BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034617
(89 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LKA5|UMP1_ARATH Uncharacterized protein At3g15000, mitochondrial OS=Arabidopsis
thaliana GN=At3g15000 PE=1 SV=1
Length = 395
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 33/39 (84%)
Query: 50 LLEGCDYKHWLVVMEAPKGYPPRDEIVNGYVKTLASALG 88
LL+GCD++HWLVV+E P+G P RDEI++ Y+KTLA +G
Sbjct: 91 LLDGCDFEHWLVVVEPPQGEPTRDEIIDSYIKTLAQIVG 129
>sp|Q38732|DAG_ANTMA DAG protein, chloroplastic OS=Antirrhinum majus GN=DAG PE=2 SV=1
Length = 230
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Query: 50 LLEGCDYKHWLVVMEAPKG-YPPRDEIVNGYVKTLASALG 88
+L GCDY HWL+VME PK P R+++++ Y+ TLA+ LG
Sbjct: 80 MLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLG 119
>sp|Q1RAH5|HCHA_ECOUT Molecular chaperone Hsp31 and glyoxalase 3 OS=Escherichia coli
(strain UTI89 / UPEC) GN=hchA PE=3 SV=1
Length = 283
Score = 29.6 bits (65), Expect = 5.7, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 34 FFSSDSTVTQLTRLPSLLEGCDY------KHWLVVMEAPKGYPPRD 73
FF S+ +++Q T S L+G DY KH ++V+ A + Y P D
Sbjct: 19 FFPSEYSLSQYTSPVSDLDGVDYPKPYRGKHKILVIAADERYLPTD 64
>sp|A1ACB2|HCHA_ECOK1 Molecular chaperone Hsp31 and glyoxalase 3 OS=Escherichia coli
O1:K1 / APEC GN=hchA PE=3 SV=1
Length = 283
Score = 29.6 bits (65), Expect = 5.7, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 34 FFSSDSTVTQLTRLPSLLEGCDY------KHWLVVMEAPKGYPPRD 73
FF S+ +++Q T S L+G DY KH ++V+ A + Y P D
Sbjct: 19 FFPSEYSLSQYTSPVSDLDGVDYPKPYRGKHKILVIAADERYLPTD 64
>sp|B7M3A5|HCHA_ECO8A Molecular chaperone Hsp31 and glyoxalase 3 OS=Escherichia coli O8
(strain IAI1) GN=hchA PE=3 SV=1
Length = 283
Score = 29.6 bits (65), Expect = 5.7, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 34 FFSSDSTVTQLTRLPSLLEGCDY------KHWLVVMEAPKGYPPRD 73
FF S+ +++Q T S L+G DY KH ++V+ A + Y P D
Sbjct: 19 FFPSEYSLSQYTSPVSDLDGVDYPKPYRGKHKILVIAADERYLPTD 64
>sp|B7MCM0|HCHA_ECO45 Molecular chaperone Hsp31 and glyoxalase 3 OS=Escherichia coli
O45:K1 (strain S88 / ExPEC) GN=hchA PE=3 SV=1
Length = 283
Score = 29.6 bits (65), Expect = 5.7, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 34 FFSSDSTVTQLTRLPSLLEGCDY------KHWLVVMEAPKGYPPRD 73
FF S+ +++Q T S L+G DY KH ++V+ A + Y P D
Sbjct: 19 FFPSEYSLSQYTSPVSDLDGVDYPKPYRGKHKILVIAADERYLPTD 64
>sp|B6I112|HCHA_ECOSE Molecular chaperone Hsp31 and glyoxalase 3 OS=Escherichia coli
(strain SE11) GN=hchA PE=3 SV=1
Length = 283
Score = 29.6 bits (65), Expect = 5.8, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 34 FFSSDSTVTQLTRLPSLLEGCDY------KHWLVVMEAPKGYPPRD 73
