Query 034629
Match_columns 89
No_of_seqs 39 out of 41
Neff 2.5
Searched_HMMs 13730
Date Mon Mar 25 07:33:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034629.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/034629hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1c5aa_ a.50.1.1 (A:) C5a anap 33.9 4.8 0.00035 23.7 0.3 22 36-57 8-36 (66)
2 d1kjsa_ a.50.1.1 (A:) C5a anap 19.4 11 0.00083 22.2 0.1 21 37-57 9-36 (74)
3 d1xhoa_ d.79.1.2 (A:) Chorisma 15.7 23 0.0017 22.6 0.9 8 80-87 60-67 (112)
4 d1l2pa_ f.23.21.1 (A:) F1F0 AT 12.9 1.2E+02 0.0085 16.8 4.9 31 31-63 4-34 (61)
5 d1ufya_ d.79.1.2 (A:) Chorisma 12.5 27 0.0019 22.6 0.5 8 80-87 62-69 (121)
6 d2c4ba1 d.1.1.2 (A:3-110) Barn 11.9 30 0.0022 22.0 0.6 11 78-88 26-36 (108)
7 d1aqta1 a.2.10.1 (A:87-136) Ep 10.6 66 0.0048 17.5 1.8 15 54-68 7-21 (50)
8 d1x68a2 g.39.1.3 (A:37-70) Fou 9.9 17 0.0013 19.2 -0.9 9 46-54 24-32 (34)
9 d1w25a3 d.58.29.2 (A:294-455) 8.9 1.3E+02 0.0097 16.9 2.9 18 20-37 134-151 (162)
10 d2qalc1 d.52.3.1 (C:1-105) Rib 8.3 95 0.0069 18.6 2.0 17 3-19 26-42 (105)
No 1
>d1c5aa_ a.50.1.1 (A:) C5a anaphylotoxin {Pig (Sus scrofa domestica) [TaxId: 9823]}
Probab=33.87 E-value=4.8 Score=23.71 Aligned_cols=22 Identities=36% Similarity=0.693 Sum_probs=15.5
Q ss_pred HHHhHHH-HHHHhhh-h-----hHHhHHH
Q 034629 36 KASSHYQ-REAEKCT-A-----GIETCEE 57 (89)
Q Consensus 36 k~aSqYQ-kEAeKCn-~-----gmeTCEe 57 (89)
..+++|+ .+.-||= . .|.|||+
T Consensus 8 ~ka~~Y~~~~lrkCC~dGm~~~p~~tCe~ 36 (66)
T d1c5aa_ 8 EEAAKYKYAMLKKCCYDGAYRNDDETCEE 36 (66)
T ss_dssp HHHHCTTSHHHHHHHHHHHCCCSCSCHHH
T ss_pred HHHHccCChHHHHHHHhcCccCCCCCHHH
Confidence 4578897 7778872 1 2689986
No 2
>d1kjsa_ a.50.1.1 (A:) C5a anaphylotoxin {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.35 E-value=11 Score=22.25 Aligned_cols=21 Identities=38% Similarity=0.820 Sum_probs=14.6
Q ss_pred HHhHHH-HHHHhh-hhhH-----HhHHH
Q 034629 37 ASSHYQ-REAEKC-TAGI-----ETCEE 57 (89)
Q Consensus 37 ~aSqYQ-kEAeKC-n~gm-----eTCEe 57 (89)
.+|||+ .+.-|| -.|| .|||+
T Consensus 9 ka~kY~~~~lrkCC~dG~r~~~~~TCe~ 36 (74)
T d1kjsa_ 9 IAAKYKHSVVKKCCYDGACVNNDETCEQ 36 (74)
T ss_dssp HHHTCSSHHHHHHHHHHHTCSSSSCHHH
T ss_pred HHHccCchHHHHHHHHhCcCCCCCCHHH
Confidence 489997 677776 4444 78875
No 3
>d1xhoa_ d.79.1.2 (A:) Chorismate mutase {Clostridium thermocellum [TaxId: 1515]}
Probab=15.68 E-value=23 Score=22.57 Aligned_cols=8 Identities=50% Similarity=1.169 Sum_probs=5.7
Q ss_pred HHHcCCCc
Q 034629 80 AREHGWKD 87 (89)
Q Consensus 80 ARq~GW~~ 87 (89)
||++||.+
T Consensus 60 aR~lG~~~ 67 (112)
T d1xhoa_ 60 ARNMGWTS 67 (112)
T ss_dssp HHHTTCTT
T ss_pred HhhcCCCc
Confidence 67788864
No 4
>d1l2pa_ f.23.21.1 (A:) F1F0 ATP synthase subunit B, membrane domain {Escherichia coli [TaxId: 562]}
Probab=12.88 E-value=1.2e+02 Score=16.84 Aligned_cols=31 Identities=26% Similarity=0.323 Sum_probs=18.7
Q ss_pred HHHHHHHHhHHHHHHHhhhhhHHhHHHHHHHHH
Q 034629 31 IMDARKASSHYQREAEKCTAGIETCEEARERAE 63 (89)
Q Consensus 31 lleAKk~aSqYQkEAeKCn~gmeTCEeARErAE 63 (89)
|.+||.=++.--..|.|+.+.| -++|+.+|.
