BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034623
(89 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3H2Q|A Chain A, Human Sod1 H80r Variant, P21 Crystal Form
pdb|3H2Q|B Chain B, Human Sod1 H80r Variant, P21 Crystal Form
pdb|3H2Q|C Chain C, Human Sod1 H80r Variant, P21 Crystal Form
pdb|3H2Q|D Chain D, Human Sod1 H80r Variant, P21 Crystal Form
Length = 153
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ ++V D ++EDS + GD C++ RTL
Sbjct: 60 AGPHFNPLSRKHGGPKDEERRVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVV 119
Query: 78 H 78
H
Sbjct: 120 H 120
>pdb|2ZKY|A Chain A, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|B Chain B, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|C Chain C, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|D Chain D, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|E Chain E, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|F Chain F, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|G Chain G, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|H Chain H, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|I Chain I, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|J Chain J, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
Length = 159
Score = 29.6 bits (65), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD C++ RTL
Sbjct: 66 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDAVADVSIEDSVISLSGDHCIIGRTLVV 125
Query: 78 H 78
H
Sbjct: 126 H 126
>pdb|2ZKW|A Chain A, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group P21
pdb|2ZKW|B Chain B, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group P21
pdb|2ZKX|A Chain A, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
pdb|2ZKX|B Chain B, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
pdb|2ZKX|C Chain C, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
pdb|2ZKX|D Chain D, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
Length = 159
Score = 29.6 bits (65), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD C++ RTL
Sbjct: 66 AGPHFNPLSRKHGGPKDEERHVGDLRNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVV 125
Query: 78 H 78
H
Sbjct: 126 H 126
>pdb|2VR7|A Chain A, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.58 A Resolution
pdb|2VR7|F Chain F, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.58 A Resolution
Length = 154
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD C++ RTL
Sbjct: 61 AGPHFNPLSRKHGGPKDEERHVGDLRNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVV 120
Query: 78 H 78
H
Sbjct: 121 H 121
>pdb|3H2P|A Chain A, Human Sod1 D124v Variant
pdb|3H2P|B Chain B, Human Sod1 D124v Variant
Length = 153
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD C++ RTL
Sbjct: 60 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVV 119
Query: 78 H 78
H
Sbjct: 120 H 120
>pdb|2VR6|A Chain A, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.3 A Resolution
pdb|2VR6|F Chain F, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.3 A Resolution
pdb|3CQP|A Chain A, Human Sod1 G85r Variant, Structure I
pdb|3CQP|B Chain B, Human Sod1 G85r Variant, Structure I
pdb|3CQP|C Chain C, Human Sod1 G85r Variant, Structure I
pdb|3CQP|D Chain D, Human Sod1 G85r Variant, Structure I
Length = 153
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD C++ RTL
Sbjct: 60 AGPHFNPLSRKHGGPKDEERHVGDLRNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVV 119
Query: 78 H 78
H
Sbjct: 120 H 120
>pdb|1AZV|A Chain A, Familial Als Mutant G37r Cuznsod (Human)
pdb|1AZV|B Chain B, Familial Als Mutant G37r Cuznsod (Human)
Length = 153
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD C++ RTL
Sbjct: 60 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVV 119
Query: 78 H 78
H
Sbjct: 120 H 120
>pdb|3ECW|A Chain A, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECW|B Chain B, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECW|C Chain C, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECW|D Chain D, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
Length = 153
Score = 29.6 bits (65), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD C++ RTL
Sbjct: 60 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVV 119
Query: 78 H 78
H
Sbjct: 120 H 120
>pdb|1UXM|A Chain A, A4v Mutant Of Human Sod1
pdb|1UXM|B Chain B, A4v Mutant Of Human Sod1
pdb|1UXM|C Chain C, A4v Mutant Of Human Sod1
pdb|1UXM|D Chain D, A4v Mutant Of Human Sod1
pdb|1UXM|E Chain E, A4v Mutant Of Human Sod1
pdb|1UXM|F Chain F, A4v Mutant Of Human Sod1
pdb|1UXM|G Chain G, A4v Mutant Of Human Sod1
pdb|1UXM|H Chain H, A4v Mutant Of Human Sod1
pdb|1UXM|I Chain I, A4v Mutant Of Human Sod1
pdb|1UXM|J Chain J, A4v Mutant Of Human Sod1
pdb|1UXM|K Chain K, A4v Mutant Of Human Sod1
pdb|1UXM|L Chain L, A4v Mutant Of Human Sod1
Length = 153
Score = 29.6 bits (65), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD C++ RTL
Sbjct: 60 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVV 119
Query: 78 H 78
H
Sbjct: 120 H 120
>pdb|3GZQ|A Chain A, Human Sod1 A4v Metal-Free Variant
pdb|3GZQ|B Chain B, Human Sod1 A4v Metal-Free Variant
Length = 154
Score = 29.6 bits (65), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD C++ RTL
Sbjct: 61 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVV 120
Query: 78 H 78
H
Sbjct: 121 H 121
>pdb|4B3E|A Chain A, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|B Chain B, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|C Chain C, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|D Chain D, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|E Chain E, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|F Chain F, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|G Chain G, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|H Chain H, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|I Chain I, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|J Chain J, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate
Length = 154
Score = 29.6 bits (65), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD C++ RTL
Sbjct: 61 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVV 120
Query: 78 H 78
H
Sbjct: 121 H 121
>pdb|3GZP|A Chain A, Human Sod1 G93a Metal-Free Variant
pdb|3GZP|B Chain B, Human Sod1 G93a Metal-Free Variant
pdb|3GZP|C Chain C, Human Sod1 G93a Metal-Free Variant
pdb|3GZP|D Chain D, Human Sod1 G93a Metal-Free Variant
pdb|2WZ6|A Chain A, G93a Sod1 Mutant Complexed With Quinazoline.
