Query 034617
Match_columns 89
No_of_seqs 65 out of 67
Neff 2.7
Searched_HMMs 13730
Date Mon Mar 25 07:19:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034617.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/034617hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1j6xa_ d.185.1.2 (A:) Autoind 50.9 11 0.00079 25.4 4.5 32 53-88 79-110 (151)
2 d1xkta_ c.69.1.22 (A:) Fatty a 49.6 14 0.001 21.3 4.3 29 60-88 52-82 (286)
3 d1vjea_ d.185.1.2 (A:) Autoind 46.5 18 0.0013 24.2 5.1 32 53-88 74-105 (149)
4 d1ut7a_ b.143.1.1 (A:) No apic 46.3 4.6 0.00033 26.1 1.9 19 63-81 15-36 (166)
5 d1hl2a_ c.1.10.1 (A:) N-acetyl 43.3 16 0.0012 24.1 4.4 28 59-86 100-127 (295)
6 d2dw4a3 d.16.1.5 (A:655-763) L 41.2 12 0.00085 20.5 2.9 21 69-89 63-83 (109)
7 d1b5qa2 d.16.1.5 (A:294-405) P 37.6 13 0.00095 20.5 2.8 21 69-89 66-86 (112)
8 d1j98a_ d.185.1.2 (A:) Autoind 37.2 23 0.0017 23.7 4.5 32 53-88 80-111 (154)
9 d1j6wa_ d.185.1.2 (A:) Autoind 36.8 29 0.0021 23.3 5.0 32 53-88 80-111 (161)
10 d1emxa_ g.3.6.2 (A:) Heteropda 36.3 5.3 0.00039 20.8 0.7 9 49-57 5-13 (30)
11 d2v5za2 d.16.1.5 (A:290-401) M 35.1 17 0.0012 20.1 2.9 21 69-89 65-85 (112)
12 d1wyub1 c.67.1.7 (B:2-472) Gly 33.0 29 0.0021 25.7 4.8 29 56-88 410-438 (471)
13 d2ptza1 c.1.11.1 (A:139-429) E 32.6 12 0.00089 26.6 2.5 17 69-85 130-146 (291)
14 d2akza1 c.1.11.1 (A:140-433) E 30.6 14 0.001 26.4 2.5 17 69-85 130-146 (294)
15 d1zrra1 b.82.1.6 (A:1-179) Aci 30.5 22 0.0016 23.9 3.4 35 51-86 30-64 (179)
16 d2bkra1 d.3.1.7 (A:1-212) Sent 30.0 37 0.0027 21.1 4.3 14 54-67 98-112 (212)
17 d2iida2 d.16.1.5 (A:320-432) L 29.8 23 0.0017 19.6 2.9 21 69-89 64-84 (113)
18 d2al1a1 c.1.11.1 (A:142-436) E 29.7 15 0.0011 26.4 2.5 17 69-85 131-147 (295)
19 d2fyma1 c.1.11.1 (A:140-431) E 29.6 13 0.00091 26.7 2.1 22 64-85 121-143 (292)
20 d1w6ta1 c.1.11.1 (A:138-433) E 29.4 15 0.0011 26.3 2.5 16 70-85 132-147 (296)
21 d1xn9a_ d.12.1.3 (A:) Ribosoma 25.6 41 0.003 20.6 3.8 24 61-88 21-44 (101)
22 d1mzga_ d.224.1.1 (A:) SufE (Y 25.4 29 0.0021 22.1 3.2 41 48-88 43-88 (144)
23 d1phka_ d.144.1.7 (A:) gamma-s 24.1 58 0.0042 21.2 4.6 33 55-87 81-123 (277)
24 d1t17a_ d.129.3.6 (A:) Hypothe 24.1 27 0.002 20.5 2.6 18 72-89 131-148 (148)
25 d2c9wa2 d.93.1.1 (A:32-134) Su 22.8 22 0.0016 20.3 1.9 29 54-82 59-101 (103)
