Your job contains 1 sequence.
>034626
MWKLKQLVAGDEEREESFLEDESDGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRPI
KFAILFTFGNLLAVGSLRYRACSANKYDV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 034626
(89 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2151837 - symbol:AT5G24170 "AT5G24170" species... 189 6.9e-15 1
TAIR|locus:2171706 - symbol:AT5G23550 "AT5G23550" species... 160 8.2e-12 1
DICTYBASE|DDB_G0291055 - symbol:DDB_G0291055 "SFT2 family... 132 7.6e-09 1
UNIPROTKB|F1PKN6 - symbol:SFT2D2 "Uncharacterized protein... 107 3.4e-06 1
UNIPROTKB|O95562 - symbol:SFT2D2 "Vesicle transport prote... 104 7.0e-06 1
UNIPROTKB|Q5TIH2 - symbol:SFT2D2 "Vesicle transport prote... 104 7.0e-06 1
UNIPROTKB|F1RPV2 - symbol:SFT2D2 "Uncharacterized protein... 99 2.4e-05 1
UNIPROTKB|F6RF48 - symbol:SFT2D2 "Uncharacterized protein... 98 3.0e-05 1
MGI|MGI:1917362 - symbol:Sft2d2 "SFT2 domain containing 2... 96 5.0e-05 1
RGD|1310623 - symbol:Sft2d2 "SFT2 domain containing 2" sp... 95 6.3e-05 1
POMBASE|SPAC1527.02 - symbol:sft2 "Golgi transport protei... 91 0.00039 1
ZFIN|ZDB-GENE-040426-1350 - symbol:sft2d1 "SFT2 domain co... 88 0.00043 1
UNIPROTKB|E1C5F8 - symbol:SFT2D1 "Uncharacterized protein... 87 0.00045 1
UNIPROTKB|F1NPE6 - symbol:SFT2D1 "Uncharacterized protein... 87 0.00047 1
>TAIR|locus:2151837 [details] [associations]
symbol:AT5G24170 "AT5G24170" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0006810
"transport" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006661 "phosphatidylinositol biosynthetic
process" evidence=RCA] InterPro:IPR007305 InterPro:IPR011691
Pfam:PF04178 GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0016192 eggNOG:NOG263508 HOGENOM:HOG000017959
PANTHER:PTHR23137 OMA:IIFCILQ EMBL:BT014940 EMBL:BT015632
IPI:IPI00542228 RefSeq:NP_197805.2 UniGene:At.43606
EnsemblPlants:AT5G24170.1 GeneID:832484 KEGG:ath:AT5G24170
TAIR:At5g24170 InParanoid:Q6GKX4 PhylomeDB:Q6GKX4
ProtClustDB:CLSN2681066 Genevestigator:Q6GKX4 Uniprot:Q6GKX4
Length = 163
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 37/55 (67%), Positives = 45/55 (81%)
Query: 25 GICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRPIKFAILFTFGNLLAVGSLRY 79
G+C+LS TQRMY FAA L GL+ MFLS+IVF PIKFA+LFTFGN+LA+GS +
Sbjct: 28 GLCALSTTQRMYGFAASLATGLLLMFLSMIVFGIPIKFALLFTFGNVLAIGSTAF 82
>TAIR|locus:2171706 [details] [associations]
symbol:AT5G23550 "AT5G23550" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006661 "phosphatidylinositol biosynthetic process"
evidence=RCA] [GO:0009086 "methionine biosynthetic process"
evidence=RCA] InterPro:IPR007305 InterPro:IPR011691 Pfam:PF04178
GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016192
EMBL:AB025633 UniGene:At.31002 eggNOG:NOG263508
HOGENOM:HOG000017959 PANTHER:PTHR23137 OMA:IGSTVFL EMBL:BT005168
EMBL:AK117540 IPI:IPI00522044 RefSeq:NP_197746.1 IntAct:Q9LT07
PaxDb:Q9LT07 EnsemblPlants:AT5G23550.1 GeneID:832421
KEGG:ath:AT5G23550 TAIR:At5g23550 InParanoid:Q9LT07
