BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034631
MTLYIGREASKRICAETTTEINLLVDNWKYLLAGLVLSSKDKEARTKEENHKLLNGNSVD
PADWRQRTQVNGKVLEDGNVHADNAMNGA

High Scoring Gene Products

Symbol, full name Information P value
AtIPCS2
Arabidopsis Inositol phosphorylceramide synthase 2
protein from Arabidopsis thaliana 2.1e-26
AtIPCS1
Arabidopsis Inositol phosphorylceramide synthase 1
protein from Arabidopsis thaliana 1.8e-22
AtIPCS3
Arabidopsis Inositol phosphorylceramide synthase 3
protein from Arabidopsis thaliana 3.2e-08

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034631
        (89 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2065629 - symbol:AtIPCS2 "Arabidopsis Inositol...   188  2.1e-26   2
TAIR|locus:2084455 - symbol:AtIPCS1 "Arabidopsis Inositol...   151  1.8e-22   2
TAIR|locus:504956063 - symbol:AtIPCS3 "Arabidopsis Inosit...    89  3.2e-08   2


>TAIR|locus:2065629 [details] [associations]
            symbol:AtIPCS2 "Arabidopsis Inositol phosphorylceramide
            synthase 2" species:3702 "Arabidopsis thaliana" [GO:0005886 "plasma
            membrane" evidence=ISM] [GO:0005802 "trans-Golgi network"
            evidence=IDA] [GO:0030148 "sphingolipid biosynthetic process"
            evidence=IDA] [GO:0045140 "inositol phosphoceramide synthase
            activity" evidence=IMP;IDA] [GO:0006612 "protein targeting to
            membrane" evidence=RCA] [GO:0006944 "cellular membrane fusion"
            evidence=RCA] [GO:0009723 "response to ethylene stimulus"
            evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
            [GO:0010363 "regulation of plant-type hypersensitive response"
            evidence=RCA] [GO:0043069 "negative regulation of programmed cell
            death" evidence=RCA] [GO:0050832 "defense response to fungus"
            evidence=RCA] GO:GO:0016021 GO:GO:0005794 EMBL:CP002685
            GO:GO:0006952 GO:GO:0005802 GO:GO:0030148 GO:GO:0045140
            eggNOG:NOG259509 HOGENOM:HOG000005733 ProtClustDB:CLSN2685069
            InterPro:IPR025749 Pfam:PF14360 EMBL:AF325083 EMBL:AY058059
            EMBL:AY090297 EMBL:AK317636 IPI:IPI00547009 PIR:A84799
            RefSeq:NP_565875.1 UniGene:At.14635 STRING:Q9SH93
            EnsemblPlants:AT2G37940.1 GeneID:818371 KEGG:ath:AT2G37940
            TAIR:At2g37940 InParanoid:Q9SH93 OMA:TKEENHK PhylomeDB:Q9SH93
            BioCyc:ARA:AT2G37940-MONOMER BioCyc:MetaCyc:AT2G37940-MONOMER
            Genevestigator:Q9SH93 Uniprot:Q9SH93
        Length = 305

 Score = 188 (71.2 bits), Expect = 2.1e-26, Sum P(2) = 2.1e-26
 Identities = 39/55 (70%), Positives = 42/55 (76%)

Query:    35 LVLSSKDKEARTKEENHKLLNGNSVDPADWRQRTQVNGKVLEDGNVHADNAMNGA 89
             L + SKD   RTKEENHKLLNGN VDPADWR R QVNGK+  +G VH DN MNGA
Sbjct:   255 LPVISKD---RTKEENHKLLNGNGVDPADWRPRAQVNGKIDSNG-VHTDNTMNGA 305

 Score = 128 (50.1 bits), Expect = 2.1e-26, Sum P(2) = 2.1e-26
 Identities = 26/39 (66%), Positives = 31/39 (79%)

Query:     1 MTLYIGREASK---RICAETTTEINLLVDNWKYLLAGLV 36
             MTLYI RE+SK   R C+E +TEI LL +NWKYLLAGL+
Sbjct:     1 MTLYIRRESSKLWKRFCSEISTEIGLLAENWKYLLAGLI 39