26 d1m6sa_ c.67.1.1 (A:) Low-spec 21.9 27 0.002 21.3 2.4 17 71-87 323-339 (343)
No 1
>d1j6xa_ d.185.1.2 (A:) Autoinducer-2 production protein LuxS {Helicobacter pylori [TaxId: 210]}
Probab=50.91 E-value=11 Score=25.42 Aligned_cols=32 Identities=28% Similarity=0.437 Sum_probs=28.9
Q ss_pred CCCcceeEEEEeCCCCCCCHHHHHHHHHHHHHHhhC
Q 034617 53 GCDYKHWLVVMEAPKGYPPRDEIVNGYVKTLASALG 88 (89)
Q Consensus 53 GcDy~HWLVvMd~P~~~psr~emId~YvkTLAkVLG 88 (89)
||..-+.|++. |.++.+|+++...++|..+++
T Consensus 79 GCrTGFYli~~----g~~~~~~i~~~~~~~l~~i~~ 110 (151)
T d1j6xa_ 79 GCQTGFYLTVL----NHDNYTEILEVLEKTMQDVLK 110 (151)
T ss_dssp TTSSEEEEEEE----SCCCHHHHHHHHHHHHHHHTT
T ss_pred ccccccEEEEe----cCCCHHHHHHHHHHHHHHHHc
Confidence 99999999995 567899999999999999875
No 2
>d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]}
Probab=49.56 E-value=14 Score=21.32 Aligned_cols=29 Identities=3% Similarity=0.109 Sum_probs=23.7
Q ss_pred EEEEeCCCC--CCCHHHHHHHHHHHHHHhhC
Q 034617 60 LVVMEAPKG--YPPRDEIVNGYVKTLASALG 88 (89)
Q Consensus 60 LVvMd~P~~--~psr~emId~YvkTLAkVLG 88 (89)
.+.+|.|+. -.+.++|.+.|++.+.++++
T Consensus 52 v~~~d~~g~~~~~~~~~~a~~~~~~~~~~~~ 82 (286)
T d1xkta_ 52 TYGLQCTRAAPLDSIHSLAAYYIDCIRQVQP 82 (286)
T ss_dssp EEEECCCTTSCCSCHHHHHHHHHHHHHHHCC
T ss_pred EEEEeCCCCCCCCCHHHHHHHHHHHHHHhcC
Confidence 567899985 66889999999998887764
No 3
>d1vjea_ d.185.1.2 (A:) Autoinducer-2 production protein LuxS {Deinococcus radiodurans [TaxId: 1299]}
Probab=46.51 E-value=18 Score=24.23 Aligned_cols=32 Identities=22% Similarity=0.596 Sum_probs=28.8
Q ss_pred CCCcceeEEEEeCCCCCCCHHHHHHHHHHHHHHhhC
Q 034617 53 GCDYKHWLVVMEAPKGYPPRDEIVNGYVKTLASALG 88 (89)
Q Consensus 53 GcDy~HWLVvMd~P~~~psr~emId~YvkTLAkVLG 88 (89)
||..-+.|++. |.++.+|+++...++|..+++
T Consensus 74 GCrTGFYl~~~----g~~~~~~i~~~~~~~l~~i~~ 105 (149)
T d1vjea_ 74 GCRTGMYMAVI----GEPDEQGVMKAFEAALKDTAG 105 (149)
T ss_dssp TTSSEEEEEEE----SSCCHHHHHHHHHHHHHHHHT
T ss_pred ccccccEEEEe----CCCCHHHHHHHHHHHHHHHHh
Confidence 99999999996 467899999999999998875
No 4
>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=46.30 E-value=4.6 Score=26.08 Aligned_cols=19 Identities=32% Similarity=0.787 Sum_probs=16.1
Q ss_pred EeCCCC---CCCHHHHHHHHHH
Q 034617 63 MEAPKG---YPPRDEIVNGYVK 81 (89)
Q Consensus 63 Md~P~~---~psr~emId~Yvk 81 (89)
|+.|.| .||-||+|.+|..
