Query 034621
Match_columns 89
No_of_seqs 102 out of 277
Neff 5.9
Searched_HMMs 13730
Date Mon Mar 25 07:23:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034621.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/034621hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1btka_ b.55.1.1 (A:) Bruton's 96.1 0.00097 7.1E-08 43.0 1.7 18 63-80 149-166 (169)
2 d1vd4a_ g.41.3.1 (A:) Transcri 79.6 0.28 2.1E-05 27.3 0.9 25 1-25 2-27 (62)
3 d1a1ia2 g.37.1.1 (A:132-159) Z 70.9 0.35 2.6E-05 22.7 -0.2 17 11-27 2-18 (28)
4 d1wiga2 g.39.1.3 (A:33-73) Act 70.7 0.71 5.2E-05 23.6 1.0 25 14-38 1-27 (41)
5 d1ubdc2 g.37.1.1 (C:323-350) Y 63.2 0.9 6.6E-05 21.3 0.4 14 13-26 3-16 (28)
6 d2cota2 g.37.1.1 (A:7-44) Zinc 59.6 0.76 5.6E-05 22.6 -0.3 20 8-27 8-27 (38)
7 d1x6ea2 g.37.1.1 (A:41-66) Zin 59.1 0.76 5.5E-05 21.3 -0.3 15 12-26 2-16 (26)
8 d1srka_ g.37.1.1 (A:) Zinc fin 58.2 0.88 6.4E-05 22.3 -0.2 19 10-28 5-23 (35)
9 d2gmga1 a.4.5.82 (A:1-105) Hyp 55.9 2.4 0.00018 25.6 1.6 27 11-37 66-92 (105)
10 d2ct1a2 g.37.1.1 (A:8-43) Tran 55.2 1 7.6E-05 21.9 -0.2 18 10-27 6-23 (36)
11 d1p7aa_ g.37.1.1 (A:) Kruppel- 53.5 1.2 8.6E-05 21.8 -0.2 19 9-27 8-26 (37)
12 d1x6ea1 g.37.1.1 (A:8-40) Zinc 52.6 2.2 0.00016 20.4 0.8 18 10-27 5-22 (33)
13 d1g47a1 g.39.1.3 (A:1-35) Pinc 52.3 2.5 0.00018 20.8 0.9 16 11-26 6-21 (35)
14 d1x6ha2 g.37.1.1 (A:8-43) Tran 49.8 1.4 0.00011 21.3 -0.2 18 10-27 6-23 (36)
15 d1zina2 g.41.2.1 (A:126-160) M 46.3 3.9 0.00028 19.8 1.2 18 12-29 2-19 (35)
16 d2adra1 g.37.1.1 (A:102-130) A 44.2 1.8 0.00013 20.0 -0.3 16 12-27 2-17 (29)
17 d2epsa1 g.37.1.1 (A:408-446) P 43.6 2.1 0.00015 21.3 -0.2 29 10-38 3-32 (39)
18 d2dmda2 g.37.1.1 (A:8-33) Zinc 42.1 0.6 4.3E-05 21.5 -2.3 16 13-28 2-17 (26)
19 d1sp1a_ g.37.1.1 (A:) Transcri 40.6 2.6 0.00019 19.5 -0.1 16 12-27 2-17 (29)
20 d1akya2 g.41.2.1 (A:131-168) M 40.1 5.8 0.00042 19.5 1.3 18 12-29 2-19 (38)
21 d1ibia1 g.39.1.3 (A:117-144) C 38.6 6 0.00043 18.4 1.1 23 13-35 2-25 (28)
22 d1x6ha1 g.37.1.1 (A:44-80) Tra 37.6 4.6 0.00033 19.7 0.6 13 12-24 4-16 (37)
23 d1s3ga2 g.41.2.1 (A:126-160) M 37.2 6.5 0.00048 18.9 1.2 17 12-28 2-18 (35)
24 d1e4va2 g.41.2.1 (A:122-156) M 34.8 7.1 0.00052 18.8 1.1 17 12-28 2-18 (35)
25 d1a1ia3 g.37.1.1 (A:160-187) Z 34.5 4.6 0.00033 18.8 0.3 16 11-26 2-17 (28)
26 d2ak3a2 g.41.2.1 (A:125-161) M 34.2 7.3 0.00053 19.0 1.0 18 12-29 2-19 (37)
27 d2dloa1 g.39.1.3 (A:8-42) Thyr 33.9 11 0.00077 18.4 1.6 29 10-38 6-34 (35)
28 d2epra1 g.37.1.1 (A:350-384) P 32.8 5.7 0.00042 19.2 0.5 13 12-24 5-17 (35)
29 d1njqa_ g.37.1.3 (A:) SUPERMAN 31.6 7.6 0.00056 19.1 0.9 16 10-25 3-18 (37)
30 d1d4ua2 g.39.1.5 (A:1-36) DNA 31.6 8 0.00059 18.9 0.9 15 11-25 4-18 (36)
31 d1x3ha1 g.39.1.3 (A:8-42) Leup 31.4 10 0.00073 18.1 1.3 26 13-38 9-34 (35)
32 d1pfva3 g.41.1.1 (A:141-175) M 29.8 7.2 0.00052 19.0 0.6 17 10-26 13-29 (35)
33 d1joca1 g.50.1.1 (A:1348-1411) 28.4 8.9 0.00065 20.3 0.9 20 5-24 1-20 (64)
34 d1rqga3 g.41.1.1 (A:139-173) M 27.7 14 0.0011 17.7 1.5 18 10-27 13-30 (35)
35 d2csha1 g.37.1.1 (A:8-60) Zinc 26.1 8.2 0.0006 19.2 0.4 15 10-24 28-42 (53)
36 d1nnqa2 g.41.5.1 (A:135-171) R 25.8 14 0.001 17.9 1.3 21 10-32 3-23 (37)
