BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034621
METEKIKDKEKEKVCKRCKQTYTASSNSSSSCRFHPSFFVCRRHDDQKRYYELGPDDPPY
AAKFYDCCGAEDADASGCITGFHVSYDDE

High Scoring Gene Products

Symbol, full name Information P value
AT1G65000 protein from Arabidopsis thaliana 1.0e-27
AT5G38060 protein from Arabidopsis thaliana 1.5e-05

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034621
        (89 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2010866 - symbol:AT1G65000 "AT1G65000" species...   310  1.0e-27   1
TAIR|locus:2144436 - symbol:AT5G38060 "AT5G38060" species...   101  1.5e-05   1


>TAIR|locus:2010866 [details] [associations]
            symbol:AT1G65000 "AT1G65000" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0006661 "phosphatidylinositol biosynthetic
            process" evidence=RCA] EMBL:CP002684 GenomeReviews:CT485782_GR
            EMBL:BT004666 EMBL:AK118039 IPI:IPI00516932 RefSeq:NP_176680.2
            UniGene:At.35940 ProteinModelPortal:Q8GXU4 IntAct:Q8GXU4
            PRIDE:Q8GXU4 EnsemblPlants:AT1G65000.1 GeneID:842808
            KEGG:ath:AT1G65000 TAIR:At1g65000 eggNOG:NOG282571
            HOGENOM:HOG000240575 InParanoid:Q8GXU4 OMA:PHISYDD PhylomeDB:Q8GXU4
            ProtClustDB:CLSN2680776 Genevestigator:Q8GXU4 Uniprot:Q8GXU4
        Length = 83

 Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
 Identities = 52/69 (75%), Positives = 56/69 (81%)

Query:    20 QTYTAXXXXXXXCRFHPSFFVCRRHDDQKRYYELGPDDPPYAAKFYDCCGAEDADASGCI 79
             Q+YT        CRFHPSFFVCRRHDDQKRYYEL PDDPPYAAKFYDCCGAED +A GC+
Sbjct:    15 QSYTDLSNETSSCRFHPSFFVCRRHDDQKRYYELKPDDPPYAAKFYDCCGAEDPNAPGCV 74

Query:    80 TGFHVSYDD 88
             T  H+SYDD
Sbjct:    75 TNPHISYDD 83


>TAIR|locus:2144436 [details] [associations]
            symbol:AT5G38060 "AT5G38060" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AY954870 EMBL:DQ132731
            IPI:IPI00536973 RefSeq:NP_198622.1 UniGene:At.55208
            ProteinModelPortal:Q58FT9 PRIDE:Q58FT9 EnsemblPlants:AT5G38060.1
            GeneID:833786 KEGG:ath:AT5G38060 TAIR:At5g38060
            HOGENOM:HOG000006062 InParanoid:Q58FT9 OMA:KTLRTCK PhylomeDB:Q58FT9
            ProtClustDB:CLSN2687082 Genevestigator:Q58FT9 Uniprot:Q58FT9
        Length = 134

 Score = 101 (40.6 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 22/60 (36%), Positives = 29/60 (48%)

Query:    32 CRFHPSFFVCRRHDDQKRYYELGPDDPPYAAK---FYDCCGAEDADASGCITGFHVSYDD 88
             CRFH + F        +  Y  G  D P + K   ++ CCG+ED   SGC    H +YDD
Sbjct:    75 CRFHTAHFGGETKRKFESVYTGGTMDTPNSGKVLQYWHCCGSEDPFDSGCTASPHTTYDD 134


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.142   0.493    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       89        64   0.00091  102 3  12 22  0.40    28
                                                     29  0.44    28


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  432 (46 KB)
  Total size of DFA:  80 KB (2065 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  6.28u 0.07s 6.35t   Elapsed:  00:00:02
  Total cpu time:  6.28u 0.07s 6.35t   Elapsed:  00:00:03
  Start:  Thu May  9 21:29:43 2013   End:  Thu May  9 21:29:46 2013

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