BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 034642
         (88 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|224106860|ref|XP_002314309.1| regulatory subunit of cyclin-dependent kinase [Populus
          trichocarpa]
 gi|118485577|gb|ABK94640.1| unknown [Populus trichocarpa]
 gi|222850717|gb|EEE88264.1| regulatory subunit of cyclin-dependent kinase [Populus
          trichocarpa]
          Length = 84

 Score =  163 bits (412), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 78/88 (88%), Positives = 83/88 (94%), Gaps = 4/88 (4%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYS+KYFDDT+EYRHVVLPP+VAKLLPKNRLLSE EWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSDKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQNILAK 88
          EPHIMLFRRPLN+QQQQENQ    +LAK
Sbjct: 61 EPHIMLFRRPLNFQQQQENQ----VLAK 84


>gi|117165994|dbj|BAF36296.1| hypothetical protein [Ipomoea trifida]
          Length = 1291

 Score =  160 bits (406), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 81/88 (92%), Positives = 86/88 (97%)

Query: 1    MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
            MGQIQYSEKYFDDT+EYRHVVLPP+VAKLLPKNRLLSE EWRAIGVQQSRGWVHYAIHRP
Sbjct: 1204 MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 1263

Query: 61   EPHIMLFRRPLNYQQQQENQAQQNILAK 88
            EPHIMLFRRPLNYQQQQE+QAQ N++AK
Sbjct: 1264 EPHIMLFRRPLNYQQQQESQAQLNLIAK 1291


>gi|15226297|ref|NP_180364.1| cyclin-dependent kinases regulatory subunit 2 [Arabidopsis
          thaliana]
 gi|297822483|ref|XP_002879124.1| cdk-subunit 2 [Arabidopsis lyrata subsp. lyrata]
 gi|75206284|sp|Q9SJJ5.1|CKS2_ARATH RecName: Full=Cyclin-dependent kinases regulatory subunit 2
 gi|4510419|gb|AAD21505.1| putative cyclin-dependent kinase regulatory subunit [Arabidopsis
          thaliana]
 gi|38566522|gb|AAR24151.1| At2g27970 [Arabidopsis thaliana]
 gi|40823612|gb|AAR92293.1| At2g27970 [Arabidopsis thaliana]
 gi|297324963|gb|EFH55383.1| cdk-subunit 2 [Arabidopsis lyrata subsp. lyrata]
 gi|330252971|gb|AEC08065.1| cyclin-dependent kinases regulatory subunit 2 [Arabidopsis
          thaliana]
          Length = 83

 Score =  156 bits (395), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 74/82 (90%), Positives = 80/82 (97%), Gaps = 2/82 (2%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYS+KYFDDT+EYRHVVLPP+VAKLLPKNR+LSE+EWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSDKYFDDTFEYRHVVLPPEVAKLLPKNRILSESEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQ 82
          EPHIMLFRRPLNY  QQE+QAQ
Sbjct: 61 EPHIMLFRRPLNY--QQEHQAQ 80


>gi|45935118|gb|AAS79576.1| putative CDK regulatory subunit [Ipomoea trifida]
          Length = 88

 Score =  156 bits (395), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 81/88 (92%), Positives = 86/88 (97%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDT+EYRHVVLPP+VAKLLPKNRLLSE EWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQNILAK 88
          EPHIMLFRRPLNYQQQQE+QAQ N++AK
Sbjct: 61 EPHIMLFRRPLNYQQQQESQAQLNLIAK 88


>gi|351725771|ref|NP_001237104.1| cyclin-dependent kinases regulatory subunit [Glycine max]
 gi|356542684|ref|XP_003539796.1| PREDICTED: cyclin-dependent kinases regulatory subunit 2-like
          [Glycine max]
 gi|42362268|gb|AAS13367.1| cyclin-dependent kinases regulatory subunit [Glycine max]
 gi|255628843|gb|ACU14766.1| unknown [Glycine max]
 gi|388501782|gb|AFK38957.1| unknown [Lotus japonicus]
          Length = 88

 Score =  155 bits (392), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 83/88 (94%), Positives = 86/88 (97%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDTYEYRHVVLPP+VAKLLPKNRLLSE EWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQNILAK 88
          EPHIMLFRRPLNYQQQQENQAQQ++L K
Sbjct: 61 EPHIMLFRRPLNYQQQQENQAQQSMLVK 88