37 d1ubdc4 g.37.1.1 (C:381-408) Y 25.5 13 0.00093 16.9 1.0 16 13-28 3-20 (28)
38 d2glia3 g.37.1.1 (A:168-197) F 24.9 1.4 0.0001 20.8 -2.7 26 12-37 2-29 (30)
39 d2epqa1 g.37.1.1 (A:380-411) P 24.4 7.5 0.00055 18.3 0.0 16 12-27 3-18 (32)
40 d2dlqa3 g.37.1.1 (A:63-92) GLI 24.0 13 0.00094 17.2 0.8 15 10-24 2-16 (30)
41 d1wiia_ g.41.3.4 (A:) Hypothet 23.6 14 0.001 21.2 1.1 21 7-27 42-62 (85)
42 d1dx8a_ g.41.5.1 (A:) Rubredox 22.6 20 0.0015 19.7 1.7 21 9-29 4-24 (70)
43 d2dsxa1 g.41.5.1 (A:1-52) Rubr 22.4 15 0.0011 19.1 1.0 18 12-29 3-20 (52)
44 d1zfda_ g.37.1.1 (A:) SWI5 zin 22.2 10 0.00073 17.8 0.2 17 11-27 2-20 (32)
45 d1wjva2 g.37.1.2 (A:36-66) Cel 22.2 19 0.0014 16.9 1.3 20 13-32 3-23 (31)
46 d1ncsa_ g.37.1.1 (A:) SWI5 zin 22.0 17 0.0012 18.2 1.2 21 8-28 14-36 (47)
47 d1x3ha2 g.39.1.3 (A:43-74) Leu 21.5 16 0.0011 17.3 0.9 10 14-23 1-10 (32)
No 1
>d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.10 E-value=0.00097 Score=42.95 Aligned_cols=18 Identities=33% Similarity=0.765 Sum_probs=15.9
Q ss_pred ceeecCCCCCCCCCCCCc
Q 034621 63 KFYDCCGAEDADASGCIT 80 (89)
Q Consensus 63 k~WsCCg~~~~~~~GC~~ 80 (89)
.+||||.+.+..++||+-
T Consensus 149 ~~w~c~~~~~~~~~~~~~ 166 (169)
T d1btka_ 149 GQYLCCSQTAKNAMGCQI 166 (169)
T ss_dssp TEETTTCCCCTTSCCSEE
T ss_pred CEEcCCCCcCCCCCCCee
Confidence 479999999999999974
No 2
>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.58 E-value=0.28 Score=27.33 Aligned_cols=25 Identities=24% Similarity=0.465 Sum_probs=17.9
Q ss_pred Ccchhhhcc-ccccccccccceeecc
Q 034621 1 METEKIKDK-EKEKVCKRCKQTYTAS 25 (89)
Q Consensus 1 ~~~~~~~~~-~~~~~C~~C~~~F~~~ 25 (89)
||++.+... .+..+|.+|+++|+.-
T Consensus 2 ie~~~rd~~~~~~y~Cp~C~~~ys~L 27 (62)
T d1vd4a_ 2 IETDERDSTNRASFKCPVCSSTFTDL 27 (62)
T ss_dssp CCCCSSSCCSSSEEECSSSCCEEEHH
T ss_pred cchhhhccccCCceECCCCCCCcchh
Confidence 455544443 6778999999999863
No 3
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=70.85 E-value=0.35 Score=22.72 Aligned_cols=17 Identities=24% Similarity=0.622 Sum_probs=13.6
Q ss_pred cccccccccceeeccCC
Q 034621 11 KEKVCKRCKQTYTASSN 27 (89)
Q Consensus 11 ~~~~C~~C~~~F~~~~N 27 (89)
....|..|++.|...+|
T Consensus 2 KPy~C~~C~k~F~~~~~ 18 (28)
T d1a1ia2 2 KPFQCRICMRNFSRSDH 18 (28)
T ss_dssp CCEECTTTCCEESCHHH
T ss_pred cCccCCCCcCEeccccc
Confidence 35789999999987654
No 4
>d1wiga2 g.39.1.3 (A:33-73) Actin-binding LIM protein 2, abLIM2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=70.70 E-value=0.71 Score=23.63 Aligned_cols=25 Identities=28% Similarity=0.692 Sum_probs=17.5
Q ss_pred ccccccceeeccCC--CCCCceeCCCC
Q 034621 14 VCKRCKQTYTASSN--SSSSCRFHPSF 38 (89)
Q Consensus 14 ~C~~C~~~F~~~~N--~~~sC~yHpG~ 38 (89)
+|.||++.|.+-+. ..++=.+||.-
T Consensus 1 ~C~rC~~mF~EGEEMYLQGs~IWHP~C 27 (41)
T d1wiga2 1 LCVRCGQMFAEGEEMYLQGSSIWHPAC 27 (41)
T ss_dssp CCSSSCCCCCSSCCCEEETTEEECTTH
T ss_pred CcchhhccccccceeeecCCceeCCcc
Confidence 59999999986433 34666777764
No 5
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}
Probab=63.20 E-value=0.9 Score=21.26 Aligned_cols=14 Identities=36% Similarity=0.892 Sum_probs=11.6
Q ss_pred cccccccceeeccC
Q 034621 13 KVCKRCKQTYTASS 26 (89)
Q Consensus 13 ~~C~~C~~~F~~~~ 26 (89)
.+|..||+.|.++.
