAGRGKPGAEAR-----VRAEFRQHAS-LPRSDVLRIEYLYRR 56
Query: 68 GKKQLEQLQSPNTESL 83
G++QL+ L+S + ++
Sbjct: 57 GRRQLQLLRSGHATAM 72
>UNIPROTKB|A6NFY7 [details] [associations]
symbol:SDHAF1 "Succinate dehydrogenase assembly factor 1,
mitochondrial" species:9606 "Homo sapiens" [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0016226 "iron-sulfur
cluster assembly" evidence=NAS] [GO:0034553 "mitochondrial
respiratory chain complex II assembly" evidence=IMP] [GO:0005739
"mitochondrion" evidence=IDA] Pfam:PF05347 GO:GO:0005739
GO:GO:0005759 GO:GO:0016226 InterPro:IPR008011 EMBL:AF038458
MIM:252011 Orphanet:3208 UniPathway:UPA00266 CTD:644096
HOGENOM:HOG000235089 OMA:MGAFVRP OrthoDB:EOG4BG8XK GO:GO:0034553
EMBL:BC137516 EMBL:BC137517 IPI:IPI00642491 RefSeq:NP_001036096.1
UniGene:Hs.356460 ProteinModelPortal:A6NFY7 STRING:A6NFY7
PRIDE:A6NFY7 Ensembl:ENST00000378887 GeneID:644096 KEGG:hsa:644096
UCSC:uc002ocp.3 GeneCards:GC19P036486 HGNC:HGNC:33867 MIM:612848
neXtProt:NX_A6NFY7 PharmGKB:PA165394270 eggNOG:NOG287452
InParanoid:A6NFY7 ChiTaRS:SDHAF1 NextBio:115838 Bgee:A6NFY7
Genevestigator:A6NFY7 Uniprot:A6NFY7
Length = 115
Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 36/76 (47%), Positives = 50/76 (65%)
Query: 8 RLSGLQKQVLSLYRGFLRAARCKSAADRRQIESIVSAEFRRNSNQVDRKNFLYIEYLLRR 67
R S LQ+QVLSLYR LRA R K A+ R V AEFR+++ + R + L IEYL RR
Sbjct: 3 RHSRLQRQVLSLYRDLLRAGRGKPGAEAR-----VRAEFRQHAG-LPRSDVLRIEYLYRR 56
Query: 68 GKKQLEQLQSPNTESL 83
G++QL+ L+S + ++
Sbjct: 57 GRRQLQLLRSGHATAM 72
>DICTYBASE|DDB_G0289475 [details] [associations]
symbol:sdhaf1A "putative mitochondrial succinate
dehydrogenase assembly factor 1A" species:44689 "Dictyostelium
discoideum" [GO:0005739 "mitochondrion" evidence=IEA]
dictyBase:DDB_G0289475 Pfam:PF05347 GO:GO:0005739
GenomeReviews:CM000154_GR InterPro:IPR008011 EMBL:AAFI02000141
Pfam:PF13232 eggNOG:NOG287452 RefSeq:XP_636220.1
EnsemblProtists:DDB0305170 GeneID:8627158 KEGG:ddi:DDB_G0289475
OMA:WISLAPN ProtClustDB:CLSZ2429772 Uniprot:Q54HG5
Length = 91
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 31/72 (43%), Positives = 44/72 (61%)
Query: 8 RLSGLQKQVLSLYRGFLRAARCKSAAD-RRQIESIVSAEFRRNSNQVDRKNFLYIEYLLR 66
R SGLQK VLSLYR FLR + K + I + + +FR + + +++ IE LL
Sbjct: 7 RHSGLQKAVLSLYRSFLRVSNKKEMDNPSSSISNYIKTQFRLKATTIQKRDINKIESLLV 66
Query: 67 RGKKQLEQLQSP 78
+GK+QLEQ+Q P
Sbjct: 67 KGKRQLEQIQDP 78
>UNIPROTKB|A8PU71 [details] [associations]
symbol:SDHAF1 "Succinate dehydrogenase assembly factor 1,
mitochondrial" species:9913 "Bos taurus" [GO:0005739
"mitochondrion" evidence=ISS] [GO:0034553 "mitochondrial
respiratory chain complex II assembly" evidence=ISS] [GO:0005759