>gi|357472055|ref|XP_003606312.1| Cyclin-dependent kinases regulatory subunit [Medicago truncatula]
 gi|355507367|gb|AES88509.1| Cyclin-dependent kinases regulatory subunit [Medicago truncatula]
 gi|388496380|gb|AFK36256.1| unknown [Medicago truncatula]
          Length = 88

 Score =  155 bits (391), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 82/88 (93%), Positives = 85/88 (96%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDTYEYRHVVLPP+VAKLLPKNRLLSE EWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQNILAK 88
          EPHIMLFRRPLNYQQQQ+NQAQQ +L K
Sbjct: 61 EPHIMLFRRPLNYQQQQDNQAQQGMLVK 88


>gi|224118450|ref|XP_002331485.1| regulatory subunit of cyclin-dependent kinase [Populus
          trichocarpa]
 gi|27435806|gb|AAO13226.1|AF149014_1 CKS1 protein [Populus tremula x Populus tremuloides]
 gi|118488360|gb|ABK95998.1| unknown [Populus trichocarpa]
 gi|118489795|gb|ABK96697.1| unknown [Populus trichocarpa x Populus deltoides]
 gi|222873563|gb|EEF10694.1| regulatory subunit of cyclin-dependent kinase [Populus
          trichocarpa]
          Length = 83

 Score =  154 bits (389), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 72/78 (92%), Positives = 75/78 (96%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKY DDT+EYRHVVLPP+VAKLL KNRLLSE EWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYLDDTFEYRHVVLPPEVAKLLIKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQE 78
          EPHIMLFRRPLNYQQQQ+
Sbjct: 61 EPHIMLFRRPLNYQQQQD 78


>gi|225436438|ref|XP_002274037.1| PREDICTED: cyclin-dependent kinases regulatory subunit 2 isoform
          1 [Vitis vinifera]
 gi|147800865|emb|CAN60128.1| hypothetical protein VITISV_018192 [Vitis vinifera]
 gi|297734891|emb|CBI17125.3| unnamed protein product [Vitis vinifera]
          Length = 88

 Score =  153 bits (387), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 83/88 (94%), Positives = 85/88 (96%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDTYEYRHVVLPP+VAKLL KNRLLSE EWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLQKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQNILAK 88
          EPHIMLFRRPLNYQQQQENQAQQ +LAK
Sbjct: 61 EPHIMLFRRPLNYQQQQENQAQQGLLAK 88


>gi|90856236|gb|ABE01245.1| cyclin-dependent kinases regulatory subunit [Camellia sinensis]
          Length = 88

 Score =  153 bits (386), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 81/88 (92%), Positives = 85/88 (96%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDTYEYRHVVLPP+VAKLLPKNRLLSE EWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQNILAK 88
          EPHIMLFRRPLNYQQQQE QAQQ +++K
Sbjct: 61 EPHIMLFRRPLNYQQQQETQAQQIMVSK 88


>gi|388515343|gb|AFK45733.1| unknown [Lotus japonicus]
          Length = 88

 Score =  153 bits (386), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 82/88 (93%), Positives = 85/88 (96%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDTY YRHVVLPP+VAKLLPKNRLLSE EWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTYGYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQNILAK 88
          EPHIMLFRRPLNYQQQQENQAQQ++L K
Sbjct: 61 EPHIMLFRRPLNYQQQQENQAQQSMLVK 88


>gi|336442561|gb|AEI55454.1| cyclin-dependent kinase subunit 1 [Malus x domestica]
 gi|336442563|gb|AEI55455.1| cyclin-dependent kinase subunit 1 [Malus x domestica]
          Length = 88

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 82/88 (93%), Positives = 83/88 (94%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDD YEYRHVVLP DVAKLLPKNRLLSE EWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDIYEYRHVVLPQDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQNILAK 88
          EPHIMLFRRPLNYQQQQENQA Q +LAK
Sbjct: 61 EPHIMLFRRPLNYQQQQENQAAQQVLAK 88


>gi|449528974|ref|XP_004171476.1| PREDICTED: cyclin-dependent kinases regulatory subunit 2-like
          [Cucumis sativus]
          Length = 88

 Score =  152 bits (384), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 83/88 (94%), Positives = 84/88 (95%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDD YEYRHVVL P+VAKLLPKNRLLSE EWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQNILAK 88
          EPHIMLFRRPLNYQQQQENQAQQ ILAK
Sbjct: 61 EPHIMLFRRPLNYQQQQENQAQQQILAK 88


