BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034621
(89 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54YA0|ACLY_DICDI Probable ATP-citrate synthase OS=Dictyostelium discoideum GN=acly
PE=1 SV=1
Length = 622
Score = 32.7 bits (73), Expect = 0.63, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 58 PPYAAKFYDCCGAEDADASGCITGFH 83
PPYA+KF++ C AD C++G H
Sbjct: 410 PPYASKFFEMCLKLVADHGPCVSGAH 435
>sp|Q4KLY2|FBX46_RAT F-box only protein 46 OS=Rattus norvegicus GN=Fbxo46 PE=2 SV=1
Length = 603
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 17/69 (24%)
Query: 15 CKRCKQTYTASSNSSSSCRFHPSFFVCRRHDDQKRYYELGPDDPPYAAKFYDCCGAEDAD 74
CK+C++ Y S CR+HP K Y+ D PY ++ CC D +
Sbjct: 530 CKQCRKRY--EKGDVSLCRWHP-----------KPYHH----DLPYGRSYWMCCRRADRE 572
Query: 75 ASGCITGFH 83
GC G H
Sbjct: 573 TPGCRLGLH 581
>sp|Q8BG80|FBX46_MOUSE F-box only protein 46 OS=Mus musculus GN=Fbxo46 PE=2 SV=1
Length = 603
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 17/69 (24%)
Query: 15 CKRCKQTYTASSNSSSSCRFHPSFFVCRRHDDQKRYYELGPDDPPYAAKFYDCCGAEDAD 74
CK+C++ Y S CR+HP K Y+ D PY ++ CC D +
Sbjct: 530 CKQCRKRY--EKGDVSLCRWHP-----------KPYHH----DLPYGRSYWMCCRRADRE 572
Query: 75 ASGCITGFH 83
GC G H
Sbjct: 573 TPGCRLGLH 581
>sp|Q6PJ61|FBX46_HUMAN F-box only protein 46 OS=Homo sapiens GN=FBXO46 PE=1 SV=3
Length = 603
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 17/69 (24%)
Query: 15 CKRCKQTYTASSNSSSSCRFHPSFFVCRRHDDQKRYYELGPDDPPYAAKFYDCCGAEDAD 74
CK+C++ Y S CR+HP K Y+ D PY ++ CC D +
Sbjct: 530 CKQCRKRY--EKGDVSLCRWHP-----------KPYHH----DLPYGRSYWMCCRRADRE 572
Query: 75 ASGCITGFH 83
GC G H
Sbjct: 573 TPGCRLGLH 581
>sp|Q80XI1|FBX34_MOUSE F-box only protein 34 OS=Mus musculus GN=Fbxo34 PE=2 SV=2
Length = 695
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 17/73 (23%)
Query: 11 KEKVCKRCKQTYTASSNSSSSCRFHPSFFVCRRHDDQKRYYELGPDDPPYAAKFYDCCGA 70
+E CK+CK+ Y S CR+HP + C+ PY ++ CC
Sbjct: 612 REDPCKQCKKKYV--KGDVSLCRWHPKPY-CQAL--------------PYGPGYWMCCHQ 654
Query: 71 EDADASGCITGFH 83
GC G H
Sbjct: 655 SQKGFPGCKLGLH 667
>sp|Q9NWN3|FBX34_HUMAN F-box only protein 34 OS=Homo sapiens GN=FBXO34 PE=2 SV=2
Length = 711
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 17/73 (23%)
Query: 11 KEKVCKRCKQTYTASSNSSSSCRFHPSFFVCRRHDDQKRYYELGPDDPPYAAKFYDCCGA 70
+E CK+CK+ Y S CR+HP + C+ PY ++ CC
Sbjct: 628 REDPCKQCKKKYV--KGDVSLCRWHPKPY-CQAL--------------PYGPGYWMCCHR 670
Query: 71 EDADASGCITGFH 83
GC G H
Sbjct: 671 SQKGFPGCKLGLH 683
>sp|Q9R000|ITBP2_MOUSE Integrin beta-1-binding protein 2 OS=Mus musculus GN=Itgb1bp2
PE=2 SV=1
Length = 350
Score = 28.9 bits (63), Expect = 9.8, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 28/76 (36%), Gaps = 23/76 (30%)
Query: 16 KRCKQTYTASSNSSSSCRFHPSFFVCRRHDDQKRYYELGPDDPPYAAKFYDCCGAEDADA 75
K C Q + ++N SCR+HP + HD A K + CC D
Sbjct: 8 KGCGQHFDPNTNLPDSCRYHPGVPIF--HD---------------ALKGWSCCRKRTVDF 50
Query: 76 S------GCITGFHVS 85
S GC G H +
Sbjct: 51 SEFLNIKGCTVGLHCA 66
>sp|Q5ZJW8|DTL_CHICK Denticleless protein homolog OS=Gallus gallus GN=DTL PE=2 SV=1
Length = 720
Score = 28.9 bits (63), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 19/49 (38%)
Query: 41 CRRHDDQKRYYELGPDDPPYAAKFYDCCGAEDADASGCITGFHVSYDDE 89
C R DD Y E+G PP+ F E A GF YD E
Sbjct: 30 CSREDDHLSYGEIGMPVPPFGCSFSAAPNFEHVLAVANEEGFVRLYDTE 78
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,233,781
Number of Sequences: 539616
Number of extensions: 1351720
Number of successful extensions: 5016
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 4975
Number of HSP's gapped (non-prelim): 45
length of query: 89
length of database: 191,569,459
effective HSP length: 59
effective length of query: 30
effective length of database: 159,732,115
effective search space: 4791963450
effective search space used: 4791963450
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)