FF S+ +++Q T S L+G DY KH ++V+ A + Y P D
Sbjct: 19 FFPSEYSLSQYTSPVSDLDGVDYPKPYRGKHKILVIAADERYLPTD 64
>sp|A7ZN88|HCHA_ECO24 Molecular chaperone Hsp31 and glyoxalase 3 OS=Escherichia coli
O139:H28 (strain E24377A / ETEC) GN=hchA PE=3 SV=1
Length = 283
Score = 29.6 bits (65), Expect = 5.8, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 34 FFSSDSTVTQLTRLPSLLEGCDY------KHWLVVMEAPKGYPPRD 73
FF S+ +++Q T S L+G DY KH ++V+ A + Y P D
Sbjct: 19 FFPSEYSLSQYTSPVSDLDGVDYPKPYRGKHKILVIAADERYLPTD 64
>sp|Q3Z0M5|HCHA_SHISS Molecular chaperone Hsp31 and glyoxalase 3 OS=Shigella sonnei
(strain Ss046) GN=hchA PE=3 SV=1
Length = 283
Score = 29.6 bits (65), Expect = 6.0, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 34 FFSSDSTVTQLTRLPSLLEGCDY------KHWLVVMEAPKGYPPRD 73
FF S+ +++Q T S L+G DY KH ++V+ A + Y P D
Sbjct: 19 FFPSEYSLSQYTSPVSDLDGVDYPKPYRGKHKILVIAADERYLPTD 64
>sp|B2TWL8|HCHA_SHIB3 Molecular chaperone Hsp31 and glyoxalase 3 OS=Shigella boydii
serotype 18 (strain CDC 3083-94 / BS512) GN=hchA PE=3
SV=1
Length = 283
Score = 29.6 bits (65), Expect = 6.0, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 34 FFSSDSTVTQLTRLPSLLEGCDY------KHWLVVMEAPKGYPPRD 73
FF S+ +++Q T S L+G DY KH ++V+ A + Y P D
Sbjct: 19 FFPSEYSLSQYTSPVSDLDGVDYPKPYRGKHKILVIAADERYLPTD 64
>sp|B1LQP2|HCHA_ECOSM Molecular chaperone Hsp31 and glyoxalase 3 OS=Escherichia coli
(strain SMS-3-5 / SECEC) GN=hchA PE=3 SV=1
Length = 283
Score = 29.6 bits (65), Expect = 6.0, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 34 FFSSDSTVTQLTRLPSLLEGCDY------KHWLVVMEAPKGYPPRD 73
FF S+ +++Q T S L+G DY KH ++V+ A + Y P D
Sbjct: 19 FFPSEYSLSQYTSPVSDLDGVDYPKPYRGKHKILVIAADERYLPTD 64
>sp|B7NBV8|HCHA_ECOLU Molecular chaperone Hsp31 and glyoxalase 3 OS=Escherichia coli
O17:K52:H18 (strain UMN026 / ExPEC) GN=hchA PE=3 SV=1
Length = 283
Score = 29.6 bits (65), Expect = 6.0, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 34 FFSSDSTVTQLTRLPSLLEGCDY------KHWLVVMEAPKGYPPRD 73
FF S+ +++Q T S L+G DY KH ++V+ A + Y P D
Sbjct: 19 FFPSEYSLSQYTSPVSDLDGVDYPKPYRGKHKILVIAADERYLPTD 64
>sp|B1IZU5|HCHA_ECOLC Molecular chaperone Hsp31 and glyoxalase 3 OS=Escherichia coli
(strain ATCC 8739 / DSM 1576 / Crooks) GN=hchA PE=3
SV=1
Length = 283
Score = 29.6 bits (65), Expect = 6.0, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 34 FFSSDSTVTQLTRLPSLLEGCDY------KHWLVVMEAPKGYPPRD 73
FF S+ +++Q T S L+G DY KH ++V+ A + Y P D
Sbjct: 19 FFPSEYSLSQYTSPVSDLDGVDYPKPYRGKHKILVIAADERYLPTD 64
>sp|A8A1G6|HCHA_ECOHS Molecular chaperone Hsp31 and glyoxalase 3 OS=Escherichia coli
O9:H4 (strain HS) GN=hchA PE=3 SV=1
Length = 283