>gi|226506878|ref|NP_001147261.1| cyclin-dependent kinases regulatory subunit [Zea mays]
 gi|194702034|gb|ACF85101.1| unknown [Zea mays]
 gi|195604506|gb|ACG24083.1| cyclin-dependent kinases regulatory subunit [Zea mays]
 gi|195606852|gb|ACG25256.1| cyclin-dependent kinases regulatory subunit [Zea mays]
 gi|195608282|gb|ACG25971.1| cyclin-dependent kinases regulatory subunit [Zea mays]
 gi|195608534|gb|ACG26097.1| cyclin-dependent kinases regulatory subunit [Zea mays]
 gi|195608568|gb|ACG26114.1| cyclin-dependent kinases regulatory subunit [Zea mays]
 gi|195608768|gb|ACG26214.1| cyclin-dependent kinases regulatory subunit [Zea mays]
 gi|195608806|gb|ACG26233.1| cyclin-dependent kinases regulatory subunit [Zea mays]
 gi|195608824|gb|ACG26242.1| cyclin-dependent kinases regulatory subunit [Zea mays]
 gi|195609230|gb|ACG26445.1| cyclin-dependent kinases regulatory subunit [Zea mays]
 gi|195609378|gb|ACG26519.1| cyclin-dependent kinases regulatory subunit [Zea mays]
 gi|195609486|gb|ACG26573.1| cyclin-dependent kinases regulatory subunit [Zea mays]
 gi|195610092|gb|ACG26876.1| cyclin-dependent kinases regulatory subunit [Zea mays]
 gi|195610384|gb|ACG27022.1| cyclin-dependent kinases regulatory subunit [Zea mays]
 gi|195610444|gb|ACG27052.1| cyclin-dependent kinases regulatory subunit [Zea mays]
 gi|195610678|gb|ACG27169.1| cyclin-dependent kinases regulatory subunit [Zea mays]
 gi|195617154|gb|ACG30407.1| cyclin-dependent kinases regulatory subunit [Zea mays]
 gi|195617600|gb|ACG30630.1| cyclin-dependent kinases regulatory subunit [Zea mays]
 gi|195639798|gb|ACG39367.1| cyclin-dependent kinases regulatory subunit [Zea mays]
 gi|413957008|gb|AFW89657.1| hypothetical protein ZEAMMB73_443898 [Zea mays]
          Length = 87

 Score =  152 bits (383), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 70/73 (95%), Positives = 72/73 (98%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDTYEYRHVVLPP+VAKLLPKNRLLSE EWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNY 73
          EPHIMLFRRP+NY
Sbjct: 61 EPHIMLFRRPINY 73


>gi|115450713|ref|NP_001048957.1| Os03g0146300 [Oryza sativa Japonica Group]
 gi|75127295|sp|Q6PS57.1|CKS1_ORYSJ RecName: Full=Cyclin-dependent kinases regulatory subunit 1
 gi|158512867|sp|A2XCH8.1|CKS1_ORYSI RecName: Full=Cyclin-dependent kinases regulatory subunit 1
 gi|15451612|gb|AAK98736.1|AC090485_15 Putative cyclin-dependent kinase regulatory subunit [Oryza sativa
          Japonica Group]
 gi|46487749|gb|AAS99236.1| cyclin-dependent kinase subunit [Oryza sativa Japonica Group]
 gi|108706167|gb|ABF93962.1| cyclin-dependent kinases regulatory subunit, putative, expressed
          [Oryza sativa Japonica Group]
 gi|113547428|dbj|BAF10871.1| Os03g0146300 [Oryza sativa Japonica Group]
 gi|125542399|gb|EAY88538.1| hypothetical protein OsI_10011 [Oryza sativa Indica Group]
 gi|125584911|gb|EAZ25575.1| hypothetical protein OsJ_09400 [Oryza sativa Japonica Group]
 gi|215768237|dbj|BAH00466.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 90

 Score =  151 bits (382), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 70/73 (95%), Positives = 72/73 (98%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDTYEYRHVVLPP+VAKLLPKNRLLSE EWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNY 73
          EPHIMLFRRPLN+
Sbjct: 61 EPHIMLFRRPLNF 73