pdb|2WZ6|F Chain F, G93a Sod1 Mutant Complexed With Quinazoline
Length = 153
Score = 29.6 bits (65), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD C++ RTL
Sbjct: 60 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDAVADVSIEDSVISLSGDHCIIGRTLVV 119
Query: 78 H 78
H
Sbjct: 120 H 120
>pdb|3GZO|A Chain A, Human Sod1 G93a Variant
pdb|3GZO|B Chain B, Human Sod1 G93a Variant
pdb|3GZO|C Chain C, Human Sod1 G93a Variant
pdb|3GZO|D Chain D, Human Sod1 G93a Variant
pdb|3GZO|E Chain E, Human Sod1 G93a Variant
pdb|3GZO|F Chain F, Human Sod1 G93a Variant
pdb|3GZO|G Chain G, Human Sod1 G93a Variant
pdb|3GZO|H Chain H, Human Sod1 G93a Variant
pdb|3GZO|I Chain I, Human Sod1 G93a Variant
pdb|3GZO|J Chain J, Human Sod1 G93a Variant
pdb|2WKO|A Chain A, Structure Of Metal Loaded Pathogenic Sod1 Mutant G93a
Length = 154
Score = 29.6 bits (65), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD C++ RTL
Sbjct: 61 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDAVADVSIEDSVISLSGDHCIIGRTLVV 120
Query: 78 H 78
H
Sbjct: 121 H 121
>pdb|2WYT|A Chain A, 1.0 A Resolution Structure Of L38v Sod1 Mutant
pdb|2WYT|F Chain F, 1.0 A Resolution Structure Of L38v Sod1 Mutant
pdb|2WZ0|A Chain A, L38v Sod1 Mutant Complexed With Aniline.
pdb|2WZ0|F Chain F, L38v Sod1 Mutant Complexed With Aniline.
pdb|2WZ5|A Chain A, L38v Sod1 Mutant Complexed With L-Methionine.
pdb|2WZ5|F Chain F, L38v Sod1 Mutant Complexed With L-Methionine
Length = 153
Score = 29.6 bits (65), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD C++ RTL
Sbjct: 60 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVV 119
Query: 78 H 78
H
Sbjct: 120 H 120
>pdb|1HL4|A Chain A, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL4|B Chain B, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL4|C Chain C, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL4|D Chain D, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1SPD|A Chain A, Amyotrophic Lateral Sclerosis And Structural Defects In
Cu,Zn Superoxide Dismutase
pdb|1SPD|B Chain B, Amyotrophic Lateral Sclerosis And Structural Defects In
Cu,Zn Superoxide Dismutase
Length = 154
Score = 29.6 bits (65), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD C++ RTL
Sbjct: 61 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVV 120
Query: 78 H 78
H
Sbjct: 121 H 121
>pdb|1HL5|A Chain A, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|B Chain B, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|C Chain C, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|D Chain D, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|E Chain E, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|F Chain F, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|G Chain G, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|H Chain H, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|I Chain I, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|J Chain J, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|K Chain K, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|L Chain L, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|M Chain M, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|N Chain N, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|O Chain O, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|P Chain P, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|Q Chain Q, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|S Chain S, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1PU0|A Chain A, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|B Chain B, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|C Chain C, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|D Chain D, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|E Chain E, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|F Chain F, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|G Chain G, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|H Chain H, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|I Chain I, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|J Chain J, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|2C9U|A Chain A, 1.24 Angstroms Resolution Structure Of As-Isolated Cu-Zn
Human Superoxide Dismutase
pdb|2C9U|F Chain F, 1.24 Angstroms Resolution Structure Of As-Isolated Cu-Zn
Human Superoxide Dismutase
pdb|2C9V|A Chain A, Atomic Resolution Structure Of Cu-Zn Human Superoxide
Dismutase
pdb|2C9V|F Chain F, Atomic Resolution Structure Of Cu-Zn Human Superoxide
Dismutase
pdb|2V0A|A Chain A, Atomic Resolution Crystal Structure Of Human Superoxide
Dismutase
pdb|2V0A|F Chain F, Atomic Resolution Crystal Structure Of Human Superoxide
Dismutase