T Consensus 4 L~eAK~eAa~Ii~qA~~ra~qI--veeak~~A~ 34 (61)
T d1l2pa_ 4 LKKAKAEAQVIIEQANKRRSQI--LDEAKAEAE 34 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHH
Confidence 4566666666666666664443 566666554
No 5
>d1ufya_ d.79.1.2 (A:) Chorismate mutase {Thermus thermophilus [TaxId: 274]}
Probab=12.45 E-value=27 Score=22.58 Aligned_cols=8 Identities=38% Similarity=0.522 Sum_probs=5.2
Q ss_pred HHHcCCCc
Q 034629 80 AREHGWKD 87 (89)
Q Consensus 80 ARq~GW~~ 87 (89)
||++||.+
T Consensus 62 aR~~G~~~ 69 (121)
T d1ufya_ 62 ARQIGMHR 69 (121)
T ss_dssp HHHTTGGG
T ss_pred HHhcCCCc
Confidence 56777754
No 6
>d2c4ba1 d.1.1.2 (A:3-110) Barnase {Bacillus amyloliquefaciens [TaxId: 1390]}
Probab=11.86 E-value=30 Score=22.04 Aligned_cols=11 Identities=27% Similarity=0.661 Sum_probs=8.5
Q ss_pred HHHHHcCCCcC
Q 034629 78 KRAREHGWKDD 88 (89)
Q Consensus 78 ~RARq~GW~~~ 88 (89)
.-|+.+||+.+
T Consensus 26 ~qA~~~GW~~~ 36 (108)
T d2c4ba1 26 SEAQALGWVAS 36 (108)
T ss_dssp HHHHHTTCCGG
T ss_pred HHHHHcCCCCC
Confidence 45889999864
No 7
>d1aqta1 a.2.10.1 (A:87-136) Epsilon subunit of F1F0-ATP synthase C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=10.58 E-value=66 Score=17.45 Aligned_cols=15 Identities=27% Similarity=0.470 Sum_probs=11.6
Q ss_pred hHHHHHHHHHHHHHH
Q 034629 54 TCEEARERAEKDLGE 68 (89)
Q Consensus 54 TCEeARErAEa~L~~ 68 (89)
.-++|+++||..|..
T Consensus 7 rA~eAk~~AEe~l~~ 21 (50)
T d1aqta1 7 RAMEAKRKAEEHISS 21 (50)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHc
Confidence 357899999988854
No 8
>d1x68a2 g.39.1.3 (A:37-70) Four and a half LIM domains protein 5, FHL-5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.92 E-value=17 Score=19.24 Aligned_cols=9 Identities=44% Similarity=1.136 Sum_probs=6.7
Q ss_pred HhhhhhHHh
Q 034629 46 EKCTAGIET 54 (89)
Q Consensus 46 eKCn~gmeT 54 (89)
.||.+||+|
T Consensus 24 ~~cgsg~dt 32 (34)
T d1x68a2 24 QKCGSGMDT 32 (34)
T ss_dssp TTTTCCCCC
T ss_pred hhcCCCcCC
Confidence 478888876
No 9
>d1w25a3 d.58.29.2 (A:294-455) Response regulator PleD, C-terminal domain {Caulobacter crescentus [TaxId: 155892]}
Probab=8.95 E-value=1.3e+02 Score=16.89 Aligned_cols=18 Identities=22% Similarity=0.381 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 034629 20 ANETLQRSKELIMDARKA 37 (89)
Q Consensus 20 A~e~~~~~~~~lleAKk~ 37 (89)
+++-.++|+++|-.||+.
T Consensus 134 ~~~ll~~A~~AL~~AK~~ 151 (162)
T d1w25a3 134 PEALLKRADEGVYQAKAS 151 (162)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 345677899999999874
No 10
>d2qalc1 d.52.3.1 (C:1-105) Ribosomal protein S3 N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=8.29 E-value=95 Score=18.63 Aligned_cols=17 Identities=12% Similarity=0.280 Sum_probs=14.4
Q ss_pred hhHHHHHHHHHHhhHHH
Q 034629 3 KDTVALLSEELALQKSV 19 (89)
Q Consensus 3 K~f~~LLsEELkLqe~v 19 (89)
|+|.++|-|.+++++-.
T Consensus 26 ~~Y~~~l~eD~~IR~~i 42 (105)
T d2qalc1 26 KEFADNLDSDFKVRQYL 42 (105)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHH
Confidence 68999999999998644
Done!