>TAIR|locus:2084455 [details] [associations]
            symbol:AtIPCS1 "Arabidopsis Inositol phosphorylceramide
            synthase 1" species:3702 "Arabidopsis thaliana" [GO:0005886 "plasma
            membrane" evidence=ISM] [GO:0030148 "sphingolipid biosynthetic
            process" evidence=IDA] [GO:0045140 "inositol phosphoceramide
            synthase activity" evidence=IMP;IDA] GO:GO:0016021 EMBL:CP002686
            GenomeReviews:BA000014_GR EMBL:AL132960 GO:GO:0030148 GO:GO:0045140
            EMBL:AY048287 EMBL:AY139802 IPI:IPI00540672 IPI:IPI00543730
            PIR:T45942 RefSeq:NP_190970.1 UniGene:At.1413 IntAct:Q9M325
            EnsemblPlants:AT3G54020.1 GeneID:824569 KEGG:ath:AT3G54020
            TAIR:At3g54020 eggNOG:NOG259509 HOGENOM:HOG000005733
            InParanoid:Q9M325 OMA:CASQFLR PhylomeDB:Q9M325
            ProtClustDB:CLSN2685069 Genevestigator:Q9M325 InterPro:IPR025749
            Pfam:PF14360 Uniprot:Q9M325
        Length = 305

 Score = 151 (58.2 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
 Identities = 35/54 (64%), Positives = 37/54 (68%)

Query:    35 LVLSSKDKEARTKEENHKLLNGNSVDPADWRQRTQVNGKVLEDGNVHADNAMNG 88
             L + SKD   RTKEE+HKLLNGN VDPAD R R QVNGK    G  H DNA NG
Sbjct:   256 LPVISKD---RTKEESHKLLNGNGVDPADRRPRAQVNGKDSNGG--HTDNATNG 304

 Score = 133 (51.9 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
 Identities = 28/39 (71%), Positives = 31/39 (79%)

Query:     1 MTLYIGREASK---RICAETTTEINLLVDNWKYLLAGLV 36
             MTLYI REASK   R C+E TTEI LL +NWKYLLAGL+
Sbjct:     1 MTLYIRREASKLWRRFCSEITTEIGLLAENWKYLLAGLL 39


>TAIR|locus:504956063 [details] [associations]
            symbol:AtIPCS3 "Arabidopsis Inositol phosphorylceramide
            synthase 3" species:3702 "Arabidopsis thaliana" [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0030148 "sphingolipid
            biosynthetic process" evidence=IDA] [GO:0045140 "inositol
            phosphoceramide synthase activity" evidence=IMP;IDA] GO:GO:0016021
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030148 GO:GO:0045140
            EMBL:AC004561 eggNOG:NOG259509 HOGENOM:HOG000005733
            ProtClustDB:CLSN2685069 InterPro:IPR025749 Pfam:PF14360
            EMBL:AY231431 EMBL:BX820662 EMBL:AK221522 IPI:IPI00539390
            IPI:IPI00548168 IPI:IPI00570380 RefSeq:NP_001189633.1
            RefSeq:NP_850134.2 RefSeq:NP_973560.1 UniGene:At.11436
            UniGene:At.66368 EnsemblPlants:AT2G29525.1
            EnsemblPlants:AT2G29525.3 GeneID:817501 KEGG:ath:AT2G29525
            TAIR:At2g29525 InParanoid:Q56Y01 OMA:RHDEDIN PhylomeDB:Q56Y01
            Genevestigator:Q56Y01 Uniprot:Q56Y01
        Length = 289

 Score = 89 (36.4 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
 Identities = 20/39 (51%), Positives = 26/39 (66%)

Query:     1 MTLYIGREASK---RICAETTTEINLLVDNWKYLLAGLV 36
             M +Y+ REA K   RI +E T E +LL + WK +LAGLV
Sbjct:     1 MPVYVDREAPKLWRRIYSEATLEASLLAEKWKLVLAGLV 39

 Score = 62 (26.9 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
 Identities = 12/25 (48%), Positives = 20/25 (80%)

Query:    35 LVLSSKDKEARTKEENHKLLNGNSV 59
             L LS+KD + ++KE++ +LLN N+V
Sbjct:   261 LPLSTKDSKNKSKEDHQRLLNENNV 285


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.311   0.128   0.369    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       89        89   0.00091  102 3  11 23  0.39    30
                                                     29  0.50    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  531 (57 KB)
  Total size of DFA:  111 KB (2075 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.29u 0.21s 10.50t   Elapsed:  00:00:01
  Total cpu time:  10.30u 0.21s 10.51t   Elapsed:  00:00:01
  Start:  Thu May  9 21:41:10 2013   End:  Thu May  9 21:41:11 2013

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