"mitochondrial matrix" evidence=IEA] Pfam:PF05347 GO:GO:0005739
GO:GO:0005759 InterPro:IPR008011 UniPathway:UPA00266 EMBL:BC112496
IPI:IPI00877558 RefSeq:NP_001103912.1 UniGene:Bt.33154
Ensembl:ENSBTAT00000055698 GeneID:784051 KEGG:bta:784051 CTD:644096
eggNOG:NOG256716 GeneTree:ENSGT00390000013122 HOGENOM:HOG000235089
InParanoid:A8PU71 OMA:MGAFVRP OrthoDB:EOG4BG8XK NextBio:20926463
GO:GO:0034553 Uniprot:A8PU71
Length = 118
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 36/76 (47%), Positives = 50/76 (65%)
Query: 8 RLSGLQKQVLSLYRGFLRAARCKSAADRRQIESIVSAEFRRNSNQVDRKNFLYIEYLLRR 67
R S LQ+QVLSLYR LRA R K A+ R V AEFR+++ + R + L IEYL RR
Sbjct: 3 RHSRLQRQVLSLYRELLRAGRGKPGAEAR-----VRAEFRQHAC-LPRSDVLRIEYLYRR 56
Query: 68 GKKQLEQLQSPNTESL 83
G++QL+ L+S + ++
Sbjct: 57 GRRQLQMLRSGHATAM 72
>POMBASE|SPAC664.12c [details] [associations]
symbol:SPAC664.12c "mitochondrial succinate
dehydrogenase assembly factor 1 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005739 "mitochondrion" evidence=ISS;IDA]
[GO:0005759 "mitochondrial matrix" evidence=ISS] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0034553
"mitochondrial respiratory chain complex II assembly" evidence=ISS]
PomBase:SPAC664.12c Pfam:PF05347 EMBL:CU329670 GO:GO:0005759
GO:GO:0016226 InterPro:IPR008011 UniPathway:UPA00266
HOGENOM:HOG000235089 GO:GO:0034553 PIR:T50242 RefSeq:NP_593460.1
EnsemblFungi:SPAC664.12c.1 GeneID:2543362 KEGG:spo:SPAC664.12c
eggNOG:NOG321990 OMA:HLLRVGN OrthoDB:EOG4FJCKN NextBio:20804377
Uniprot:Q9US02
Length = 79
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 29/75 (38%), Positives = 44/75 (58%)
Query: 9 LSGLQKQVLSLYRGFLRAARCKSAADRRQIESIVSAEFRRNSNQVDRKNFLYIEYLLRRG 68
LSGLQ+QV+ YR L AA+ K + + V EFR+N + +++F YIE+LLR G
Sbjct: 3 LSGLQRQVIHFYRRCLHAAKAKEQPYNERWMAFVHQEFRKNQT-ISKRDFFYIEHLLRVG 61
Query: 69 KKQLEQLQSPNTESL 83
++Q E P + +
Sbjct: 62 QRQYEAYSRPEVKDI 76
>UNIPROTKB|F1RLD9 [details] [associations]
symbol:SDHAF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0034553 "mitochondrial respiratory chain complex II
assembly" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
Pfam:PF05347 GO:GO:0005739 InterPro:IPR008011
GeneTree:ENSGT00390000013122 OMA:MGAFVRP GO:GO:0034553
EMBL:CU694686 RefSeq:XP_003127119.1 Ensembl:ENSSSCT00000026621
GeneID:100521971 KEGG:ssc:100521971 Uniprot:F1RLD9
Length = 116
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 36/76 (47%), Positives = 50/76 (65%)
Query: 8 RLSGLQKQVLSLYRGFLRAARCKSAADRRQIESIVSAEFRRNSNQVDRKNFLYIEYLLRR 67
R S LQ+QVLSLYR LRA R K A+ R V AEFR+++ + R + L IEYL RR
Sbjct: 3 RHSRLQRQVLSLYRELLRAGRGKPGAEAR-----VRAEFRQHAC-LPRSDVLRIEYLYRR 56
Query: 68 GKKQLEQLQSPNTESL 83
