Query 034638
Match_columns 88
No_of_seqs 149 out of 1064
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 07:43:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034638.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034638hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2lkn_A AH receptor-interacting 99.9 6.6E-26 2.2E-30 140.4 5.8 82 1-85 10-94 (165)
2 1yat_A FK506 binding protein; 99.9 7.6E-24 2.6E-28 123.7 9.8 81 1-85 6-87 (113)
3 2ppn_A FK506-binding protein 1 99.9 4.2E-24 1.4E-28 123.6 8.2 80 2-85 1-81 (107)
4 3kz7_A FK506-binding protein 3 99.9 2.6E-23 8.8E-28 122.3 10.2 81 2-85 5-92 (119)
5 2y78_A Peptidyl-prolyl CIS-tra 99.9 3.7E-23 1.3E-27 124.1 9.7 81 1-85 28-108 (133)
6 3o5q_A Peptidyl-prolyl CIS-tra 99.9 3.2E-23 1.1E-27 123.6 8.2 80 2-85 20-100 (128)
7 3o5e_A Peptidyl-prolyl CIS-tra 99.9 4.9E-23 1.7E-27 125.0 9.2 80 2-85 36-116 (144)
8 2lgo_A FKBP; infectious diseas 99.9 4.1E-23 1.4E-27 123.5 8.1 81 1-85 22-105 (130)
9 1r9h_A FKB-6, FK506 binding pr 99.9 6.8E-23 2.3E-27 123.2 8.2 81 1-85 14-95 (135)
10 3b7x_A FK506-binding protein 6 99.9 2.5E-23 8.4E-28 125.0 5.2 82 1-85 26-107 (134)
11 2f4e_A ATFKBP42; FKBP-like, al 99.9 3E-22 1E-26 125.5 10.2 82 1-85 49-131 (180)
12 4dip_A Peptidyl-prolyl CIS-tra 99.9 2.6E-22 8.8E-27 119.0 9.1 81 2-85 13-97 (125)
13 1u79_A FKBP-type peptidyl-prol 99.9 8.7E-23 3E-27 121.8 7.0 81 1-85 12-98 (129)
14 3uf8_A Ubiquitin-like protein 99.9 3.5E-22 1.2E-26 127.6 9.1 81 1-85 104-184 (209)
15 2vn1_A 70 kDa peptidylprolyl i 99.9 1.7E-21 5.8E-26 116.1 9.2 79 3-85 18-100 (129)
16 2awg_A 38 kDa FK-506 binding p 99.9 2.7E-21 9.3E-26 113.7 9.0 75 3-85 15-91 (118)
17 1jvw_A Macrophage infectivity 99.9 4.3E-22 1.5E-26 123.5 5.7 79 1-85 37-116 (167)
18 1fd9_A Protein (macrophage inf 99.9 1.3E-21 4.4E-26 125.3 7.5 79 1-85 106-184 (213)
19 3oe2_A Peptidyl-prolyl CIS-tra 99.9 2.7E-21 9.1E-26 124.3 8.8 75 2-85 118-192 (219)
20 1q6h_A FKBP-type peptidyl-prol 99.8 3.8E-21 1.3E-25 124.0 8.7 78 2-85 122-199 (224)
21 1q1c_A FK506-binding protein 4 99.8 8.8E-21 3E-25 125.6 10.6 81 1-85 51-132 (280)
22 2jwx_A FKBP38NTD, FK506-bindin 99.8 4.6E-21 1.6E-25 117.8 8.5 76 2-85 43-121 (157)
23 2d9f_A FK506-binding protein 8 99.8 6E-21 2.1E-25 114.6 6.2 75 3-85 19-95 (135)
24 1kt0_A FKBP51, 51 kDa FK506-bi 99.8 1.7E-20 5.7E-25 129.9 6.7 81 1-85 31-112 (457)
25 2if4_A ATFKBP42; FKBP-like, al 99.8 1.7E-20 5.8E-25 125.6 6.5 82 1-85 49-131 (338)
26 2pbc_A FK506-binding protein 2 99.8 7E-20 2.4E-24 105.0 7.6 69 13-85 3-71 (102)
27 3jxv_A 70 kDa peptidyl-prolyl 99.8 1.5E-19 5E-24 122.8 10.0 81 2-85 245-326 (356)
28 3jxv_A 70 kDa peptidyl-prolyl 99.8 7.4E-21 2.5E-25 129.2 0.0 81 1-85 11-92 (356)
29 3pr9_A FKBP-type peptidyl-prol 99.8 1.7E-18 5.8E-23 106.4 7.3 66 16-85 2-79 (157)
30 1hxv_A Trigger factor; FKBP fo 99.7 3.9E-18 1.3E-22 99.7 7.3 65 13-84 27-93 (113)
31 4dt4_A FKBP-type 16 kDa peptid 99.7 2E-18 6.7E-23 107.2 6.2 67 15-85 24-90 (169)
32 1ix5_A FKBP; ppiase, isomerase 99.7 1E-18 3.5E-23 106.7 4.7 67 16-85 2-80 (151)
33 2kr7_A FKBP-type peptidyl-prol 99.7 1.2E-17 4.1E-22 102.0 8.6 67 14-85 5-72 (151)
34 2kfw_A FKBP-type peptidyl-prol 99.7 1.8E-17 6.2E-22 105.0 8.6 65 16-85 3-67 (196)
35 2k8i_A SLYD, peptidyl-prolyl C 99.7 2.4E-17 8.1E-22 102.5 8.4 65 16-85 3-67 (171)
36 1q1c_A FK506-binding protein 4 99.7 5.1E-17 1.7E-21 107.6 9.9 75 1-85 168-246 (280)
37 3prb_A FKBP-type peptidyl-prol 99.7 2.4E-17 8.1E-22 106.6 7.9 66 16-85 2-79 (231)
38 3cgm_A SLYD, peptidyl-prolyl C 99.6 7.2E-16 2.5E-20 94.7 6.8 60 16-85 3-62 (158)
39 1p5q_A FKBP52, FK506-binding p 99.6 1.6E-14 5.4E-19 96.5 10.6 74 2-85 26-103 (336)
40 1w26_A Trigger factor, TF; cha 99.4 5.8E-13 2E-17 92.6 7.5 67 12-85 154-220 (432)
41 1t11_A Trigger factor, TF; hel 99.3 1.6E-12 5.4E-17 89.4 4.7 62 13-81 158-219 (392)
42 1kt0_A FKBP51, 51 kDa FK506-bi 99.2 6.7E-11 2.3E-15 81.8 9.6 74 2-85 147-224 (457)
43 3gty_X Trigger factor, TF; cha 98.4 6.6E-07 2.2E-11 62.3 5.7 57 15-81 154-210 (433)
44 3htx_A HEN1; HEN1, small RNA m 83.7 3.4 0.00012 31.7 6.3 65 16-80 561-649 (950)
45 2lj4_A Peptidyl-prolyl CIS-tra 63.1 3.8 0.00013 23.1 1.7 22 56-77 79-100 (115)
46 3bmb_A Regulator of nucleoside 62.0 8.3 0.00028 22.3 3.1 24 60-83 91-114 (136)
47 2f23_A Anti-cleavage anti-GREA 58.9 11 0.00036 22.4 3.2 24 60-83 122-145 (156)
48 2lkt_A Retinoic acid receptor 55.8 25 0.00086 19.7 4.4 24 14-40 6-35 (125)
49 2rqs_A Parvulin-like peptidyl- 55.7 8.2 0.00028 20.7 2.2 23 54-76 59-81 (97)
50 2pn0_A Prokaryotic transcripti 54.6 8.7 0.0003 22.4 2.3 25 59-83 93-117 (141)
51 2p4v_A Transcription elongatio 52.3 12 0.00041 22.3 2.7 25 59-83 120-144 (158)
52 3gpk_A PPIC-type peptidyl-prol 52.0 7.7 0.00026 21.7 1.7 23 55-77 65-87 (112)
53 2pv1_A Chaperone SURA; surviVa 51.2 12 0.00042 20.1 2.5 22 56-77 65-86 (103)
54 1jns_A Peptidyl-prolyl CIS-tra 48.2 8.9 0.0003 20.3 1.5 22 56-77 54-75 (92)
55 1zk6_A Foldase protein PRSA; a 48.1 9 0.00031 20.3 1.5 21 56-76 56-76 (93)
56 4g2p_A Chaperone SURA; structu 45.1 8.2 0.00028 21.4 1.1 22 55-76 69-90 (110)
57 2jzv_A Foldase protein PRSA; p 44.8 11 0.00036 20.7 1.6 21 56-76 75-95 (111)
58 2p5d_A UPF0310 protein mjecl36 44.8 14 0.00049 21.7 2.2 19 61-79 29-47 (147)
59 2hd9_A UPF0310 protein PH1033; 44.4 17 0.00058 21.3 2.5 19 64-82 29-47 (145)
60 3ui4_A Peptidyl-prolyl CIS-tra 43.3 12 0.00039 20.4 1.5 21 56-76 57-77 (101)
61 1yw5_A Peptidyl prolyl CIS/tra 42.5 14 0.00046 22.3 1.9 23 54-76 139-161 (177)
62 3tc5_A Peptidyl-prolyl CIS-tra 42.2 10 0.00035 22.7 1.3 23 54-76 128-150 (166)
63 1grj_A GREA protein; transcrip 40.9 10 0.00034 22.6 1.1 25 59-83 122-146 (158)
64 1j6y_A Peptidyl-prolyl CIS-tra 40.3 12 0.00041 21.7 1.3 23 54-76 101-123 (139)
65 3i6c_A Peptidyl-prolyl CIS-tra 40.3 9.6 0.00033 21.7 0.9 21 56-76 87-107 (123)
66 2vb2_X Copper protein, cation 38.2 21 0.00072 19.1 2.0 15 67-81 59-73 (88)
67 2qcp_X Cation efflux system pr 38.1 22 0.00074 18.7 2.0 15 67-81 51-65 (80)
68 1xd3_A Ubiquitin carboxyl-term 35.0 38 0.0013 21.5 3.1 28 11-40 155-182 (230)
69 3eg3_A Proto-oncogene tyrosine 34.9 21 0.00072 17.0 1.6 21 68-88 22-42 (63)
70 3lvj_C Sulfurtransferase TUSA; 33.6 39 0.0013 17.5 2.7 26 57-82 17-46 (82)
71 1cmx_A Protein (ubiquitin YUH1 33.6 42 0.0014 21.4 3.2 28 11-40 152-179 (235)
72 2v1q_A SLA1, cytoskeleton asse 31.5 32 0.0011 16.1 1.9 21 68-88 19-39 (60)
73 1okg_A Possible 3-mercaptopyru 31.3 42 0.0014 22.5 3.1 23 61-83 336-358 (373)
74 1jdq_A TM006 protein, hypothet 30.4 48 0.0016 18.0 2.7 20 63-82 43-62 (98)
75 1oru_A YUAD protein; structura 30.3 29 0.00098 21.2 2.0 21 2-25 162-182 (195)
76 2a28_A BZZ1 protein; SH3 domai 29.7 37 0.0013 15.6 2.0 21 68-88 17-37 (54)
77 1zce_A Hypothetical protein AT 29.1 31 0.001 20.7 1.9 18 64-81 38-55 (155)
78 1tuc_A Alpha-spectrin; capping 28.9 35 0.0012 16.5 1.8 19 69-88 7-25 (63)
79 1je3_A EC005, hypothetical 8.6 28.6 75 0.0026 17.2 3.5 20 63-82 44-63 (97)
80 3fm3_A Methionine aminopeptida 28.4 1.3E+02 0.0046 20.0 5.1 49 15-74 120-174 (358)
81 2ke9_A Caskin-2; SH3 domain, A 27.9 24 0.00081 18.4 1.1 20 68-88 36-55 (83)
82 1gcq_C VAV proto-oncogene; SH3 27.9 41 0.0014 16.4 2.0 21 68-88 27-47 (70)
83 2akk_A RP4479, PHNA-like prote 27.0 32 0.0011 18.1 1.4 23 8-30 5-27 (74)
84 1x6g_A Megakaryocyte-associate 27.0 41 0.0014 17.1 2.0 21 68-88 34-54 (81)
85 1yfb_A Transition state regula 27.0 64 0.0022 15.8 2.8 22 60-82 27-48 (59)
86 3u7z_A Putative metal binding 26.7 73 0.0025 17.5 3.0 13 16-28 87-99 (101)
87 1o65_A Hypothetical protein YI 26.5 25 0.00086 22.5 1.2 22 2-26 155-176 (246)
88 2lj0_A Sorbin and SH3 domain-c 26.2 34 0.0012 16.9 1.5 15 68-82 23-37 (65)
89 1jo8_A ABP1P, actin binding pr 26.0 43 0.0015 15.6 1.8 14 68-81 17-30 (58)
90 1zuy_A Myosin-5 isoform; SH3 d 25.7 36 0.0012 15.8 1.5 15 68-82 18-32 (58)
91 2dl5_A KIAA0769 protein; SH3 d 25.4 42 0.0014 16.9 1.8 21 68-88 30-50 (78)
92 2jt4_A Cytoskeleton assembly c 25.4 46 0.0016 16.2 1.9 21 68-88 23-43 (71)
93 2gbs_A Hypothetical protein RP 25.3 29 0.00099 20.6 1.3 18 64-81 37-54 (145)
94 2pqh_A Spectrin alpha chain, b 25.3 42 0.0014 17.0 1.8 20 68-88 19-38 (80)
95 3tb5_A Methionine aminopeptida 24.9 1.3E+02 0.0045 18.7 5.9 51 14-75 83-142 (264)
96 2jk8_A BEPA, putative cell fil 24.8 1.5E+02 0.0051 19.3 5.6 17 65-81 285-301 (302)
97 1zuu_A BZZ1 protein; SH3 domai 24.4 36 0.0012 15.9 1.3 14 69-82 19-32 (58)
98 2l55_A SILB,silver efflux prot 24.4 84 0.0029 16.4 2.9 16 14-29 46-61 (82)
99 3r8s_P 50S ribosomal protein L 24.3 90 0.0031 17.7 3.2 16 15-30 18-33 (114)
100 3v10_A Rhusiopathiae surface p 24.3 43 0.0015 21.5 2.1 17 68-84 43-59 (321)
101 1k1z_A VAV; SH3, proto-oncogen 24.2 67 0.0023 16.0 2.5 21 68-88 35-55 (78)
102 1gl5_A Tyrosine-protein kinase 24.0 46 0.0016 16.1 1.8 13 69-81 20-32 (67)
103 3rgc_A Possible periplasmic pr 23.9 26 0.00087 21.9 0.9 22 55-76 168-189 (252)
104 2nwm_A Vinexin; cell adhesion; 23.7 70 0.0024 15.5 2.4 20 68-88 18-37 (65)
105 1xgs_A Methionine aminopeptida 23.6 1.5E+02 0.0052 19.0 6.0 51 14-75 71-127 (295)
106 2j6f_A CD2-associated protein; 23.6 44 0.0015 15.9 1.6 21 68-88 18-38 (62)
107 3thk_A Spectrin alpha chain, b 23.6 48 0.0017 16.2 1.8 20 68-88 22-41 (73)
108 1csk_A C-SRC SH3 domain; phosp 23.0 45 0.0015 16.3 1.6 21 68-88 28-48 (71)
109 2ege_A Uncharacterized protein 23.0 42 0.0014 16.8 1.5 21 68-88 31-51 (75)
110 2kgj_A Peptidyl-prolyl CIS-tra 23.0 50 0.0017 17.8 1.9 21 56-77 57-77 (102)
111 2nw5_A Methionine aminopeptida 22.8 1.8E+02 0.0061 19.5 5.2 51 14-75 121-177 (360)
112 2b3h_A Methionine aminopeptida 22.8 1.7E+02 0.0058 19.3 5.1 51 14-75 154-213 (329)
113 2dl7_A KIAA0769 protein; SH3 d 22.3 76 0.0026 15.6 2.4 21 68-88 25-47 (73)
114 3rfw_A Cell-binding factor 2; 21.9 33 0.0011 21.4 1.1 23 54-76 168-190 (252)
115 2lx7_A GAS-7, growth arrest-sp 21.8 33 0.0011 16.8 0.9 12 68-79 21-32 (60)
116 4fln_A Protease DO-like 2, chl 21.7 2.2E+02 0.0075 20.4 5.4 62 2-80 278-341 (539)
117 2vqe_L 30S ribosomal protein S 21.7 1.3E+02 0.0045 17.6 4.1 24 2-25 63-86 (135)
118 2i0n_A Class VII unconventiona 21.4 44 0.0015 16.9 1.4 21 68-88 27-47 (80)
119 1eh1_A Ribosome recycling fact 21.4 26 0.00089 21.6 0.5 60 16-82 35-105 (185)
120 2l66_A SSO7C4, transcriptional 21.3 78 0.0027 14.8 3.3 23 59-82 16-38 (53)
121 4esr_A Jouberin; AHI-1, AHI1, 21.2 47 0.0016 16.1 1.5 15 68-82 23-37 (69)
122 2eve_A Hypothetical protein ps 21.2 39 0.0013 20.3 1.3 18 64-81 35-52 (157)
123 3h0h_A Proto-oncogene tyrosine 21.0 57 0.0019 15.9 1.8 20 68-88 32-51 (73)
124 3v2d_T 50S ribosomal protein L 20.7 1.1E+02 0.0038 18.1 3.2 15 15-29 21-35 (146)
125 2akl_A PHNA-like protein PA012 20.7 37 0.0013 19.9 1.0 24 7-30 68-91 (138)
126 2ct4_A CDC42-interacting prote 20.5 67 0.0023 15.6 2.0 15 68-82 24-38 (70)
127 2vwf_A Growth factor receptor- 20.5 64 0.0022 14.9 1.8 14 68-81 19-32 (58)
128 1ge9_A Ribosome recycling fact 20.4 18 0.00063 22.2 -0.3 66 13-82 33-106 (184)
129 1oot_A Hypothetical 40.4 kDa p 20.3 70 0.0024 14.9 2.0 21 68-88 20-41 (60)
130 2ydl_A SH3 domain-containing k 20.1 71 0.0024 15.7 2.0 21 68-88 19-40 (69)
No 1
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.92 E-value=6.6e-26 Score=140.36 Aligned_cols=82 Identities=24% Similarity=0.390 Sum_probs=74.7
Q ss_pred CCeEEEEeccCCCCC--CCCCCEEEEEEEEEEeC-CCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEE
Q 034638 1 MGIEKQILTPGNGPK--PVAGQKVTVHCTGYGKN-GDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVAR 77 (88)
Q Consensus 1 ~Gv~~~vl~~G~g~~--~~~gd~V~i~y~~~~~~-gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~ 77 (88)
.||+|+++++|+|.. ++.||.|.+||++++.| +| ++||||+.++ +|+.|.+|.+++|+||+++|.+|++|++++
T Consensus 10 ~Gv~~~vl~~G~G~~p~~~~G~~V~vhY~g~l~d~~G--~~FDsS~~rg-~P~~f~lG~g~vI~Gwd~gl~~M~~Ge~~~ 86 (165)
T 2lkn_A 10 DGIQKRVIQEGRGELPDFQDGTKATFHYRTLHSDDEG--TVLDDSRARG-KPMELIIGKKFKLPVWETIVCTMREGEIAQ 86 (165)
T ss_dssp TSCCCCEEECCSSCCCCCCTTCEEEEECEEECSSSSC--CEEEESTTTT-CCEEEESSSSCSCSHHHHHHTTCCTTCEEE
T ss_pred CCeEEEEEECCcCCCCCCCCCCEEEEEEEEEEeCCCc--cEEEecccCC-CCEEEEecCCCccHHHHHHHhcCccCceEE
Confidence 389999999999976 46899999999999865 33 9999999976 599999999999999999999999999999
Q ss_pred EEECCCCC
Q 034638 78 LRTKPSSS 85 (88)
Q Consensus 78 ~~ip~~~a 85 (88)
|+|||++|
T Consensus 87 ~~ipp~la 94 (165)
T 2lkn_A 87 FLCDIKHV 94 (165)
T ss_dssp EECCHHHH
T ss_pred EEECHHHh
Confidence 99999875
No 2
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.91 E-value=7.6e-24 Score=123.68 Aligned_cols=81 Identities=44% Similarity=0.739 Sum_probs=75.5
Q ss_pred CCeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEE
Q 034638 1 MGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLR 79 (88)
Q Consensus 1 ~Gv~~~vl~~G~g~~-~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ 79 (88)
+|++|+++++|+|.. ++.||.|.+||++++.|| ++|++++.++ +|+.|.+|.+++++||+++|.+|++|+++++.