T Consensus 3 hvc~ecgkaf~ess 16 (28)
T d1ubdc2 3 HVCAECGKAFVESS 16 (28)
T ss_dssp EECTTTCCEESSHH
T ss_pred chHHHHhHHHHHHH
Confidence 57999999998754
No 6
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
Probab=59.56 E-value=0.76 Score=22.61 Aligned_cols=20 Identities=20% Similarity=0.647 Sum_probs=15.5
Q ss_pred ccccccccccccceeeccCC
Q 034621 8 DKEKEKVCKRCKQTYTASSN 27 (89)
Q Consensus 8 ~~~~~~~C~~C~~~F~~~~N 27 (89)
..+....|..|++.|.-..|
T Consensus 8 t~ekpy~C~~CgK~F~~~s~ 27 (38)
T d2cota2 8 RERRRYKCDECGKSFSHSSD 27 (38)
T ss_dssp CCSCSSBCSSSCCBCSCHHH
T ss_pred CCCCCEecCCCCceeeCHHH
Confidence 34567899999999986554
No 7
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}
Probab=59.06 E-value=0.76 Score=21.27 Aligned_cols=15 Identities=20% Similarity=0.611 Sum_probs=11.7
Q ss_pred ccccccccceeeccC
Q 034621 12 EKVCKRCKQTYTASS 26 (89)
Q Consensus 12 ~~~C~~C~~~F~~~~ 26 (89)
...|..||+.|....
T Consensus 2 Py~C~eCgK~F~~~s 16 (26)
T d1x6ea2 2 PYKCLECGKAFSQNS 16 (26)
T ss_dssp CEECSSSCCEESSHH
T ss_pred CccCCCCcCeeccCc
Confidence 357999999997643
No 8
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=58.16 E-value=0.88 Score=22.26 Aligned_cols=19 Identities=26% Similarity=0.681 Sum_probs=14.9
Q ss_pred ccccccccccceeeccCCC
Q 034621 10 EKEKVCKRCKQTYTASSNS 28 (89)
Q Consensus 10 ~~~~~C~~C~~~F~~~~N~ 28 (89)
+....|..|++.|....|.
T Consensus 5 ekPy~C~~C~k~F~~~~~L 23 (35)
T d1srka_ 5 KRPFVCRICLSAFTTKANC 23 (35)
T ss_dssp CSCEECSSSCCEESSHHHH
T ss_pred CccccCCCCCCcccChHHH
Confidence 4567899999999876653
No 9
>d2gmga1 a.4.5.82 (A:1-105) Hypothetical protein PF0610 {Pyrococcus furiosus [TaxId: 2261]}
Probab=55.93 E-value=2.4 Score=25.62 Aligned_cols=27 Identities=30% Similarity=0.538 Sum_probs=20.3
Q ss_pred cccccccccceeeccCCCCCCceeCCC
Q 034621 11 KEKVCKRCKQTYTASSNSSSSCRFHPS 37 (89)
Q Consensus 11 ~~~~C~~C~~~F~~~~N~~~sC~yHpG 37 (89)
..-.|+.||-.|+..-|.|+.|--=-+
T Consensus 66 ~Pp~CrkCGfvFr~~~kkPSRCP~CKS 92 (105)
T d2gmga1 66 KPAQCRKCGFVFKAEINIPSRCPKCKS 92 (105)
T ss_dssp CCCBBTTTCCBCCCCSSCCSSCSSSCC
T ss_pred eChhhhhcCCeecccCCCCCCCCCCCC
Confidence 345799999999888888888843333
No 10
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.15 E-value=1 Score=21.94 Aligned_cols=18 Identities=33% Similarity=0.584 Sum_probs=14.5
Q ss_pred ccccccccccceeeccCC
Q 034621 10 EKEKVCKRCKQTYTASSN 27 (89)
Q Consensus 10 ~~~~~C~~C~~~F~~~~N 27 (89)
+....|..|++.|....|
T Consensus 6 ekP~~C~~C~k~F~~~~~ 23 (36)
T d2ct1a2 6 EKPYECYICHARFTQSGT 23 (36)
T ss_dssp CCSEECTTTCCEESCHHH
T ss_pred CCCEeCCCCcccccchHH
Confidence 456789999999987655
No 11
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}
Probab=53.52 E-value=1.2 Score=21.76 Aligned_cols=19 Identities=21% Similarity=0.520 Sum_probs=14.8
Q ss_pred cccccccccccceeeccCC
Q 034621 9 KEKEKVCKRCKQTYTASSN 27 (89)
Q Consensus 9 ~~~~~~C~~C~~~F~~~~N 27 (89)
.+....|..|++.|....|
T Consensus 8 geKPy~C~~C~k~F~~~~~ 26 (37)
T d1p7aa_ 8 GIKPFQCPDCDRSFSRSDH 26 (37)
T ss_dssp CSSSBCCTTTCCCBSSHHH
T ss_pred CccCeEeCCCCCEecCHHH
Confidence 3567789999999986554
No 12
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.59 E-value=2.2 Score=20.41 Aligned_cols=18 Identities=33% Similarity=0.578 Sum_probs=13.9