Score = 29.6 bits (65), Expect = 6.0, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 34 FFSSDSTVTQLTRLPSLLEGCDY------KHWLVVMEAPKGYPPRD 73
FF S+ +++Q T S L+G DY KH ++V+ A + Y P D
Sbjct: 19 FFPSEYSLSQYTSPVSDLDGVDYPKPYRGKHKILVIAADERYLPTD 64
>sp|B7MWF3|HCHA_ECO81 Molecular chaperone Hsp31 and glyoxalase 3 OS=Escherichia coli
O81 (strain ED1a) GN=hchA PE=3 SV=1
Length = 283
Score = 29.6 bits (65), Expect = 6.0, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 34 FFSSDSTVTQLTRLPSLLEGCDY------KHWLVVMEAPKGYPPRD 73
FF S+ +++Q T S L+G DY KH ++V+ A + Y P D
Sbjct: 19 FFPSEYSLSQYTSPVSDLDGVDYPKPYRGKHKILVIAADERYLPTD 64
>sp|B5YSJ3|HCHA_ECO5E Molecular chaperone Hsp31 and glyoxalase 3 OS=Escherichia coli
O157:H7 (strain EC4115 / EHEC) GN=hchA PE=3 SV=1
Length = 283
Score = 29.6 bits (65), Expect = 6.1, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 34 FFSSDSTVTQLTRLPSLLEGCDY------KHWLVVMEAPKGYPPRD 73
FF S+ +++Q T S L+G DY KH ++V+ A + Y P D
Sbjct: 19 FFPSEYSLSQYTSPVSDLDGVDYPKPYRGKHKILVIAADERYLPTD 64
>sp|Q8XB78|HCHA_ECO57 Molecular chaperone Hsp31 and glyoxalase 3 OS=Escherichia coli
O157:H7 GN=hchA PE=3 SV=3
Length = 283
Score = 29.6 bits (65), Expect = 6.1, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 34 FFSSDSTVTQLTRLPSLLEGCDY------KHWLVVMEAPKGYPPRD 73
FF S+ +++Q T S L+G DY KH ++V+ A + Y P D
Sbjct: 19 FFPSEYSLSQYTSPVSDLDGVDYPKPYRGKHKILVIAADERYLPTD 64
>sp|P31658|HCHA_ECOLI Molecular chaperone Hsp31 and glyoxalase 3 OS=Escherichia coli
(strain K12) GN=hchA PE=1 SV=3
Length = 283
Score = 29.6 bits (65), Expect = 6.3, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 34 FFSSDSTVTQLTRLPSLLEGCDY------KHWLVVMEAPKGYPPRD 73
FF S+ +++Q T S L+G DY KH ++V+ A + Y P D
Sbjct: 19 FFPSEYSLSQYTSPVSDLDGVDYPKPYRGKHKILVIAADERYLPTD 64
>sp|B1X6B7|HCHA_ECODH Molecular chaperone Hsp31 and glyoxalase 3 OS=Escherichia coli
(strain K12 / DH10B) GN=hchA PE=3 SV=1
Length = 283
Score = 29.6 bits (65), Expect = 6.3, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 34 FFSSDSTVTQLTRLPSLLEGCDY------KHWLVVMEAPKGYPPRD 73
FF S+ +++Q T S L+G DY KH ++V+ A + Y P D
Sbjct: 19 FFPSEYSLSQYTSPVSDLDGVDYPKPYRGKHKILVIAADERYLPTD 64
>sp|C4ZQN7|HCHA_ECOBW Molecular chaperone Hsp31 and glyoxalase 3 OS=Escherichia coli
(strain K12 / MC4100 / BW2952) GN=hchA PE=3 SV=1
Length = 283
Score = 29.6 bits (65), Expect = 6.3, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 34 FFSSDSTVTQLTRLPSLLEGCDY------KHWLVVMEAPKGYPPRD 73
FF S+ +++Q T S L+G DY KH ++V+ A + Y P D
Sbjct: 19 FFPSEYSLSQYTSPVSDLDGVDYPKPYRGKHKILVIAADERYLPTD 64
>sp|B7L8Y4|HCHA_ECO55 Molecular chaperone Hsp31 and glyoxalase 3 OS=Escherichia coli