T Consensus 15 l~LPpG~RF~PTDeELv~~YL~ 36 (166)
T d1ut7a_ 15 LSLPPGFRFYPTDEELMVQYLC 36 (166)
T ss_dssp SCCCTTEEECCCHHHHHHHTHH
T ss_pred ccCCCccccCCCcHHHHHHHHH
Confidence 466777 8999999999984
No 5
>d1hl2a_ c.1.10.1 (A:) N-acetylneuraminate lyase {Escherichia coli [TaxId: 562]}
Probab=43.27 E-value=16 Score=24.10 Aligned_cols=28 Identities=14% Similarity=-0.041 Sum_probs=21.4
Q ss_pred eEEEEeCCCCCCCHHHHHHHHHHHHHHh
Q 034617 59 WLVVMEAPKGYPPRDEIVNGYVKTLASA 86 (89)
Q Consensus 59 WLVvMd~P~~~psr~emId~YvkTLAkV 86 (89)
++++|-++--.+|.+|++++|.+.++.+
T Consensus 100 ~~~v~~p~~~~~~~~~~~~~~~~~~~~~ 127 (295)
T d1hl2a_ 100 AVSAVTPFYYPFSFEEHCDHYRAIIDSA 127 (295)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHHHH
T ss_pred eeeeeeccccCCChHHHHHHHHHHhccc
Confidence 6666633323899999999999998865
No 6
>d2dw4a3 d.16.1.5 (A:655-763) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.23 E-value=12 Score=20.50 Aligned_cols=21 Identities=24% Similarity=0.232 Sum_probs=19.0
Q ss_pred CCCHHHHHHHHHHHHHHhhCC
Q 034617 69 YPPRDEIVNGYVKTLASALGW 89 (89)
Q Consensus 69 ~psr~emId~YvkTLAkVLGs 89 (89)
+-+.+|+++.-++.|++++|.
T Consensus 63 ~l~~~~~~~~~l~~L~~~~~~ 83 (109)
T d2dw4a3 63 NISDDVIVGRCLAILKGIFGS 83 (109)
T ss_dssp TSCHHHHHHHHHHHHHHHHCT
T ss_pred hcCHHHHHHHHHHHHHHHhCc
Confidence 568999999999999999874
No 7
>d1b5qa2 d.16.1.5 (A:294-405) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}
Probab=37.56 E-value=13 Score=20.53 Aligned_cols=21 Identities=5% Similarity=0.015 Sum_probs=18.4
Q ss_pred CCCHHHHHHHHHHHHHHhhCC
Q 034617 69 YPPRDEIVNGYVKTLASALGW 89 (89)
Q Consensus 69 ~psr~emId~YvkTLAkVLGs 89 (89)
.-+.+|+++...+.|++++|.
T Consensus 66 ~l~~~~~~~~~l~~L~~~~~~ 86 (112)
T d1b5qa2 66 QQSDEQTKAEIMQVLRKMFPG 86 (112)
T ss_dssp TSCHHHHHHHHHHHHHHHCTT
T ss_pred hCCHHHHHHHHHHHHHHHhCc
Confidence 458999999999999999863
No 8
>d1j98a_ d.185.1.2 (A:) Autoinducer-2 production protein LuxS {Bacillus subtilis [TaxId: 1423]}
Probab=37.23 E-value=23 Score=23.70 Aligned_cols=32 Identities=31% Similarity=0.412 Sum_probs=28.7
Q ss_pred CCCcceeEEEEeCCCCCCCHHHHHHHHHHHHHHhhC
Q 034617 53 GCDYKHWLVVMEAPKGYPPRDEIVNGYVKTLASALG 88 (89)
Q Consensus 53 GcDy~HWLVvMd~P~~~psr~emId~YvkTLAkVLG 88 (89)
||..-+.|++.. .++.+|+++...++|..++.