T Consensus 6 ~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG---~~~d~s~~~~-~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~v~ 81 (113)
T 1yat_A 6 GNVKIDRISPGDGATFPKTGDLVTIHYTGTLENG---QKFDSSVDRG-SPFQCNIGVGQVIKGWDVGIPKLSVGEKARLT 81 (113)
T ss_dssp GGCEEEEEECCCSSCCCCTTCEEEEEEEEEETTS---CEEEESTTTT-CCEEEETTSSSSCHHHHHHGGGCCTTCEEEEE
T ss_pred CCeEEEEEECCCCcccCCCCCEEEEEEEEEECCC---CEEEecCCCC-CcEEEEeCCCCccHHHHHHHhCCCCCCEEEEE
Confidence 589999999999999 999999999999998777 9999998744 59999999999999999999999999999999
Q ss_pred ECCCCC
Q 034638 80 TKPSSS 85 (88)
Q Consensus 80 ip~~~a 85 (88)
|||++|
T Consensus 82 ip~~~a 87 (113)
T 1yat_A 82 IPGPYA 87 (113)
T ss_dssp ECGGGT
T ss_pred ECHHHC
Confidence 999775
No 3
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.91 E-value=4.2e-24 Score=123.60 Aligned_cols=80 Identities=43% Similarity=0.841 Sum_probs=74.5
Q ss_pred CeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 034638 2 GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRT 80 (88)
Q Consensus 2 Gv~~~vl~~G~g~~-~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~i 80 (88)
|++|+++++|+|.. ++.||.|.+||++++.|| ++|++++.++ +|+.|.+|.+++++||+++|.+|++|+++++.|
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG---~~~d~s~~~~-~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~~~i 76 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDG---KKFDSSRDRN-KPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTI 76 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTS---CEEEEHHHHT-SCEEEETTSCCSCHHHHHHHTTCCTTCEEEEEE
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEEEEEECCC---CEEEecCCCC-CCEEEEeCCCChHHHHHHHHhCCCCCCEEEEEE
Confidence 79999999999988 999999999999998777 9999998643 599999999999999999999999999999999
Q ss_pred CCCCC
Q 034638 81 KPSSS 85 (88)
Q Consensus 81 p~~~a 85 (88)
||++|
T Consensus 77 p~~~a 81 (107)
T 2ppn_A 77 SPDYA 81 (107)
T ss_dssp CGGGT
T ss_pred CHHHc
Confidence 99875
No 4
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.90 E-value=2.6e-23 Score=122.33 Aligned_cols=81 Identities=35% Similarity=0.621 Sum_probs=74.2
Q ss_pred CeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEeccCCC------CCccEEEEeCCCCccccHHHHhcCCCCCc
Q 034638 2 GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDP------GQQPFTFQIGKGSVIKGWDEGVMGMQVGE 74 (88)
Q Consensus 2 Gv~~~vl~~G~g~~-~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~------~~~p~~~~lG~~~~~~g~~~al~~m~~G~ 74 (88)
|++|+++++|+|.. |+.||.|.+||++++.|| ++|++|+.. ..+|+.|.+|.+++++||+++|.+|++|+
T Consensus 5 g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~dG---~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge 81 (119)
T 3kz7_A 5 KYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDG---TVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGE 81 (119)
T ss_dssp SEEEEEEECCCSSCCCCTTCEEEEEEEEECTTS---CEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTTCCTTC
T ss_pred ccEEEEEEcCCCCCcCCCCCEEEEEEEEEECCC---CEEEeccccccccccCCCCEEEEECCCChhHHHHHHHhCCCCCC
Confidence 79999999999965 999999999999998777 999999852 12599999999999999999999999999
Q ss_pred EEEEEECCCCC
Q 034638 75 VARLRTKPSSS 85 (88)
Q Consensus 75 ~~~~~ip~~~a 85 (88)
+++|.|||++|
T Consensus 82 ~~~v~ip~~~a 92 (119)
T 3kz7_A 82 KARLEIEPEWA 92 (119)
T ss_dssp EEEEEECGGGT
T ss_pred EEEEEECcHHh
Confidence 99999999876
No 5
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.90 E-value=3.7e-23 Score=124.12 Aligned_cols=81 Identities=52% Similarity=0.858 Sum_probs=75.4
Q ss_pred CCeEEEEeccCCCCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 034638 1 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRT 80 (88)
Q Consensus 1 ~Gv~~~vl~~G~g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~i 80 (88)
.|++|+++++|+|..++.||.|.+||++++.|| ++|+++++++ +|+.|.+|.+++++||+++|.+|++||+++|.|
T Consensus 28 ~gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~dG---~~fdss~~~~-~p~~f~lG~g~vi~G~eeaL~gmk~Ge~~~v~i 103 (133)
T 2y78_A 28 SGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDG---QKFDSSKDRN-DPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTI 103 (133)
T ss_dssp TSCEEEEEECCSSCBCCTTSEEEEEEEEEETTS---CEEEETTTTT-CCEEEETTSSSSCHHHHHHSTTCBTTCEEEEEE
T ss_pred CCEEEEEEEcCCCCCCCCCCEEEEEEEEEECCC---CEEeccCcCC-CCEEEEeCCCChhHHHHHHHcCCCCCCEEEEEE
Confidence 489999999999999999999999999998777 9999998744 599999999999999999999999999999999
Q ss_pred CCCCC
Q 034638 81 KPSSS 85 (88)
Q Consensus 81 p~~~a 85 (88)
||++|
T Consensus 104 p~~~a 108 (133)
T 2y78_A 104 PPQLG 108 (133)
T ss_dssp CGGGT
T ss_pred CcHHh
Confidence 99876
No 6
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.89 E-value=3.2e-23 Score=123.56 Aligned_cols=80 Identities=46% Similarity=0.785 Sum_probs=74.3
Q ss_pred CeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 034638 2 GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRT 80 (88)
Q Consensus 2 Gv~~~vl~~G~g~~-~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~i 80 (88)
|++|+++++|+|.. |+.||.|.+||++++.|| ++|++++.++ +|+.|.+|.+++++||+++|.+|++|++++|.|
T Consensus 20 gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG---~~fdss~~~~-~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~i 95 (128)
T 3o5q_A 20 GVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNG---KKFDSSHDRN-EPFVFSLGKGQVIKAWDIGVATMKKGEICHLLC 95 (128)
T ss_dssp SEEEEEEECCSSSCCCCTTCEEEEEEEEEETTS---CEEEEHHHHT-SCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEE
T ss_pred CEEEEEEECCCCCccCCCCCEEEEEEEEEECCC---CEEEecCCCC-CCEEEEECCCCccHHHHHHHhcCCCCCEEEEEE
Confidence 79999999999974 999999999999999887 9999997644 599999999999999999999999999999999
Q ss_pred CCCCC
Q 034638 81 KPSSS 85 (88)
Q Consensus 81 p~~~a 85 (88)
||++|
T Consensus 96 p~~~a 100 (128)
T 3o5q_A 96 KPEYA 100 (128)
T ss_dssp CGGGT
T ss_pred ChHHc
Confidence 99876
No 7
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.89 E-value=4.9e-23 Score=124.99 Aligned_cols=80 Identities=46% Similarity=0.781 Sum_probs=74.8
Q ss_pred CeEEEEeccCCCC-CCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 034638 2 GIEKQILTPGNGP-KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRT 80 (88)
Q Consensus 2 Gv~~~vl~~G~g~-~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~i 80 (88)
|++|+++++|+|. .|+.||.|.+||++++.|| ++|++++.++ +|+.|.+|.+++++||+++|.+|++|++++|+|
T Consensus 36 gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG---~~fdss~~~~-~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~i 111 (144)
T 3o5e_A 36 GVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNG---KKFDSSHDRN-EPFVFSLGKGQVIKAWDIGVATMKKGEICHLLC 111 (144)
T ss_dssp SEEEEEEECCBSSCCCCTTCEEEEEEEEECTTS---CEEEESGGGT-SCEEEETTSSSSCHHHHHHHTTCCBTCEEEEEE
T ss_pred eEEEEEEECCCCCccCCCCCEEEEEEEEEECCC---CEEEeecccC-CCeEEEeCCCcccHHHHHHHhCCCCCCEEEEEE
Confidence 7999999999998 5999999999999998887 9999998754 599999999999999999999999999999999
Q ss_pred CCCCC
Q 034638 81 KPSSS 85 (88)
Q Consensus 81 p~~~a 85 (88)
||++|
T Consensus 112 pp~~a 116 (144)
T 3o5e_A 112 KPEYA 116 (144)
T ss_dssp CGGGT
T ss_pred ChHHC
Confidence 99876
No 8
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.89 E-value=4.1e-23 Score=123.52 Aligned_cols=81 Identities=44% Similarity=0.791 Sum_probs=74.9
Q ss_pred CCeEEE--EeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEE
Q 034638 1 MGIEKQ--ILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVAR 77 (88)
Q Consensus 1 ~Gv~~~--vl~~G~g~~-~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~ 77 (88)
+|++|+ ++++|+|.. ++.||.|.+||++++.|| ++|++++.++ +|+.|.+|.+++++||+++|.+|++|++++
T Consensus 22 ~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~dG---~~fdss~~~~-~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~ 97 (130)
T 2lgo_A 22 MSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDG---KQFDSSRSRG-KPFQFTLGAGEVIKGWDQGVATMTLGEKAL 97 (130)
T ss_dssp SSCCCCEEEEECCCSSCCCCTTSEEEEEEEEECTTS---CEEECTTTTT-CCEEEETTSTTSCHHHHHHHHHSCTTEEEE
T ss_pred CceEEEEEEEeccCCCccCCCCCEEEEEEEEEECCC---CEEEccCcCC-CCEEEEeCCCCccHHHHHHHhCCCCCCEEE
Confidence 478888 999999999 999999999999998777 9999998754 599999999999999999999999999999
Q ss_pred EEECCCCC
Q 034638 78 LRTKPSSS 85 (88)
Q Consensus 78 ~~ip~~~a 85 (88)
|.|||++|
T Consensus 98 v~ip~~~a 105 (130)
T 2lgo_A 98 FTIPYQLA 105 (130)
T ss_dssp EEECTTTS
T ss_pred EEECcHHH
Confidence 99999876
No 9
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.89 E-value=6.8e-23 Score=123.18 Aligned_cols=81 Identities=44% Similarity=0.754 Sum_probs=74.3
Q ss_pred CCeEEEEeccCCCC-CCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEE
Q 034638 1 MGIEKQILTPGNGP-KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLR 79 (88)
Q Consensus 1 ~Gv~~~vl~~G~g~-~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ 79 (88)
.|++|+++++|+|. .++.||.|.+||++++.|| ++|++++.++ +|+.|.+|.+++++||+++|.+|++|++++|.
T Consensus 14 ~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~dG---~~fdss~~~~-~p~~f~lG~~~vi~G~e~~l~gm~~Ge~~~v~ 89 (135)
T 1r9h_A 14 GGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENG---TKFDSSRDRG-DQFSFNLGRGNVIKGWDLGVATMTKGEVAEFT 89 (135)
T ss_dssp SSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTS---CEEEEHHHHT-SCEEEETTTTSSCHHHHHHHTTCCBTCEEEEE
T ss_pred CcEEEEEEEccCCCcCCCCCCEEEEEEEEEECCC---CEEEecCcCC-CCEEEEeCCCCccHHHHHHHhcCCCCCEEEEE
Confidence 48999999999997 5999999999999998777 9999998533 59999999999999999999999999999999
Q ss_pred ECCCCC
Q 034638 80 TKPSSS 85 (88)
Q Consensus 80 ip~~~a 85 (88)
|||++|
T Consensus 90 ip~~~a 95 (135)
T 1r9h_A 90 IRSDYG 95 (135)
T ss_dssp ECGGGT
T ss_pred EChHHc
Confidence 999875
No 10
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.88 E-value=2.5e-23 Score=124.95 Aligned_cols=82 Identities=27% Similarity=0.422 Sum_probs=69.1
Q ss_pred CCeEEEEeccCCCCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 034638 1 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRT 80 (88)
Q Consensus 1 ~Gv~~~vl~~G~g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~i 80 (88)
.|++|+++++|+|..++.||.|.+||++++.++| ++|++++.++ +|+.|.+|.+++++||+++|.+|++|++++|.|
T Consensus 26 ~gl~~~vl~~G~g~~~~~gd~V~v~Y~g~l~~~G--~~fdss~~~~-~p~~f~lG~g~~i~G~e~aL~gm~~Ge~~~v~i 102 (134)
T 3b7x_A 26 RGVLKDVIREGAGDLVAPDASVLVKYSGYLEHMD--RPFDSNYFRK-TPRLMKLGEDITLWGMELGLLSMRRGELARFLF 102 (134)
T ss_dssp SSEEEEEEECCEEEECCTTCEEEEEEEEECTTCS--SCSEEC--------CEEC-CCCCCHHHHHHHHTCEETCEEEEEE
T ss_pred CCEEEEEEEcCCCCCCCCCCEEEEEEEEEECCCC--eEEEecCCCC-CCEEEEcCCcchhHHHHHHHhCCCCCCEEEEEE
Confidence 4899999999999999999999999999987433 9999998644 599999999999999999999999999999999
Q ss_pred CCCCC
Q 034638 81 KPSSS 85 (88)
Q Consensus 81 p~~~a 85 (88)
||++|
T Consensus 103 p~~~a 107 (134)
T 3b7x_A 103 KPNYA 107 (134)
T ss_dssp CGGGT
T ss_pred CHHHC
Confidence 99875
No 11
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.88 E-value=3e-22 Score=125.47 Aligned_cols=82 Identities=29% Similarity=0.410 Sum_probs=75.4
Q ss_pred CCeEEEEeccCCCCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCC-CccccHHHHhcCCCCCcEEEEE
Q 034638 1 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKG-SVIKGWDEGVMGMQVGEVARLR 79 (88)
Q Consensus 1 ~Gv~~~vl~~G~g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~-~~~~g~~~al~~m~~G~~~~~~ 79 (88)
.|++|+++++|+|..++.||.|.+||++++.++| ++|++++..+ +|+.|.+|.+ ++++||+++|.+|++|++++|.
T Consensus 49 ~gl~~~vl~~G~G~~~~~Gd~V~v~Y~g~l~~dG--~~fdss~~~~-~p~~f~lG~g~~vi~G~eeaL~gMk~Ge~~~v~ 125 (180)
T 2f4e_A 49 EKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNSQ--HKFEDTWHEQ-QPIELVLGKEKKELAGLAIGVASMKSGERALVH 125 (180)
T ss_dssp TTEEEEEEECCBSCCBCTTCEEEEEEEEEETTTC--CEEEETTTTT-CCEEEETTSCCGGGHHHHHHHTTCCBTCEEEEE
T ss_pred CceEEEEEeCCCCCCCCCCCEEEEEEEEEECCCC--cEEeccCccC-CCEEEEeCCCCchhHHHHHHHhCCCCCCEEEEE
Confidence 3899999999999999999999999999997544 9999998754 5999999999 9999999999999999999999
Q ss_pred ECCCCC
Q 034638 80 TKPSSS 85 (88)
Q Consensus 80 ip~~~a 85 (88)
|||++|
T Consensus 126 iPp~~a 131 (180)
T 2f4e_A 126 VGWELA 131 (180)
T ss_dssp ECGGGT
T ss_pred ECchHh
Confidence 999876
No 12
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.88 E-value=2.6e-22 Score=119.03 Aligned_cols=81 Identities=33% Similarity=0.559 Sum_probs=73.7
Q ss_pred CeEEEEeccCC--CCCCCCCCEEEEEEEEEEe-CCCceeeEeccCCC-CCccEEEEeCCCCccccHHHHhcCCCCCcEEE
Q 034638 2 GIEKQILTPGN--GPKPVAGQKVTVHCTGYGK-NGDLSQKFWSTKDP-GQQPFTFQIGKGSVIKGWDEGVMGMQVGEVAR 77 (88)
Q Consensus 2 Gv~~~vl~~G~--g~~~~~gd~V~i~y~~~~~-~gg~~~~~~~t~~~-~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~ 77 (88)
|++|+++++|+ |..++.||.|.+||++++. || ++|++++.. ..+|+.|.+|.+++++||+++|.+|++|++++
T Consensus 13 gl~~~~l~~g~~~g~~~~~gd~V~v~Y~g~~~~dG---~~fdss~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge~~~ 89 (125)
T 4dip_A 13 EVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKDG---SLFHSTHKHNNGQPIWFTLGILEALKGWDQGLKGMCVGEKRK 89 (125)
T ss_dssp CCEEEEEECCSCCSCCCCTTCEEEEEEEEEETTTC---CEEEEHHHHTTTCCEEEETTSCSSCHHHHHHSTTCCTTCEEE
T ss_pred CeEEEEEEcCCCCCCcCCCCCEEEEEEEEEECCCC---cEEEEcccCCCCcCEEEEeCCCChhHHHHHHHhCCCCCCEEE
Confidence 78999999998 7779999999999999998 66 999999731 13599999999999999999999999999999
Q ss_pred EEECCCCC
Q 034638 78 LRTKPSSS 85 (88)
Q Consensus 78 ~~ip~~~a 85 (88)
|.|||++|
T Consensus 90 ~~ip~~~a 97 (125)
T 4dip_A 90 LIIPPALG 97 (125)
T ss_dssp EEECGGGT
T ss_pred EEEChHHh
Confidence 99999876
No 13
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.88 E-value=8.7e-23 Score=121.79 Aligned_cols=81 Identities=41% Similarity=0.709 Sum_probs=74.8
Q ss_pred CCeEEEEeccCCCCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcC------CCCCc
Q 034638 1 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMG------MQVGE 74 (88)
Q Consensus 1 ~Gv~~~vl~~G~g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~------m~~G~ 74 (88)
.|++|+++++|+|..++.||.|.+||++++.|| ++|++++.++ +|+.|.+|.+++++||+++|.+ |++|+
T Consensus 12 ~Gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~dG---~~fdss~~~~-~p~~f~lG~~~~i~G~~~~L~G~~~~~~m~~Ge 87 (129)
T 1u79_A 12 SGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENG---KVFDSSYNRG-KPLTFRIGVGEVIKGWDQGILGSDGIPPMLTGG 87 (129)
T ss_dssp TSCEEEEEECCSSCBCCTTCEEEEEEEEECTTS---CEEEEHHHHT-SCEEEETTSSSSCHHHHHHHHCBTTBCCCBTTC
T ss_pred CCeEEEEEEcCCCCCCCCCCEEEEEEEEEECCC---CEEEecCCCC-CCEEEEeCCCCccHHHHHHhcccccccccCCCC
Confidence 489999999999999999999999999998777 9999998533 5999999999999999999998 99999
Q ss_pred EEEEEECCCCC
Q 034638 75 VARLRTKPSSS 85 (88)
Q Consensus 75 ~~~~~ip~~~a 85 (88)
++++.|||++|
T Consensus 88 ~~~v~ip~~~a 98 (129)
T 1u79_A 88 KRTLRIPPELA 98 (129)
T ss_dssp EEEEEECGGGT
T ss_pred EEEEEEChHHc
Confidence 99999999876
No 14
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.87 E-value=3.5e-22 Score=127.64 Aligned_cols=81 Identities=52% Similarity=0.858 Sum_probs=76.0
Q ss_pred CCeEEEEeccCCCCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 034638 1 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRT 80 (88)
Q Consensus 1 ~Gv~~~vl~~G~g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~i 80 (88)
.|++|+++++|+|..|+.||.|.+||++++.|| ++|++++..+ +|+.|.+|.+++++||+++|.+|++|++++|.|
T Consensus 104 sGl~~~vl~~G~G~~~~~gd~V~v~Y~g~l~dG---~~fdss~~~~-~P~~f~lG~g~vi~G~eeaL~gM~~Ge~~~v~I 179 (209)
T 3uf8_A 104 SGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDG---QKFDSSKDRN-DPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTI 179 (209)
T ss_dssp TSCEEEEEECCCSCBCCTTCEEEEEEEEEETTS---CEEEESGGGT-CCEEEETTSSSSCHHHHHHHTTCBTTCEEEEEE
T ss_pred CceEEEEEEcCCCCcCCCCCEEEEEEEEEECCC---CEEEEccccC-CCEEEEeCCCccchhHHHHHhCCCCCCEEEEEE
Confidence 389999999999999999999999999999877 9999998754 599999999999999999999999999999999
Q ss_pred CCCCC
Q 034638 81 KPSSS 85 (88)
Q Consensus 81 p~~~a 85 (88)
||++|
T Consensus 180 pp~~a 184 (209)
T 3uf8_A 180 PPQLG 184 (209)
T ss_dssp CGGGT
T ss_pred CcHHh
Confidence 99876
No 15
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.86 E-value=1.7e-21 Score=116.10 Aligned_cols=79 Identities=37% Similarity=0.557 Sum_probs=70.0
Q ss_pred eEEEEeccC---CCCCCCCCCEEEEEEEEEE-eCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEE
Q 034638 3 IEKQILTPG---NGPKPVAGQKVTVHCTGYG-KNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARL 78 (88)
Q Consensus 3 v~~~vl~~G---~g~~~~~gd~V~i~y~~~~-~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~ 78 (88)
++++++++| +|..++.||.|.+||++++ .|| ++|++++.++ +|+.|.+|.+++++||+++|.+|++|++++|
T Consensus 18 ~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~dG---~~fd~s~~~~-~p~~f~lG~g~~i~g~e~~l~gm~~Ge~~~v 93 (129)