Q ss_pred ccccccccccceeeccCC
Q 034621 10 EKEKVCKRCKQTYTASSN 27 (89)
Q Consensus 10 ~~~~~C~~C~~~F~~~~N 27 (89)
+....|..|++.|....+
T Consensus 5 ekpy~C~~Cgk~F~~~~~ 22 (33)
T d1x6ea1 5 EKPYGCVECGKAFSRSSI 22 (33)
T ss_dssp CCCEECSSSCCEESSHHH
T ss_pred CCCeeCCCCCCEeCchHH
Confidence 456789999999976543
No 13
>d1g47a1 g.39.1.3 (A:1-35) Pinch (particularly interesting new Cys-His) protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.27 E-value=2.5 Score=20.78 Aligned_cols=16 Identities=25% Similarity=0.765 Sum_probs=13.1
Q ss_pred cccccccccceeeccC
Q 034621 11 KEKVCKRCKQTYTASS 26 (89)
Q Consensus 11 ~~~~C~~C~~~F~~~~ 26 (89)
....|.||+..|.+.+
T Consensus 6 ~~~~C~RC~~gF~p~E 21 (35)
T d1g47a1 6 ASATCERCKGGFAPAE 21 (35)
T ss_dssp CCCBCSSSCCBCCSTT
T ss_pred HHHHHHHHccCCCchH
Confidence 4568999999999865
No 14
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}
Probab=49.79 E-value=1.4 Score=21.31 Aligned_cols=18 Identities=28% Similarity=0.639 Sum_probs=14.1
Q ss_pred ccccccccccceeeccCC
Q 034621 10 EKEKVCKRCKQTYTASSN 27 (89)
Q Consensus 10 ~~~~~C~~C~~~F~~~~N 27 (89)
+....|..|++.|....+
T Consensus 6 ekPy~C~~C~k~F~~~~~ 23 (36)
T d1x6ha2 6 EKPYACSHCDKTFRQKQL 23 (36)
T ss_dssp CCCEECSSSSCEESSHHH
T ss_pred CCCEECCCCCCCcCCHhH
Confidence 456789999999986544
No 15
>d1zina2 g.41.2.1 (A:126-160) Microbial and mitochondrial ADK, insert "zinc finger" domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=46.26 E-value=3.9 Score=19.83 Aligned_cols=18 Identities=22% Similarity=0.687 Sum_probs=13.8
Q ss_pred ccccccccceeeccCCCC
Q 034621 12 EKVCKRCKQTYTASSNSS 29 (89)
Q Consensus 12 ~~~C~~C~~~F~~~~N~~ 29 (89)
.++|..||..|-...|.+
T Consensus 2 Rr~C~~CG~~Yh~~~~pP 19 (35)
T d1zina2 2 RRICRNCGATYHLIFHPP 19 (35)
T ss_dssp EEEETTTCCEEETTTBCC
T ss_pred ccCCcCcCchhccccCCC
Confidence 368999999998766643
No 16
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}
Probab=44.15 E-value=1.8 Score=20.05 Aligned_cols=16 Identities=19% Similarity=0.654 Sum_probs=12.5
Q ss_pred ccccccccceeeccCC
Q 034621 12 EKVCKRCKQTYTASSN 27 (89)
Q Consensus 12 ~~~C~~C~~~F~~~~N 27 (89)
...|..|++.|.-..+
T Consensus 2 p~~C~~C~k~F~~~~~ 17 (29)
T d2adra1 2 SFVCEVCTRAFARQEH 17 (29)
T ss_dssp CBCCTTTCCCBSCHHH
T ss_pred cCCCCCCCCCCCCchH
Confidence 3579999999986554
No 17
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.59 E-value=2.1 Score=21.25 Aligned_cols=29 Identities=17% Similarity=0.444 Sum_probs=19.3
Q ss_pred ccccccccccceeeccCCCCCCc-eeCCCC
Q 034621 10 EKEKVCKRCKQTYTASSNSSSSC-RFHPSF 38 (89)
Q Consensus 10 ~~~~~C~~C~~~F~~~~N~~~sC-~yHpG~ 38 (89)
+....|..|++.|....|...-= +.|.|.
T Consensus 3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~e 32 (39)
T d2epsa1 3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSE 32 (39)
T ss_dssp SCCEECSSSCCEESSHHHHHHHHHHTSCCC
T ss_pred CCCccCCCCCCCcCChHHhhccCcCccCCC
Confidence 34678999999998776644332 246654
No 18
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.08 E-value=0.6 Score=21.53 Aligned_cols=16 Identities=13% Similarity=0.549 Sum_probs=12.4
Q ss_pred cccccccceeeccCCC
Q 034621 13 KVCKRCKQTYTASSNS 28 (89)
Q Consensus 13 ~~C~~C~~~F~~~~N~ 28 (89)
..|..|++-|...++.