>gi|242042231|ref|XP_002468510.1| hypothetical protein SORBIDRAFT_01g047130 [Sorghum bicolor]
 gi|241922364|gb|EER95508.1| hypothetical protein SORBIDRAFT_01g047130 [Sorghum bicolor]
          Length = 87

 Score =  150 bits (380), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 69/73 (94%), Positives = 72/73 (98%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDTYEYRHVVLPP+VAKLLPKNRLLSE EWRAIGVQQSRGW+HYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWMHYAIHRP 60

Query: 61 EPHIMLFRRPLNY 73
          EPHIMLFRRP+NY
Sbjct: 61 EPHIMLFRRPINY 73


>gi|255565493|ref|XP_002523737.1| Cyclin-dependent kinases regulatory subunit, putative [Ricinus
          communis]
 gi|223537041|gb|EEF38677.1| Cyclin-dependent kinases regulatory subunit, putative [Ricinus
          communis]
          Length = 88

 Score =  150 bits (379), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/88 (96%), Positives = 87/88 (98%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKY+DDTYEYRHVVLPP+VAKLLPKNRLLSE EWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYYDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQNILAK 88
          EPHIMLFRRPLNYQQQQENQAQQNILAK
Sbjct: 61 EPHIMLFRRPLNYQQQQENQAQQNILAK 88


>gi|168013260|ref|XP_001759319.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689632|gb|EDQ76003.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 91

 Score =  149 bits (377), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 69/73 (94%), Positives = 70/73 (95%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          M QIQYSEKYFDDTYEYRHVVLPPD+AKLLPKNRLLSE EWR IGVQQSRGWVHYAIHRP
Sbjct: 1  MPQIQYSEKYFDDTYEYRHVVLPPDIAKLLPKNRLLSEAEWRGIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNY 73
          EPHIMLFRRPLNY
Sbjct: 61 EPHIMLFRRPLNY 73


>gi|168000685|ref|XP_001753046.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162695745|gb|EDQ82087.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 93

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 69/73 (94%), Positives = 70/73 (95%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          M QIQYSEKYFDDTYEYRHVVLPPD+AKLLPKNRLLSE EWR IGVQQSRGWVHYAIHRP
Sbjct: 1  MPQIQYSEKYFDDTYEYRHVVLPPDIAKLLPKNRLLSEAEWRGIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNY 73
          EPHIMLFRRPLNY
Sbjct: 61 EPHIMLFRRPLNY 73


>gi|40641585|emb|CAE54272.1| putative cyclin-dependent kinase regulatory subunit [Triticum
          aestivum]
          Length = 90

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 67/73 (91%), Positives = 72/73 (98%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDT+EYRHVVLPP+VAKLLPKNRLL+E EWRA+GVQQSRGWVHYA+HRP
Sbjct: 1  MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLAENEWRALGVQQSRGWVHYAVHRP 60

Query: 61 EPHIMLFRRPLNY 73
          EPHIMLFRRPLNY
Sbjct: 61 EPHIMLFRRPLNY 73


>gi|326518917|dbj|BAJ92619.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 90

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 67/73 (91%), Positives = 72/73 (98%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDT+EYRHVVLPP+VAKLLPKNRLL+E EWRA+GVQQSRGWVHYA+HRP
Sbjct: 1  MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLAENEWRALGVQQSRGWVHYAVHRP 60

Query: 61 EPHIMLFRRPLNY 73
          EPHIMLFRRPLNY
Sbjct: 61 EPHIMLFRRPLNY 73


>gi|357120755|ref|XP_003562090.1| PREDICTED: uncharacterized protein LOC100840494 [Brachypodium
           distachyon]
          Length = 184

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 67/73 (91%), Positives = 72/73 (98%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
           MGQIQYSEKYFDDT+EYRHVVLPP+VAKLLPKNRLL+E EWRA+GVQQSRGWVHYA+HRP
Sbjct: 95  MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLAENEWRALGVQQSRGWVHYAVHRP 154

Query: 61  EPHIMLFRRPLNY 73
           EPHIMLFRRPLNY
Sbjct: 155 EPHIMLFRRPLNY 167


>gi|297822485|ref|XP_002879125.1| cdk-subunit 1 [Arabidopsis lyrata subsp. lyrata]
 gi|297324964|gb|EFH55384.1| cdk-subunit 1 [Arabidopsis lyrata subsp. lyrata]
          Length = 87