T 2vn1_A 18 VIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTG---KVFDSSFDRN-VPFKFHLEQGEVIKGWDICVSSMRKNEKCLV 93 (129)
T ss_dssp EEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTTC---CEEEEGGGTT-CCEEEETTSSSSCHHHHHHHTTCCTTCEEEE
T ss_pred EEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCCC---eEEEecCCCC-ccEEEEeCCCCcCHHHHHHHhCCCCCCEEEE
Confidence 455788865 5677999999999999998 577 9999998644 5999999999999999999999999999999
Q ss_pred EECCCCC
Q 034638 79 RTKPSSS 85 (88)
Q Consensus 79 ~ip~~~a 85 (88)
.|||++|
T Consensus 94 ~ip~~~a 100 (129)
T 2vn1_A 94 RIESMYG 100 (129)
T ss_dssp EECGGGT
T ss_pred EEChHHc
Confidence 9999875
No 16
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.86 E-value=2.7e-21 Score=113.66 Aligned_cols=75 Identities=33% Similarity=0.471 Sum_probs=70.0
Q ss_pred eEEEEeccCCCC--CCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 034638 3 IEKQILTPGNGP--KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRT 80 (88)
Q Consensus 3 v~~~vl~~G~g~--~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~i 80 (88)
++|+++++|+|. .++.||.|.+||++++.|| ++|+++ +|+.|.+|.+++++||+++|.+|++|+++++.|
T Consensus 15 ~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~dG---~~~ds~-----~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~~~i 86 (118)
T 2awg_A 15 LRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENG---TRVQEE-----PELVFTLGDCDVIQALDLSVPLMDVGETAMVTA 86 (118)
T ss_dssp EEEEEEECCCTTCCCCCTTSEEEEEEEEECTTS---CEEEEE-----EEEEEETTSSCSCHHHHHHGGGSCTTCEEEEEE
T ss_pred EEEEEEEcCCCCCccCCCCCEEEEEEEEEECCC---CEEECC-----CCEEEEECCCChhHHHHHHHhCCCCCCEEEEEE
Confidence 899999999997 6999999999999998777 999973 599999999999999999999999999999999
Q ss_pred CCCCC
Q 034638 81 KPSSS 85 (88)
Q Consensus 81 p~~~a 85 (88)
||++|
T Consensus 87 p~~~a 91 (118)
T 2awg_A 87 DSKYC 91 (118)
T ss_dssp CGGGT
T ss_pred ChHHc
Confidence 99876
No 17
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.86 E-value=4.3e-22 Score=123.51 Aligned_cols=79 Identities=34% Similarity=0.537 Sum_probs=72.8
Q ss_pred CCeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEE
Q 034638 1 MGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLR 79 (88)
Q Consensus 1 ~Gv~~~vl~~G~g~~-~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ 79 (88)
.|++|+++++|+|.. |+.||.|.+||++++.|| ++|++++.++ .|+.|.+ +++++||+++|.+|++|++++|+
T Consensus 37 sGl~~~vl~~G~G~~~~~~gd~V~v~Y~g~l~dG---~~fdss~~~g-~p~~f~l--g~vI~G~eeaL~gMk~Ge~~~~~ 110 (167)
T 1jvw_A 37 SGLVFQRIARGSGKRAPAIDDKCEVHYTGRLRDG---TVFDSSRERG-KPTTFRP--NEVIKGWTEALQLMREGDRWRLF 110 (167)
T ss_dssp TSCEEEEEECCCCSBCCCTTCCEEEEEEEECTTS---CEEEEHHHHT-SCEEECG--GGSCHHHHHHHTTCCTTCEEEEE
T ss_pred CCEEEEEEEcCCCCcCCCCCCEEEEEEEEEECCC---CEEeeccccC-CCEEEEe--CchhHHHHHHHcCCCCCCEEEEE
Confidence 389999999999999 999999999999998787 9999998644 4999999 58999999999999999999999
Q ss_pred ECCCCC
Q 034638 80 TKPSSS 85 (88)
Q Consensus 80 ip~~~a 85 (88)
|||++|
T Consensus 111 Ip~~la 116 (167)
T 1jvw_A 111 IPYDLA 116 (167)
T ss_dssp ECGGGT
T ss_pred ECchhh
Confidence 999876
No 18
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.85 E-value=1.3e-21 Score=125.34 Aligned_cols=79 Identities=34% Similarity=0.551 Sum_probs=73.1
Q ss_pred CCeEEEEeccCCCCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 034638 1 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRT 80 (88)
Q Consensus 1 ~Gv~~~vl~~G~g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~i 80 (88)
.|++|+++++|+|..|+.||.|.+||++++.|| ++|++++.++ .|+.|.+ +++++||+++|.+|++|++++|+|
T Consensus 106 sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~dG---~vfdss~~~g-~p~~f~l--g~vI~G~eeaL~gMk~Gek~~v~I 179 (213)
T 1fd9_A 106 SGLQYKVINSGNGVKPGKSDTVTVEYTGRLIDG---TVFDSTEKTG-KPATFQV--SQVIPGWTEALQLMPAGSTWEIYV 179 (213)
T ss_dssp TSCEEEEEECCCSCCCCTTCEEEEEEEEEETTS---CEEEEHHHHC-SCEEEEG--GGSCHHHHHHHTTCCTTCEEEEEE
T ss_pred CccEEEEEecCCCccCCCCCEEEEEEEEEECCC---CEEeeccccC-CCEEEEc--CchhhHHHHHHcCCCCCCEEEEEE
Confidence 389999999999999999999999999998887 9999998644 5999999 589999999999999999999999
Q ss_pred CCCCC
Q 034638 81 KPSSS 85 (88)
Q Consensus 81 p~~~a 85 (88)
||++|
T Consensus 180 P~~la 184 (213)
T 1fd9_A 180 PSGLA 184 (213)
T ss_dssp CGGGT
T ss_pred Cchhc
Confidence 99875
No 19
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.85 E-value=2.7e-21 Score=124.27 Aligned_cols=75 Identities=37% Similarity=0.582 Sum_probs=70.9
Q ss_pred CeEEEEeccCCCCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEEC
Q 034638 2 GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTK 81 (88)
Q Consensus 2 Gv~~~vl~~G~g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip 81 (88)
|++|+++++|+|..|..||.|.+||++++.|| ++||+| . +|+.|.+| ++++||+++|.+|++|++++|+||
T Consensus 118 Gl~y~vl~~G~G~~p~~gd~V~V~Y~g~l~dG---~vfDss-~---~P~~f~lG--~vI~G~eeaL~gMk~Gek~~v~IP 188 (219)
T 3oe2_A 118 GILMTELTPGTGPKPDANGRVEVRYVGRLPDG---KIFDQS-T---QPQWFRLD--SVISGWTSALQNMPTGAKWRLVIP 188 (219)
T ss_dssp GCEEEEEECCCSCCCCTTSEEEEEEEEECTTS---CEEEEC-S---SCEEEEGG--GSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred CeEEEEEecCCCccCCCCCEEEEEEEEEECCC---CEeecc-C---CcEEEEec--chhHHHHHHHhCCCCCCEEEEEEC
Confidence 89999999999999999999999999998888 999999 2 59999996 899999999999999999999999
Q ss_pred CCCC
Q 034638 82 PSSS 85 (88)
Q Consensus 82 ~~~a 85 (88)
|++|
T Consensus 189 p~lA 192 (219)
T 3oe2_A 189 SDQA 192 (219)
T ss_dssp GGGT
T ss_pred chhc
Confidence 9876
No 20
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.85 E-value=3.8e-21 Score=123.98 Aligned_cols=78 Identities=28% Similarity=0.588 Sum_probs=72.9
Q ss_pred CeEEEEeccCCCCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEEC
Q 034638 2 GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTK 81 (88)
Q Consensus 2 Gv~~~vl~~G~g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip 81 (88)
|++|+++++|+|..|+.||.|.+||++++.|| ++|++++.++ .|+.|.+ +++++||+++|.+|++|++++|+||
T Consensus 122 Gl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~dG---~vfdss~~~g-~p~~f~l--g~vI~G~eeaL~gMk~Gek~~v~IP 195 (224)
T 1q6h_A 122 GLVYQVVEAGKGEAPKDSDTVVVNYKGTLIDG---KEFDNSYTRG-EPLSFRL--DGVIPGWTEGLKNIKKGGKIKLVIP 195 (224)
T ss_dssp SCEEEEEECCSSCCCCTTCEEEEEEEEEETTS---CEEEEGGGGT-SCEEEEG--GGSCHHHHHHGGGSCTTCEEEEEEC
T ss_pred ceEEEEEecccCccccCCCEEEEEEEEEeCCC---CEEeeccccC-CCEEEEc--CCcchhHHHHHcCCCCCCEEEEEEC
Confidence 89999999999999999999999999998888 9999998755 5999999 5899999999999999999999999
Q ss_pred CCCC
Q 034638 82 PSSS 85 (88)
Q Consensus 82 ~~~a 85 (88)
|++|
T Consensus 196 ~~la 199 (224)
T 1q6h_A 196 PELA 199 (224)
T ss_dssp GGGT
T ss_pred chhh
Confidence 9875
No 21
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.85 E-value=8.8e-21 Score=125.60 Aligned_cols=81 Identities=42% Similarity=0.731 Sum_probs=75.4
Q ss_pred CCeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEE
Q 034638 1 MGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLR 79 (88)
Q Consensus 1 ~Gv~~~vl~~G~g~~-~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ 79 (88)
.|++|+++++|+|.. |+.||.|.+||++++.|| ++|++++.++ +|+.|.+|.+++++||++||.+|++|++++|+
T Consensus 51 ~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~dG---~~fdss~~~~-~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~v~ 126 (280)
T 1q1c_A 51 EGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDG---TKFDSSLDRK-DKFSFDLGKGEVIKAWDIAIATMKVGEVCHIT 126 (280)
T ss_dssp SSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTS---CEEEESTTSS-SCEEEETTTTSSCHHHHHHHTTCCTTCEEEEE
T ss_pred CceEEEEEeCCCCCcCCCCCCEEEEEEEEEECCC---CEEEecccCC-CCEEEEECCcChhHHHHHHHhcCCCCCEEEEE
Confidence 389999999999998 999999999999998777 9999998744 59999999999999999999999999999999
Q ss_pred ECCCCC
Q 034638 80 TKPSSS 85 (88)
Q Consensus 80 ip~~~a 85 (88)
|||++|
T Consensus 127 ipp~~a 132 (280)
T 1q1c_A 127 CKPEYA 132 (280)
T ss_dssp ECGGGT
T ss_pred ECcHHh
Confidence 999875
No 22
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.85 E-value=4.6e-21 Score=117.85 Aligned_cols=76 Identities=34% Similarity=0.493 Sum_probs=70.4
Q ss_pred Ce-EEEEeccCCCC--CCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEE
Q 034638 2 GI-EKQILTPGNGP--KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARL 78 (88)
Q Consensus 2 Gv-~~~vl~~G~g~--~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~ 78 (88)
|+ +|+++++|+|. .|+.||.|.+||++++.|| ++|+++ +|+.|.+|.+++++||+++|.+|++|++++|
T Consensus 43 G~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~dG---~~fds~-----~p~~f~lG~g~vi~G~eeaL~gMk~Ge~~~v 114 (157)
T 2jwx_A 43 GLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENG---TRVQEE-----PELVFTLGDCDVIQALDLSVPLMDVGETAMV 114 (157)
T ss_dssp SSEEEEEEECCSTTSCCCCTTEEEEEEEEEECTTS---CEEEEE-----EEEEEETTTTSSCHHHHHHTTTSCTTCEEEE
T ss_pred CCEEEEEEEccCCCccCCCCCCEEEEEEEEEECCC---CEeecC-----CCEEEEeCCCChhHHHHHHHcCCCCCCEEEE
Confidence 54 79999999997 7999999999999998777 999983 5999999999999999999999999999999
Q ss_pred EECCCCC
Q 034638 79 RTKPSSS 85 (88)
Q Consensus 79 ~ip~~~a 85 (88)
+|||++|
T Consensus 115 ~IP~~~a 121 (157)
T 2jwx_A 115 TADSKYC 121 (157)
T ss_dssp EECGGGT
T ss_pred EECchhc
Confidence 9999876
No 23
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.83 E-value=6e-21 Score=114.63 Aligned_cols=75 Identities=33% Similarity=0.471 Sum_probs=69.5
Q ss_pred eEEEEeccCCCC--CCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 034638 3 IEKQILTPGNGP--KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRT 80 (88)
Q Consensus 3 v~~~vl~~G~g~--~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~i 80 (88)
++|+++++|+|. .++.||.|.+||++++.|| ++|+++ +|+.|.+|.+++++||+++|.+|++|++++|.|
T Consensus 19 l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~dG---~~fds~-----~p~~f~lG~g~~i~G~e~~L~gm~~Ge~~~v~i 90 (135)
T 2d9f_A 19 LRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENG---TRVQEE-----PELVFTLGDCDVIQALDLSVPLMDVGETAMVTA 90 (135)
T ss_dssp SEEEEEECCCSSCCCCCTTSEEEEEEEEEESSS---CEEEEE-----EEEEEETTSCCSCTTTTTTGGGSCTTCEEEEEE
T ss_pred EEEEEEEcCCCCCccCCCCCEEEEEEEEEECCC---CEEecC-----CCEEEEeCCCChhHHHHHHHhCCCCCCEEEEEE
Confidence 899999999997 7999999999999998777 999972 599999999999999999999999999999999
Q ss_pred CCCCC
Q 034638 81 KPSSS 85 (88)
Q Consensus 81 p~~~a 85 (88)
||++|
T Consensus 91 p~~~a 95 (135)
T 2d9f_A 91 DSKYC 95 (135)
T ss_dssp CHHHH
T ss_pred ChhHc
Confidence 98654
No 24
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.82 E-value=1.7e-20 Score=129.90 Aligned_cols=81 Identities=46% Similarity=0.767 Sum_probs=58.3
Q ss_pred CCeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEE
Q 034638 1 MGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLR 79 (88)
Q Consensus 1 ~Gv~~~vl~~G~g~~-~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ 79 (88)
.|++|+++++|+|.. |+.||.|.+||++++.|| ++|++|+.++ +|+.|.+|.+++++||+++|.+|++|++++|+
T Consensus 31 ~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~g---~~~dss~~~~-~p~~~~~g~~~~i~g~~~~l~~m~~Ge~~~~~ 106 (457)
T 1kt0_A 31 RGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNG---KKFDSSHDRN-EPFVFSLGKGQVIKAWDIGVATMKRGEICHLL 106 (457)
T ss_dssp --CEEEC--------CCCBTCEEEEEEEEEC--------CBC-------CEEEETTSTTSCHHHHHHHTTCCTTCEEEEE
T ss_pred CcEEEEEEECCCCCCCCCCCCEEEEEEEEEECCC---CEEeccCCCC-CCeEEEeCCcchhhHHHHHHhhCCCCCEEEEE
Confidence 389999999999998 999999999999998777 9999998754 59999999999999999999999999999999
Q ss_pred ECCCCC
Q 034638 80 TKPSSS 85 (88)
Q Consensus 80 ip~~~a 85 (88)
|||++|
T Consensus 107 i~~~~~ 112 (457)
T 1kt0_A 107 CKPEYA 112 (457)
T ss_dssp ECGGGT
T ss_pred EChHHh
Confidence 999865
No 25
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.82 E-value=1.7e-20 Score=125.61 Aligned_cols=82 Identities=29% Similarity=0.410 Sum_probs=74.7
Q ss_pred CCeEEEEeccCCCCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCC-CccccHHHHhcCCCCCcEEEEE
Q 034638 1 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKG-SVIKGWDEGVMGMQVGEVARLR 79 (88)
Q Consensus 1 ~Gv~~~vl~~G~g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~-~~~~g~~~al~~m~~G~~~~~~ 79 (88)
.|+.++++++|+|..|+.||.|.|||++++.++| ++|++++..+ +|+.|.+|.+ ++++||+++|.+|++||+++|+
T Consensus 49 ~~~~~~~~~~g~g~~~~~gd~v~v~y~g~~~~~g--~~fd~~~~~~-~~~~~~lg~~~~~i~g~e~~l~~m~~Ge~~~~~ 125 (338)
T 2if4_A 49 EKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNSQ--HKFEDTWHEQ-QPIELVLGKEKKELAGLAIGVASMKSGERALVH 125 (338)
T ss_dssp TTEEEEEEECCBSCCCCTTCEEEEEEEEEETTTC--CCCEEHHHHT-CCEEEETTSCCGGGHHHHHHHHHCCBTCEEEEE
T ss_pred CCeEEEEEeCCCCCCCCCCCEEEEEEEEEEcCCC--cEeecccCCC-CCeEEEcCCCCcccHHHHHHHhcCCCCCeEEEE
Confidence 3799999999999999999999999999998644 9999997644 5999999998 8999999999999999999999
Q ss_pred ECCCCC
Q 034638 80 TKPSSS 85 (88)
Q Consensus 80 ip~~~a 85 (88)
|||++|
T Consensus 126 i~~~~~ 131 (338)
T 2if4_A 126 VGWELA 131 (338)
T ss_dssp ECGGGS
T ss_pred ECHHHh
Confidence 998765
No 26
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.81 E-value=7e-20 Score=105.03 Aligned_cols=69 Identities=38% Similarity=0.652 Sum_probs=62.9
Q ss_pred CCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCCCC
Q 034638 13 GPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTKPSSS 85 (88)
Q Consensus 13 g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip~~~a 85 (88)
|..++.||.|.+||++++.|| ++|++++.++ +|+.|.+|.+++++||+++|.+|++|+++++.|||++|
T Consensus 3 g~~~~~gd~V~v~y~~~~~dG---~~~d~s~~~~-~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v~ip~~~a 71 (102)
T 2pbc_A 3 PIKSRKGDVLHMHYTGKLEDG---TEFDSSLPQN-QPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELG 71 (102)
T ss_dssp CCCCCTTCEEEEEEEEECTTS---CEEEESTTTT-CCEEEETTSSSSCHHHHTTSTTCCTTCEEEEEECGGGT
T ss_pred CCcCCCCCEEEEEEEEEECCC---CEEEeCCCCC-CCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECHHHC
Confidence 456999999999999998677 9999998644 59999999999999999999999999999999999875
No 27
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.81 E-value=1.5e-19 Score=122.83 Aligned_cols=81 Identities=35% Similarity=0.557 Sum_probs=73.9
Q ss_pred CeEEEEeccCCC-CCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE
Q 034638 2 GIEKQILTPGNG-PKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRT 80 (88)
Q Consensus 2 Gv~~~vl~~G~g-~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~i 80 (88)
+++++++++|+| ..|+.||.|.+||++++.|| ++|+++.....+|+.|.+|.+++++||+++|.+|++||+++|+|
T Consensus 245 ~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~dG---~~fd~~~~~~~~p~~f~~G~g~~i~G~e~~l~gm~~Ge~~~v~i 321 (356)
T 3jxv_A 245 KILKKVLKEXEGYERPNEGAVVTVKITGKLQDG---TVFLKKGHDEQEPFEFKTDEEAVIEGLDRAVLNMKKGEVALVTI 321 (356)
T ss_dssp CEEEEEEECCBSSCCCCTTCEEEEEEEEEESSS---CEEEEESCTTSCCCEEETTTTSSCHHHHHHHTTCCBTCEEEEEE
T ss_pred ceeEEeeecccccCCCCCCCEEEEEEEEEECCC---CEEeeccccCCcCEEEEECCCccchHHHHHHhCCCCCCEEEEEE
Confidence 689999999999 56999999999999999888 99998853334699999999999999999999999999999999
Q ss_pred CCCCC
Q 034638 81 KPSSS 85 (88)
Q Consensus 81 p~~~a 85 (88)
||++|
T Consensus 322 p~~~a 326 (356)
T 3jxv_A 322 PPEYA 326 (356)
T ss_dssp CGGGT
T ss_pred ChHHc
Confidence 99876
No 28
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.79 E-value=7.4e-21 Score=129.20 Aligned_cols=81 Identities=41% Similarity=0.766 Sum_probs=0.0
Q ss_pred CCeEEEEeccCCC-CCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEE
Q 034638 1 MGIEKQILTPGNG-PKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLR 79 (88)
Q Consensus 1 ~Gv~~~vl~~G~g-~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ 79 (88)
.|++|+++++|+| ..|+.||.|.+||++++.|| ++|++|+.++ +|+.|.+|.+++++||+++|.+|++|++++++
T Consensus 11 ~Gl~~~i~~~G~G~~~~~~gd~V~v~Y~g~~~dG---~~fdss~~~~-~p~~~~lG~g~~i~g~e~~l~gm~~Ge~~~~~ 86 (356)
T 3jxv_A 11 QGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLDG---KKFDSSRDRD-DTFKFKLGQGQVIKGWDQGIKTMKKGENALFT 86 (356)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCeEEEEEEeecCCccCCCCCEEEEEEEEEECCC---CEEEEcccCC-CcEEEEeCCCccchHHHHHHhcCCCCCEEEEE
Confidence 4899999999999 45999999999999999888 9999999754 59999999999999999999999999999999
Q ss_pred ECCCCC
Q 034638 80 TKPSSS 85 (88)
Q Consensus 80 ip~~~a 85 (88)
|||++|
T Consensus 87 ip~~~a 92 (356)
T 3jxv_A 87 IPPELA 92 (356)
T ss_dssp ------
T ss_pred EChHHh
Confidence 999876
No 29
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.76 E-value=1.7e-18 Score=106.41 Aligned_cols=66 Identities=29% Similarity=0.500 Sum_probs=60.1
Q ss_pred CCCCCEEEEEEEEEEeCCCceeeEeccCCC------------CCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCC
Q 034638 16 PVAGQKVTVHCTGYGKNGDLSQKFWSTKDP------------GQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTKPS 83 (88)
Q Consensus 16 ~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~------------~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip~~ 83 (88)
++.||.|.+||++++ || ++||+|+.. ..+|+.|.+|.+++++||++||.+|++|+++++.|||+
T Consensus 2 i~~Gd~V~v~Y~g~l-dG---~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v~Ipp~ 77 (157)
T 3pr9_A 2 VEKGKMVKISYDGYV-DG---KLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPE 77 (157)
T ss_dssp CCTTCEEEEEEEEEE-TT---EEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEEEECGG
T ss_pred CCCCCEEEEEEEEEE-CC---EEEEeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEEEECcH
Confidence 688999999999999 77 999999752 12599999999999999999999999999999999998
Q ss_pred CC
Q 034638 84 SS 85 (88)
Q Consensus 84 ~a 85 (88)
+|
T Consensus 78 ~a 79 (157)
T 3pr9_A 78 KA 79 (157)
T ss_dssp GT
T ss_pred Hh
Confidence 76
No 30
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.75 E-value=3.9e-18 Score=99.74 Aligned_cols=65 Identities=26% Similarity=0.433 Sum_probs=58.0
Q ss_pred CCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEE--CCCC
Q 034638 13 GPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRT--KPSS 84 (88)
Q Consensus 13 g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~i--p~~~ 84 (88)
+.+++.||.|.++|++++ || ++|++++. +|+.|.+|.++++|||+++|.+|++|++++|.| |+++
T Consensus 27 ~~~~~~gD~V~v~Y~g~~-dG---~~fdss~~---~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~Y 93 (113)
T 1hxv_A 27 DKKLANGDIAIIDFTGIV-DN---KKLASASA---QNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSDY 93 (113)
T ss_dssp --CCCSSEEEEEEEEEEE-TT---EECSTTCC---SEEEEEETSSCSCTTHHHHHHTSCSSEEEEECCCCCTTS
T ss_pred CCCCCCCCEEEEEEEEEE-CC---EEcccCCc---cCEEEEECCCChhHHHHHHHCCCCCCCEEEEEEeCchhh
Confidence 557999999999999998 77 99999964 699999999999999999999999999999999 5544
No 31
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.75 E-value=2e-18 Score=107.20 Aligned_cols=67 Identities=25% Similarity=0.469 Sum_probs=61.8
Q ss_pred CCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCCCC
Q 034638 15 KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTKPSSS 85 (88)
Q Consensus 15 ~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip~~~a 85 (88)
.++.||.|.+||++++.|| ++||+|+..+ +|+.|.+|.+++++||+++|.+|++|++++|.|||++|
T Consensus 24 ~i~~gd~V~v~Y~g~l~dG---~vfDss~~~~-~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v~Ipp~~A 90 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKLDDG---TTAESTRNNG-KPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAA 90 (169)
T ss_dssp SCCTTCEEEEEEEEEETTS---CEEEEHHHHT-SCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGT
T ss_pred cCCCCCEEEEEEEEEECCC---CEEEecCCCC-CCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEChHHh
Confidence 5899999999999998777 9999998643 59999999999999999999999999999999999876
No 32
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.75 E-value=1e-18 Score=106.72 Aligned_cols=67 Identities=25% Similarity=0.525 Sum_probs=60.6
Q ss_pred CCCCCEEEEEEEEEEeCCCceeeEeccCC------------CCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCC
Q 034638 16 PVAGQKVTVHCTGYGKNGDLSQKFWSTKD------------PGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTKPS 83 (88)
Q Consensus 16 ~~~gd~V~i~y~~~~~~gg~~~~~~~t~~------------~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip~~ 83 (88)
++.||.|.+||++++.+| ++|++|+. ++.+|+.|.+|.+++++||+++|.+|++|+++++.|||+
T Consensus 2 i~~gd~V~v~Y~g~~~dG---~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v~ipp~ 78 (151)
T 1ix5_A 2 VDKGVKIKVDYIGKLESG---DVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAE 78 (151)
T ss_dssp CCTTCEEEECCEECCTTS---CCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEEEECTT
T ss_pred CCCCCEEEEEEEEEECCC---CEEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEEEECcH
Confidence 678999999999998666 99999963 233599999999999999999999999999999999998
Q ss_pred CC
Q 034638 84 SS 85 (88)
Q Consensus 84 ~a 85 (88)
+|
T Consensus 79 ~a 80 (151)
T 1ix5_A 79 KA 80 (151)
T ss_dssp TS
T ss_pred HH
Confidence 76
No 33
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.74 E-value=1.2e-17 Score=102.01 Aligned_cols=67 Identities=19% Similarity=0.306 Sum_probs=61.4
Q ss_pred CCCCCCCEEEEEEEEEEe-CCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCCCC
Q 034638 14 PKPVAGQKVTVHCTGYGK-NGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTKPSSS 85 (88)
Q Consensus 14 ~~~~~gd~V~i~y~~~~~-~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip~~~a 85 (88)
.+++.||.|++||++++. +| ++|++|+. .+|+.|.+|.+++++||+++|.+|++|+++++.|||++|
T Consensus 5 ~~i~~gd~V~v~Y~g~~~~dG---~~fdss~~--~~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v~ipp~~a 72 (151)
T 2kr7_A 5 DLESIKQAALIEYEVREQGSS---IVLDSNIS--KEPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEA 72 (151)
T ss_dssp CCTTSCCEEEEEEEEEESSCS---CEEEESTT--TCCEEEETTCCCSCHHHHHHHTTCCBTCEEEEEECGGGT
T ss_pred cCCCCCCEEEEEEEEEECCCC---CEEEeCCC--CcCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEecHHH
Confidence 458899999999999986 66 99999986 259999999999999999999999999999999999875
No 34
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.73 E-value=1.8e-17 Score=104.95 Aligned_cols=65 Identities=17% Similarity=0.276 Sum_probs=60.5
Q ss_pred CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCCCC
Q 034638 16 PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTKPSSS 85 (88)
Q Consensus 16 ~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip~~~a 85 (88)
++.+|.|+++|++++.+| ++|++|+.. +|+.|.+|.++++|+|+++|.+|++|++++|.|||++|
T Consensus 3 i~~gd~V~v~Y~g~~~dG---~~fdss~~~--~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v~Ippe~a 67 (196)
T 2kfw_A 3 VAKDLVVSLAYQVRTEDG---VLVDESPVS--APLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDA 67 (196)
T ss_dssp CCSSCEEEEEEEEEETTT---EEEEECCTT--SCCEEESSSSSSCHHHHHHHSSSCTTCEEEEECSTTTT
T ss_pred CCCCCEEEEEEEEEECCC---CEEEecCCC--CCEEEEECCCCcchHHHHHHcCCCCCCEEEEEeCcHHh
Confidence 688999999999997676 999999873 59999999999999999999999999999999999876
No 35
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.72 E-value=2.4e-17 Score=102.51 Aligned_cols=65 Identities=17% Similarity=0.276 Sum_probs=60.3
Q ss_pred CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCCCC
Q 034638 16 PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTKPSSS 85 (88)
Q Consensus 16 ~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip~~~a 85 (88)
++.||.|+++|++++.+| ++|++|+.. +|+.|.+|.++++|||+++|.+|++|++++|.|||++|
T Consensus 3 i~~gd~V~v~Y~g~~~dG---~~fdss~~~--~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v~ippe~a 67 (171)
T 2k8i_A 3 VAKDLVVSLAYQVRTEDG---VLVDESPVS--APLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDA 67 (171)
T ss_dssp CCTTEEEEEEEEEEETTS---CEEEECCSS--SCEEEETTSCSSCSHHHHHHTTCCTTCEEEEEEETTTS
T ss_pred CCCCCEEEEEEEEEECCC---CEEeeccCC--cCEEEEECCCCcchHHHHHHcCCCCCCEEEEEECcHHh
Confidence 678999999999997777 999999862 59999999999999999999999999999999999875
No 36
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.72 E-value=5.1e-17 Score=107.57 Aligned_cols=75 Identities=32% Similarity=0.489 Sum_probs=68.7
Q ss_pred CCeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCC---ccccHHHHhcCCCCCcEE
Q 034638 1 MGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGS---VIKGWDEGVMGMQVGEVA 76 (88)
Q Consensus 1 ~Gv~~~vl~~G~g~~-~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~---~~~g~~~al~~m~~G~~~ 76 (88)
.|++++++++|+|.. ++.||.|.+||++++ +| ++|++ +|+.|.+|.++ +++||+++|.+|++||++
T Consensus 168 ~gl~~~il~~G~G~~~~~~gd~V~i~y~g~~-dG---~~fd~------~~~~f~lG~g~~~~~i~G~e~~l~gmk~Ge~~ 237 (280)
T 1q1c_A 168 GGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KD---KLFDQ------RELRFEIGEGENLDLPYGLERAIQRMEKGEHS 237 (280)
T ss_dssp SSEEEEEEECCSCSCCCCTTCEEEEEEEEEE-TT---EEEEE------EEEEEETTCGGGGTCCHHHHHHHTTCCTTCEE
T ss_pred cceeEEeeecccccccccCCceEEEEEEEEe-CC---EEEec------CCeEEEecCCcccccchhHHHHHhCCCCCcEE
Confidence 378999999999985 999999999999998 77 99997 38999999987 599999999999999999
Q ss_pred EEEECCCCC
Q 034638 77 RLRTKPSSS 85 (88)
Q Consensus 77 ~~~ip~~~a 85 (88)
+|.|||++|
T Consensus 238 ~v~ip~~~~ 246 (280)
T 1q1c_A 238 IVYLKPSYA 246 (280)
T ss_dssp EEEECGGGT
T ss_pred EEEEChhHc
Confidence 999999865
No 37
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.71 E-value=2.4e-17 Score=106.60 Aligned_cols=66 Identities=29% Similarity=0.500 Sum_probs=60.0
Q ss_pred CCCCCEEEEEEEEEEeCCCceeeEeccCCC------------CCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCC
Q 034638 16 PVAGQKVTVHCTGYGKNGDLSQKFWSTKDP------------GQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTKPS 83 (88)
Q Consensus 16 ~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~------------~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip~~ 83 (88)
++.||.|.+||++++ || ++||+|+.. .++|+.|.+|.+++++||++||.+|++|+++++.|||+
T Consensus 2 i~~Gd~V~v~Y~g~l-dG---~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v~Ippe 77 (231)
T 3prb_A 2 VEKGKMVKISYDGYV-DG---KLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPE 77 (231)
T ss_dssp CCTTCEEEEEEEEEE-TT---EEEEESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEEEECGG
T ss_pred CCCCCEEEEEEEEEE-CC---EEEEeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEEEeCcH
Confidence 678999999999999 77 999999852 12599999999999999999999999999999999998
Q ss_pred CC
Q 034638 84 SS 85 (88)
Q Consensus 84 ~a 85 (88)
+|
T Consensus 78 ~A 79 (231)
T 3prb_A 78 KA 79 (231)
T ss_dssp GT
T ss_pred Hh
Confidence 76
No 38
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.63 E-value=7.2e-16 Score=94.74 Aligned_cols=60 Identities=18% Similarity=0.265 Sum_probs=56.1
Q ss_pred CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCCCC
Q 034638 16 PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTKPSSS 85 (88)
Q Consensus 16 ~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip~~~a 85 (88)
++.||.|.+||+++ .|| ++|++|+ +.|.+|.++++|||+++|.+|++|+++++.|||++|
T Consensus 3 i~~gd~V~v~Y~g~-~dG---~~fdss~------~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v~ipp~~a 62 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQ-VEG---EVLDQGE------LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKA 62 (158)
T ss_dssp CCTTEEEEEEEEEE-ETT---EEEEEEE------EEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGT
T ss_pred CCCCCEEEEEEEEE-ECC---EEEEeeE------EEEEECCCCcChHHHHHHcCCCCCCEEEEEECcHHH
Confidence 67899999999999 777 9999876 899999999999999999999999999999999875
No 39
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.59 E-value=1.6e-14 Score=96.45 Aligned_cols=74 Identities=32% Similarity=0.504 Sum_probs=68.2
Q ss_pred CeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCC---ccccHHHHhcCCCCCcEEE
Q 034638 2 GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGS---VIKGWDEGVMGMQVGEVAR 77 (88)
Q Consensus 2 Gv~~~vl~~G~g~~-~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~---~~~g~~~al~~m~~G~~~~ 77 (88)
||.++++++|+|.. |..||.|.+||++++ +| .+||++ |+.|.+|.+. ++++|++||..|++|+++.
T Consensus 26 ~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~-~g---~~fd~~------~~~f~lG~g~~~~~~~~~e~al~~~~~Ge~~~ 95 (336)
T 1p5q_A 26 GIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KD---KLFDQR------ELRFEIGEGENLDLPYGLERAIQRMEKGEHSI 95 (336)
T ss_dssp SEEEEEEECCCCSCCCCTTCEEEEEEEEEE-TT---EEEEEE------EEEEETTCGGGGTCCHHHHHHHTTCCTTCEEE
T ss_pred cEEEEEEeCCCCCCCCCCCCeEEEEEEEEE-CC---EEEecC------CeEEEeCCCCccccchHHHHHHhcCCCCCeEE
Confidence 78999999999984 999999999999998 77 999985 8999999876 5899999999999999999
Q ss_pred EEECCCCC
Q 034638 78 LRTKPSSS 85 (88)
Q Consensus 78 ~~ip~~~a 85 (88)
+.|||++|
T Consensus 96 l~i~p~~a 103 (336)
T 1p5q_A 96 VYLKPSYA 103 (336)
T ss_dssp EEECTTTT
T ss_pred EEECCccc
Confidence 99999874
No 40
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=99.41 E-value=5.8e-13 Score=92.56 Aligned_cols=67 Identities=25% Similarity=0.479 Sum_probs=60.0
Q ss_pred CCCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEECCCCC
Q 034638 12 NGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTKPSSS 85 (88)
Q Consensus 12 ~g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip~~~a 85 (88)
.+.+++.||.|.+||+++. || +.|+++.. .|+.|.+|.++++|||+++|.||++|+++.|.+|+..+
T Consensus 154 ~~~~~~~gD~V~i~y~g~~-dG---~~fd~~~~---~~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v~v~~~~~ 220 (432)
T 1w26_A 154 KDGAVEAEDRVTIDFTGSV-DG---EEFEGGKA---SDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEE 220 (432)
T ss_dssp CSSCCCTTCEEEECEEEES-SS---CBCSSCCC---SSEEEETTSCCSCTTHHHHSSSCCSSCEEEEEEECCTT
T ss_pred cCCCCCCCCEEEEEEEEee-CC---eEccCCCc---cceEEEeCCCCcchHHHHHhCCCCCCCEEEEEECCchh
Confidence 3556999999999999994 66 99999884 59999999999999999999999999999999987643
No 41
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=99.31 E-value=1.6e-12 Score=89.44 Aligned_cols=62 Identities=23% Similarity=0.498 Sum_probs=56.0
Q ss_pred CCCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEEC
Q 034638 13 GPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTK 81 (88)
Q Consensus 13 g~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip 81 (88)
+.+++.||.|.+||+++. || +.|+++.. .|+.|.+|.++++|||+++|.||++|+++.|.+|
T Consensus 158 ~~~~~~gD~V~i~y~g~~-dG---~~fd~~~~---~~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~ 219 (392)
T 1t11_A 158 DEAAENGKRVSIDFVGSI-DG---VEFEGGKA---ENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVT 219 (392)
T ss_dssp SCCCCTTCEEEEEEEEES-SS---SCCTTCEE---EEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEE
T ss_pred CCCCCCCCEEEEEEEEEE-CC---EEccCCCc---cceEEEecCCCcchhHHHHhCCCCCCCEEEEEEe
Confidence 346899999999999994 76 99998854 6999999999999999999999999999999985
No 42
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.23 E-value=6.7e-11 Score=81.78 Aligned_cols=74 Identities=28% Similarity=0.447 Sum_probs=65.3
Q ss_pred CeEEEEeccCCCCC-CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCC---CccccHHHHhcCCCCCcEEE
Q 034638 2 GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKG---SVIKGWDEGVMGMQVGEVAR 77 (88)
Q Consensus 2 Gv~~~vl~~G~g~~-~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~---~~~~g~~~al~~m~~G~~~~ 77 (88)
++.++++++|.|.. |..||.|.+||++++ +| .+|++ +++.|.+|.+ .++++|+.||..|+.|+++.
T Consensus 147 ~~~k~i~~~g~~~~~p~~g~~V~v~y~g~~-~g---~~f~~------~~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~ 216 (457)
T 1kt0_A 147 GIIRRTKRKGEGYSNPNEGATVEIHLEGRC-GG---RMFDC------RDVAFTVGEGEDHDIPIGIDKALEKMQREEQCI 216 (457)
T ss_dssp SEEEEEEECCBCSCCCCTTCEEEEEEEEEE-TT---EEEEE------EEEEEETTCGGGGTCCHHHHHHHTTCCBTCEEE
T ss_pred ceEEEEEecCCCCCCCCCCCEEEEEEEEEe-CC---eEEec------CceEEEeCCCccccCChHHHHHHHhCCCCCEEE
Confidence 56788889998865 999999999999998 77 99996 3789999966 48999999999999999999
Q ss_pred EEECCCCC
Q 034638 78 LRTKPSSS 85 (88)
Q Consensus 78 ~~ip~~~a 85 (88)
|.++|.+|
T Consensus 217 l~i~P~~a 224 (457)
T 1kt0_A 217 LYLGPRYG 224 (457)
T ss_dssp EEECGGGT
T ss_pred EEECcccc
Confidence 99999764
No 43
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=98.36 E-value=6.6e-07 Score=62.25 Aligned_cols=57 Identities=16% Similarity=0.316 Sum_probs=48.6
Q ss_pred CCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEEEC
Q 034638 15 KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRTK 81 (88)
Q Consensus 15 ~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ip 81 (88)
+++.||.|.++|+++. || ..|+++.. .++.+.+|.+. + |+++|.||++|+...|.+.
T Consensus 154 ~a~~gD~V~id~~~~~-dG---~~~~~~~~---~~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~vt 210 (433)
T 3gty_X 154 PAEAGDLVRVNMEVYN-EE---GKKLTSRE---YEYVISEDEDR--P-FVKDLVGKKKGDVVEIERE 210 (433)
T ss_dssp CCCTTSEEEEEEEEEC-TT---SCEEEEEE---EEEECCSSCCC--T-THHHHTTCCTTCEEEEEEE
T ss_pred ccCCCCEEEEEEEEEE-CC---EECcCCCC---CCeEEEecCCc--h-HHHHhCCCCCCceEEEEEe
Confidence 5889999999999984 66 89998654 58888898877 4 9999999999999998763
No 44
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=83.70 E-value=3.4 Score=31.67 Aligned_cols=65 Identities=20% Similarity=0.183 Sum_probs=46.3
Q ss_pred CCCCCEEEEEEEEEEeCCCceeeE--------------eccCC----------CCCccEEEEeCCCCccccHHHHhcCCC
Q 034638 16 PVAGQKVTVHCTGYGKNGDLSQKF--------------WSTKD----------PGQQPFTFQIGKGSVIKGWDEGVMGMQ 71 (88)
Q Consensus 16 ~~~gd~V~i~y~~~~~~gg~~~~~--------------~~t~~----------~~~~p~~~~lG~~~~~~g~~~al~~m~ 71 (88)
+..|+.+.|.|+..+...+.-..- ++.|. ..+..+.|.+|.+.+.+-++..+..|.