G++QL+ L+S + ++
Sbjct: 57 GRRQLQLLRSGHATAM 72
>ZFIN|ZDB-GENE-050809-56 [details] [associations]
symbol:sdhaf1 "succinate dehydrogenase complex
assembly factor 1" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
ZFIN:ZDB-GENE-050809-56 InterPro:IPR008011 Pfam:PF13232 CTD:644096
GeneTree:ENSGT00390000013122 EMBL:BX248087 IPI:IPI00961313
RefSeq:XP_002665987.1 UniGene:Dr.119792 Ensembl:ENSDART00000137693
GeneID:606612 KEGG:dre:606612 NextBio:20892469 Bgee:E9QI43
Uniprot:E9QI43
Length = 87
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 8 RLSGLQKQVLSLYRGFLRAARCKSAADRRQIESIVSAEFRRNSNQVDRKNFLYIEYLLRR 67
R S LQKQVL+LYR FLRAA+ K R + EFR N+ + + + ++IEYL RR
Sbjct: 8 RHSKLQKQVLALYRQFLRAAQDKPGFIPR-----IRDEFRTNA-AIKKTDVMHIEYLYRR 61
Query: 68 GKKQLEQLQSPNTESL 83
++QLE L+ NT+ L
Sbjct: 62 AQRQLELLKDANTKQL 77
>MGI|MGI:1915582 [details] [associations]
symbol:Sdhaf1 "succinate dehydrogenase complex assembly
factor 1" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0034553 "mitochondrial respiratory chain
complex II assembly" evidence=ISO] MGI:MGI:1915582 Pfam:PF05347
GO:GO:0005739 GO:GO:0005759 InterPro:IPR008011 Pfam:PF13232
UniPathway:UPA00266 CTD:644096 eggNOG:NOG256716
GeneTree:ENSGT00390000013122 HOGENOM:HOG000235089 OrthoDB:EOG4BG8XK
GO:GO:0034553 EMBL:AK155437 EMBL:BC147173 EMBL:BC147174
IPI:IPI00654317 RefSeq:NP_001028312.2 UniGene:Mm.6844 PaxDb:Q3U276
PRIDE:Q3U276 Ensembl:ENSMUST00000098586 GeneID:68332 KEGG:mmu:68332
UCSC:uc009ged.1 InParanoid:B2RVF8 NextBio:327009 Bgee:Q3U276
Genevestigator:Q3U276 Uniprot:Q3U276
Length = 118
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 35/76 (46%), Positives = 50/76 (65%)
Query: 8 RLSGLQKQVLSLYRGFLRAARCKSAADRRQIESIVSAEFRRNSNQVDRKNFLYIEYLLRR 67
R S LQ+QVLSLYR LRA R A+ R V AEFR++++ + R + L IEYL RR
Sbjct: 3 RPSRLQRQVLSLYRELLRAGRGTPGAEAR-----VRAEFRQHAS-LPRTDVLRIEYLYRR 56
Query: 68 GKKQLEQLQSPNTESL 83
G++QL+ L+S + ++
Sbjct: 57 GRRQLQLLRSGHATAM 72
>SGD|S000007605 [details] [associations]
symbol:YDR379C-A "Protein involved in assembly of the
succinate dehydrogenase complex" species:4932 "Saccharomyces
cerevisiae" [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0034553 "mitochondrial respiratory chain complex II assembly"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
SGD:S000007605 Pfam:PF05347 GO:GO:0005739 EMBL:BK006938
GO:GO:0016226 InterPro:IPR008011 EMBL:U28373 RefSeq:NP_076888.3
GeneID:851986 KEGG:sce:YDR379C-A Pfam:PF13232 UniPathway:UPA00266
KO:K02943 RefSeq:NP_010670.3 GeneID:851990 KEGG:sce:YDR382W
HOGENOM:HOG000235089 GO:GO:0034553 eggNOG:NOG321990 OMA:HLLRVGN
OrthoDB:EOG4FJCKN ProteinModelPortal:Q3E785 STRING:Q3E785