T Consensus 2 hkc~~c~kcfsrkdkl 17 (26)
T d2dmda2 2 HKCEVCGKCFSRKDKL 17 (26)
T ss_dssp CCBTTTTBCCCCHHHH
T ss_pred CccchhhhHhcchhHH
Confidence 4688999999876653
No 19
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.60 E-value=2.6 Score=19.51 Aligned_cols=16 Identities=19% Similarity=0.611 Sum_probs=12.6
Q ss_pred ccccccccceeeccCC
Q 034621 12 EKVCKRCKQTYTASSN 27 (89)
Q Consensus 12 ~~~C~~C~~~F~~~~N 27 (89)
...|..|++.|.-..+
T Consensus 2 py~C~~C~k~F~~~s~ 17 (29)
T d1sp1a_ 2 KFACPECPKRFMRSDH 17 (29)
T ss_dssp CSCCTTTTCCCSCSHH
T ss_pred CEECCcCCCeecchHH
Confidence 3579999999987654
No 20
>d1akya2 g.41.2.1 (A:131-168) Microbial and mitochondrial ADK, insert "zinc finger" domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=40.12 E-value=5.8 Score=19.50 Aligned_cols=18 Identities=11% Similarity=0.150 Sum_probs=13.7
Q ss_pred ccccccccceeeccCCCC
Q 034621 12 EKVCKRCKQTYTASSNSS 29 (89)
Q Consensus 12 ~~~C~~C~~~F~~~~N~~ 29 (89)
.++|..||..|-...|.+
T Consensus 2 Rr~C~~cG~~Yh~~~~pp 19 (38)
T d1akya2 2 RLIHPASGRSYHKIFNPP 19 (38)
T ss_dssp EEECTTTCCEEETTTBCC
T ss_pred ccCCcCccchhhhhccCc
Confidence 368999999998766643
No 21
>d1ibia1 g.39.1.3 (A:117-144) Cysteine-rich (intestinal) protein, CRP, CRIP {Japanese quail (Coturnix coturnix japonica), CRP2 [TaxId: 93934]}
Probab=38.60 E-value=6 Score=18.35 Aligned_cols=23 Identities=22% Similarity=0.479 Sum_probs=12.7
Q ss_pred cccccccceeecc-CCCCCCceeC
Q 034621 13 KVCKRCKQTYTAS-SNSSSSCRFH 35 (89)
Q Consensus 13 ~~C~~C~~~F~~~-~N~~~sC~yH 35 (89)
.+|.||++.-..+ .-...-..+|
T Consensus 2 d~CpRC~~~VyaAEkviGaG~~WH 25 (28)
T d1ibia1 2 EKCSRCGDSVYAAEKVIGAGKPWH 25 (28)
T ss_dssp EECTTTSSEESSSSCEESSSSEEC
T ss_pred CcCcccchhHHHHHHHhcCCCccc
Confidence 3689999875433 3333334444
No 22
>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.59 E-value=4.6 Score=19.73 Aligned_cols=13 Identities=38% Similarity=0.917 Sum_probs=10.9
Q ss_pred ccccccccceeec
Q 034621 12 EKVCKRCKQTYTA 24 (89)
Q Consensus 12 ~~~C~~C~~~F~~ 24 (89)
..+|..|++.|..
T Consensus 4 afvcskcgktftr 16 (37)
T d1x6ha1 4 AFVCSKCGKTFTR 16 (37)
T ss_dssp CEECSSSCCEESC
T ss_pred eeeecccccchhc
Confidence 4689999999975
No 23
>d1s3ga2 g.41.2.1 (A:126-160) Microbial and mitochondrial ADK, insert "zinc finger" domain {Bacillus globisporus [TaxId: 1459]}
Probab=37.25 E-value=6.5 Score=18.92 Aligned_cols=17 Identities=29% Similarity=0.714 Sum_probs=12.9
Q ss_pred ccccccccceeeccCCC
Q 034621 12 EKVCKRCKQTYTASSNS 28 (89)
Q Consensus 12 ~~~C~~C~~~F~~~~N~ 28 (89)
..+|..|+..|-...|.
T Consensus 2 R~~C~~CG~~Yh~~~~p 18 (35)
T d1s3ga2 2 RRICKVCGTSYHLLFNP 18 (35)
T ss_dssp EEEETTTCCEEETTTBC
T ss_pred ccCCcCcCchhccccCC
Confidence 35799999999765553
No 24
>d1e4va2 g.41.2.1 (A:122-156) Microbial and mitochondrial ADK, insert "zinc finger" domain {Escherichia coli [TaxId: 562]}
Probab=34.85 E-value=7.1 Score=18.78 Aligned_cols=17 Identities=18% Similarity=0.266 Sum_probs=13.0
Q ss_pred ccccccccceeeccCCC
Q 034621 12 EKVCKRCKQTYTASSNS 28 (89)
Q Consensus 12 ~~~C~~C~~~F~~~~N~ 28 (89)
.++|..||..|-..-|.
T Consensus 2 Rr~c~~cG~~Yh~~~~P 18 (35)
T d1e4va2 2 RRVHAPSGRVYHVKFNP 18 (35)
T ss_dssp EEEETTTTEEEETTTBC
T ss_pred ccCCcCcCChhhhccCc
Confidence 36899999999776553
No 25
>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=34.48 E-value=4.6 Score=18.79 Aligned_cols=16 Identities=25% Similarity=0.602 Sum_probs=12.1
Q ss_pred cccccccccceeeccC
Q 034621 11 KEKVCKRCKQTYTASS 26 (89)
Q Consensus 11 ~~~~C~~C~~~F~~~~ 26 (89)
....|.-|+..|..++
T Consensus 2 kPf~C~~CgrkFArsd 17 (28)
T d1a1ia3 2 KPFACDICGRKFARSD 17 (28)
T ss_dssp CCEECTTTCCEESSHH
T ss_pred CCcccchhhhhhhcch
Confidence 3567999999997543
No 26
>d2ak3a2 g.41.2.1 (A:125-161) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=34.15 E-value=7.3 Score=19.02 Aligned_cols=18 Identities=11% Similarity=0.134 Sum_probs=13.8
Q ss_pred ccccccccceeeccCCCC
Q 034621 12 EKVCKRCKQTYTASSNSS 29 (89)
Q Consensus 12 ~~~C~~C~~~F~~~~N~~ 29 (89)
.++|..||..|-..-|.+
T Consensus 2 R~vc~~cG~~Yh~~~~pP 19 (37)
T d2ak3a2 2 RWIHPGSGRVYNIEFNPP 19 (37)
T ss_dssp EEEETTTTEEEETTTBCC
T ss_pred ceeeCCcCChhhhccCCc
Confidence 468999999998766643
No 27
>d2dloa1 g.39.1.3 (A:8-42) Thyroid receptor interacting protein 6, TRIP6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.86 E-value=11 Score=18.37 Aligned_cols=29 Identities=17% Similarity=0.342 Sum_probs=19.6
Q ss_pred ccccccccccceeeccCCCCCCceeCCCC
Q 034621 10 EKEKVCKRCKQTYTASSNSSSSCRFHPSF 38 (89)
Q Consensus 10 ~~~~~C~~C~~~F~~~~N~~~sC~yHpG~ 38 (89)
..+.+|-.|++.-.+---...-=.|||+-
T Consensus 6 ~tlEkC~~C~~~I~driLrA~Gk~yHP~C 34 (35)
T d2dloa1 6 ATLEKCATCSQPILDRILRAMGKAYHPGC 34 (35)
T ss_dssp SSCCBCTTTCCBCCSCCEEETTEEECTTT
T ss_pred HHHHHHHHhchHHHHHHHHHhCCCCCCCC
Confidence 45678999998866544334445788874
No 28
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.84 E-value=5.7 Score=19.19 Aligned_cols=13 Identities=15% Similarity=0.675 Sum_probs=10.5
Q ss_pred ccccccccceeec
Q 034621 12 EKVCKRCKQTYTA 24 (89)
Q Consensus 12 ~~~C~~C~~~F~~ 24 (89)
..-|.-||+.|..