T Consensus 561 i~~gs~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ies~~e~~fe~g~g~~~~~le~vV~qms 640 (950)
T 3htx_A 561 ITNGSVVSICYSLSLAVDPEYSSDGESPREDNESNEEMESEYSANCESSVEPIESNEEIEFEVGTGSMNPHIESEVTQMT 640 (950)
T ss_dssp CCTTEEEEEEEEEEEEECC----------------------------CCCEEEEEEEEEEEEETTTCBCHHHHHHHTTCC
T ss_pred cCCCcEEEEEEEEEEEecCcccccccccccccccccccccccccchhhhhhcccccHHHHHHHhcCCccchhhheeeecc
Confidence 689999999999998543210000 00000 012478899999999999999999999
Q ss_pred CCcEEEEEE
Q 034638 72 VGEVARLRT 80 (88)
Q Consensus 72 ~G~~~~~~i 80 (88)
.|+...+..
T Consensus 641 ~gqT~~F~~ 649 (950)
T 3htx_A 641 VGEYASFKM 649 (950)
T ss_dssp TTCEEEEEE
T ss_pred ccceeEEec
Confidence 999988874
No 45
>2lj4_A Peptidyl-prolyl CIS-trans isomerase/rotamase, PUT; tbpin1; NMR {Trypanosoma brucei}
Probab=63.07 E-value=3.8 Score=23.09 Aligned_cols=22 Identities=18% Similarity=0.672 Sum_probs=19.2
Q ss_pred CCCccccHHHHhcCCCCCcEEE
Q 034638 56 KGSVIKGWDEGVMGMQVGEVAR 77 (88)
Q Consensus 56 ~~~~~~g~~~al~~m~~G~~~~ 77 (88)
.+++.+.|++++..|++|+...
T Consensus 79 ~~~~~~~f~~a~~~l~~GeiS~ 100 (115)
T 2lj4_A 79 SGEMMKPFEDAVRALKIGDISP 100 (115)
T ss_dssp TTSSCHHHHHHHTTSCBTCBCC
T ss_pred CCCCCchHHHHHhcCCCCCCCC
Confidence 4789999999999999998653
No 46
>3bmb_A Regulator of nucleoside diphosphate kinase; RNA polymerase, elongation factor, anti-GRE factor, RNA binding protein; 1.91A {Escherichia coli}
Probab=61.97 E-value=8.3 Score=22.31 Aligned_cols=24 Identities=13% Similarity=0.309 Sum_probs=21.0
Q ss_pred cccHHHHhcCCCCCcEEEEEECCC
Q 034638 60 IKGWDEGVMGMQVGEVARLRTKPS 83 (88)
Q Consensus 60 ~~g~~~al~~m~~G~~~~~~ip~~ 83 (88)
..-+-.||.|.++||.+.+..|..
T Consensus 91 ~SPlG~ALlGk~~GD~v~v~~p~G 114 (136)
T 3bmb_A 91 MAPVGAALLGLRVGDSIHWELPGG 114 (136)
T ss_dssp TSHHHHHHTTCBTTCEEEEEETTT
T ss_pred CCHHHHHHcCCCCCCEEEEEcCCC
Confidence 456899999999999999999864
No 47
>2f23_A Anti-cleavage anti-GREA transcription factor GFH1; anti-GREA GFH1 thermus thermophilus; 1.60A {Thermus thermophilus} SCOP: a.2.1.1 d.26.1.2 PDB: 2eul_A 3aoh_X* 3aoi_X* 2etn_A
Probab=58.89 E-value=11 Score=22.39 Aligned_cols=24 Identities=25% Similarity=0.418 Sum_probs=20.8
Q ss_pred cccHHHHhcCCCCCcEEEEEECCC
Q 034638 60 IKGWDEGVMGMQVGEVARLRTKPS 83 (88)
Q Consensus 60 ~~g~~~al~~m~~G~~~~~~ip~~ 83 (88)
..-+-.||.|.++||.+.+..|..
T Consensus 122 ~SPlG~ALlGk~~GD~v~~~~p~G 145 (156)
T 2f23_A 122 ASPMGKALLGHRVGDVLSLDTPKG 145 (156)
T ss_dssp TSHHHHHHTTCCTTCEEEEEETTE
T ss_pred CCHHHHHHcCCCCCCEEEEEcCCC
Confidence 456899999999999999999853
No 48
>2lkt_A Retinoic acid receptor responder protein 3; TIG3, human tumor suppressor II family, NLPC/P60, hydrolase; NMR {Homo sapiens}
Probab=55.82 E-value=25 Score=19.70 Aligned_cols=24 Identities=21% Similarity=0.386 Sum_probs=18.1
Q ss_pred CCCCCCCEEEE------EEEEEEeCCCceeeEe
Q 034638 14 PKPVAGQKVTV------HCTGYGKNGDLSQKFW 40 (88)
Q Consensus 14 ~~~~~gd~V~i------~y~~~~~~gg~~~~~~ 40 (88)
+.|++||.|.+ |+-++..|| .++-
T Consensus 6 ~ep~pGDlI~~~r~~Y~H~gIYvGdg---~ViH 35 (125)
T 2lkt_A 6 QEPKPGDLIEIFRLGYEHWALYIGDG---YVIH 35 (125)
T ss_dssp CCCCTTCEEEEECSSSCEEEEEEETT---EEEE
T ss_pred CCCCCCCEEEEeCCCccEEEEEeCCC---eEEE
Confidence 44999999986 778887777 6554
No 49
>2rqs_A Parvulin-like peptidyl-prolyl isomerase; CIS/trans isomerisation, cenarcheaum symbiosum, low temperat NIMA-kinase, PIN1, cell cycle; NMR {Cenarchaeum symbiosum}
Probab=55.68 E-value=8.2 Score=20.73 Aligned_cols=23 Identities=35% Similarity=0.827 Sum_probs=19.5
Q ss_pred eCCCCccccHHHHhcCCCCCcEE
Q 034638 54 IGKGSVIKGWDEGVMGMQVGEVA 76 (88)
Q Consensus 54 lG~~~~~~g~~~al~~m~~G~~~ 76 (88)
+..+.+.+.|++++..|++|+..
T Consensus 59 ~~~~~l~~~f~~a~~~l~~G~is 81 (97)
T 2rqs_A 59 FGRGKMVKPFEDAAFRLQVGEVS 81 (97)
T ss_dssp ECTTSSCHHHHHHHTTCTTSCBC
T ss_pred EcCCCCCHHHHHHHHcCCCCCcc
Confidence 34578899999999999999864
No 50
>2pn0_A Prokaryotic transcription elongation factor GREA/GREB; structural genomics, APC6349, PSI-2, protein structure initiative; HET: MSE; 1.70A {Nitrosomonas europaea}
Probab=54.56 E-value=8.7 Score=22.41 Aligned_cols=25 Identities=8% Similarity=0.243 Sum_probs=21.1
Q ss_pred ccccHHHHhcCCCCCcEEEEEECCC
Q 034638 59 VIKGWDEGVMGMQVGEVARLRTKPS 83 (88)
Q Consensus 59 ~~~g~~~al~~m~~G~~~~~~ip~~ 83 (88)
+..-+-.||.|.++||.+.+..|..
T Consensus 93 ~~SPlG~ALlGk~vGD~v~v~~P~G 117 (141)
T 2pn0_A 93 ILAPVGSALLGLAQGDEIEWPKPGG 117 (141)
T ss_dssp TTSTTHHHHTTCBTTCEEEEECTTS
T ss_pred CCCHHHHHHcCCCCCCEEEEEcCCC
Confidence 3456889999999999999998864
No 51
>2p4v_A Transcription elongation factor GREB; transcript cleavage, GRE-factors, RNA polymerase; 2.60A {Escherichia coli}
Probab=52.29 E-value=12 Score=22.28 Aligned_cols=25 Identities=16% Similarity=0.279 Sum_probs=21.5
Q ss_pred ccccHHHHhcCCCCCcEEEEEECCC
Q 034638 59 VIKGWDEGVMGMQVGEVARLRTKPS 83 (88)
Q Consensus 59 ~~~g~~~al~~m~~G~~~~~~ip~~ 83 (88)
+..-+-.||.|.++||.+.+..|..
T Consensus 120 ~~SPlg~ALlGk~vGD~v~v~~P~G 144 (158)
T 2p4v_A 120 IDSPMARALLKKEVGDLAVVNTPAG 144 (158)
T ss_dssp TTSHHHHHSTTCCTTCEEEEECSSC
T ss_pred CCCHHHHHhcCCCCCCEEEEEcCCC
Confidence 4456999999999999999998864
No 52
>3gpk_A PPIC-type peptidyl-prolyl CIS-trans isomerase; rotamase,ppiase domain, 11189O3,PSI2., structural genomics; 1.55A {Novosphingobium aromaticivorans}
Probab=51.99 E-value=7.7 Score=21.72 Aligned_cols=23 Identities=13% Similarity=0.099 Sum_probs=19.7
Q ss_pred CCCCccccHHHHhcCCCCCcEEE
Q 034638 55 GKGSVIKGWDEGVMGMQVGEVAR 77 (88)
Q Consensus 55 G~~~~~~g~~~al~~m~~G~~~~ 77 (88)
..+.+.+.|++++..|++|+...
T Consensus 65 ~~~~l~~~f~~a~~~l~~GeiS~ 87 (112)
T 3gpk_A 65 RLAQLPTELATTAASMGPGQLAG 87 (112)
T ss_dssp CGGGSCHHHHHHHHHCCTTCEEE
T ss_pred cccccCHHHHHHHHhCCCCCccc
Confidence 34678999999999999999764
No 53
>2pv1_A Chaperone SURA; surviVal protein A, peptidyl-prolyl CIS-trans isomerase domain, peptide, complex; 1.30A {Escherichia coli} SCOP: d.26.1.1 PDB: 2pv2_A
Probab=51.25 E-value=12 Score=20.15 Aligned_cols=22 Identities=5% Similarity=0.095 Sum_probs=19.2
Q ss_pred CCCccccHHHHhcCCCCCcEEE
Q 034638 56 KGSVIKGWDEGVMGMQVGEVAR 77 (88)
Q Consensus 56 ~~~~~~g~~~al~~m~~G~~~~ 77 (88)
.+.+.+.|++++..|++|+...
T Consensus 65 ~~~l~~~f~~a~~~l~~G~is~ 86 (103)
T 2pv1_A 65 IQELPGIFAQALSTAKKGDIVG 86 (103)
T ss_dssp GGGSCHHHHHHTTTCCTTCEEE
T ss_pred hhhcCHHHHHHHHcCCCCCeec
Confidence 4678899999999999999764
No 54
>1jns_A Peptidyl-prolyl CIS-trans isomerase C; alpha-beta sandwich, CIS peptide bond; NMR {Escherichia coli} SCOP: d.26.1.1 PDB: 1jnt_A
Probab=48.25 E-value=8.9 Score=20.33 Aligned_cols=22 Identities=23% Similarity=0.362 Sum_probs=18.9
Q ss_pred CCCccccHHHHhcCCCCCcEEE
Q 034638 56 KGSVIKGWDEGVMGMQVGEVAR 77 (88)
Q Consensus 56 ~~~~~~g~~~al~~m~~G~~~~ 77 (88)
.+++.+.|++++..|++|+...
T Consensus 54 ~~~l~~~f~~a~~~l~~G~is~ 75 (92)
T 1jns_A 54 QGQMVPAFDKVVFSCPVLEPTG 75 (92)
T ss_dssp TTSSCHHHHHHHHHSCTTCCEE
T ss_pred CcccCHHHHHHHHhCCCCCcCC
Confidence 3678999999999999998754
No 55
>1zk6_A Foldase protein PRSA; alpha/beta structure, isomerase; NMR {Bacillus subtilis}
Probab=48.06 E-value=9 Score=20.29 Aligned_cols=21 Identities=19% Similarity=0.498 Sum_probs=18.6
Q ss_pred CCCccccHHHHhcCCCCCcEE
Q 034638 56 KGSVIKGWDEGVMGMQVGEVA 76 (88)
Q Consensus 56 ~~~~~~g~~~al~~m~~G~~~ 76 (88)
.+.+.+.|++++..|++|+..
T Consensus 56 ~~~l~~~f~~a~~~l~~G~is 76 (93)
T 1zk6_A 56 EGQMDETFSKAAFKLKTGEVS 76 (93)
T ss_dssp TTSSCTTHHHHHHHSCTTCBC
T ss_pred cccCCHHHHHHHHcCCCCCcc
Confidence 578899999999999999864
No 56
>4g2p_A Chaperone SURA; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, pcsep; 1.82A {Salmonella enterica subsp}
Probab=45.05 E-value=8.2 Score=21.36 Aligned_cols=22 Identities=5% Similarity=0.217 Sum_probs=18.8
Q ss_pred CCCCccccHHHHhcCCCCCcEE
Q 034638 55 GKGSVIKGWDEGVMGMQVGEVA 76 (88)
Q Consensus 55 G~~~~~~g~~~al~~m~~G~~~ 76 (88)
..+.+.+.|++++..|++|+..
T Consensus 69 ~~~~l~~~f~~a~~~l~~Geis 90 (110)
T 4g2p_A 69 TPDIFDPAFRDALTKLHKGQIS 90 (110)
T ss_dssp CGGGSCHHHHHHHHTCCTTCBC
T ss_pred cccccCHHHHHHHHcCCCCCcC
Confidence 3467899999999999999865
No 57
>2jzv_A Foldase protein PRSA; ppiase, parvulin, proline isomerase, lipoprotein, membrane, palmitate, rotamase; NMR {Staphylococcus aureus}
Probab=44.82 E-value=11 Score=20.74 Aligned_cols=21 Identities=29% Similarity=0.571 Sum_probs=18.4
Q ss_pred CCCccccHHHHhcCCCCCcEE
Q 034638 56 KGSVIKGWDEGVMGMQVGEVA 76 (88)
Q Consensus 56 ~~~~~~g~~~al~~m~~G~~~ 76 (88)
.+.+.+.|++++..|++|+..
T Consensus 75 ~~~l~~~f~~a~~~l~~G~is 95 (111)
T 2jzv_A 75 KGQTDKDFEKALFKLKDGEVS 95 (111)
T ss_dssp TTSSCHHHHHHHHTCCTTCBC
T ss_pred CCcccHHHHHHHHhCCCCCcC
Confidence 467899999999999999864
No 58
>2p5d_A UPF0310 protein mjecl36; NPPSFA, national project on protein structural and functional analyses; 1.70A {Methanocaldococcus jannaschii}
Probab=44.78 E-value=14 Score=21.68 Aligned_cols=19 Identities=11% Similarity=0.281 Sum_probs=15.8
Q ss_pred ccHHHHhcCCCCCcEEEEE
Q 034638 61 KGWDEGVMGMQVGEVARLR 79 (88)
Q Consensus 61 ~g~~~al~~m~~G~~~~~~ 79 (88)
.+=..-|+.|++||.+.|+
T Consensus 29 ~~arn~lr~Mk~GD~~~fY 47 (147)
T 2p5d_A 29 ERYKNTINKVKVGDKLIIY 47 (147)
T ss_dssp GGGHHHHTTCCTTCEEEEE
T ss_pred HHHHHHHHhCCCCCEEEEE
Confidence 3446678899999999999
No 59
>2hd9_A UPF0310 protein PH1033; pyrococcus horikoshii OT3, structural genomics, NPPSFA, NATI project on protein structural and functional analyses; HET: CIT; 1.35A {Pyrococcus horikoshii} SCOP: b.122.1.8 PDB: 1wmm_A* 2zbn_A
Probab=44.42 E-value=17 Score=21.28 Aligned_cols=19 Identities=5% Similarity=0.158 Sum_probs=16.3
Q ss_pred HHHhcCCCCCcEEEEEECC
Q 034638 64 DEGVMGMQVGEVARLRTKP 82 (88)
Q Consensus 64 ~~al~~m~~G~~~~~~ip~ 82 (88)
...|..|++||.+.|+.+.
T Consensus 29 rn~lr~mk~GD~~~fYhs~ 47 (145)
T 2hd9_A 29 KNTLSRVKPGDKLVIYVRQ 47 (145)
T ss_dssp HHHHTTCCTTCEEEEEECC
T ss_pred HHHHHhCCCCCEEEEEEcc
Confidence 4578899999999999874
No 60
>3ui4_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; peptidyl-prolyl-isomerase; 0.80A {Homo sapiens} SCOP: d.26.1.1 PDB: 3ui5_A 3ui6_A 1fjd_A 1eq3_A
Probab=43.26 E-value=12 Score=20.43 Aligned_cols=21 Identities=19% Similarity=0.496 Sum_probs=18.1
Q ss_pred CCCccccHHHHhcCCCCCcEE
Q 034638 56 KGSVIKGWDEGVMGMQVGEVA 76 (88)
Q Consensus 56 ~~~~~~g~~~al~~m~~G~~~ 76 (88)
.+++.+.|++++..|++|+..
T Consensus 57 ~~~l~~~f~~a~~~l~~G~vs 77 (101)
T 3ui4_A 57 RGSMVGPFQEAAFALPVSGMD 77 (101)
T ss_dssp TTSSCHHHHHHHHTSCCCBTT
T ss_pred CCCCCHHHHHHHHhCCCCCCc
Confidence 467899999999999999754
No 61
>1yw5_A Peptidyl prolyl CIS/trans isomerase; WW-domain, ppiase domain, ordered linker; 1.60A {Candida albicans}
Probab=42.50 E-value=14 Score=22.25 Aligned_cols=23 Identities=30% Similarity=0.631 Sum_probs=19.4
Q ss_pred eCCCCccccHHHHhcCCCCCcEE
Q 034638 54 IGKGSVIKGWDEGVMGMQVGEVA 76 (88)
Q Consensus 54 lG~~~~~~g~~~al~~m~~G~~~ 76 (88)
+..+++.+.|++++..|++|+..
T Consensus 139 ~~~~~l~~~f~~a~f~L~~GeiS 161 (177)
T 1yw5_A 139 FSKGQMQPPFEEAAFNLHVGEVS 161 (177)
T ss_dssp ECTTSSCHHHHHHHHTSCTTCBC
T ss_pred ecccccCHHHHHHHHcCCCCCcC
Confidence 34578899999999999999854
No 62
>3tc5_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; PIN1 mutant (R14A), oncogenic transformation, small molecule cycle, rotamase, phosphoprotein; HET: 3T5 P6G; 1.40A {Homo sapiens} PDB: 2itk_A* 2q5a_A* 2xp3_A* 2xp4_A* 2xp5_A* 2xp7_A* 2xp8_A* 2xp9_A* 2xpa_A* 2xpb_A* 3kab_A* 3kag_A* 3kah_A* 3kai_A* 3kce_A* 3ntp_A* 3odk_A* 3oob_A* 2zr6_A* 1f8a_B* ...
Probab=42.20 E-value=10 Score=22.72 Aligned_cols=23 Identities=17% Similarity=0.580 Sum_probs=19.6
Q ss_pred eCCCCccccHHHHhcCCCCCcEE
Q 034638 54 IGKGSVIKGWDEGVMGMQVGEVA 76 (88)
Q Consensus 54 lG~~~~~~g~~~al~~m~~G~~~ 76 (88)
+..+++.+.|++++..|++|+..
T Consensus 128 ~~~~~l~~~f~~a~f~l~~GeiS 150 (166)
T 3tc5_A 128 FSRGQMQKPFEDASFALRTGEMS 150 (166)
T ss_dssp ECTTSSCHHHHHHHHHSCTTCBC
T ss_pred ecccccCHHHHHHHHhCCCCCCc
Confidence 44578999999999999999864
No 63
>1grj_A GREA protein; transcript elongation factor, transcript cleavage factor, transcription regulation; 2.20A {Escherichia coli} SCOP: a.2.1.1 d.26.1.2
Probab=40.86 E-value=10 Score=22.58 Aligned_cols=25 Identities=20% Similarity=0.319 Sum_probs=17.5
Q ss_pred ccccHHHHhcCCCCCcEEEEEECCC
Q 034638 59 VIKGWDEGVMGMQVGEVARLRTKPS 83 (88)
Q Consensus 59 ~~~g~~~al~~m~~G~~~~~~ip~~ 83 (88)
+..-+-.||.|.++||.+.+..|..