PhylomeDB:Q9LT07 ProtClustDB:CLSN2686291 ArrayExpress:Q9LT07
Genevestigator:Q9LT07 Uniprot:Q9LT07
Length = 175
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 29/53 (54%), Positives = 37/53 (69%)
Query: 27 CSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRPIKFAILFTFGNLLAVGSLRY 79
C+L+ QR Y FA CL AGL C LS++VF P+KF I FT GNL+A+GS +
Sbjct: 42 CALTTKQRFYGFAICLSAGLTCTLLSMLVFFNPVKFGITFTLGNLMALGSTAF 94
>DICTYBASE|DDB_G0291055 [details] [associations]
symbol:DDB_G0291055 "SFT2 family protein"
species:44689 "Dictyostelium discoideum" [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR007305 InterPro:IPR011691 Pfam:PF04178
dictyBase:DDB_G0291055 GO:GO:0016021 GO:GO:0016192
EMBL:AAFI02000174 eggNOG:NOG263508 PANTHER:PTHR23137
RefSeq:XP_635427.1 EnsemblProtists:DDB0219631 GeneID:8627928
KEGG:ddi:DDB_G0291055 InParanoid:Q54FB0 OMA:FIACFVV Uniprot:Q54FB0
Length = 158
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 27 CSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRPIKFAILFTFGNLLAV 74
CSL++TQR+ FA C GL+ FLS++ F+ P FA+LFT G++L V
Sbjct: 27 CSLTFTQRVIGFAVCAALGLLFAFLSLMFFISPTTFALLFTLGDILMV 74
>UNIPROTKB|F1PKN6 [details] [associations]
symbol:SFT2D2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR007305 InterPro:IPR011691 Pfam:PF04178 GO:GO:0016021
GO:GO:0016192 PANTHER:PTHR23137 GeneTree:ENSGT00390000018525
OMA:IGSTVFL EMBL:AAEX03005220 Ensembl:ENSCAFT00000024289
Uniprot:F1PKN6
Length = 140
Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 28 SLSYTQRMYAFAACLLAGLVCMFLSIIVFVRPIK----FAILFTFGNLLAVGS 76
SLS++ R+ F AC AG+VC L ++ P K FA+ +TFGN+ ++GS
Sbjct: 7 SLSWSTRIKGFIACFAAGIVCSLLGTLLLWVPRKGLYLFAVFYTFGNIASIGS 59
>UNIPROTKB|O95562 [details] [associations]
symbol:SFT2D2 "Vesicle transport protein SFT2B"
species:9606 "Homo sapiens" [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR007305 InterPro:IPR011691 Pfam:PF04178 GO:GO:0016021
GO:GO:0016192 GO:GO:0015031 EMBL:CH471067 eggNOG:NOG263508
HOGENOM:HOG000017959 HOVERGEN:HBG053306 PANTHER:PTHR23137
EMBL:AL035297 EMBL:AK290325 EMBL:AL009051 EMBL:BC068098
EMBL:AY358675 IPI:IPI00029002 RefSeq:NP_955376.1 UniGene:Hs.645435
ProteinModelPortal:O95562 PhosphoSite:O95562 PRIDE:O95562
DNASU:375035 Ensembl:ENST00000271375 GeneID:375035 KEGG:hsa:375035
UCSC:uc001gfi.4 CTD:375035 GeneCards:GC01P168195 HGNC:HGNC:25140
HPA:HPA042207 neXtProt:NX_O95562 PharmGKB:PA142670928
InParanoid:O95562 OMA:IGSTVFL GenomeRNAi:375035 NextBio:100385
ArrayExpress:O95562 Bgee:O95562 CleanEx:HS_SFT2D2
Genevestigator:O95562 GermOnline:ENSG00000143178 Uniprot:O95562
Length = 160
Score = 104 (41.7 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 25/80 (31%), Positives = 41/80 (51%)
Query: 1 MWKLKQLVAGXXXXXXXXXXXXXXGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRPI 60
M KLK++++G SLS++ R+ F AC G++C L ++ P
Sbjct: 1 MDKLKKVLSGQDTEDRSGLSEVVEA-SSLSWSTRIKGFIACFAIGILCSLLGTVLLWVPR 59
Query: 61 K----FAILFTFGNLLAVGS 76
K FA+ +TFGN+ ++GS