T Consensus 80 GCrTGFYl~~~g----~~~~~~i~~l~~~~l~~i~~ 111 (154)
T d1j98a_ 80 GCQTGYYLVVSG----ETTSAEIVDLLEDTMKEAVE 111 (154)
T ss_dssp TTSSEEEEEEEE----CCCHHHHHHHHHHHHHHHTT
T ss_pred ccccccEEEEEC----CCCHHHHHHHHHHHHHHHhc
Confidence 999999999985 57899999999999998874
No 9
>d1j6wa_ d.185.1.2 (A:) Autoinducer-2 production protein LuxS {Haemophilus influenzae [TaxId: 727]}
Probab=36.82 E-value=29 Score=23.33 Aligned_cols=32 Identities=19% Similarity=0.658 Sum_probs=28.3
Q ss_pred CCCcceeEEEEeCCCCCCCHHHHHHHHHHHHHHhhC
Q 034617 53 GCDYKHWLVVMEAPKGYPPRDEIVNGYVKTLASALG 88 (89)
Q Consensus 53 GcDy~HWLVvMd~P~~~psr~emId~YvkTLAkVLG 88 (89)
||..-+.|++. |.++.+++++...+++..+++
T Consensus 80 GCrTGFYl~~~----G~~~~~~i~~~~~~~l~~i~~ 111 (161)
T d1j6wa_ 80 GCRTGFYMSLI----GTPNEQKVSEAWLASMQDVLG 111 (161)
T ss_dssp TTSSEEEEEEE----SCCCHHHHHHHHHHHHHHHHT
T ss_pred ccccceEEEEe----CCCCHHHHHHHHHHHHHHHHc
Confidence 99999999997 456889999999999998875
No 10
>d1emxa_ g.3.6.2 (A:) Heteropdatoxin 2, hptx2 {Giant crab spider (Heteropoda venatoria) [TaxId: 152925]}
Probab=36.30 E-value=5.3 Score=20.82 Aligned_cols=9 Identities=44% Similarity=1.036 Sum_probs=7.3
Q ss_pred ccccCCCcc
Q 034617 49 SLLEGCDYK 57 (89)
Q Consensus 49 ~Lf~GcDy~ 57 (89)
-||.|||.+
T Consensus 5 ~lfsgc~t~ 13 (30)
T d1emxa_ 5 KLFSGCDTN 13 (30)
T ss_dssp CTTCTTCST
T ss_pred cccccCCCC
Confidence 589999975
No 11
>d2v5za2 d.16.1.5 (A:290-401) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.08 E-value=17 Score=20.14 Aligned_cols=21 Identities=19% Similarity=0.222 Sum_probs=19.0
Q ss_pred CCCHHHHHHHHHHHHHHhhCC
Q 034617 69 YPPRDEIVNGYVKTLASALGW 89 (89)
Q Consensus 69 ~psr~emId~YvkTLAkVLGs 89 (89)
.-+++|.++.-.+.|++++|.
T Consensus 65 ~ls~~e~~~~~l~~L~~~~g~ 85 (112)
T d2v5za2 65 RLTKEERLKKLCELYAKVLGS 85 (112)
T ss_dssp TSCHHHHHHHHHHHHHHHHTC
T ss_pred hCCHHHHHHHHHHHHHHHhCc
Confidence 579999999999999999873
No 12
>d1wyub1 c.67.1.7 (B:2-472) Glycine dehydrogenase subunit 2 (P-protein) {Thermus thermophilus [TaxId: 274]}
Probab=33.04 E-value=29 Score=25.68 Aligned_cols=29 Identities=10% Similarity=0.360 Sum_probs=21.1
Q ss_pred cceeEEEEeCCCCCCCHHHHHHHHHHHHHHhhC
Q 034617 56 YKHWLVVMEAPKGYPPRDEIVNGYVKTLASALG 88 (89)
Q Consensus 56 y~HWLVvMd~P~~~psr~emId~YvkTLAkVLG 88 (89)
-+++|| -+..+-||||| |.|++.|..|++
T Consensus 410 ~~~llv---~vTE~~tkedI-D~lv~aL~~i~~ 438 (471)
T d1wyub1 410 KEALMV---EPTETEAKETL-EAFAEAMGALLK 438 (471)
T ss_dssp TTCEEE---CCCTTSCHHHH-HHHHHHHHHHHT
T ss_pred CCeEEE---ecCCCCCHHHH-HHHHHHHHHHHH