T Consensus 122 ~~SPlG~ALlGk~~GD~v~v~~p~G 146 (158)
T 1grj_A 122 VNSPIARGLIGKEEDDVVVIKTPGG 146 (158)
T ss_dssp SSSHHHHHHTTCBTTCEECC-----
T ss_pred CCCHHHHHHcCCCCCCEEEEEcCCC
Confidence 3456899999999999999998864
No 64
>1j6y_A Peptidyl-prolyl CIS-trans isomerase; parvulin, PIN1, phosphorylation; NMR {Arabidopsis thaliana} SCOP: d.26.1.1
Probab=40.32 E-value=12 Score=21.67 Aligned_cols=23 Identities=26% Similarity=0.729 Sum_probs=19.3
Q ss_pred eCCCCccccHHHHhcCCCCCcEE
Q 034638 54 IGKGSVIKGWDEGVMGMQVGEVA 76 (88)
Q Consensus 54 lG~~~~~~g~~~al~~m~~G~~~ 76 (88)
+..+++.+.|++++..|++|+..
T Consensus 101 ~~~~~l~~~f~~a~~~l~~GeiS 123 (139)
T 1j6y_A 101 FGRGQMQKPFEEATYALKVGDIS 123 (139)
T ss_dssp CSSSSSCTHHHHHHHHCCSSSCC
T ss_pred ecccccCHHHHHHHHcCCCCCcc
Confidence 34578899999999999999864
No 65
>3i6c_A Peptidyl-prolyl CIS-trans isomerase NIMA- interacting 1; SBDD, small molecule, ppiase, cell cycle, nucleus, phosphoprotein, rotamase; HET: GIA; 1.30A {Homo sapiens} PDB: 3ik8_A 3ikd_A* 3ikg_A* 3jyj_A* 3kac_A* 1nmw_A
Probab=40.32 E-value=9.6 Score=21.71 Aligned_cols=21 Identities=19% Similarity=0.613 Sum_probs=18.4
Q ss_pred CCCccccHHHHhcCCCCCcEE
Q 034638 56 KGSVIKGWDEGVMGMQVGEVA 76 (88)
Q Consensus 56 ~~~~~~g~~~al~~m~~G~~~ 76 (88)
.+++.+.|++++..|++|+..
T Consensus 87 ~~~l~~~f~~a~f~l~~GeiS 107 (123)
T 3i6c_A 87 RGQMQKPFEDASFALRTGEMS 107 (123)
T ss_dssp TTTSCHHHHHHHHHSCTTCBC
T ss_pred CCCCCHHHHHHHHhCCCCCcc
Confidence 468999999999999999854
No 66
>2vb2_X Copper protein, cation efflux system protein CUSF; cation PI, metal-binding, metal transport, copper tolerance, transport; 1.70A {Escherichia coli} PDB: 2vb3_X
Probab=38.18 E-value=21 Score=19.10 Aligned_cols=15 Identities=7% Similarity=0.200 Sum_probs=13.0
Q ss_pred hcCCCCCcEEEEEEC
Q 034638 67 VMGMQVGEVARLRTK 81 (88)
Q Consensus 67 l~~m~~G~~~~~~ip 81 (88)
|.++++|++++|.+-
T Consensus 59 l~~lk~Gd~V~F~~~ 73 (88)
T 2vb2_X 59 MSEIKTGDKVAFNFV 73 (88)
T ss_dssp ECCCCTTCEEEEEEE
T ss_pred hhcCCCCCEEEEEEE
Confidence 688999999998874
No 67
>2qcp_X Cation efflux system protein CUSF; silver-binding, copper-binding, beta barrel, OB-fold, metall metal resistance, metal-binding; 1.00A {Escherichia coli str} PDB: 1zeq_X 3e6z_X
Probab=38.06 E-value=22 Score=18.67 Aligned_cols=15 Identities=7% Similarity=0.200 Sum_probs=13.0
Q ss_pred hcCCCCCcEEEEEEC
Q 034638 67 VMGMQVGEVARLRTK 81 (88)
Q Consensus 67 l~~m~~G~~~~~~ip 81 (88)
|.++++|++++|.+-
T Consensus 51 l~~lk~Gd~V~F~~~ 65 (80)
T 2qcp_X 51 MSEIKTGDKVAFNFV 65 (80)
T ss_dssp ECCCCTTCEEEEEEE
T ss_pred hhcCCCCCEEEEEEE
Confidence 788999999998874
No 68
>1xd3_A Ubiquitin carboxyl-terminal esterase L3; enzyme-ligand complex, active site crossover loop, hydrolase; HET: GVE; 1.45A {Homo sapiens} SCOP: d.3.1.6 PDB: 1uch_A*
Probab=34.97 E-value=38 Score=21.49 Aligned_cols=28 Identities=18% Similarity=0.259 Sum_probs=19.6
Q ss_pred CCCCCCCCCCEEEEEEEEEEeCCCceeeEe
Q 034638 11 GNGPKPVAGQKVTVHCTGYGKNGDLSQKFW 40 (88)
Q Consensus 11 G~g~~~~~gd~V~i~y~~~~~~gg~~~~~~ 40 (88)
|.-.++...|.+.+||.++...+| ++++
T Consensus 155 g~t~~p~~~~~~~~HFI~fV~~~G--~LyE 182 (230)
T 1xd3_A 155 GQTEAPSIDEKVDLHFIALVHVDG--HLYE 182 (230)
T ss_dssp SSSCCCCTTSCCCEEEEEEEEETT--EEEE
T ss_pred CCCCCCCCCCCcCeEEEEEEeeCC--EEEE
Confidence 333345567889999999986444 7666
No 69
>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A
Probab=34.90 E-value=21 Score=17.00 Aligned_cols=21 Identities=19% Similarity=0.403 Sum_probs=12.6
Q ss_pred cCCCCCcEEEEEECCCCCCCC
Q 034638 68 MGMQVGEVARLRTKPSSSPWW 88 (88)
Q Consensus 68 ~~m~~G~~~~~~ip~~~a~~~ 88 (88)
..+++|+...+.-.....-||
T Consensus 22 Ls~~~Gd~i~v~~~~~~~~W~ 42 (63)
T 3eg3_A 22 LSITKGEKLRVLGYNHNGEWC 42 (63)
T ss_dssp CCBCTTCEEEEEEECTTSSEE
T ss_pred cCCCCCCEEEEEEeCCCCCeE
Confidence 466778877776643334454
No 70
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=33.63 E-value=39 Score=17.47 Aligned_cols=26 Identities=23% Similarity=0.157 Sum_probs=20.9
Q ss_pred CCcccc----HHHHhcCCCCCcEEEEEECC
Q 034638 57 GSVIKG----WDEGVMGMQVGEVARLRTKP 82 (88)
Q Consensus 57 ~~~~~g----~~~al~~m~~G~~~~~~ip~ 82 (88)
|..+|. ..++|..|++|+...|.+.-
T Consensus 17 Gl~CP~Pvl~~kkal~~l~~G~~l~V~~dd 46 (82)
T 3lvj_C 17 GLRCPEPVMMVRKTVRNMQPGETLLIIADD 46 (82)
T ss_dssp TCCTTHHHHHHHHHHHTSCTTCEEEEEECC
T ss_pred CCCCCHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 455665 78999999999999988753
No 71
>1cmx_A Protein (ubiquitin YUH1-UBAL); ubiquitin hydrolase, deubiquitinating enzyme, cysteine protease, enzyme specificity; 2.25A {Synthetic} SCOP: d.3.1.6
Probab=33.58 E-value=42 Score=21.43 Aligned_cols=28 Identities=21% Similarity=0.322 Sum_probs=20.0
Q ss_pred CCCCCCCCCCEEEEEEEEEEeCCCceeeEe
Q 034638 11 GNGPKPVAGQKVTVHCTGYGKNGDLSQKFW 40 (88)
Q Consensus 11 G~g~~~~~gd~V~i~y~~~~~~gg~~~~~~ 40 (88)
|.-..+...+.+.+||.++...+| .+++
T Consensus 152 g~t~~p~~~~~~~~HFI~fV~~~G--~LyE 179 (235)
T 1cmx_A 152 GQSEAPEATADTNLHYITYVEENG--GIFE 179 (235)
T ss_dssp SSSCCCCTTSCCSEEEEEEEECSS--EEEE
T ss_pred cCCCCCCCCCCCCeEEEEEEeeCC--EEEE
Confidence 433445567889999999997655 7666
No 72
>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A
Probab=31.53 E-value=32 Score=16.15 Aligned_cols=21 Identities=19% Similarity=0.654 Sum_probs=12.1
Q ss_pred cCCCCCcEEEEEECCCCCCCC
Q 034638 68 MGMQVGEVARLRTKPSSSPWW 88 (88)
Q Consensus 68 ~~m~~G~~~~~~ip~~~a~~~ 88 (88)
..+++||...+.-.....-||
T Consensus 19 Ls~~~Gd~i~v~~~~~~~~Ww 39 (60)
T 2v1q_A 19 LTIKSGDKVYILDDKKSKDWW 39 (60)
T ss_dssp CCBCTTCEEEEEESSSCSSEE
T ss_pred ccCCCCCEEEEEeCCCCCCCE
Confidence 446777777766643334454
No 73
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=31.32 E-value=42 Score=22.50 Aligned_cols=23 Identities=17% Similarity=0.209 Sum_probs=20.2
Q ss_pred ccHHHHhcCCCCCcEEEEEECCC
Q 034638 61 KGWDEGVMGMQVGEVARLRTKPS 83 (88)
Q Consensus 61 ~g~~~al~~m~~G~~~~~~ip~~ 83 (88)
..+.+++..|+.|+..++++++.
T Consensus 336 ~~~~~~~~~~~~g~~~~v~~~~~ 358 (373)
T 1okg_A 336 AEVQSAATHLHAGEAATVYFKSG 358 (373)
T ss_dssp HHHHHHHTTCBTTCEEEEEETTS
T ss_pred HHHHHHHHhcCCCCcEEEEEccC
Confidence 34899999999999999998865
No 74
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=30.36 E-value=48 Score=17.96 Aligned_cols=20 Identities=15% Similarity=0.212 Sum_probs=17.3
Q ss_pred HHHHhcCCCCCcEEEEEECC
Q 034638 63 WDEGVMGMQVGEVARLRTKP 82 (88)
Q Consensus 63 ~~~al~~m~~G~~~~~~ip~ 82 (88)
..++|..|.+|+...|.+.-
T Consensus 43 tkkaL~~l~~Ge~L~Vl~dd 62 (98)
T 1jdq_A 43 TKRALQNMKPGEILEVWIDY 62 (98)
T ss_dssp HHHHHHTCCTTCEEEEEESS
T ss_pred HHHHHHhCCCCCEEEEEECC
Confidence 67899999999999988753
No 75
>1oru_A YUAD protein; structural genomics, cytosolic hypothetical protein, PSI, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.80A {Bacillus subtilis} SCOP: b.58.1.2
Probab=30.30 E-value=29 Score=21.21 Aligned_cols=21 Identities=33% Similarity=0.585 Sum_probs=16.9
Q ss_pred CeEEEEeccCCCCCCCCCCEEEEE
Q 034638 2 GIEKQILTPGNGPKPVAGQKVTVH 25 (88)
Q Consensus 2 Gv~~~vl~~G~g~~~~~gd~V~i~ 25 (88)
|+++++++.|. ++.||.|.+.
T Consensus 162 G~~~rVl~~G~---I~~GD~v~l~ 182 (195)
T 1oru_A 162 GIVCIVERPGA---VYTGDEIEVH 182 (195)
T ss_dssp CEEEEEEECEE---EETTCEEEEE
T ss_pred cEEEEEecCce---EcCCCEEEEE
Confidence 78899988754 7889988875
No 76
>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}
Probab=29.71 E-value=37 Score=15.60 Aligned_cols=21 Identities=14% Similarity=0.406 Sum_probs=12.1
Q ss_pred cCCCCCcEEEEEECCCCCCCC
Q 034638 68 MGMQVGEVARLRTKPSSSPWW 88 (88)
Q Consensus 68 ~~m~~G~~~~~~ip~~~a~~~ 88 (88)
..+++|+...+.-..+..-||
T Consensus 17 Ls~~~Gd~i~v~~~~~~~~W~ 37 (54)
T 2a28_A 17 ISIDPGDIITVIRGDDGSGWT 37 (54)
T ss_dssp CCBCTTCEEEEEECCCSSSEE
T ss_pred ccCCCCCEEEEEEecCCCCEE
Confidence 456777777776654323354
No 77
>1zce_A Hypothetical protein ATU2648; alpha-beta protein., structural genomics, PSI, protein struc initiative; 1.30A {Agrobacterium tumefaciens str} SCOP: b.122.1.8
Probab=29.05 E-value=31 Score=20.72 Aligned_cols=18 Identities=11% Similarity=0.283 Sum_probs=14.2
Q ss_pred HHHhcCCCCCcEEEEEEC
Q 034638 64 DEGVMGMQVGEVARLRTK 81 (88)
Q Consensus 64 ~~al~~m~~G~~~~~~ip 81 (88)
..-|+.|++||.+.|+-.
T Consensus 38 rN~mr~Mk~GD~~fFYHS 55 (155)
T 1zce_A 38 RNNMRAMKIGDKGFFYHS 55 (155)
T ss_dssp HHHHHTCCTTCEEEEEET
T ss_pred HHHHHhccCCCEEEEEEe
Confidence 344678999999999864
No 78
>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1
Probab=28.93 E-value=35 Score=16.45 Aligned_cols=19 Identities=26% Similarity=0.793 Sum_probs=11.1
Q ss_pred CCCCCcEEEEEECCCCCCCC
Q 034638 69 GMQVGEVARLRTKPSSSPWW 88 (88)
Q Consensus 69 ~m~~G~~~~~~ip~~~a~~~ 88 (88)
.+++|+...+.-..+ .-||
T Consensus 7 s~~~Gd~i~v~~~~~-~~Ww 25 (63)
T 1tuc_A 7 TMKKGDILTLLNSTN-KDWW 25 (63)
T ss_dssp CBCTTCEEEEEECCS-SSEE
T ss_pred CCCCCCEEEEEEecC-CCEE
Confidence 456777777666543 3354
No 79
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=28.62 E-value=75 Score=17.16 Aligned_cols=20 Identities=15% Similarity=0.145 Sum_probs=17.6
Q ss_pred HHHHhcCCCCCcEEEEEECC
Q 034638 63 WDEGVMGMQVGEVARLRTKP 82 (88)
Q Consensus 63 ~~~al~~m~~G~~~~~~ip~ 82 (88)
..++|..|++|+...|.+.-
T Consensus 44 tkkaL~~l~~Ge~L~Vl~dd 63 (97)
T 1je3_A 44 TLEAMPQLKKGEILEVVSDC 63 (97)
T ss_dssp HHHHTTTCCSSCEEEEEEBC
T ss_pred HHHHHHcCCCCCEEEEEECC
Confidence 78899999999999988864
No 80
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=28.41 E-value=1.3e+02 Score=20.00 Aligned_cols=49 Identities=14% Similarity=0.184 Sum_probs=32.6
Q ss_pred CCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCC------ccccHHHHhcCCCCCc
Q 034638 15 KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGS------VIKGWDEGVMGMQVGE 74 (88)
Q Consensus 15 ~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~------~~~g~~~al~~m~~G~ 74 (88)
.++.||.|.|++-+.. || =.-|. ..+|.+|... .-.+++.++..+++|-
T Consensus 120 ~L~~GDiV~ID~G~~~-dG---Y~sD~-------arT~~vg~~~~~l~~~~~~al~aai~~~~pG~ 174 (358)
T 3fm3_A 120 VLKEDDVLKIDFGTHS-DG---RIMDS-------AFTVAFKENLEPLLVAAREGTETGIKSLGVDV 174 (358)
T ss_dssp BCCTTCEEEEEEEEEE-TT---EEEEE-------EEEEECCGGGHHHHHHHHHHHHHHHHHCCTTC
T ss_pred EecCCCEEEEEeeEEE-CC---EEEEE-------EEeccccccchhHHHHHHHHHHHHHHhhhcCC
Confidence 3899999999999886 66 44442 4556666321 1345677777777774
No 81
>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens}
Probab=27.95 E-value=24 Score=18.37 Aligned_cols=20 Identities=15% Similarity=0.499 Sum_probs=10.8
Q ss_pred cCCCCCcEEEEEECCCCCCCC
Q 034638 68 MGMQVGEVARLRTKPSSSPWW 88 (88)
Q Consensus 68 ~~m~~G~~~~~~ip~~~a~~~ 88 (88)
+.+++||.+.|+-..+. -||
T Consensus 36 Lsf~~GDiI~V~~~~~~-gWw 55 (83)
T 2ke9_A 36 LNVRAGDVITVLEQHPD-GRW 55 (83)
T ss_dssp CCBCTTCEEEESCSSCS-SCE
T ss_pred ccccCCCEEEEEEecCC-CeE
Confidence 45667776665543332 255
No 82
>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A
Probab=27.92 E-value=41 Score=16.39 Aligned_cols=21 Identities=19% Similarity=0.762 Sum_probs=13.0
Q ss_pred cCCCCCcEEEEEECCCCCCCC
Q 034638 68 MGMQVGEVARLRTKPSSSPWW 88 (88)
Q Consensus 68 ~~m~~G~~~~~~ip~~~a~~~ 88 (88)
+.+++||...|+-.....-||
T Consensus 27 Lsf~~Gd~i~v~~~~~~~~Ww 47 (70)
T 1gcq_C 27 LRLNPGDIVELTKAEAEHNWW 47 (70)
T ss_dssp CCBCTTCEEEEEECCTTCSEE
T ss_pred CCcCCCCEEEEEeCCCCCCCe
Confidence 456788877776653344555
No 83
>2akk_A RP4479, PHNA-like protein; beta-strand protein, structural genomics, PSI, protein struc initiative; NMR {Rhodopseudomonas palustris} SCOP: b.34.11.2
Probab=26.99 E-value=32 Score=18.07 Aligned_cols=23 Identities=17% Similarity=0.062 Sum_probs=17.0
Q ss_pred eccCCCCCCCCCCEEEEEEEEEE
Q 034638 8 LTPGNGPKPVAGQKVTVHCTGYG 30 (88)
Q Consensus 8 l~~G~g~~~~~gd~V~i~y~~~~ 30 (88)
++...|...++||.|.+-=.+..
T Consensus 5 vkDsnGn~L~dGDsVtlIKDLkV 27 (74)
T 2akk_A 5 VRDCNGALLADGDNVSLIKDLKL 27 (74)
T ss_dssp CBCSSCCBCCTTEEEEESSCEEE
T ss_pred EEcCCCCCccCCCEEEEEeeeee
Confidence 45567888999999988655554
No 84
>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.96 E-value=41 Score=17.14 Aligned_cols=21 Identities=14% Similarity=0.544 Sum_probs=13.2
Q ss_pred cCCCCCcEEEEEECCCCCCCC
Q 034638 68 MGMQVGEVARLRTKPSSSPWW 88 (88)
Q Consensus 68 ~~m~~G~~~~~~ip~~~a~~~ 88 (88)
+.+++||...|+-..+..-||
T Consensus 34 Lsf~~Gd~i~v~~~~~~~~Ww 54 (81)
T 1x6g_A 34 LAFRKGDVVTILEACENKSWY 54 (81)
T ss_dssp CCBCTTCEEEEEECCCSSSEE
T ss_pred CCCCCCCEEEEEeccCCCCeE
Confidence 456788887777654443455
No 85
>1yfb_A Transition state regulatory protein ABRB; , homodimer, bioinformatics, swapped-hairpin barrel, transcription; NMR {Bacillus subtilis} SCOP: b.129.1.3 PDB: 1ysf_A 2k1n_A* 1z0r_A 2ro4_A 2fy9_A 2ro3_A
Probab=26.96 E-value=64 Score=15.83 Aligned_cols=22 Identities=5% Similarity=0.052 Sum_probs=16.4
Q ss_pred cccHHHHhcCCCCCcEEEEEECC
Q 034638 60 IKGWDEGVMGMQVGEVARLRTKP 82 (88)
Q Consensus 60 ~~g~~~al~~m~~G~~~~~~ip~ 82 (88)
+..+.+.| ++++||+..+.+-.
T Consensus 27 PkeiR~~L-gi~~Gd~l~i~~~~ 48 (59)
T 1yfb_A 27 PIELRRTL-GIAEKDALEIYVDD 48 (59)
T ss_dssp CHHHHHHT-TCCTTCEEEEEEET
T ss_pred CHHHHHHc-CCCCCCEEEEEEEC
Confidence 45676665 89999999887643
No 86
>3u7z_A Putative metal binding protein rumgna_00854; the binding protein, transport protein, structural genomics, center for structural genomics; 1.30A {Ruminococcus gnavus}
Probab=26.67 E-value=73 Score=17.53 Aligned_cols=13 Identities=8% Similarity=0.087 Sum_probs=11.3
Q ss_pred CCCCCEEEEEEEE
Q 034638 16 PVAGQKVTVHCTG 28 (88)
Q Consensus 16 ~~~gd~V~i~y~~ 28 (88)
+++||.|.+.|+.