Sbjct: 60 KGLHLFAVFYTFGNIASIGS 79
>UNIPROTKB|Q5TIH2 [details] [associations]
symbol:SFT2D2 "Vesicle transport protein SFT2B"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] InterPro:IPR007305 InterPro:IPR011691 Pfam:PF04178
GO:GO:0016021 GO:GO:0016192 HOGENOM:HOG000017959 OrthoDB:EOG4WSWBV
PANTHER:PTHR23137 EMBL:AL009051 UniGene:Hs.645435 HGNC:HGNC:25140
IPI:IPI00515027 Ensembl:ENST00000367825 Ensembl:ENST00000367829
Uniprot:Q5TIH2
Length = 108
Score = 104 (41.7 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 25/80 (31%), Positives = 41/80 (51%)
Query: 1 MWKLKQLVAGXXXXXXXXXXXXXXGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRPI 60
M KLK++++G SLS++ R+ F AC G++C L ++ P
Sbjct: 1 MDKLKKVLSGQDTEDRSGLSEVVEA-SSLSWSTRIKGFIACFAIGILCSLLGTVLLWVPR 59
Query: 61 K----FAILFTFGNLLAVGS 76
K FA+ +TFGN+ ++GS
Sbjct: 60 KGLHLFAVFYTFGNIASIGS 79
>UNIPROTKB|F1RPV2 [details] [associations]
symbol:SFT2D2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016192 "vesicle-mediated transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR007305
InterPro:IPR011691 Pfam:PF04178 GO:GO:0016021 GO:GO:0016192
PANTHER:PTHR23137 GeneTree:ENSGT00390000018525 CTD:375035
OMA:IGSTVFL EMBL:CU151849 RefSeq:NP_001230577.1 UniGene:Ssc.47612
Ensembl:ENSSSCT00000006905 GeneID:100157189 KEGG:ssc:100157189
Uniprot:F1RPV2
Length = 159
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 26/80 (32%), Positives = 39/80 (48%)
Query: 1 MWKLKQLVAGXXXXXXXXXXXXXXGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRPI 60
M KLK++++G SLS R+ F AC AG++C L + P
Sbjct: 1 MDKLKKVLSGQDAEDRGGLSEVAEAT-SLSSGTRIKGFIACFAAGILCSLLGTFLLWVPQ 59
Query: 61 K----FAILFTFGNLLAVGS 76
K FA+ +TFGN+ ++GS
Sbjct: 60 KGLYLFAVFYTFGNIASIGS 79
>UNIPROTKB|F6RF48 [details] [associations]
symbol:SFT2D2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016192 "vesicle-mediated transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR007305
InterPro:IPR011691 Pfam:PF04178 GO:GO:0016021 GO:GO:0016192
PANTHER:PTHR23137 GeneTree:ENSGT00390000018525 CTD:375035
OMA:IGSTVFL EMBL:DAAA02006721 EMBL:DAAA02006722 IPI:IPI00867193
RefSeq:NP_001179051.1 UniGene:Bt.8335 Ensembl:ENSBTAT00000057251
GeneID:506944 KEGG:bta:506944 NextBio:20867811 Uniprot:F6RF48
Length = 160
Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 26/80 (32%), Positives = 40/80 (50%)
Query: 1 MWKLKQLVAGXXXXXXXXXXXXXXGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRPI 60
M KLK++++G SLS R+ F AC AG++C L ++ P
Sbjct: 1 MDKLKKVLSGQDSEDRGGLSEVVEAT-SLSSGTRIKGFIACFAAGILCSLLGTLLLWVPR 59
Query: 61 K----FAILFTFGNLLAVGS 76
K FA+ +TFGN+ ++GS
Sbjct: 60 KGLYLFAVFYTFGNIASLGS 79
>MGI|MGI:1917362 [details] [associations]
symbol:Sft2d2 "SFT2 domain containing 2" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0006810 "transport"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] InterPro:IPR007305 InterPro:IPR011691 Pfam:PF04178
MGI:MGI:1917362 GO:GO:0016021 GO:GO:0016192 GO:GO:0015031