pdb|3ECU|A Chain A, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3ECU|B Chain B, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3ECU|C Chain C, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3ECU|D Chain D, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3KH3|A Chain A, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|B Chain B, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|C Chain C, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|D Chain D, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|E Chain E, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|F Chain F, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|G Chain G, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|H Chain H, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|I Chain I, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|J Chain J, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|K Chain K, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|L Chain L, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH4|A Chain A, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|B Chain B, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|C Chain C, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|D Chain D, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|E Chain E, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|F Chain F, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3RE0|A Chain A, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
pdb|3RE0|B Chain B, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
pdb|3RE0|C Chain C, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
pdb|3RE0|D Chain D, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
Length = 153
Score = 29.6 bits (65), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD C++ RTL
Sbjct: 60 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVV 119
Query: 78 H 78
H
Sbjct: 120 H 120
>pdb|1OEZ|W Chain W, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OEZ|X Chain X, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OEZ|Y Chain Y, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OEZ|Z Chain Z, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OZT|M Chain M, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|N Chain N, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|G Chain G, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|H Chain H, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|K Chain K, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|L Chain L, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|I Chain I, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|J Chain J, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
Length = 153
Score = 29.6 bits (65), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD C++ RTL
Sbjct: 60 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVV 119
Query: 78 H 78
H
Sbjct: 120 H 120
>pdb|3GQF|A Chain A, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|B Chain B, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|C Chain C, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|D Chain D, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|E Chain E, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|F Chain F, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3K91|A Chain A, Polysulfane Bridge In Cu-Zn Superoxide Dismutase
pdb|3K91|B Chain B, Polysulfane Bridge In Cu-Zn Superoxide Dismutase
Length = 153
Score = 29.6 bits (65), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD C++ RTL
Sbjct: 60 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVV 119
Query: 78 H 78
H
Sbjct: 120 H 120
>pdb|2NNX|A Chain A, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
pdb|2NNX|B Chain B, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
pdb|2NNX|C Chain C, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
pdb|2NNX|D Chain D, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
Length = 154
Score = 29.6 bits (65), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD C++ RTL
Sbjct: 61 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVV 120
Query: 78 H 78
H
Sbjct: 121 H 121
>pdb|1UXL|A Chain A, I113t Mutant Of Human Sod1
pdb|1UXL|B Chain B, I113t Mutant Of Human Sod1
pdb|1UXL|C Chain C, I113t Mutant Of Human Sod1
pdb|1UXL|D Chain D, I113t Mutant Of Human Sod1
pdb|1UXL|E Chain E, I113t Mutant Of Human Sod1
pdb|1UXL|F Chain F, I113t Mutant Of Human Sod1
pdb|1UXL|G Chain G, I113t Mutant Of Human Sod1
pdb|1UXL|H Chain H, I113t Mutant Of Human Sod1
pdb|1UXL|I Chain I, I113t Mutant Of Human Sod1
pdb|1UXL|J Chain J, I113t Mutant Of Human Sod1
pdb|3ECV|A Chain A, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECV|B Chain B, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECV|C Chain C, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECV|D Chain D, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|4A7G|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With 4-
Methylpiperazin-1-Yl)quinazoline In The P21 Space Group.
pdb|4A7Q|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With 4-(4-
Methyl-1,4-Diazepan-1-Yl)quinazoline In The P21 Space
Group.
pdb|4A7Q|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With 4-(4-
Methyl-1,4-Diazepan-1-Yl)quinazoline In The P21 Space
Group.
pdb|4A7S|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With 5-
Fluorouridine In The P21 Space Group
pdb|4A7S|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With 5-
Fluorouridine In The P21 Space Group
pdb|4A7T|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With
Isoproteranol In The P21 Space Group
pdb|4A7T|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With
Isoproteranol In The P21 Space Group
pdb|4A7U|A Chain A, Structure Of Human I113t Sod1 Complexed With Adrenaline In
The P21 Space Group.
pdb|4A7U|F Chain F, Structure Of Human I113t Sod1 Complexed With Adrenaline In
The P21 Space Group.