T Consensus 87 v~dGD~i~~~~t~ 99 (101)
T 3u7z_A 87 VSDGDAFELTLKE 99 (101)
T ss_dssp CCTTCEEEEEEEE
T ss_pred ecCCCEEEEEEec
Confidence 8999999998874
No 87
>1o65_A Hypothetical protein YIIM; structural genomics, unknown function; 2.33A {Escherichia coli} SCOP: b.58.1.2 PDB: 1o67_A
Probab=26.52 E-value=25 Score=22.54 Aligned_cols=22 Identities=18% Similarity=0.336 Sum_probs=17.7
Q ss_pred CeEEEEeccCCCCCCCCCCEEEEEE
Q 034638 2 GIEKQILTPGNGPKPVAGQKVTVHC 26 (88)
Q Consensus 2 Gv~~~vl~~G~g~~~~~gd~V~i~y 26 (88)
|++++|++.|. ++.||.|.+.-
T Consensus 155 G~y~rVl~~G~---V~~GD~v~l~~ 176 (246)
T 1o65_A 155 GWLYSVIAPGK---VSADAPLELVS 176 (246)
T ss_dssp CEEEEEEECEE---EETTSCEEEEE
T ss_pred EEEEEEeeCcE---EcCCCEEEEec
Confidence 89999998654 78899888763
No 88
>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A
Probab=26.17 E-value=34 Score=16.93 Aligned_cols=15 Identities=13% Similarity=0.350 Sum_probs=9.4
Q ss_pred cCCCCCcEEEEEECC
Q 034638 68 MGMQVGEVARLRTKP 82 (88)
Q Consensus 68 ~~m~~G~~~~~~ip~ 82 (88)
..+++||...+.-..
T Consensus 23 Ls~~~Gd~i~v~~~~ 37 (65)
T 2lj0_A 23 LELRDGDIVDVMEKC 37 (65)
T ss_dssp CCBCTTCEEEEEEEC
T ss_pred cCCCCCCEEEEeEeC
Confidence 456777777665443
No 89
>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A
Probab=25.97 E-value=43 Score=15.64 Aligned_cols=14 Identities=0% Similarity=-0.251 Sum_probs=8.8
Q ss_pred cCCCCCcEEEEEEC
Q 034638 68 MGMQVGEVARLRTK 81 (88)
Q Consensus 68 ~~m~~G~~~~~~ip 81 (88)
..+++||...+.-.
T Consensus 17 Ls~~~Gd~i~v~~~ 30 (58)
T 1jo8_A 17 LTFVENDKIINIEF 30 (58)
T ss_dssp CCBCTTCEEEEEEC
T ss_pred cccCCCCEEEEEEe
Confidence 34667777666554
No 90
>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A
Probab=25.71 E-value=36 Score=15.82 Aligned_cols=15 Identities=13% Similarity=0.379 Sum_probs=9.0
Q ss_pred cCCCCCcEEEEEECC
Q 034638 68 MGMQVGEVARLRTKP 82 (88)
Q Consensus 68 ~~m~~G~~~~~~ip~ 82 (88)
..+++||...+.-..
T Consensus 18 Ls~~~Gd~i~v~~~~ 32 (58)
T 1zuy_A 18 LPLKKGDVIYITREE 32 (58)
T ss_dssp CCBCTTCEEEEEEEC
T ss_pred CCCCCCCEEEEEEec
Confidence 446677776665543
No 91
>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.41 E-value=42 Score=16.88 Aligned_cols=21 Identities=14% Similarity=0.275 Sum_probs=12.8
Q ss_pred cCCCCCcEEEEEECCCCCCCC
Q 034638 68 MGMQVGEVARLRTKPSSSPWW 88 (88)
Q Consensus 68 ~~m~~G~~~~~~ip~~~a~~~ 88 (88)
..+++||...|+-..+..-||
T Consensus 30 Ls~~~Gd~i~v~~~~~~~~Ww 50 (78)
T 2dl5_A 30 LTIEEHEVLEVIEDGDMEDWV 50 (78)
T ss_dssp CCBCSSEEEEEEECCSSSSEE
T ss_pred CCCCCCCEEEEEeccCCCCcE
Confidence 456778777776654334455
No 92
>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}
Probab=25.37 E-value=46 Score=16.20 Aligned_cols=21 Identities=19% Similarity=0.654 Sum_probs=11.7
Q ss_pred cCCCCCcEEEEEECCCCCCCC
Q 034638 68 MGMQVGEVARLRTKPSSSPWW 88 (88)
Q Consensus 68 ~~m~~G~~~~~~ip~~~a~~~ 88 (88)
..+++|+...+.-.....-||
T Consensus 23 Ls~~~Gd~i~v~~~~~~~~Ww 43 (71)
T 2jt4_A 23 LTIKSGDKVYILDDKKSKDWW 43 (71)
T ss_dssp CCBCTTCEEEEEESSSCSSEE
T ss_pred ccCCCCCEEEEEECCCCCCCE
Confidence 446677776666544233454
No 93
>2gbs_A Hypothetical protein RPA0253; alpha-beta, RPR3, NESG, structural genomics, COG294 protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: b.122.1.8
Probab=25.34 E-value=29 Score=20.57 Aligned_cols=18 Identities=17% Similarity=0.156 Sum_probs=14.1
Q ss_pred HHHhcCCCCCcEEEEEEC
Q 034638 64 DEGVMGMQVGEVARLRTK 81 (88)
Q Consensus 64 ~~al~~m~~G~~~~~~ip 81 (88)
..-|+.|++||.+.|+-.
T Consensus 37 rn~mr~Mk~GD~~ffYHS 54 (145)
T 2gbs_A 37 KLHMVAMRRGDRAFYYHS 54 (145)
T ss_dssp HHHHHHCCTTCEEEEEET
T ss_pred HHHHHhcCCCCEEEEEEe
Confidence 344667999999998864
No 94
>2pqh_A Spectrin alpha chain, brain; SH3 domain, chimera, , structural protein; 1.75A {Gallus gallus}
Probab=25.25 E-value=42 Score=16.97 Aligned_cols=20 Identities=25% Similarity=0.780 Sum_probs=11.1
Q ss_pred cCCCCCcEEEEEECCCCCCCC
Q 034638 68 MGMQVGEVARLRTKPSSSPWW 88 (88)
Q Consensus 68 ~~m~~G~~~~~~ip~~~a~~~ 88 (88)
+.+++||...++-..+ .-||
T Consensus 19 Ls~~~Gd~i~v~~~~~-~~Ww 38 (80)
T 2pqh_A 19 VTMKKGDILTLLNSTN-KDWW 38 (80)
T ss_dssp CCBCTTCEEEEEECCS-SSEE
T ss_pred cCCCCCCEEEEEEecC-CCEE
Confidence 3466777766665433 3354
No 95
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=24.88 E-value=1.3e+02 Score=18.71 Aligned_cols=51 Identities=18% Similarity=0.133 Sum_probs=35.0
Q ss_pred CCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCC---------CccccHHHHhcCCCCCcE
Q 034638 14 PKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKG---------SVIKGWDEGVMGMQVGEV 75 (88)
Q Consensus 14 ~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~---------~~~~g~~~al~~m~~G~~ 75 (88)
..++.||.|.+++-+.. +| =.-| -..+|.+|.. .+..+.+.++..+|+|-+
T Consensus 83 ~~l~~Gdlv~iD~g~~~-~G---Y~sD-------~tRT~~vG~~~~~~~~l~~~v~~a~~~~i~~~kpG~~ 142 (264)
T 3tb5_A 83 KVLKDGDLIKVDMCVDL-KG---AISD-------SCWSYVVGESTPEIDRLMEVTKKALYLGIEQAQVGNR 142 (264)
T ss_dssp CBCCTTCEEEEEEEEEE-TT---EEEE-------EEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCCTTCB
T ss_pred ccccCCCEEEEecccee-cc---eeee-------cccccccCCccHHHHHHHHHHHHHHHHHHhhhCCCCC
Confidence 34899999999998775 55 2222 2455666643 235778888999999854
No 96
>2jk8_A BEPA, putative cell filamentation protein (BEPA protein; T4SS, OB fold, FIC domain, substrate protein, protein transl cell adhesion; 2.80A {Bartonella henselae} PDB: 2vy3_A 2vza_A*
Probab=24.78 E-value=1.5e+02 Score=19.30 Aligned_cols=17 Identities=12% Similarity=0.186 Sum_probs=15.7
Q ss_pred HHhcCCCCCcEEEEEEC
Q 034638 65 EGVMGMQVGEVARLRTK 81 (88)
Q Consensus 65 ~al~~m~~G~~~~~~ip 81 (88)
|-|+.+|.|++.+|++|
T Consensus 285 e~~~~l~~~~~~~~~~~ 301 (302)
T 2jk8_A 285 EQLKILKPGDKITFTAP 301 (302)
T ss_dssp HHHHTCCTTCEEEEECC
T ss_pred HHHhccCCCCEEEEEeC
Confidence 78899999999999987
No 97
>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=24.37 E-value=36 Score=15.86 Aligned_cols=14 Identities=14% Similarity=0.259 Sum_probs=8.0
Q ss_pred CCCCCcEEEEEECC
Q 034638 69 GMQVGEVARLRTKP 82 (88)
Q Consensus 69 ~m~~G~~~~~~ip~ 82 (88)
.+++||...+.-..
T Consensus 19 s~~~Gd~i~v~~~~ 32 (58)
T 1zuu_A 19 TITPGDKISLVARD 32 (58)
T ss_dssp CBCTTCCEEEEECC
T ss_pred cCCCCCEEEEeEcC
Confidence 45666666665544
No 98
>2l55_A SILB,silver efflux protein, MFP component of the components proton antiporter metal...; APO form, AG(I)-binding site; NMR {Cupriavidus metallidurans}
Probab=24.35 E-value=84 Score=16.41 Aligned_cols=16 Identities=19% Similarity=0.065 Sum_probs=12.6
Q ss_pred CCCCCCCEEEEEEEEE
Q 034638 14 PKPVAGQKVTVHCTGY 29 (88)
Q Consensus 14 ~~~~~gd~V~i~y~~~ 29 (88)
..++.||.|.+.+.-.
T Consensus 46 ~~lk~Gd~V~F~~~~~ 61 (82)
T 2l55_A 46 QGLKAGDRVAFSFRLD 61 (82)
T ss_dssp SSCSTTCEEEEEEEEE
T ss_pred hcCCCCCEEEEEEEEC
Confidence 3389999999988654
No 99
>3r8s_P 50S ribosomal protein L19; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_N 1p86_N 2awb_P 2gya_N 2gyc_N 2aw4_P 2i2v_P 2j28_P 2i2t_P* 2qao_P* 2qba_P* 2qbc_P* 2qbe_P 2qbg_P 2qbi_P* 2qbk_P* 2qov_P 2qox_P 2qoz_P* 2qp1_P* ...
Probab=24.29 E-value=90 Score=17.67 Aligned_cols=16 Identities=19% Similarity=0.019 Sum_probs=13.5
Q ss_pred CCCCCCEEEEEEEEEE
Q 034638 15 KPVAGQKVTVHCTGYG 30 (88)
Q Consensus 15 ~~~~gd~V~i~y~~~~ 30 (88)
....||.|.++|...-
T Consensus 18 ~f~~GDtv~V~~~i~E 33 (114)
T 3r8s_P 18 SFRPGDTVEVKVWVVE 33 (114)
T ss_dssp CCCTTCEEEEEEEEEE
T ss_pred ccCCCCEEEEEEEEec
Confidence 3789999999998763
No 100
>3v10_A Rhusiopathiae surface protein B; collagen HUG model, DEV-IGG collagen binding protein, cell adhesion; 1.75A {Erysipelothrix rhusiopathiae}
Probab=24.28 E-value=43 Score=21.47 Aligned_cols=17 Identities=12% Similarity=0.243 Sum_probs=14.8
Q ss_pred cCCCCCcEEEEEECCCC
Q 034638 68 MGMQVGEVARLRTKPSS 84 (88)
Q Consensus 68 ~~m~~G~~~~~~ip~~~ 84 (88)
..+|+||...|.+|.++
T Consensus 43 ~~ik~GDt~ti~LP~~l 59 (321)
T 3v10_A 43 VKFKPGDFFDLTLPSND 59 (321)
T ss_dssp CCCCTTCEEEEECCBCS
T ss_pred ceeCCCCEEEEEcCCCe
Confidence 36999999999999875
No 101
>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus} SCOP: b.34.2.1
Probab=24.15 E-value=67 Score=16.00 Aligned_cols=21 Identities=19% Similarity=0.762 Sum_probs=12.8
Q ss_pred cCCCCCcEEEEEECCCCCCCC
Q 034638 68 MGMQVGEVARLRTKPSSSPWW 88 (88)
Q Consensus 68 ~~m~~G~~~~~~ip~~~a~~~ 88 (88)
+.+++||...|+-.....-||
T Consensus 35 Lsf~~Gd~i~v~~~~~~~gWw 55 (78)
T 1k1z_A 35 LRLNPGDIVELTKAEAEHNWW 55 (78)
T ss_dssp CCBCTTCEEEEEECCSSCSCE
T ss_pred cCCCCCCEEEEEEcCCCCCeE
Confidence 456778877776653244455
No 102
>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1
Probab=24.00 E-value=46 Score=16.09 Aligned_cols=13 Identities=15% Similarity=0.181 Sum_probs=8.1
Q ss_pred CCCCCcEEEEEEC
Q 034638 69 GMQVGEVARLRTK 81 (88)
Q Consensus 69 ~m~~G~~~~~~ip 81 (88)
.+++|+...+.-.
T Consensus 20 s~~~Gd~i~v~~~ 32 (67)
T 1gl5_A 20 RLERGQEYIILEK 32 (67)
T ss_dssp CBCTTCEEEEEEC
T ss_pred cCCcCCEEEEEEc
Confidence 4566776666654
No 103
>3rgc_A Possible periplasmic protein; ppiase, chaperone; 2.30A {Campylobacter jejuni}
Probab=23.88 E-value=26 Score=21.88 Aligned_cols=22 Identities=9% Similarity=-0.002 Sum_probs=18.8
Q ss_pred CCCCccccHHHHhcCCCCCcEE
Q 034638 55 GKGSVIKGWDEGVMGMQVGEVA 76 (88)
Q Consensus 55 G~~~~~~g~~~al~~m~~G~~~ 76 (88)
..+.+.+.|..++..|++|+..
T Consensus 168 ~~~~l~~~~~~a~~~l~~G~is 189 (252)
T 3rgc_A 168 NTSNADPRLLGLLSQIPVGSFS 189 (252)
T ss_dssp ETTTSCHHHHHHHHHSCTTCBC
T ss_pred cHHhcCHHHHHHHHcCCCCCcC
Confidence 3478999999999999999854
No 104
>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}
Probab=23.65 E-value=70 Score=15.48 Aligned_cols=20 Identities=15% Similarity=0.539 Sum_probs=11.0
Q ss_pred cCCCCCcEEEEEECCCCCCCC
Q 034638 68 MGMQVGEVARLRTKPSSSPWW 88 (88)
Q Consensus 68 ~~m~~G~~~~~~ip~~~a~~~ 88 (88)
..+++||...+.-.. ..-||
T Consensus 18 Ls~~~Gd~i~v~~~~-~~~Ww 37 (65)
T 2nwm_A 18 LTLQKGDIVYIHKEV-DKNWL 37 (65)
T ss_dssp CCBCTTCEEEEEECC-TTTCE
T ss_pred cCCcCCCEEEEEEec-CCCEE
Confidence 356777777665432 23354
No 105
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=23.62 E-value=1.5e+02 Score=19.03 Aligned_cols=51 Identities=10% Similarity=0.046 Sum_probs=34.7
Q ss_pred CCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCC------ccccHHHHhcCCCCCcE
Q 034638 14 PKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGS------VIKGWDEGVMGMQVGEV 75 (88)
Q Consensus 14 ~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~------~~~g~~~al~~m~~G~~ 75 (88)
..+++||.|.+++-+.. +| =.-| -..+|.+|... +..+++.++..+++|-+
T Consensus 71 ~~L~~GDiv~iD~G~~~-~G---Y~sD-------~tRT~~vG~~~~~l~~~~~~a~~~~i~~~kpG~~ 127 (295)
T 1xgs_A 71 TVLKEGDYLKIDVGVHI-DG---FIAD-------TAVTVRVGMEEDELMEAAKEALNAAISVARAGVE 127 (295)
T ss_dssp CBCCTTCEEEEEEEEEE-TT---EEEE-------EEEEEETTSCCCHHHHHHHHHHHHHHHHCSTTCB
T ss_pred ccccCCCEEEEEEeEEE-CC---EEEE-------EEEEEEeCHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 45899999999999886 55 3333 24566666421 34677888888888743
No 106
>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A
Probab=23.62 E-value=44 Score=15.90 Aligned_cols=21 Identities=29% Similarity=0.553 Sum_probs=11.4
Q ss_pred cCCCCCcEEEEEECCCCCCCC
Q 034638 68 MGMQVGEVARLRTKPSSSPWW 88 (88)
Q Consensus 68 ~~m~~G~~~~~~ip~~~a~~~ 88 (88)
..+++|+...+.-.....-||
T Consensus 18 Ls~~~Gd~i~v~~~~~~~~Ww 38 (62)
T 2j6f_A 18 LTIRVGEIIRNVKKLQEEGWL 38 (62)
T ss_dssp CCBCTTCEEEEEEECSSTTEE
T ss_pred cCCcCCCEEEEEEecCCCCEE
Confidence 446777776666542233344
No 107
>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1
Probab=23.59 E-value=48 Score=16.22 Aligned_cols=20 Identities=25% Similarity=0.780 Sum_probs=11.8
Q ss_pred cCCCCCcEEEEEECCCCCCCC
Q 034638 68 MGMQVGEVARLRTKPSSSPWW 88 (88)
Q Consensus 68 ~~m~~G~~~~~~ip~~~a~~~ 88 (88)
..+++||...++-..+ .-||
T Consensus 22 Ls~~~Gd~i~v~~~~~-~~Ww 41 (73)
T 3thk_A 22 VTMKKGDILTLLNSTN-KDWW 41 (73)
T ss_dssp CCBCTTCEEEEEECCS-SSEE
T ss_pred cCCCCCCEEEEEECCC-CCeE
Confidence 4667777777665543 3354
No 108
>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1
Probab=23.04 E-value=45 Score=16.33 Aligned_cols=21 Identities=14% Similarity=0.449 Sum_probs=11.2
Q ss_pred cCCCCCcEEEEEECCCCCCCC
Q 034638 68 MGMQVGEVARLRTKPSSSPWW 88 (88)
Q Consensus 68 ~~m~~G~~~~~~ip~~~a~~~ 88 (88)
..+++||...+.-.....-||
T Consensus 28 Ls~~~Gd~i~v~~~~~~~~Ww 48 (71)
T 1csk_A 28 LPFCKGDVLTIVAVTKDPNWY 48 (71)
T ss_dssp CCBCTTCEEEEEEECSSTTEE
T ss_pred CCCCCCCEEEEeECCCCCCCE
Confidence 345677776666522333454
No 109
>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.00 E-value=42 Score=16.79 Aligned_cols=21 Identities=10% Similarity=0.350 Sum_probs=11.8
Q ss_pred cCCCCCcEEEEEECCCCCCCC
Q 034638 68 MGMQVGEVARLRTKPSSSPWW 88 (88)
Q Consensus 68 ~~m~~G~~~~~~ip~~~a~~~ 88 (88)
+.+++|+...|+-.....-||
T Consensus 31 Lsf~~Gd~i~v~~~~~~~gWw 51 (75)
T 2ege_A 31 LALRAGDVVMVYGPMDDQGFY 51 (75)
T ss_dssp CCBCTTCEEEEESCCCTTCEE
T ss_pred ceECCCCEEEEeEccCCCCEE
Confidence 446777777666433344454
No 110
>2kgj_A Peptidyl-prolyl CIS-trans isomerase D; prolyl isomerase, parvulin, cell inner membrane, cell membrane, membrane, rotamase, stress response; NMR {Escherichia coli}
Probab=22.97 E-value=50 Score=17.76 Aligned_cols=21 Identities=5% Similarity=0.200 Sum_probs=18.0
Q ss_pred CCCccccHHHHhcCCCCCcEEE
Q 034638 56 KGSVIKGWDEGVMGMQVGEVAR 77 (88)
Q Consensus 56 ~~~~~~g~~~al~~m~~G~~~~ 77 (88)
.+.+.+.|++++.. ++|+...