T Consensus 5 ~~~ce~cgk~frd 17 (35)
T d2epra1 5 QVACEICGKIFRD 17 (35)
T ss_dssp SEEETTTTEEESS
T ss_pred hhhHHHHHHHHHH
Confidence 3469999999975
No 29
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=31.65 E-value=7.6 Score=19.11 Aligned_cols=16 Identities=19% Similarity=0.665 Sum_probs=12.5
Q ss_pred ccccccccccceeecc
Q 034621 10 EKEKVCKRCKQTYTAS 25 (89)
Q Consensus 10 ~~~~~C~~C~~~F~~~ 25 (89)
.....|+-|++.|...
T Consensus 3 ~r~~~C~~C~k~F~s~ 18 (37)
T d1njqa_ 3 PRSYTCSFCKREFRSA 18 (37)
T ss_dssp SSSEECTTTCCEESSH
T ss_pred CCccCCCCCCCccCCc
Confidence 3457899999999753
No 30
>d1d4ua2 g.39.1.5 (A:1-36) DNA repair factor XPA DNA- and RPA-binding domain, N-terminal subdomain {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.59 E-value=8 Score=18.91 Aligned_cols=15 Identities=20% Similarity=0.678 Sum_probs=12.1
Q ss_pred cccccccccceeecc
Q 034621 11 KEKVCKRCKQTYTAS 25 (89)
Q Consensus 11 ~~~~C~~C~~~F~~~ 25 (89)
...+|.-|++.|..+
T Consensus 4 dy~~C~eCg~~F~DS 18 (36)
T d1d4ua2 4 DYVICEECGKEFMDS 18 (36)
T ss_dssp CCEECTTTCCEESCS
T ss_pred cHHHHHHhCcHHHHH
Confidence 457899999999765
No 31
>d1x3ha1 g.39.1.3 (A:8-42) Leupaxin {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.37 E-value=10 Score=18.12 Aligned_cols=26 Identities=19% Similarity=0.400 Sum_probs=18.2
Q ss_pred cccccccceeeccCCCCCCceeCCCC
Q 034621 13 KVCKRCKQTYTASSNSSSSCRFHPSF 38 (89)
Q Consensus 13 ~~C~~C~~~F~~~~N~~~sC~yHpG~ 38 (89)
.+|..|++.-...--...--.|||.-
T Consensus 9 pkC~~C~~~I~g~~v~Al~~~wHpeC 34 (35)
T d1x3ha1 9 PKCGGCNRPVLENYLSAMDTVWHPEC 34 (35)
T ss_dssp CBCTTTCCBCCSSCEEETTEEECTTT
T ss_pred hhhhhcCCcccchheeecCCccCccc
Confidence 47999998876554444556888864
No 32
>d1pfva3 g.41.1.1 (A:141-175) Methionyl-tRNA synthetase (MetRS), Zn-domain {Escherichia coli [TaxId: 562]}
Probab=29.83 E-value=7.2 Score=18.96 Aligned_cols=17 Identities=24% Similarity=0.624 Sum_probs=13.0
Q ss_pred ccccccccccceeeccC
Q 034621 10 EKEKVCKRCKQTYTASS 26 (89)
Q Consensus 10 ~~~~~C~~C~~~F~~~~ 26 (89)
...-.|..|+..|.+.+
T Consensus 13 a~GDqCe~CG~~~~p~e 29 (35)
T d1pfva3 13 QYGDNCEVCGATYSPTE 29 (35)
T ss_dssp EETTBCTTTCCBCCGGG
T ss_pred cccccHHHcCCcCCHHH
Confidence 34567999999998765
No 33
>d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.44 E-value=8.9 Score=20.29 Aligned_cols=20 Identities=15% Similarity=0.512 Sum_probs=14.0
Q ss_pred hhhccccccccccccceeec
Q 034621 5 KIKDKEKEKVCKRCKQTYTA 24 (89)
Q Consensus 5 ~~~~~~~~~~C~~C~~~F~~ 24 (89)
||........|..|+..|..