pdb|4A7V|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With
Dopamine In The P21 Space Group
pdb|4A7V|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With
Dopamine In The P21 Space Group
Length = 153
Score = 28.5 bits (62), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD C+ RTL
Sbjct: 60 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCITGRTLVV 119
Query: 78 H 78
H
Sbjct: 120 H 120
>pdb|3LTV|A Chain A, Mouse-Human Sod1 Chimera
pdb|3LTV|B Chain B, Mouse-Human Sod1 Chimera
pdb|3LTV|C Chain C, Mouse-Human Sod1 Chimera
pdb|3LTV|D Chain D, Mouse-Human Sod1 Chimera
pdb|3LTV|E Chain E, Mouse-Human Sod1 Chimera
pdb|3LTV|F Chain F, Mouse-Human Sod1 Chimera
Length = 153
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 54 DQTVEDSCDGVEGDDCLMRRTLAAH 78
D ++EDS + GD C++ RTL H
Sbjct: 96 DVSIEDSVISLSGDHCIIGRTLVVH 120
>pdb|4A7G|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With 4-
Methylpiperazin-1-Yl)quinazoline In The P21 Space Group
Length = 153
Score = 27.3 bits (59), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D + EDS + GD C+ RTL
Sbjct: 60 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSTEDSVISLSGDHCITGRTLVV 119
Query: 78 H 78
H
Sbjct: 120 H 120
>pdb|1TMO|A Chain A, Trimethylamine N-Oxide Reductase From Shewanella Massilia
Length = 829
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 34 PDVTPLKNLHGDVEEATKKVDQTVEDSCDG 63
P++ PL G +E ++K+DQ D C G
Sbjct: 625 PEINPLGTPSGLIEIFSRKIDQFGYDDCKG 654
>pdb|2GBU|A Chain A, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBU|B Chain B, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBU|C Chain C, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBU|D Chain D, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBV|A Chain A, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|B Chain B, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|C Chain C, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|D Chain D, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|E Chain E, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|F Chain F, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|G Chain G, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|H Chain H, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|I Chain I, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|J Chain J, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
Length = 153
Score = 26.6 bits (57), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD ++ RTL
Sbjct: 60 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVV 119
Query: 78 H 78
H
Sbjct: 120 H 120
>pdb|3QQD|A Chain A, Human Sod1 H80r Variant, P212121 Crystal Form
pdb|3QQD|B Chain B, Human Sod1 H80r Variant, P212121 Crystal Form
Length = 154
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ ++V D ++EDS + GD ++ RTL
Sbjct: 61 AGPHFNPLSRKHGGPKDEERRVGDLGNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVV 120
Query: 78 H 78
H
Sbjct: 121 H 121
>pdb|2R27|A Chain A, Constitutively Zinc-Deficient Mutant Of Human Superoxide
Dismutase (Sod), C6a, H80s, H83s, C111s
pdb|2R27|B Chain B, Constitutively Zinc-Deficient Mutant Of Human Superoxide
Dismutase (Sod), C6a, H80s, H83s, C111s
Length = 154
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD ++ RTL
Sbjct: 61 AGPHFNPLSRKHGGPKDEERSVGSLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVV 120
Query: 78 H 78
H
Sbjct: 121 H 121
>pdb|2GBT|A Chain A, C6aC111A CUZN SUPEROXIDE DISMUTASE
pdb|2GBT|B Chain B, C6aC111A CUZN SUPEROXIDE DISMUTASE
pdb|2GBT|C Chain C, C6aC111A CUZN SUPEROXIDE DISMUTASE
pdb|2GBT|D Chain D, C6aC111A CUZN SUPEROXIDE DISMUTASE
Length = 153
Score = 26.2 bits (56), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD ++ RTL
Sbjct: 60 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVV 119
Query: 78 H 78
H
Sbjct: 120 H 120
>pdb|4BCY|A Chain A, Monomeric Human Cu,zn Superoxide Dismutase, Mutation H43f
Length = 153
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD ++ RTL
Sbjct: 60 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVV 119
Query: 78 H 78
H
Sbjct: 120 H 120