 Score =  147 bits (371), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 68/71 (95%), Positives = 70/71 (98%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDT+EYRHVVLPP+VAKLLPKNRLLSE EWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPL 71
          EPHIMLFRRPL
Sbjct: 61 EPHIMLFRRPL 71


>gi|15226294|ref|NP_180363.1| cyclin-dependent kinases regulatory subunit 1 [Arabidopsis
          thaliana]
 gi|75097781|sp|O23249.1|CKS1_ARATH RecName: Full=Cyclin-dependent kinases regulatory subunit 1;
          AltName: Full=CKS1-At
 gi|2274859|emb|CAA03859.1| Cks1 protein [Arabidopsis thaliana]
 gi|4510420|gb|AAD21506.1| putative cyclin-dependent kinase regulatory subunit [Arabidopsis
          thaliana]
 gi|21593913|gb|AAM65878.1| putative cyclin-dependent kinase regulatory subunit [Arabidopsis
          thaliana]
 gi|51969580|dbj|BAD43482.1| putative cyclin-dependent kinase regulatory subunit [Arabidopsis
          thaliana]
 gi|51969798|dbj|BAD43591.1| putative cyclin-dependent kinase regulatory subunit [Arabidopsis
          thaliana]
 gi|51970380|dbj|BAD43882.1| putative cyclin-dependent kinase regulatory subunit [Arabidopsis
          thaliana]
 gi|88010880|gb|ABD38867.1| At2g27960 [Arabidopsis thaliana]
 gi|330252970|gb|AEC08064.1| cyclin-dependent kinases regulatory subunit 1 [Arabidopsis
          thaliana]
          Length = 87

 Score =  147 bits (370), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 67/71 (94%), Positives = 70/71 (98%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDT+EYRHVVLPP+VAKLLPKNRLLSE EWRAIGVQQSRGWVHYA+HRP
Sbjct: 1  MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAVHRP 60

Query: 61 EPHIMLFRRPL 71
          EPHIMLFRRPL
Sbjct: 61 EPHIMLFRRPL 71


>gi|449015415|dbj|BAM78817.1| cyclin-dependent kinase regulatory subunit [Cyanidioschyzon
          merolae strain 10D]
          Length = 99

 Score =  145 bits (366), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 63/73 (86%), Positives = 71/73 (97%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QIQYSEKY+DDTYEYRHV+LPPD+A+LLPKN+LLSE EWR++GVQQSRGWVHYAIHRPEP
Sbjct: 5  QIQYSEKYYDDTYEYRHVILPPDIARLLPKNKLLSEAEWRSLGVQQSRGWVHYAIHRPEP 64

Query: 63 HIMLFRRPLNYQQ 75
          HI+LFRRPLNY Q
Sbjct: 65 HILLFRRPLNYSQ 77


>gi|412986742|emb|CCO15168.1| cyclin-dependent kinases regulatory subunit [Bathycoccus
          prasinos]
          Length = 83

 Score =  144 bits (362), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 66/83 (79%), Positives = 72/83 (86%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          M QIQYSEKY+DD YEYRHVVLPPD+AK LPKNRLL+ETEWR +GVQQSRGWVHYAIHRP
Sbjct: 1  MPQIQYSEKYYDDVYEYRHVVLPPDIAKCLPKNRLLNETEWRGLGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQ 83
          EPHIML+RRPLNY Q     A +
Sbjct: 61 EPHIMLYRRPLNYGQAPLGDANK 83


>gi|116782896|gb|ABK22711.1| unknown [Picea sitchensis]
 gi|224286907|gb|ACN41156.1| unknown [Picea sitchensis]
          Length = 92

 Score =  143 bits (361), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 67/73 (91%), Positives = 69/73 (94%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          M QIQYSEKY DDTYEYRHVVLPP+ AKLLPKNRLL+E EWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MPQIQYSEKYTDDTYEYRHVVLPPETAKLLPKNRLLNENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNY 73
          EPHIMLFRRPLNY
Sbjct: 61 EPHIMLFRRPLNY 73


>gi|303277147|ref|XP_003057867.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226460524|gb|EEH57818.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 88

 Score =  143 bits (360), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/75 (86%), Positives = 70/75 (93%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          M QIQYSEKY+DD YEYRHVVLPPD+AKLLPK RLLSE+EWR +GVQQSRGWVHYAIHRP
Sbjct: 1  MPQIQYSEKYYDDIYEYRHVVLPPDIAKLLPKGRLLSESEWRGLGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQ 75
          EPHIML+RRPLNY Q
Sbjct: 61 EPHIMLYRRPLNYGQ 75