Confidence 345554 34446788885 999999999986
No 13
>d2ptza1 c.1.11.1 (A:139-429) Enolase {Trypanosoma brucei [TaxId: 5691]}
Probab=32.65 E-value=12 Score=26.65 Aligned_cols=17 Identities=12% Similarity=0.253 Sum_probs=14.7
Q ss_pred CCCHHHHHHHHHHHHHH
Q 034617 69 YPPRDEIVNGYVKTLAS 85 (89)
Q Consensus 69 ~psr~emId~YvkTLAk 85 (89)
.-|.+||||+|.+-+.+
T Consensus 130 ~ls~~elid~y~~l~~~ 146 (291)
T d2ptza1 130 WVTAEQLRETYCKWAHD 146 (291)
T ss_dssp EECHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHhhc
Confidence 56999999999998765
No 14
>d2akza1 c.1.11.1 (A:140-433) Enolase {Human (Homo sapiens), gamma isoform [TaxId: 9606]}
Probab=30.62 E-value=14 Score=26.44 Aligned_cols=17 Identities=18% Similarity=0.233 Sum_probs=14.7
Q ss_pred CCCHHHHHHHHHHHHHH
Q 034617 69 YPPRDEIVNGYVKTLAS 85 (89)
Q Consensus 69 ~psr~emId~YvkTLAk 85 (89)
.-|.+||||+|.+-+.+
T Consensus 130 ~~t~delid~y~~l~~k 146 (294)
T d2akza1 130 YITGDQLGALYQDFVRD 146 (294)
T ss_dssp CBCHHHHHHHHHHHHHH
T ss_pred eecHHHHHHHHHHHhcc
Confidence 47899999999998765
No 15
>d1zrra1 b.82.1.6 (A:1-179) Acireductone dioxygenase {Klebsiella pneumoniae [TaxId: 573]}
Probab=30.54 E-value=22 Score=23.94 Aligned_cols=35 Identities=11% Similarity=0.425 Sum_probs=24.1
Q ss_pred ccCCCcceeEEEEeCCCCCCCHHHHHHHHHHHHHHh
Q 034617 51 LEGCDYKHWLVVMEAPKGYPPRDEIVNGYVKTLASA 86 (89)
Q Consensus 51 f~GcDy~HWLVvMd~P~~~psr~emId~YvkTLAkV 86 (89)
=-|-.|+||-+--+.+ ...+++|++++|..-+.++
T Consensus 30 ~~gv~~e~W~~~~~~~-~~a~~~~iL~ay~~~i~~L 64 (179)
T d1zrra1 30 AKGVRFERWQADRDLG-AAPTAETVIAAYQHAIDKL 64 (179)
T ss_dssp HTTCCCCCCCCSSCCC-CCCCHHHHHHHHHHHHHHH
T ss_pred HCCeEEEeccCCCcCC-CcccHHHHHHHHHHHHHHH
Confidence 3488999995422221 2678999999997766554
No 16
>d2bkra1 d.3.1.7 (A:1-212) Sentrin-specific protease 8, SENP8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.04 E-value=37 Score=21.10 Aligned_cols=14 Identities=36% Similarity=0.605 Sum_probs=10.0
Q ss_pred CCccee-EEEEeCCC
Q 034617 54 CDYKHW-LVVMEAPK 67 (89)
Q Consensus 54 cDy~HW-LVvMd~P~ 67 (89)
++-.|| |+++++++
T Consensus 98 ~~g~HW~l~vi~~~~ 112 (212)
T d2bkra1 98 AGGSHWSLLVYLQDK 112 (212)
T ss_dssp SBCCCEEEEEEEGGG
T ss_pred cCcceeeeeeecccc
Confidence 344799 77888765
No 17
>d2iida2 d.16.1.5 (A:320-432) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}
Probab=29.84 E-value=23 Score=19.62 Aligned_cols=21 Identities=5% Similarity=-0.157 Sum_probs=18.6
Q ss_pred CCCHHHHHHHHHHHHHHhhCC
Q 034617 69 YPPRDEIVNGYVKTLASALGW 89 (89)
Q Consensus 69 ~psr~emId~YvkTLAkVLGs 89 (89)
.-+.||+++.-++.|+++.|.