>pdb|1SOS|A Chain A, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|F Chain F, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|B Chain B, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|G Chain G, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|C Chain C, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|H Chain H, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|D Chain D, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|I Chain I, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|E Chain E, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|J Chain J, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
Length = 154
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD ++ RTL
Sbjct: 61 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVV 120
Query: 78 H 78
H
Sbjct: 121 H 121
>pdb|1L3N|A Chain A, The Solution Structure Of Reduced Dimeric Copper Zinc Sod:
The Structural Effects Of Dimerization
pdb|1L3N|B Chain B, The Solution Structure Of Reduced Dimeric Copper Zinc Sod:
The Structural Effects Of Dimerization
pdb|2AF2|A Chain A, Solution Structure Of Disulfide Reduced And Copper
Depleted Human Superoxide Dismutase
pdb|2AF2|B Chain B, Solution Structure Of Disulfide Reduced And Copper
Depleted Human Superoxide Dismutase
pdb|2LU5|A Chain A, Structure And Chemical Shifts Of Cu(I),Zn(Ii) Superoxide
Dismutase By Solid-State Nmr
Length = 153
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD ++ RTL
Sbjct: 60 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVV 119
Query: 78 H 78
H
Sbjct: 120 H 120
>pdb|2XJK|A Chain A, Monomeric Human Cu,Zn Superoxide Dismutase
Length = 153
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD ++ RTL
Sbjct: 60 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVV 119
Query: 78 H 78
H
Sbjct: 120 H 120
>pdb|1PTZ|A Chain A, Crystal Structure Of The Human Cu, Zn Superoxide
Dismutase, Familial Amyotrophic Lateral Sclerosis (Fals)
Mutant H43r
pdb|1PTZ|B Chain B, Crystal Structure Of The Human Cu, Zn Superoxide
Dismutase, Familial Amyotrophic Lateral Sclerosis (Fals)
Mutant H43r
Length = 153
Score = 26.2 bits (56), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD ++ RTL
Sbjct: 60 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVV 119
Query: 78 H 78
H
Sbjct: 120 H 120
>pdb|1N19|A Chain A, Structure Of The Hsod A4v Mutant
pdb|1N19|B Chain B, Structure Of The Hsod A4v Mutant
Length = 154
Score = 26.2 bits (56), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD ++ RTL
Sbjct: 61 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVV 120
Query: 78 H 78
H
Sbjct: 121 H 121
>pdb|1N18|A Chain A, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|B Chain B, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|C Chain C, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|D Chain D, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|E Chain E, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|F Chain F, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|G Chain G, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|H Chain H, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|I Chain I, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|J Chain J, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
Length = 154
Score = 26.2 bits (56), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD ++ RTL
Sbjct: 61 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVV 120
Query: 78 H 78
H
Sbjct: 121 H 121
>pdb|1QMB|A Chain A, Cleaved Alpha-1-Antitrypsin Polymer
Length = 326
Score = 26.2 bits (56), Expect = 5.1, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 44 GDVEEATKKVDQTVEDSCDG--VEGDDCLMRRTLAAHIDYIY 83
GD EEA K+++ VE G V+ L R T+ A ++YI+
Sbjct: 123 GDTEEAKKQINDYVEKGTQGKIVDLVKELDRDTVFALVNYIF 164
>pdb|1MFM|A Chain A, Monomeric Human Sod Mutant F50eG51EE133Q AT ATOMIC
Resolution
pdb|1KMG|A Chain A, The Solution Structure Of Monomeric Copper-Free Superoxide
Dismutase
pdb|1RK7|A Chain A, Solution Structure Of Apo Cu,Zn Superoxide Dismutase: Role
Of Metal Ions In Protein Folding
Length = 153
Score = 26.2 bits (56), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD ++ RTL
Sbjct: 60 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVV 119
Query: 78 H 78
H
Sbjct: 120 H 120
>pdb|1BA9|A Chain A, The Solution Structure Of Reduced Monomeric Superoxide