PaxDb:Q3E785 EnsemblFungi:YDR379C-A CYGD:YDR379c-a NextBio:970142
Genevestigator:Q3E785 Uniprot:Q3E785
Length = 79
Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 8 RLSGLQKQVLSLYRGFLRAARCKSAADRRQIESIVSAEFRRNSNQVDRKNFLYIEYLLRR 67
RLSGLQK+VL LYR +R A K ++ + + EF + N + RK+F IE+LLR
Sbjct: 4 RLSGLQKEVLHLYRASIRTAHTKPKENQVNFVNYIHEEFGKYRN-LPRKDFTTIEHLLRV 62
Query: 68 GKKQLEQLQSPNTESL 83
G K++ P ++
Sbjct: 63 GNKKIATFSHPELTNI 78
>UNIPROTKB|E1C4T4 [details] [associations]
symbol:LYRM2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005739 "mitochondrion" evidence=IEA] Pfam:PF05347
GO:GO:0005739 InterPro:IPR008011 CTD:57226
GeneTree:ENSGT00390000002957 OMA:AIRMMIT InterPro:IPR026868
PANTHER:PTHR13675 EMBL:AADN02002371 IPI:IPI00594632
RefSeq:XP_003641067.1 RefSeq:XP_419836.3 UniGene:Gga.6169
Ensembl:ENSGALT00000025418 GeneID:421812 KEGG:gga:421812
Uniprot:E1C4T4
Length = 88
Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 26/65 (40%), Positives = 36/65 (55%)
Query: 13 QKQVLSLYRGFLRAARCKSA-ADRRQIESIVSAEFRRNSNQVDRKNFLYIEYLLRRGKKQ 71
++QVL LYR LRA R A ADRR ++ EFRRN + + I ++ +G Q
Sbjct: 19 RQQVLQLYRRILRALRDVPAEADRRHLQQWAREEFRRNKDATEEDA---IRMMITQGHMQ 75
Query: 72 LEQLQ 76
L +LQ
Sbjct: 76 LRELQ 80
>DICTYBASE|DDB_G0270818 [details] [associations]
symbol:sdhaf1B "putative mitochondrial succinate
dehydrogenase assembly factor 1B" species:44689 "Dictyostelium
discoideum" [GO:0005739 "mitochondrion" evidence=IEA]
dictyBase:DDB_G0270818 Pfam:PF05347 GO:GO:0005739 EMBL:AAFI02000005
GenomeReviews:CM000150_GR InterPro:IPR008011 Pfam:PF13232
RefSeq:XP_646810.1 EnsemblProtists:DDB0305171 GeneID:8617782
KEGG:ddi:DDB_G0270818 eggNOG:NOG308441 InParanoid:Q55BM0
OMA:MESYIKL Uniprot:Q55BM0
Length = 111
Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
Identities = 21/64 (32%), Positives = 41/64 (64%)
Query: 13 QKQVLSLYRGFLRAA-RCKSAADRRQIESIVSAEFRRNSNQVDRKNFLYIEYLLRRGKKQ 71
++ VL LY+ L +A RC ++ +ES + +FR N ++ +K+F IE LL++G+++
Sbjct: 10 KRLVLDLYKRCLYSAKRCPKYQNQMMMESYIKLKFRSNK-EIHQKDFETIENLLKQGEEE 68
Query: 72 LEQL 75
L+ +
Sbjct: 69 LKSM 72
>UNIPROTKB|F1S0C3 [details] [associations]
symbol:LYRM2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] Pfam:PF05347
GO:GO:0005739 InterPro:IPR008011 GeneTree:ENSGT00390000002957
OMA:AIRMMIT InterPro:IPR026868 PANTHER:PTHR13675 EMBL:FP016222
RefSeq:XP_003121347.1 UniGene:Ssc.11714 Ensembl:ENSSSCT00000004780
GeneID:100523036 KEGG:ssc:100523036 Uniprot:F1S0C3
Length = 88
Score = 89 (36.4 bits), Expect = 0.00027, P = 0.00027
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 13 QKQVLSLYRGFLRAAR-CKSAADRRQIESIVSAEFRRNSNQVDRKNFLYIEYLLRRGKKQ 71