T Consensus 1 rW~~d~~~~~C~~C~~~F~~ 20 (64)
T d1joca1 1 KWAEDNEVQNCMACGKGFSV 20 (64)
T ss_dssp CCCCGGGCCBCTTTCCBCCS
T ss_pred CCCCcccCCcCcCcCCcccC
Confidence 45556666778888888853
No 34
>d1rqga3 g.41.1.1 (A:139-173) Methionyl-tRNA synthetase (MetRS), Zn-domain {Pyrococcus abyssi [TaxId: 29292]}
Probab=27.67 E-value=14 Score=17.75 Aligned_cols=18 Identities=22% Similarity=0.446 Sum_probs=13.3
Q ss_pred ccccccccccceeeccCC
Q 034621 10 EKEKVCKRCKQTYTASSN 27 (89)
Q Consensus 10 ~~~~~C~~C~~~F~~~~N 27 (89)
...-.|..|+..|++.+-
T Consensus 13 a~GDqCe~CG~~~~p~eL 30 (35)
T d1rqga3 13 QKGDQCEVCGRPLTPEIL 30 (35)
T ss_dssp CCTTTCSSSCCCCCTTSS
T ss_pred ccCcchhhcCCccCHHHh
Confidence 345678889999987664
No 35
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.15 E-value=8.2 Score=19.24 Aligned_cols=15 Identities=13% Similarity=0.421 Sum_probs=9.2
Q ss_pred ccccccccccceeec
Q 034621 10 EKEKVCKRCKQTYTA 24 (89)
Q Consensus 10 ~~~~~C~~C~~~F~~ 24 (89)
+....|..|++.|..
T Consensus 28 ekpy~C~~C~k~F~~ 42 (53)
T d2csha1 28 LRPYGCGVCGKKFKM 42 (53)
T ss_dssp CCSEECTTTSCEESS
T ss_pred ccCCcCCCcCCEecC
Confidence 344567777777654
No 36
>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=25.77 E-value=14 Score=17.87 Aligned_cols=21 Identities=24% Similarity=0.512 Sum_probs=15.2
Q ss_pred ccccccccccceeeccCCCCCCc
Q 034621 10 EKEKVCKRCKQTYTASSNSSSSC 32 (89)
Q Consensus 10 ~~~~~C~~C~~~F~~~~N~~~sC 32 (89)
....+|..||-.+..+ .+..|
T Consensus 3 ~~~~~C~vCG~i~~g~--~P~~C 23 (37)
T d1nnqa2 3 KKVYICPICGYTAVDE--APEYC 23 (37)
T ss_dssp SCEEECTTTCCEEESC--CCSBC
T ss_pred CcEEECCCCCCEecCC--CCCcC
Confidence 4567899999998863 45555
No 37
>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.50 E-value=13 Score=16.94 Aligned_cols=16 Identities=31% Similarity=0.750 Sum_probs=12.4
Q ss_pred cccc--cccceeeccCCC
Q 034621 13 KVCK--RCKQTYTASSNS 28 (89)
Q Consensus 13 ~~C~--~C~~~F~~~~N~ 28 (89)
.+|. +|++.|..++|.
T Consensus 3 f~C~~~gC~K~F~~~~~L 20 (28)
T d1ubdc4 3 YVCPFDGCNKKFAQSTNL 20 (28)
T ss_dssp CCCCSTTCCCCCSSTTTT
T ss_pred cCCCCCCcCCcCCCHHHH
Confidence 5785 499999987764
No 38
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.86 E-value=1.4 Score=20.76 Aligned_cols=26 Identities=23% Similarity=0.524 Sum_probs=15.9
Q ss_pred cccccc--ccceeeccCCCCCCceeCCC
Q 034621 12 EKVCKR--CKQTYTASSNSSSSCRFHPS 37 (89)
Q Consensus 12 ~~~C~~--C~~~F~~~~N~~~sC~yHpG 37 (89)
..+|.- |+++|....+...-=+-|.|
T Consensus 2 p~~C~~~gCgk~F~~~~~L~~H~r~HtG 29 (30)
T d2glia3 2 PHKCTFEGCRKSYSRLENLKTHLRSHTG 29 (30)
T ss_dssp CCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred CeeCCCCCCCceECChhHhhhhcCcCcC
Confidence 357865 99999876654333333433
No 39
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.38 E-value=7.5 Score=18.33 Aligned_cols=16 Identities=13% Similarity=0.405 Sum_probs=12.7
Q ss_pred ccccccccceeeccCC
Q 034621 12 EKVCKRCKQTYTASSN 27 (89)
Q Consensus 12 ~~~C~~C~~~F~~~~N 27 (89)
...|.-|+|+|...+.
T Consensus 3 p~~cpic~qrfkrkdr 18 (32)
T d2epqa1 3 PYSCPVCGLRFKRKDR 18 (32)
T ss_dssp SSEETTTTEECSCHHH
T ss_pred CcccchHHHHhhcccc
Confidence 4679999999987654
No 40
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.99 E-value=13 Score=17.17 Aligned_cols=15 Identities=27% Similarity=0.689 Sum_probs=11.9
Q ss_pred ccccccccccceeec
Q 034621 10 EKEKVCKRCKQTYTA 24 (89)
Q Consensus 10 ~~~~~C~~C~~~F~~ 24 (89)
++..+|.-|.+.|..