Dismutase, Nmr, 36 Structures
Length = 153
Score = 26.2 bits (56), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD ++ RTL
Sbjct: 60 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVV 119
Query: 78 H 78
H
Sbjct: 120 H 120
>pdb|1FUN|A Chain A, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|F Chain F, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|B Chain B, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|G Chain G, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|C Chain C, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|H Chain H, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|D Chain D, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|I Chain I, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|E Chain E, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|J Chain J, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
Length = 153
Score = 26.2 bits (56), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD ++ RTL
Sbjct: 60 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVV 119
Query: 78 H 78
H
Sbjct: 120 H 120
>pdb|1EZX|A Chain A, Crystal Structure Of A Serpin:protease Complex
Length = 335
Score = 26.2 bits (56), Expect = 5.2, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 44 GDVEEATKKVDQTVEDSCDG--VEGDDCLMRRTLAAHIDYIY 83
GD EEA K+++ VE G V+ L R T+ A ++YI+
Sbjct: 125 GDTEEAKKQINDYVEKGTQGKIVDLVKELDRDTVFALVNYIF 166
>pdb|1D5S|A Chain A, Crystal Structure Of Cleaved Antitrypsin Polymer
Length = 334
Score = 26.2 bits (56), Expect = 5.2, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 44 GDVEEATKKVDQTVEDSCDG--VEGDDCLMRRTLAAHIDYIY 83
GD EEA K+++ VE G V+ L R T+ A ++YI+
Sbjct: 129 GDTEEAKKQINDYVEKGTQGKIVDLVKELDRDTVFALVNYIF 170
>pdb|1ATU|A Chain A, Uncleaved Alpha-1-Antitrypsin
Length = 374
Score = 26.2 bits (56), Expect = 5.3, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 44 GDVEEATKKVDQTVEDSCDG--VEGDDCLMRRTLAAHIDYIY 83
GD EEA K+++ VE G V+ L R T+ A ++YI+
Sbjct: 128 GDTEEAKKQINDYVEKGTQGKIVDLVKELDRDTVFALVNYIF 169
>pdb|3T1P|A Chain A, Crystal Structure Of An Alpha-1-Antitrypsin Trimer
Length = 371
Score = 26.2 bits (56), Expect = 5.6, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 44 GDVEEATKKVDQTVEDSCDG--VEGDDCLMRRTLAAHIDYIY 83
GD EEA K+++ VE G V+ L R T+ A ++YI+
Sbjct: 125 GDTEEAKKQINDYVEKGTQGKIVDLVKELDRDTVFALVNYIF 166
>pdb|1DSW|A Chain A, The Solution Structure Of A Monomeric, Reduced Form Of
Human Copper, Zinc Superoxide Dismutase Bearing The Same
Charge As The Native Protein
Length = 153
Score = 26.2 bits (56), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD ++ RTL
Sbjct: 60 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVV 119
Query: 78 H 78
H
Sbjct: 120 H 120
>pdb|3NDF|A Chain A, Cleaved Antitrypsin With P8-P6 Asp
Length = 343
Score = 25.8 bits (55), Expect = 6.2, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 44 GDVEEATKKVDQTVEDSCDG--VEGDDCLMRRTLAAHIDYIY 83
GD EEA K+++ VE G V+ L R T+ A ++YI+
Sbjct: 133 GDTEEAKKQINDYVEKGTQGKIVDLVKELDRDTVFALVNYIF 174
>pdb|3KYH|C Chain C, Saccharomyces Cerevisiae Cet1-Ceg1 Capping Apparatus
pdb|3KYH|D Chain D, Saccharomyces Cerevisiae Cet1-Ceg1 Capping Apparatus
Length = 461
Score = 25.8 bits (55), Expect = 6.3, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 28 RPEPAFPDVTPLKNLHGDVEEATKKVDQTVEDSCDGV 64
+P FP P+ H DVEE D V + DG+
Sbjct: 40 KPTKTFPGSQPVSFQHSDVEEKLLAHDYYVCEKTDGL 76
>pdb|7API|A Chain A, The S Variant Of Human Alpha1-Antitrypsin, Structure And
Implications For Function And Metabolism
pdb|8API|A Chain A, The S Variant Of Human Alpha1-antitrypsin, Structure And
Implications For Function And Metabolism
pdb|9API|A Chain A, The S Variant Of Human Alpha1-Antitrypsin, Structure And
Implications For Function And Metabolism
Length = 347
Score = 25.8 bits (55), Expect = 6.5, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 44 GDVEEATKKVDQTVEDSCDG--VEGDDCLMRRTLAAHIDYIY 83
GD EEA K+++ VE G V+ L R T+ A ++YI+
Sbjct: 137 GDTEEAKKQINDYVEKGTQGKIVDLVKELDRDTVFALVNYIF 178
>pdb|3NE4|A Chain A, 1.8 Angstrom Structure Of Intact Native Wild-Type
Alpha-1-Antitrypsin
Length = 424
Score = 25.8 bits (55), Expect = 6.7, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 44 GDVEEATKKVDQTVEDSCDG--VEGDDCLMRRTLAAHIDYIY 83