eggNOG:NOG263508 HOGENOM:HOG000017959 HOVERGEN:HBG053306
PANTHER:PTHR23137 GeneTree:ENSGT00390000018525 CTD:375035
OMA:IGSTVFL EMBL:AK036578 EMBL:AK156973 EMBL:BC017549
IPI:IPI00875475 RefSeq:NP_663487.1 UniGene:Mm.288369
PhosphoSite:Q8VD57 PaxDb:Q8VD57 PRIDE:Q8VD57
Ensembl:ENSMUST00000043338 GeneID:108735 KEGG:mmu:108735
UCSC:uc007dix.2 NextBio:361271 Bgee:Q8VD57 CleanEx:MM_SFT2D2
Genevestigator:Q8VD57 GermOnline:ENSMUSG00000040848 Uniprot:Q8VD57
Length = 159
Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 24/80 (30%), Positives = 40/80 (50%)
Query: 1 MWKLKQLVAGXXXXXXXXXXXXXXGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRPI 60
M KLK++++G SLS+ R+ F AC G++C L ++ P
Sbjct: 1 MDKLKKVLSGQDTEDRSGLSEVVEA-SSLSWGTRIKGFIACFALGILCSVLGTLLLWVPR 59
Query: 61 K----FAILFTFGNLLAVGS 76
K FA+ +T GN++++GS
Sbjct: 60 KGLGLFAVFYTLGNIMSIGS 79
>RGD|1310623 [details] [associations]
symbol:Sft2d2 "SFT2 domain containing 2" species:10116 "Rattus
norvegicus" [GO:0015031 "protein transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] InterPro:IPR007305
InterPro:IPR011691 Pfam:PF04178 RGD:1310623 GO:GO:0016021
GO:GO:0016192 GO:GO:0015031 eggNOG:NOG263508 HOGENOM:HOG000017959
HOVERGEN:HBG053306 OrthoDB:EOG4WSWBV PANTHER:PTHR23137
GeneTree:ENSGT00390000018525 CTD:375035 OMA:IGSTVFL EMBL:BC099092
IPI:IPI00196919 RefSeq:NP_001029183.1 UniGene:Rn.8424 PRIDE:Q4FZV2
Ensembl:ENSRNOT00000004065 GeneID:360868 KEGG:rno:360868
UCSC:RGD:1310623 InParanoid:Q4FZV2 NextBio:674432
Genevestigator:Q4FZV2 GermOnline:ENSRNOG00000003038 Uniprot:Q4FZV2
Length = 157
Score = 95 (38.5 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 23/81 (28%), Positives = 43/81 (53%)
Query: 1 MWKLKQLVAGXXXXXXXXXXXXXXGICSLSYTQRMYAFAACLLAGLVCMFL-SIIVFV-R 58
M KLK++++G SLS++ R+ F C G++C L +++++V R
Sbjct: 1 MDKLKKVLSGQDTEDRSGLSEVVES-SSLSWSTRIKGFIVCFALGILCSLLGTLLLWVSR 59
Query: 59 PIKFAILFTFGNLLAVGSLRY 79
FA+ +T GN+ ++GS +
Sbjct: 60 KGLFAVFYTLGNITSIGSTMF 80
>POMBASE|SPAC1527.02 [details] [associations]
symbol:sft2 "Golgi transport protein Sft2 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000139 "Golgi
membrane" evidence=ISO] [GO:0000329 "fungal-type vacuole membrane"
evidence=IDA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=ISO] [GO:0006895 "Golgi
to endosome transport" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR007305 InterPro:IPR011691
Pfam:PF04178 PomBase:SPAC1527.02 GO:GO:0016021 GO:GO:0006886
GO:GO:0000139 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0000329
GO:GO:0006895 PANTHER:PTHR23137 HOGENOM:HOG000233384
RefSeq:NP_594553.1 STRING:Q9P6K1 EnsemblFungi:SPAC1527.02.1
GeneID:2541611 KEGG:spo:SPAC1527.02 eggNOG:COG5102 OMA:ESEANSW
OrthoDB:EOG4X9BSQ NextBio:20802705 Uniprot:Q9P6K1
Length = 201
Score = 91 (37.1 bits), Expect = 0.00039, P = 0.00039
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 28 SLSYTQRMYAFAACLLAGLVCMFLSIIVF----VRPIKFAILFTFGNLLAV 74
SLS +R F CLL L C ++ +F ++P KF +L+T G+LLAV