T Consensus 64 ~l~~e~~~~~~l~~L~~~~~~ 84 (113)
T d2iida2 64 ALDFKDCADIVFNDLSLIHQL 84 (113)
T ss_dssp TSCHHHHHHHHHHHHHHHHTC
T ss_pred cCCHHHHHHHHHHHHHHHcCC
Confidence 568999999999999999873
No 18
>d2al1a1 c.1.11.1 (A:142-436) Enolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=29.67 E-value=15 Score=26.36 Aligned_cols=17 Identities=6% Similarity=0.186 Sum_probs=14.7
Q ss_pred CCCHHHHHHHHHHHHHH
Q 034617 69 YPPRDEIVNGYVKTLAS 85 (89)
Q Consensus 69 ~psr~emId~YvkTLAk 85 (89)
.-|.+||||+|.+.+.+
T Consensus 131 ~~s~~elid~y~~li~~ 147 (295)
T d2al1a1 131 WLTGPQLADLYHSLMKR 147 (295)
T ss_dssp CBCHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHh
Confidence 56899999999998765
No 19
>d2fyma1 c.1.11.1 (A:140-431) Enolase {Escherichia coli [TaxId: 562]}
Probab=29.61 E-value=13 Score=26.75 Aligned_cols=22 Identities=5% Similarity=-0.103 Sum_probs=16.6
Q ss_pred eCCCC-CCCHHHHHHHHHHHHHH
Q 034617 64 EAPKG-YPPRDEIVNGYVKTLAS 85 (89)
Q Consensus 64 d~P~~-~psr~emId~YvkTLAk 85 (89)
++.++ .-|.+||||+|.+.+.+
T Consensus 121 ~~~~~~~~t~~eli~~y~~l~~~ 143 (292)
T d2fyma1 121 AGEGNKAFTSEEFTHFLEELTKQ 143 (292)
T ss_dssp GGGTTEEECHHHHHHHHHHHHHH
T ss_pred ccCCCccccHHHHHHHHHHHHhc
Confidence 34444 56999999999988764
No 20
>d1w6ta1 c.1.11.1 (A:138-433) Enolase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=29.37 E-value=15 Score=26.33 Aligned_cols=16 Identities=6% Similarity=0.030 Sum_probs=13.9
Q ss_pred CCHHHHHHHHHHHHHH
Q 034617 70 PPRDEIVNGYVKTLAS 85 (89)
Q Consensus 70 psr~emId~YvkTLAk 85 (89)
-|.+||||+|.+-+.+
T Consensus 132 ~s~~elid~y~~l~~~ 147 (296)
T d1w6ta1 132 RTSAEQIDYLEELVNK 147 (296)
T ss_dssp ECHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhc
Confidence 5899999999988765
No 21
>d1xn9a_ d.12.1.3 (A:) Ribosomal protein S24e {Methanosarcina mazei [TaxId: 2209]}
Probab=25.60 E-value=41 Score=20.57 Aligned_cols=24 Identities=25% Similarity=0.464 Sum_probs=16.5
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHhhC
Q 034617 61 VVMEAPKGYPPRDEIVNGYVKTLASALG 88 (89)
Q Consensus 61 VvMd~P~~~psr~emId~YvkTLAkVLG 88 (89)
+.+..|+..||+.||++- ||+.+|
T Consensus 21 ~~v~h~g~Tpsr~ei~~k----la~~~~ 44 (101)
T d1xn9a_ 21 FIVKYEGSTPSRNDVRNK----LAAMLN 44 (101)
T ss_dssp EEEECSSSCCCHHHHHHH----HHHHTT
T ss_pred EEEECCCCCCCHHHHHHH----HHHhHC
Confidence 445568669999999765 455454
No 22
>d1mzga_ d.224.1.1 (A:) SufE (YhnA) {Escherichia coli [TaxId: 562]}
Probab=25.39 E-value=29 Score=22.08 Aligned_cols=41 Identities=20% Similarity=0.481 Sum_probs=32.8
Q ss_pred CccccCCCcceeEEEEeCCCC-----CCCHHHHHHHHHHHHHHhhC
Q 034617 48 PSLLEGCDYKHWLVVMEAPKG-----YPPRDEIVNGYVKTLASALG 88 (89)
Q Consensus 48 ~~Lf~GcDy~HWLVvMd~P~~-----~psr~emId~YvkTLAkVLG 88 (89)
.-.-.||...=|++.-...++ ..|...||..++.+|..++.