GD EEA K+++ VE G V+ L R T+ A ++YI+
Sbjct: 178 GDTEEAKKQINDYVEKGTQGKIVDLVKELDRDTVFALVNYIF 219
>pdb|3NDD|A Chain A, Cleaved Antitrypsin With P10 Pro, And P9-P6 Asp
Length = 343
Score = 25.8 bits (55), Expect = 7.0, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 44 GDVEEATKKVDQTVEDSCDG--VEGDDCLMRRTLAAHIDYIY 83
GD EEA K+++ VE G V+ L R T+ A ++YI+
Sbjct: 133 GDTEEAKKQINDYVEKGTQGKIVDLVKELDRDTVFALVNYIF 174
>pdb|1OO8|A Chain A, Crystal Structure Of A1pi-Pittsburgh In The Native
Conformation
pdb|1OPH|A Chain A, Non-Covalent Complex Between Alpha-1-Pi-Pittsburgh And
S195a Trypsin
Length = 394
Score = 25.8 bits (55), Expect = 7.3, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 44 GDVEEATKKVDQTVEDSCDG--VEGDDCLMRRTLAAHIDYIY 83
GD EEA K+++ VE G V+ L R T+ A ++YI+
Sbjct: 148 GDTEEAKKQINDYVEKGTQGKIVDLVKELDRDTVFALVNYIF 189
>pdb|3DRM|A Chain A, 2.2 Angstrom Crystal Structure Of Thr114phe Alpha1-
Antitrypsin
Length = 404
Score = 25.8 bits (55), Expect = 7.3, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 44 GDVEEATKKVDQTVEDSCDG--VEGDDCLMRRTLAAHIDYIY 83
GD EEA K+++ VE G V+ L R T+ A ++YI+
Sbjct: 158 GDTEEAKKQINDYVEKGTQGKIVDLVKELDRDTVFALVNYIF 199
>pdb|1P1V|A Chain A, Crystal Structure Of Fals-Associated Human Copper-Zinc
Superoxide Dismutase (Cuznsod) Mutant D125h To 1.4a
pdb|1P1V|B Chain B, Crystal Structure Of Fals-Associated Human Copper-Zinc
Superoxide Dismutase (Cuznsod) Mutant D125h To 1.4a
pdb|1P1V|C Chain C, Crystal Structure Of Fals-Associated Human Copper-Zinc
Superoxide Dismutase (Cuznsod) Mutant D125h To 1.4a
Length = 153
Score = 25.8 bits (55), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD ++ RTL
Sbjct: 60 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVV 119
Query: 78 H 78
H
Sbjct: 120 H 120
>pdb|1KCT|A Chain A, Alpha1-Antitrypsin
Length = 394
Score = 25.8 bits (55), Expect = 7.4, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 44 GDVEEATKKVDQTVEDSCDG--VEGDDCLMRRTLAAHIDYIY 83
GD EEA K+++ VE G V+ L R T+ A ++YI+
Sbjct: 148 GDTEEAKKQINDYVEKGTQGKIVDLVKELDRDTVFALVNYIF 189
>pdb|2D26|A Chain A, Active Site Distortion Is Sufficient For Proteinase
Inhibit Second Crystal Structure Of Covalent
Serpin-Proteinase Complex
Length = 358
Score = 25.8 bits (55), Expect = 7.4, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 44 GDVEEATKKVDQTVEDSCDG--VEGDDCLMRRTLAAHIDYIY 83
GD EEA K+++ VE G V+ L R T+ A ++YI+
Sbjct: 148 GDTEEAKKQINDYVEKGTQGKIVDLVKELDRDTVFALVNYIF 189
>pdb|3DRU|A Chain A, Crystal Structure Of Gly117phe Alpha1-Antitrypsin
pdb|3DRU|B Chain B, Crystal Structure Of Gly117phe Alpha1-Antitrypsin
pdb|3DRU|C Chain C, Crystal Structure Of Gly117phe Alpha1-Antitrypsin
Length = 404
Score = 25.4 bits (54), Expect = 7.6, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 44 GDVEEATKKVDQTVEDSCDG--VEGDDCLMRRTLAAHIDYIY 83
GD EEA K+++ VE G V+ L R T+ A ++YI+
Sbjct: 158 GDTEEAKKQINDYVEKGTQGKIVDLVKELDRDTVFALVNYIF 199
>pdb|1QLP|A Chain A, 2.0 Angstrom Structure Of Intact Alpha-1-Antitrypsin: A
Canonical Template For Active Serpins
Length = 394
Score = 25.4 bits (54), Expect = 7.7, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 44 GDVEEATKKVDQTVEDSCDG--VEGDDCLMRRTLAAHIDYIY 83
GD EEA K+++ VE G V+ L R T+ A ++YI+
Sbjct: 148 GDTEEAKKQINDYVEKGTQGKIVDLVKELDRDTVFALVNYIF 189
>pdb|1IZ2|A Chain A, Interactions Causing The Kinetic Trap In Serpin Protein
Folding
Length = 394
Score = 25.4 bits (54), Expect = 7.8, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 44 GDVEEATKKVDQTVEDSCDG--VEGDDCLMRRTLAAHIDYIY 83
GD EEA K+++ VE G V+ L R T+ A ++YI+
Sbjct: 148 GDTEEAKKQINDYVEKGTQGKIVDLVKELDRDTVFALVNYIF 189
>pdb|1PSI|A Chain A, Intact Recombined Alpha1-Antitrypsin Mutant Phe 51 To Leu
Length = 394
Score = 25.4 bits (54), Expect = 7.8, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 44 GDVEEATKKVDQTVEDSCDG--VEGDDCLMRRTLAAHIDYIY 83
GD EEA K+++ VE G V+ L R T+ A ++YI+
Sbjct: 148 GDTEEAKKQINDYVEKGTQGKIVDLVKELDRDTVFALVNYIF 189
>pdb|2VR8|A Chain A, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.36 A Resolution
pdb|2VR8|F Chain F, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.36 A Resolution
Length = 154