Sbjct: 61 SLSRWERYMLFGICLLGSLACYAIACFMFPVLVLKPRKFVLLWTMGSLLAV 111
>ZFIN|ZDB-GENE-040426-1350 [details] [associations]
symbol:sft2d1 "SFT2 domain containing 1"
species:7955 "Danio rerio" [GO:0006810 "transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] InterPro:IPR007305
InterPro:IPR011691 Pfam:PF04178 ZFIN:ZDB-GENE-040426-1350
GO:GO:0016021 GO:GO:0016192 CTD:113402 HOGENOM:HOG000017959
HOVERGEN:HBG053306 PANTHER:PTHR23137 EMBL:BC053226 IPI:IPI00507373
RefSeq:NP_956666.1 UniGene:Dr.84358 GeneID:393343 KEGG:dre:393343
InParanoid:Q7T375 NextBio:20814393 ArrayExpress:Q7T375
Uniprot:Q7T375
Length = 161
Score = 88 (36.0 bits), Expect = 0.00043, P = 0.00043
Identities = 23/80 (28%), Positives = 39/80 (48%)
Query: 1 MWKLKQLVAGXXXXXXXXXXXXXXGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRP- 59
M KL+++++G +LS++ R+ F C AG++C L + P
Sbjct: 1 MDKLRRVLSGREENEEMGLTAQVLDGSTLSFSTRLKWFIICFAAGILCSILGTALLFLPK 60
Query: 60 --IK-FAILFTFGNLLAVGS 76
IK FA+ +T GN+ A+ S
Sbjct: 61 AGIKLFAVFYTLGNIAALSS 80
>UNIPROTKB|E1C5F8 [details] [associations]
symbol:SFT2D1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA]
InterPro:IPR007305 InterPro:IPR011691 Pfam:PF04178 GO:GO:0016021
GO:GO:0016192 PANTHER:PTHR23137 GeneTree:ENSGT00390000018525
EMBL:AADN02035571 IPI:IPI00812458 Ensembl:ENSGALT00000037667
Uniprot:E1C5F8
Length = 152
Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
Identities = 24/79 (30%), Positives = 39/79 (49%)
Query: 1 MWKLKQLVAGXXXXXXXXXXXXXXGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRP- 59
M KL+++++G +LS+ R+ FA C +AG+ C L + P
Sbjct: 1 MEKLRRVLSGQDDEEQGLTAQVLDA-STLSFGTRVKWFAICFIAGVACSILGTALLWLPK 59
Query: 60 -IK-FAILFTFGNLLAVGS 76
IK FA+ +T GN+ A+ S
Sbjct: 60 GIKLFAVFYTLGNIAALAS 78
>UNIPROTKB|F1NPE6 [details] [associations]
symbol:SFT2D1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA]
InterPro:IPR007305 InterPro:IPR011691 Pfam:PF04178 GO:GO:0016021
GO:GO:0016192 PANTHER:PTHR23137 GeneTree:ENSGT00390000018525
EMBL:AADN02035571 IPI:IPI00597800 Ensembl:ENSGALT00000031824
OMA:ALARTCF Uniprot:F1NPE6
Length = 153
Score = 87 (35.7 bits), Expect = 0.00047, P = 0.00047
Identities = 24/79 (30%), Positives = 39/79 (49%)
Query: 1 MWKLKQLVAGXXXXXXXXXXXXXXGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRP- 59
M KL+++++G +LS+ R+ FA C +AG+ C L + P
Sbjct: 2 MEKLRRVLSGQDDEEQGLTAQVLDA-STLSFGTRVKWFAICFIAGVACSILGTALLWLPK 60
Query: 60 -IK-FAILFTFGNLLAVGS 76
IK FA+ +T GN+ A+ S
Sbjct: 61 GIKLFAVFYTLGNIAALAS 79
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.337 0.144 0.458 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 89 75 0.00091 102 3 11 21 0.35 28
29 0.47 29
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 452 (48 KB)
Total size of DFA: 87 KB (2067 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 7.05u 0.07s 7.12t Elapsed: 00:00:01
Total cpu time: 7.05u 0.07s 7.12t Elapsed: 00:00:01
Start: Thu May 9 21:36:32 2013 End: Thu May 9 21:36:33 2013