T Consensus 43 ~n~V~GCqS~vWl~~~~~~~~~~~f~~dSda~IvkGl~ail~~~~~ 88 (144)
T d1mzga_ 43 QNSIQGCQSQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYD 88 (144)
T ss_dssp GGEECSSSSCEEEEEEECSSSCEEEEEEESSHHHHHHHHHHHHHTT
T ss_pred hheeccceeeEEEeeeeccCCceEEEeeCchHHHHHHHHHHHHHHC
Confidence 346789999999997766554 34888999999999988874
No 23
>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=24.12 E-value=58 Score=21.22 Aligned_cols=33 Identities=12% Similarity=0.291 Sum_probs=21.2
Q ss_pred CcceeEEEEeC-CCC---------CCCHHHHHHHHHHHHHHhh
Q 034617 55 DYKHWLVVMEA-PKG---------YPPRDEIVNGYVKTLASAL 87 (89)
Q Consensus 55 Dy~HWLVvMd~-P~~---------~psr~emId~YvkTLAkVL 87 (89)
|.+|+.++||+ +++ .+-.++-+..|.+-++++|
T Consensus 81 ~~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al 123 (277)
T d1phka_ 81 TNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI 123 (277)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred cCcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 56789999999 553 2334555666666555554
No 24
>d1t17a_ d.129.3.6 (A:) Hypothetical protein CC1736 {Caulobacter crescentus [TaxId: 155892]}
Probab=24.06 E-value=27 Score=20.46 Aligned_cols=18 Identities=6% Similarity=0.106 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHhhCC
Q 034617 72 RDEIVNGYVKTLASALGW 89 (89)
Q Consensus 72 r~emId~YvkTLAkVLGs 89 (89)
-+.||+++++-+-++-||
T Consensus 131 ~~~~i~aF~~Ra~~lyg~ 148 (148)
T d1t17a_ 131 AGKLIACFEARAQQLHGA 148 (148)
T ss_dssp HHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHhCc
Confidence 457899999998888886
No 25
>d2c9wa2 d.93.1.1 (A:32-134) Suppressor of cytokine signaling 2, SOCS-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.77 E-value=22 Score=20.32 Aligned_cols=29 Identities=10% Similarity=0.179 Sum_probs=19.7
Q ss_pred CCcceeEEEEeCCC--------------CCCCHHHHHHHHHHH
Q 034617 54 CDYKHWLVVMEAPK--------------GYPPRDEIVNGYVKT 82 (89)
Q Consensus 54 cDy~HWLVvMd~P~--------------~~psr~emId~YvkT 82 (89)
....|-.|..+.-+ .-+|-.|||++|.+-
T Consensus 59 ~~v~H~~I~~~~~~~~~~~~~~~~~~~~~F~sl~~LI~~y~~~ 101 (103)
T d2c9wa2 59 AGPTNLRIEYQDGKFRLDSIICVKSKLKQFDSVVHLIDYYVQM 101 (103)
T ss_dssp TEEEEEEEEEETTEEEECTTTTTGGGCCCBSCHHHHHHHHHHH
T ss_pred CEEEEEEEEEcCCeEeeCCccccccCCCccCCHHHHHHHHHhh
Confidence 34568888665311 135999999999985
No 26
>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]}
Probab=21.87 E-value=27 Score=21.29 Aligned_cols=17 Identities=0% Similarity=0.016 Sum_probs=14.2
Q ss_pred CHHHHHHHHHHHHHHhh
Q 034617 71 PRDEIVNGYVKTLASAL 87 (89)
Q Consensus 71 sr~emId~YvkTLAkVL 87 (89)
..+|.||..+++|.+|+
T Consensus 323 ~t~edid~~v~~l~~v~ 339 (343)
T d1m6sa_ 323 VSRNDIEEALNIFEKLF 339 (343)
T ss_dssp SCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 35788899999999986
Done!