Score = 25.4 bits (54), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD ++ RTL
Sbjct: 61 AGPHFNPLSRKHGGPKDEERHVGDLRNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVV 120
Query: 78 H 78
H
Sbjct: 121 H 121
>pdb|3CQQ|A Chain A, Human Sod1 G85r Variant, Structure Ii
pdb|3CQQ|B Chain B, Human Sod1 G85r Variant, Structure Ii
Length = 153
Score = 25.4 bits (54), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD ++ RTL
Sbjct: 60 AGPHFNPLSRKHGGPKDEERHVGDLRNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVV 119
Query: 78 H 78
H
Sbjct: 120 H 120
>pdb|2WYZ|A Chain A, L38v Sod1 Mutant Complexed With Ump
pdb|2WYZ|F Chain F, L38v Sod1 Mutant Complexed With Ump
Length = 153
Score = 25.4 bits (54), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD ++ RTL
Sbjct: 60 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVV 119
Query: 78 H 78
H
Sbjct: 120 H 120
>pdb|2C9S|A Chain A, 1.24 Angstroms Resolution Structure Of Zn-Zn Human
Superoxide Dismutase
pdb|2C9S|F Chain F, 1.24 Angstroms Resolution Structure Of Zn-Zn Human
Superoxide Dismutase
pdb|3T5W|A Chain A, 2me Modified Human Sod1
pdb|3T5W|B Chain B, 2me Modified Human Sod1
pdb|3T5W|D Chain D, 2me Modified Human Sod1
pdb|3T5W|E Chain E, 2me Modified Human Sod1
pdb|3T5W|F Chain F, 2me Modified Human Sod1
pdb|3T5W|G Chain G, 2me Modified Human Sod1
pdb|3T5W|H Chain H, 2me Modified Human Sod1
pdb|3T5W|I Chain I, 2me Modified Human Sod1
pdb|3T5W|J Chain J, 2me Modified Human Sod1
pdb|3T5W|K Chain K, 2me Modified Human Sod1
pdb|3T5W|L Chain L, 2me Modified Human Sod1
pdb|3T5W|M Chain M, 2me Modified Human Sod1
Length = 153
Score = 25.4 bits (54), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD ++ RTL
Sbjct: 60 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVV 119
Query: 78 H 78
H
Sbjct: 120 H 120
>pdb|1OZU|A Chain A, Crystal Structure Of Familial Als Mutant S134n Of Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 1.3a Resolution
pdb|1OZU|B Chain B, Crystal Structure Of Familial Als Mutant S134n Of Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 1.3a Resolution
Length = 153
Score = 25.4 bits (54), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD ++ RTL
Sbjct: 60 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVV 119
Query: 78 H 78
H
Sbjct: 120 H 120
>pdb|2WKO|F Chain F, Structure Of Metal Loaded Pathogenic Sod1 Mutant G93a
Length = 154
Score = 25.4 bits (54), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 14/61 (22%)
Query: 32 AFPDVTPLKNLHGDVEEATKKV--------------DQTVEDSCDGVEGDDCLMRRTLAA 77
A P PL HG ++ + V D ++EDS + GD ++ RTL
Sbjct: 61 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDAVADVSIEDSVISLSGDHXIIGRTLVV 120
Query: 78 H 78
H
Sbjct: 121 H 121
>pdb|2QUG|A Chain A, Crystal Structure Of Alpha-1-Antitrypsin, Crystal Form A
pdb|3CWL|A Chain A, Crystal Structure Of Alpha-1-Antitrypsin, Crystal Form B
pdb|3CWM|A Chain A, Crystal Structure Of Alpha-1-Antitrypsin Complexed With
Citrate
Length = 394
Score = 25.4 bits (54), Expect = 8.2, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 44 GDVEEATKKVDQTVEDSCDG--VEGDDCLMRRTLAAHIDYIY 83
GD EEA K+++ VE G V+ L R T+ A ++YI+
Sbjct: 148 GDTEEAKKQINDYVEKGTQGKIVDLVKELDRDTVFALVNYIF 189
>pdb|1HP7|A Chain A, A 2.1 Angstrom Structure Of An Uncleaved
Alpha-1-Antitrypsin Shows Variability Of The Reactive
Center And Other Loops
Length = 394
Score = 25.4 bits (54), Expect = 8.3, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 44 GDVEEATKKVDQTVEDSCDG--VEGDDCLMRRTLAAHIDYIY 83
GD EEA K+++ VE G V+ L R T+ A ++YI+
Sbjct: 148 GDTEEAKKQINDYVEKGTQGKIVDLVKELDRDTVFALVNYIF 189
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.314 0.131 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,159,420
Number of Sequences: 62578
Number of extensions: 68895
Number of successful extensions: 171
Number of sequences better than 100.0: 68
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 141
Number of HSP's gapped (non-prelim): 68
length of query: 89
length of database: 14,973,337
effective HSP length: 56
effective length of query: 33
effective length of database: 11,468,969
effective search space: 378475977
effective search space used: 378475977
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 45 (21.9 bits)