(strain 55989 / EAEC) GN=hchA PE=3 SV=1
Length = 283
Score = 29.6 bits (65), Expect = 6.4, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 34 FFSSDSTVTQLTRLPSLLEGCDY------KHWLVVMEAPKGYPPRD 73
FF S+ +++Q T S L+G DY KH ++V+ A + Y P D
Sbjct: 19 FFPSEYSLSQYTSPVSDLDGVDYPKPYRGKHKILVIAADERYLPTD 64
>sp|P59332|HCHA_SHIFL Molecular chaperone Hsp31 and glyoxalase 3 OS=Shigella flexneri
GN=hchA PE=3 SV=2
Length = 283
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 34 FFSSDSTVTQLTRLPSLLEGCDY------KHWLVVMEAPKGYPPRD 73
FF S+ +++Q T S L+G DY KH ++V+ A + Y P D
Sbjct: 19 FFPSEYSLSQYTSPVSDLDGVDYPKPYRGKHKILVIAADERYLPTD 64
>sp|Q0T3G3|HCHA_SHIF8 Molecular chaperone Hsp31 and glyoxalase 3 OS=Shigella flexneri
serotype 5b (strain 8401) GN=hchA PE=3 SV=1
Length = 283
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 34 FFSSDSTVTQLTRLPSLLEGCDY------KHWLVVMEAPKGYPPRD 73
FF S+ +++Q T S L+G DY KH ++V+ A + Y P D
Sbjct: 19 FFPSEYSLSQYTSPVSDLDGVDYPKPYRGKHKILVIAADERYLPTD 64
>sp|P59331|HCHA_ECOL6 Molecular chaperone Hsp31 and glyoxalase 3 OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=hchA PE=3
SV=2
Length = 283
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 34 FFSSDSTVTQLTRLPSLLEGCDY------KHWLVVMEAPKGYPPRD 73
FF S+ +++Q T S L+G DY KH ++V+ A + Y P D
Sbjct: 19 FFPSEYSLSQYTSPVSDLDGVDYPKPYRGKHKILVIAADERYLPTD 64
>sp|Q0TGM8|HCHA_ECOL5 Molecular chaperone Hsp31 and glyoxalase 3 OS=Escherichia coli
O6:K15:H31 (strain 536 / UPEC) GN=hchA PE=3 SV=1
Length = 283
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 34 FFSSDSTVTQLTRLPSLLEGCDY------KHWLVVMEAPKGYPPRD 73
FF S+ +++Q T S L+G DY KH ++V+ A + Y P D
Sbjct: 19 FFPSEYSLSQYTSPVSDLDGVDYPKPYRGKHKILVIAADERYLPTD 64
>sp|B7NRB5|HCHA_ECO7I Molecular chaperone Hsp31 and glyoxalase 3 OS=Escherichia coli
O7:K1 (strain IAI39 / ExPEC) GN=hchA PE=3 SV=1
Length = 283
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 34 FFSSDSTVTQLTRLPSLLEGCDY------KHWLVVMEAPKGYPPRD 73
FF S+ +++Q T S L+G DY KH ++V+ A + Y P D
Sbjct: 19 FFPSEYSLSQYTSPVSDLDGVDYPKPYRGKHKILVIAADERYLPTD 64
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,925,874
Number of Sequences: 539616
Number of extensions: 1040754
Number of successful extensions: 2123
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 2120
Number of HSP's gapped (non-prelim): 26
length of query: 89
length of database: 191,569,459
effective HSP length: 59
effective length of query: 30
effective length of database: 159,732,115
effective search space: 4791963450
effective search space used: 4791963450
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)