T Consensus 2 eqvftcs~cqe~f~r 16 (30)
T d2dlqa3 2 EQVFTCSVCQETFRR 16 (30)
T ss_dssp CCCEECSSSCCEESS
T ss_pred cceEEeHHHHHHHHH
Confidence 456789999999864
No 41
>d1wiia_ g.41.3.4 (A:) Hypothetical UPF0222 protein MGC4549 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.60 E-value=14 Score=21.19 Aligned_cols=21 Identities=10% Similarity=0.308 Sum_probs=14.7
Q ss_pred hccccccccccccceeeccCC
Q 034621 7 KDKEKEKVCKRCKQTYTASSN 27 (89)
Q Consensus 7 ~~~~~~~~C~~C~~~F~~~~N 27 (89)
+.......|+.|++.|+-.-|
T Consensus 42 k~~~g~l~C~vCg~~~~~~i~ 62 (85)
T d1wiia_ 42 ARNTGVISCTVCLEEFQTPIT 62 (85)
T ss_dssp TTTEEEEEESSSCCEEEEECC
T ss_pred cCCEEEEEEecCCCeEEeccc
Confidence 334556679999999976555
No 42
>d1dx8a_ g.41.5.1 (A:) Rubredoxin {Guillardia theta [TaxId: 55529]}
Probab=22.59 E-value=20 Score=19.71 Aligned_cols=21 Identities=19% Similarity=0.472 Sum_probs=16.6
Q ss_pred cccccccccccceeeccCCCC
Q 034621 9 KEKEKVCKRCKQTYTASSNSS 29 (89)
Q Consensus 9 ~~~~~~C~~C~~~F~~~~N~~ 29 (89)
.+....|+.|+-.|+++.-.+
T Consensus 4 ~~~ky~C~~CgyiYDp~~GD~ 24 (70)
T d1dx8a_ 4 DEGKYECEACGYIYEPEKGDK 24 (70)
T ss_dssp CSSCEEETTTCCEECTTTCCT
T ss_pred cCCeEEcCCCCeEECcccCCc
Confidence 456778999999999887544
No 43
>d2dsxa1 g.41.5.1 (A:1-52) Rubredoxin {Desulfovibrio gigas [TaxId: 879]}
Probab=22.40 E-value=15 Score=19.07 Aligned_cols=18 Identities=22% Similarity=0.508 Sum_probs=14.3
Q ss_pred ccccccccceeeccCCCC
Q 034621 12 EKVCKRCKQTYTASSNSS 29 (89)
Q Consensus 12 ~~~C~~C~~~F~~~~N~~ 29 (89)
...|..|+-.|+++...+
T Consensus 3 ~y~C~~CgyiYdp~~Gd~ 20 (52)
T d2dsxa1 3 IYVCTVCGYEYDPAKGDP 20 (52)
T ss_dssp CEEETTTCCEECTTTCBG
T ss_pred eEEeCCCCeEECcccCCc
Confidence 468999999999876543
No 44
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=22.22 E-value=10 Score=17.76 Aligned_cols=17 Identities=12% Similarity=0.651 Sum_probs=12.6
Q ss_pred ccccccc--ccceeeccCC
Q 034621 11 KEKVCKR--CKQTYTASSN 27 (89)
Q Consensus 11 ~~~~C~~--C~~~F~~~~N 27 (89)
....|.- |++.|...+|
T Consensus 2 rP~~C~~pgC~k~F~r~~~ 20 (32)
T d1zfda_ 2 RPYSCDHPGCDKAFVRNHD 20 (32)
T ss_dssp CSBCCCCTTCCCCBSSSHH
T ss_pred cCeECcCCCCCCeeCCHHH
Confidence 3467864 9999987665
No 45
>d1wjva2 g.37.1.2 (A:36-66) Cell growth regulating nucleolar protein LyaR {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.22 E-value=19 Score=16.92 Aligned_cols=20 Identities=20% Similarity=0.537 Sum_probs=13.6
Q ss_pred cccccccceeeccCC-CCCCc
Q 034621 13 KVCKRCKQTYTASSN-SSSSC 32 (89)
Q Consensus 13 ~~C~~C~~~F~~~~N-~~~sC 32 (89)
..|.-|++.|...+- .-++|
T Consensus 3 ~sCiDC~~~F~~~~y~~Ht~C 23 (31)
T d1wjva2 3 LSCIDCGKDFWGDDYKSHVKC 23 (31)
T ss_dssp EEETTTTEEEEGGGTTTCCCC
T ss_pred EEEeecCCccCCcccccccee
Confidence 578999999986443 22445
No 46
>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=21.97 E-value=17 Score=18.16 Aligned_cols=21 Identities=24% Similarity=0.406 Sum_probs=15.7
Q ss_pred ccccccccc--cccceeeccCCC
Q 034621 8 DKEKEKVCK--RCKQTYTASSNS 28 (89)
Q Consensus 8 ~~~~~~~C~--~C~~~F~~~~N~ 28 (89)
..+....|. +|++.|....|.
T Consensus 14 ~gekpy~C~~~~C~k~F~~~~~L 36 (47)
T d1ncsa_ 14 MPDKTFECLFPGCTKTFKRRYNI 36 (47)
T ss_dssp ETTTEEECCCTTCCCEECSSSSH
T ss_pred cCCCCeECCcCCCCccccCchHH
Confidence 445677895 499999987763
No 47
>d1x3ha2 g.39.1.3 (A:43-74) Leupaxin {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.49 E-value=16 Score=17.33 Aligned_cols=10 Identities=30% Similarity=0.992 Sum_probs=8.3
Q ss_pred ccccccceee
Q 034621 14 VCKRCKQTYT 23 (89)
Q Consensus 14 ~C~~C~~~F~ 23 (89)
+|..|.+.|.
T Consensus 1 VC~~C~~PF~ 10 (32)
T d1x3ha2 1 VCGDCFTSFS 10 (32)
T ss_dssp BCSSSCCBSC
T ss_pred CcCccCCcCC
Confidence 5888999995
Done!