++QVL LYR L+A R + +DRR ++ EF+RN N + I ++ +G Q
Sbjct: 19 RQQVLLLYRRILQAIRQVPNDSDRRYLKDWAREEFKRNKNATEEDT---IRMMITQGNMQ 75
Query: 72 LEQLQ 76
L++L+
Sbjct: 76 LKELE 80
>MGI|MGI:1917573 [details] [associations]
symbol:Lyrm2 "LYR motif containing 2" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0008150 "biological_process"
evidence=ND] MGI:MGI:1917573 Pfam:PF05347 GO:GO:0005739
InterPro:IPR008011 EMBL:CH466538 EMBL:AL831774 CTD:57226
eggNOG:NOG77547 GeneTree:ENSGT00390000002957 HOGENOM:HOG000007411
HOVERGEN:HBG056773 OMA:AIRMMIT OrthoDB:EOG4W9J5M InterPro:IPR026868
PANTHER:PTHR13675 EMBL:AK044791 EMBL:BC028533 IPI:IPI00153117
RefSeq:NP_780573.1 UniGene:Mm.1182 PhosphoSite:Q8R033 PaxDb:Q8R033
PRIDE:Q8R033 Ensembl:ENSMUST00000062802 GeneID:108755
KEGG:mmu:108755 UCSC:uc008sfe.2 InParanoid:A2ANY7 NextBio:361291
Bgee:Q8R033 CleanEx:MM_LYRM2 Genevestigator:Q8R033
GermOnline:ENSMUSG00000045854 Uniprot:Q8R033
Length = 88
Score = 89 (36.4 bits), Expect = 0.00027, P = 0.00027
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 13 QKQVLSLYRGFLRAAR-CKSAADRRQIESIVSAEFRRNSNQVDRKNFLYIEYLLRRGKKQ 71
++QVL LYR LRA R S +DR+ ++ EF+RN + + I ++ +G Q
Sbjct: 19 RQQVLLLYRKILRAIRQVPSDSDRKYLQDWAREEFKRNKSATEEDT---IRMMITQGNMQ 75
Query: 72 LEQLQ 76
L++L+
Sbjct: 76 LKELE 80
>RGD|1597334 [details] [associations]
symbol:Lyrm2 "LYR motif containing 2" species:10116 "Rattus
norvegicus" [GO:0005739 "mitochondrion" evidence=IEA;ISO]
RGD:1597334 Pfam:PF05347 GO:GO:0005739 InterPro:IPR008011
EMBL:CH473962 CTD:57226 eggNOG:NOG77547
GeneTree:ENSGT00390000002957 HOGENOM:HOG000007411
HOVERGEN:HBG056773 OrthoDB:EOG4W9J5M InterPro:IPR026868
PANTHER:PTHR13675 EMBL:BC166578 IPI:IPI00895604
RefSeq:NP_001119568.1 UniGene:Rn.198716 Ensembl:ENSRNOT00000065926
GeneID:690354 KEGG:rno:690354 UCSC:RGD:1597334 NextBio:740734
Genevestigator:B2GV91 Uniprot:B2GV91
Length = 88
Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
Identities = 21/65 (32%), Positives = 37/65 (56%)
Query: 13 QKQVLSLYRGFLRAAR-CKSAADRRQIESIVSAEFRRNSNQVDRKNFLYIEYLLRRGKKQ 71
++QVL LYR LRA + S +DR+ ++ EF+RN + + I ++ +G Q
Sbjct: 19 RQQVLLLYRKILRAIKQIPSDSDRKYLQDWAREEFKRNKSATEEDT---IRMMITQGNMQ 75
Query: 72 LEQLQ 76
L++L+
Sbjct: 76 LKELE 80
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.130 0.346 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 89 89 0.00091 102 3 10 22 0.45 29
29 0.50 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 522 (56 KB)
Total size of DFA: 111 KB (2076 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.20u 0.09s 14.29t Elapsed: 00:00:01
Total cpu time: 14.20u 0.09s 14.29t Elapsed: 00:00:01
Start: Thu May 9 21:15:46 2013 End: Thu May 9 21:15:47 2013