T Consensus 57 ~~~l~~~f~~a~~~-~~GeiS~ 77 (102)
T 2kgj_A 57 DATIPDELKNAGLK-EKGQLSG 77 (102)
T ss_dssp TTCCCHHHHTTCCC-STTCEEE
T ss_pred ccccCHHHHHHHhc-CCCCccc
Confidence 46789999999999 9998754
No 111
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=22.81 E-value=1.8e+02 Score=19.51 Aligned_cols=51 Identities=14% Similarity=0.168 Sum_probs=34.3
Q ss_pred CCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCC------CccccHHHHhcCCCCCcE
Q 034638 14 PKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKG------SVIKGWDEGVMGMQVGEV 75 (88)
Q Consensus 14 ~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~------~~~~g~~~al~~m~~G~~ 75 (88)
..++.||.|.+++-+.. +| =.-|. ..+|.++.. .+..+.+.++..+++|-+
T Consensus 121 ~~L~~GDlV~ID~G~~~-~G---Y~sD~-------tRT~~v~~~~~~l~~av~eA~~aai~~~kPGv~ 177 (360)
T 2nw5_A 121 IVLKEDDVLKIDFGTHS-DG---RIMDS-------AFTVAFKENLEPLLVAAREGTETGIKSLGVDVR 177 (360)
T ss_dssp CBCCTTCEEEEEEEEEE-TT---EEEEE-------EEEEECCGGGHHHHHHHHHHHHHHHHHCCTTCB
T ss_pred cCcCCCCEEEEEEEEEE-CC---EEEEE-------EEEEEcCHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 34899999999998875 66 44443 344445422 135678888888888843
No 112
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=22.78 E-value=1.7e+02 Score=19.25 Aligned_cols=51 Identities=22% Similarity=0.144 Sum_probs=35.3
Q ss_pred CCCCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCC---------CccccHHHHhcCCCCCcE
Q 034638 14 PKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKG---------SVIKGWDEGVMGMQVGEV 75 (88)
Q Consensus 14 ~~~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~---------~~~~g~~~al~~m~~G~~ 75 (88)
..++.||.|.+++.+.. +| =.-| -..+|.+|.. .+..+.+.++..+++|-+
T Consensus 154 ~~L~~GDiv~iD~G~~~-~G---Y~sD-------~tRT~~vG~~~~~~~~l~~~v~~a~~~ai~~~kPG~~ 213 (329)
T 2b3h_A 154 RPLQEGDIVNVDITLYR-NG---YHGD-------LNETFFVGEVDDGARKLVQTTYECLMQAIDAVKPGVR 213 (329)
T ss_dssp CBCCTTCEEEEEEEEEE-TT---EEEE-------EEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCCTTCB
T ss_pred cCCCCCCEEEEEeeEEE-CC---EEEe-------eEEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 34899999999999986 55 2222 2456667642 245778888889998853
No 113
>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.26 E-value=76 Score=15.55 Aligned_cols=21 Identities=19% Similarity=0.601 Sum_probs=12.9
Q ss_pred cCCCCCcEEEEEECC--CCCCCC
Q 034638 68 MGMQVGEVARLRTKP--SSSPWW 88 (88)
Q Consensus 68 ~~m~~G~~~~~~ip~--~~a~~~ 88 (88)
+.+++||...++-.. ...-||
T Consensus 25 Lsf~~Gd~i~v~~~~~~~~~~Ww 47 (73)
T 2dl7_A 25 LSFPEGAIIRILNKENQDDDGFW 47 (73)
T ss_dssp CCBCTTCEEEEEECCCSSSSSCE
T ss_pred CCCCCCCEEEEEECCCCCCCCcE
Confidence 556778877776542 244565
No 114
>3rfw_A Cell-binding factor 2; SURA-like, chaperone; 2.20A {Campylobacter jejuni}
Probab=21.85 E-value=33 Score=21.37 Aligned_cols=23 Identities=9% Similarity=0.466 Sum_probs=19.5
Q ss_pred eCCCCccccHHHHhcCCCCCcEE
Q 034638 54 IGKGSVIKGWDEGVMGMQVGEVA 76 (88)
Q Consensus 54 lG~~~~~~g~~~al~~m~~G~~~ 76 (88)
+..+++.+.|+.++..|++|+..
T Consensus 168 ~~~~~l~~~f~~a~~~l~~G~is 190 (252)
T 3rfw_A 168 FDQSTMVKPFTDAAFALKNGTIT 190 (252)
T ss_dssp ECSSSSCHHHHHHHHHSCTTEEC
T ss_pred cccccccHHHHHHHHcCCCCCcc
Confidence 34478999999999999999865
No 115
>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}
Probab=21.81 E-value=33 Score=16.76 Aligned_cols=12 Identities=25% Similarity=0.448 Sum_probs=7.3
Q ss_pred cCCCCCcEEEEE
Q 034638 68 MGMQVGEVARLR 79 (88)
Q Consensus 68 ~~m~~G~~~~~~ 79 (88)
..+++||...++
T Consensus 21 Ls~~~Gd~i~v~ 32 (60)
T 2lx7_A 21 LRFAAGELITLL 32 (60)
T ss_dssp CCCCTTCEEEBS
T ss_pred ccCCCCCEEEEe
Confidence 456777766554
No 116
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=21.73 E-value=2.2e+02 Score=20.36 Aligned_cols=62 Identities=11% Similarity=0.135 Sum_probs=35.2
Q ss_pred CeEEEEeccCCCCC--CCCCCEEEEEEEEEEeCCCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcCCCCCcEEEEE
Q 034638 2 GIEKQILTPGNGPK--PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLR 79 (88)
Q Consensus 2 Gv~~~vl~~G~g~~--~~~gd~V~i~y~~~~~~gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~G~~~~~~ 79 (88)
|++..-+.+|+.+. ++.||.|. ..|| +.+.+.-+ +.+.. .-...|...+...++|+++.+.
T Consensus 278 Gv~V~~V~~~spA~~al~~GDvI~------~idg---~~V~~~g~-----~~~~~---~~~~~l~~~v~~~~~Gd~v~l~ 340 (539)
T 4fln_A 278 GVLVRRVEPTSDASKVLKEGDVIV------SFDD---LHVGCEGT-----VPFRS---SERIAFRYLISQKFAGDIAEIG 340 (539)
T ss_dssp CEEEEEECTTSGGGGTCCTTCEEE------EETT---EECBSSSE-----EECST---TCEEETHHHHHTSCTTCEEEEE
T ss_pred ceeeecccCCChHHhCccCCCEEE------EECC---EEeCcCCe-----ecccc---chhHHHHHHHHcCCCCCEEEEE
Confidence 56666666665332 88899774 2356 66654221 11110 1122466777888888887766
Q ss_pred E
Q 034638 80 T 80 (88)
Q Consensus 80 i 80 (88)
|
T Consensus 341 v 341 (539)
T 4fln_A 341 I 341 (539)
T ss_dssp E
T ss_pred E
Confidence 5
No 117
>2vqe_L 30S ribosomal protein S12, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: i.1.1.1 PDB: 1gix_O* 1hnw_L* 1hnx_L* 1hnz_L* 1hr0_L 1ibk_L* 1ibl_L* 1ibm_L 1j5e_L 1jgo_O* 1jgp_O* 1jgq_O* 1mj1_O* 1ml5_O* 1mvr_O 1n32_L* 1n33_L* 1n34_L 1n36_L 1xmo_L* ...
Probab=21.66 E-value=1.3e+02 Score=17.55 Aligned_cols=24 Identities=25% Similarity=0.375 Sum_probs=18.7
Q ss_pred CeEEEEeccCCCCCCCCCCEEEEE
Q 034638 2 GIEKQILTPGNGPKPVAGQKVTVH 25 (88)
Q Consensus 2 Gv~~~vl~~G~g~~~~~gd~V~i~ 25 (88)
|.......+|+|..+++.|.|.|.
T Consensus 63 gk~VtAyIPG~GhnlqEhs~VLVr 86 (135)
T 2vqe_L 63 GYEVTAYIPGEGHNLQEHSVVLIR 86 (135)
T ss_dssp SCEEEEECCSSCCCCCTTCEEEEE
T ss_pred CCEEEEEcCCCCCccCcCCEEEEc
Confidence 334455678999889999999987
No 118
>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}
Probab=21.39 E-value=44 Score=16.93 Aligned_cols=21 Identities=10% Similarity=0.460 Sum_probs=11.1
Q ss_pred cCCCCCcEEEEEECCCCCCCC
Q 034638 68 MGMQVGEVARLRTKPSSSPWW 88 (88)
Q Consensus 68 ~~m~~G~~~~~~ip~~~a~~~ 88 (88)
+.+++||...++-..+..-||
T Consensus 27 Lsf~~Gd~i~v~~~~~~~gWw 47 (80)
T 2i0n_A 27 LPFKRNDIITITFKDQENKWF 47 (80)
T ss_dssp CCBCSSEEEEEEEESSSSSEE
T ss_pred cCCCCCCEEEEEEecCCCCEE
Confidence 445667666665544333254
No 119
>1eh1_A Ribosome recycling factor; translation, hinge variability; 2.60A {Thermus thermophilus} SCOP: d.67.3.1 PDB: 2qbe_6 2qbg_6 2qbi_6* 2qbk_6* 2v46_Y* 2v48_Y* 2z4l_6* 2z4n_6* 3j0d_J 3j0e_G
Probab=21.36 E-value=26 Score=21.56 Aligned_cols=60 Identities=13% Similarity=0.191 Sum_probs=38.7
Q ss_pred CCCCCEEEEEEEEEEeCCCceeeEec----cCCCCCccEEEEeCCCCccccHHHHhcCCCC-------CcEEEEEECC
Q 034638 16 PVAGQKVTVHCTGYGKNGDLSQKFWS----TKDPGQQPFTFQIGKGSVIKGWDEGVMGMQV-------GEVARLRTKP 82 (88)
Q Consensus 16 ~~~gd~V~i~y~~~~~~gg~~~~~~~----t~~~~~~p~~~~lG~~~~~~g~~~al~~m~~-------G~~~~~~ip~ 82 (88)
|..=|.|.|+|-+.. ..+.+ +-. +.+.+.++.-+..+++.++.|+..-.. |...++.+|+
T Consensus 35 p~lld~I~V~yyG~~------~pL~qvA~Isv~-~~r~l~I~p~D~~~i~~IekAI~~SdLglnP~~dG~~Iri~iP~ 105 (185)
T 1eh1_A 35 PALLLHLKVEYYGAH------VPLNQIATVTAP-DPRTLVVQSWDQNALKAIEKAIRDSDLGLNPSNKGDALYINIPP 105 (185)
T ss_dssp SGGGTSCEEEETTEE------EEGGGTCEEECS-STTEEEEECSSHHHHHHHHHHHSSSTTCCCEEEETTEEEEECCC
T ss_pred HHHhCCeEEEeCCCC------ccHHHceeeecC-CCCEEEEecCCHhHHHHHHHHHHHcCCCCCcccCCCEEEEeCCC
Confidence 666678888885432 11111 111 123677777777889999999986654 4678888886
No 120
>2l66_A SSO7C4, transcriptional regulator, ABRB family; DNA binding protein, transcription regulator; NMR {Sulfolobus solfataricus}
Probab=21.30 E-value=78 Score=14.83 Aligned_cols=23 Identities=4% Similarity=0.164 Sum_probs=17.1
Q ss_pred ccccHHHHhcCCCCCcEEEEEECC
Q 034638 59 VIKGWDEGVMGMQVGEVARLRTKP 82 (88)
Q Consensus 59 ~~~g~~~al~~m~~G~~~~~~ip~ 82 (88)
++..+.+.| ++++|+...+.+-.
T Consensus 16 IPk~ir~~l-gi~~Gd~v~i~~~~ 38 (53)
T 2l66_A 16 IPAKVRQKF-QIKEGDLVKVTFDE 38 (53)
T ss_dssp CCHHHHHHS-CCCTTCEEEEEECS
T ss_pred eCHHHHHHc-CcCCCCEEEEEEEC
Confidence 355676665 88999999888754
No 121
>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}
Probab=21.20 E-value=47 Score=16.10 Aligned_cols=15 Identities=20% Similarity=0.414 Sum_probs=9.4
Q ss_pred cCCCCCcEEEEEECC
Q 034638 68 MGMQVGEVARLRTKP 82 (88)
Q Consensus 68 ~~m~~G~~~~~~ip~ 82 (88)
..+++|+...++-..
T Consensus 23 Ls~~~Gd~i~v~~~~ 37 (69)
T 4esr_A 23 LTIHRGDIIRVFFKD 37 (69)
T ss_dssp CCBCTTCEEEEEEEC
T ss_pred CCCCCCCEEEEEEec
Confidence 456777777666443
No 122
>2eve_A Hypothetical protein pspto5229; alpha-beta protein, structural genomics, PSI, protein struct initiative; HET: MPO; 1.60A {Pseudomonas syringae PV} SCOP: b.122.1.8 PDB: 2g2x_A
Probab=21.17 E-value=39 Score=20.31 Aligned_cols=18 Identities=11% Similarity=-0.025 Sum_probs=14.0
Q ss_pred HHHhcCCCCCcEEEEEEC
Q 034638 64 DEGVMGMQVGEVARLRTK 81 (88)
Q Consensus 64 ~~al~~m~~G~~~~~~ip 81 (88)
..-|+.|++||.+.|+=.
T Consensus 35 rN~mr~Mk~GD~~ffYHS 52 (157)
T 2eve_A 35 RNFLRTMAEGDEFFFYHS 52 (157)
T ss_dssp HHHHHHCCTTCEEEEEEC
T ss_pred HHHHHhcCCCCEEEEEec
Confidence 455678999999988743
No 123
>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*
Probab=21.05 E-value=57 Score=15.95 Aligned_cols=20 Identities=20% Similarity=0.699 Sum_probs=12.0
Q ss_pred cCCCCCcEEEEEECCCCCCCC
Q 034638 68 MGMQVGEVARLRTKPSSSPWW 88 (88)
Q Consensus 68 ~~m~~G~~~~~~ip~~~a~~~ 88 (88)
..+++||...++-..+ .-||
T Consensus 32 Ls~~~Gd~i~v~~~~~-~~Ww 51 (73)
T 3h0h_A 32 LSFHKGEKFQILNSSE-GDWW 51 (73)
T ss_dssp CCBCTTCEEEEEECSS-SSEE
T ss_pred ceEeCCCEEEEEEecC-CCeE
Confidence 4677788777665432 3355
No 124
>3v2d_T 50S ribosomal protein L19; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 2hgq_S 2hgj_S 2hgu_S 2j03_T 2jl6_T 2jl8_T 2v47_T 2v49_T 2wdi_T 2wdj_T 2wdl_T 2wdn_T 2wh2_T 2wh4_T 2wrj_T 2wrl_T 2wro_T 2wrr_T 2x9s_T 2x9u_T ...
Probab=20.68 E-value=1.1e+02 Score=18.09 Aligned_cols=15 Identities=20% Similarity=0.089 Sum_probs=13.2
Q ss_pred CCCCCCEEEEEEEEE
Q 034638 15 KPVAGQKVTVHCTGY 29 (88)
Q Consensus 15 ~~~~gd~V~i~y~~~ 29 (88)
....||.|.++|...
T Consensus 21 ~F~~GDtV~V~~~i~ 35 (146)
T 3v2d_T 21 EFRPGDTVRVSYKVK 35 (146)
T ss_dssp CCCTTCEEEEEEEEE
T ss_pred CcCCCCEEEEEEEEc
Confidence 378999999999986
No 125
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=20.68 E-value=37 Score=19.92 Aligned_cols=24 Identities=17% Similarity=0.075 Sum_probs=17.6
Q ss_pred EeccCCCCCCCCCCEEEEEEEEEE
Q 034638 7 ILTPGNGPKPVAGQKVTVHCTGYG 30 (88)
Q Consensus 7 vl~~G~g~~~~~gd~V~i~y~~~~ 30 (88)
+++...|...++||.|++-=.++.
T Consensus 68 vvkDanGn~L~dGDsVtvIKDLKV 91 (138)
T 2akl_A 68 VIKDSVGNVLQDGDTITVIKDLKV 91 (138)
T ss_dssp SCBCTTSCBCCTTCEEECCSCEEC
T ss_pred eEEcCCCCCccCCCeEEEEeeccc
Confidence 345667888999999998655554
No 126
>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.49 E-value=67 Score=15.58 Aligned_cols=15 Identities=27% Similarity=0.306 Sum_probs=9.2
Q ss_pred cCCCCCcEEEEEECC
Q 034638 68 MGMQVGEVARLRTKP 82 (88)
Q Consensus 68 ~~m~~G~~~~~~ip~ 82 (88)
..+++||...+.-..
T Consensus 24 Ls~~~Gd~i~vl~~~ 38 (70)
T 2ct4_A 24 ISMAEGEDLSLMEED 38 (70)
T ss_dssp CCBCTTCEEEEEECC
T ss_pred CCCCCCCEEEEEecc
Confidence 346777777766543
No 127
>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A
Probab=20.49 E-value=64 Score=14.90 Aligned_cols=14 Identities=14% Similarity=0.491 Sum_probs=8.7
Q ss_pred cCCCCCcEEEEEEC
Q 034638 68 MGMQVGEVARLRTK 81 (88)
Q Consensus 68 ~~m~~G~~~~~~ip 81 (88)
..+++|+...+.-.
T Consensus 19 Ls~~~Gd~i~v~~~ 32 (58)
T 2vwf_A 19 LGFRRGDFIHVMDN 32 (58)
T ss_dssp CCBCTTCEEEEEEC
T ss_pred cCCCCCCEEEEEEc
Confidence 44667777666654
No 128
>1ge9_A Ribosome recycling factor; three-helix bundle; NMR {Aquifex aeolicus} SCOP: d.67.3.1
Probab=20.38 E-value=18 Score=22.24 Aligned_cols=66 Identities=12% Similarity=0.127 Sum_probs=38.7
Q ss_pred CCC-CCCCCEEEEEEEEEEeC-CCceeeEeccCCCCCccEEEEeCCCCccccHHHHhcC---C---CCCcEEEEEECC
Q 034638 13 GPK-PVAGQKVTVHCTGYGKN-GDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMG---M---QVGEVARLRTKP 82 (88)
Q Consensus 13 g~~-~~~gd~V~i~y~~~~~~-gg~~~~~~~t~~~~~~p~~~~lG~~~~~~g~~~al~~---m---~~G~~~~~~ip~ 82 (88)
|.+ |..=|.|.|+|-+...- + ++-.=+-. +.+.+.++.-+..+++.++.|+.. + .-|...++.+|+
T Consensus 33 GRa~p~lld~I~V~yyG~~tpL~---qvA~Isv~-~~r~l~I~p~D~~~i~~IekAI~~dLglnP~~dG~~Iri~iP~ 106 (184)
T 1ge9_A 33 SRASTALVEEIKVEYYGSKVPIK---QLGTISVP-EHNQIVIQVWDQNAVPAIEKAIREELNLNPTVQGNVIRVTLPP 106 (184)
T ss_dssp SSCCTTTCSCCCEESSSCEECTT---TTCEEECS-SSSEEEEECSSSSHHHHHHHHHHHHHCSCCEEETTEEEEECCC
T ss_pred CCCCHHHhCCeEEEECCCCccHH---HceeeecC-CCCEEEEEecCHHHHHHHHHHHHhCCCCCcccCCCEEEEeCCC
Confidence 444 66678888888543211 0 11111111 124677777788888888888874 2 225778888876
No 129
>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A
Probab=20.32 E-value=70 Score=14.90 Aligned_cols=21 Identities=24% Similarity=0.760 Sum_probs=12.1
Q ss_pred cCCCCCcEEEEEECCC-CCCCC
Q 034638 68 MGMQVGEVARLRTKPS-SSPWW 88 (88)
Q Consensus 68 ~~m~~G~~~~~~ip~~-~a~~~ 88 (88)
..+++||...+.-..+ ..-||
T Consensus 20 Ls~~~Gd~i~v~~~~~~~~~Ww 41 (60)
T 1oot_A 20 LPFRKGDVITILKKSDSQNDWW 41 (60)
T ss_dssp CCBCTTCEEEEEECCSCTTSEE
T ss_pred eeEcCCCEEEEEEeCCCCCCeE
Confidence 4567777777765532 33454
No 130
>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A
Probab=20.07 E-value=71 Score=15.71 Aligned_cols=21 Identities=24% Similarity=0.718 Sum_probs=11.9
Q ss_pred cCCCCCcEEEEEECC-CCCCCC
Q 034638 68 MGMQVGEVARLRTKP-SSSPWW 88 (88)
Q Consensus 68 ~~m~~G~~~~~~ip~-~~a~~~ 88 (88)
+.+++||...+.-.. ...-||
T Consensus 19 Ls~~~Gd~i~vl~~~~~~~gWw 40 (69)
T 2ydl_A 19 LTIKEGDIVTLINKDCIDVGWW 40 (69)
T ss_dssp CCBCTTCEEEEEESCCSSTTEE
T ss_pred cccCCCCEEEEEEcCCCCCCEE
Confidence 456777777766543 233454
Done!