>gi|414864799|tpg|DAA43356.1| TPA: cyclin-dependent kinase regulatory subunitDrought responsive
           protein CKS2 [Zea mays]
          Length = 156

 Score =  142 bits (358), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 71/88 (80%), Positives = 79/88 (89%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
           M QIQYSEKY+DDTYEYRHVVLPP+VAKLLP+N LLSE +WR +GVQQSRGWVHYAIHRP
Sbjct: 69  MEQIQYSEKYYDDTYEYRHVVLPPEVAKLLPRNILLSEKQWRLVGVQQSRGWVHYAIHRP 128

Query: 61  EPHIMLFRRPLNYQQQQENQAQQNILAK 88
           EPHIMLFRRP+NYQQQQE  A  ++L K
Sbjct: 129 EPHIMLFRRPINYQQQQEEAAAAHVLPK 156


>gi|116780308|gb|ABK21627.1| unknown [Picea sitchensis]
          Length = 93

 Score =  142 bits (357), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 66/73 (90%), Positives = 69/73 (94%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          M QIQYSEKY+DDTYEYRHVVLPPDVA+LLPKNRLL+E EWR IGVQQSRGWVHYAIHRP
Sbjct: 1  MPQIQYSEKYYDDTYEYRHVVLPPDVARLLPKNRLLTENEWRGIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNY 73
          EPHIMLFRR LNY
Sbjct: 61 EPHIMLFRRHLNY 73


>gi|226500170|ref|NP_001148447.1| LOC100282062 [Zea mays]
 gi|195619324|gb|ACG31492.1| cyclin-dependent kinases regulatory subunit [Zea mays]
          Length = 88

 Score =  142 bits (357), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 72/88 (81%), Positives = 79/88 (89%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          M QIQYSEKYFDDTYEYRHVVLPP+VAKLLP+N LLSE +WR +GVQQSRGWVHYAIHRP
Sbjct: 1  MEQIQYSEKYFDDTYEYRHVVLPPEVAKLLPRNILLSEKQWRLVGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQNILAK 88
          EPHIMLFRRP+NYQQQQE  A  ++L K
Sbjct: 61 EPHIMLFRRPINYQQQQEEAAAAHVLPK 88


>gi|452823751|gb|EME30759.1| cyclin-dependent kinase regulatory subunit CKS1 [Galdieria
          sulphuraria]
          Length = 101

 Score =  142 bits (357), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 66/86 (76%), Positives = 75/86 (87%), Gaps = 3/86 (3%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QIQYSEKY+DDTYEYRHV+LPPD+AKLLPKNRLLSE EWR +GVQQSRGWVHYAIHRPEP
Sbjct: 5  QIQYSEKYYDDTYEYRHVILPPDIAKLLPKNRLLSEAEWRGLGVQQSRGWVHYAIHRPEP 64

Query: 63 HIMLFRRPLNYQQQQENQAQQNILAK 88
          +I+LFRRP   +Q    Q Q NI++K
Sbjct: 65 NILLFRRP---KQTDTQQTQNNIVSK 87


>gi|302772629|ref|XP_002969732.1| hypothetical protein SELMODRAFT_92278 [Selaginella
          moellendorffii]
 gi|300162243|gb|EFJ28856.1| hypothetical protein SELMODRAFT_92278 [Selaginella
          moellendorffii]
          Length = 92

 Score =  142 bits (357), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 65/73 (89%), Positives = 67/73 (91%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          M  IQYSEKYFDD YEYRHVVLPPDVAK LPKN+LL+E EWR IGVQQSRGWVHYAIHRP
Sbjct: 1  MPSIQYSEKYFDDVYEYRHVVLPPDVAKALPKNKLLTENEWRTIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNY 73
          EPHIMLFRRPLNY
Sbjct: 61 EPHIMLFRRPLNY 73


>gi|302799158|ref|XP_002981338.1| hypothetical protein SELMODRAFT_233729 [Selaginella
          moellendorffii]
 gi|300150878|gb|EFJ17526.1| hypothetical protein SELMODRAFT_233729 [Selaginella
          moellendorffii]
          Length = 94

 Score =  142 bits (357), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 65/73 (89%), Positives = 67/73 (91%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          M  IQYSEKYFDD YEYRHVVLPPDVAK LPKN+LL+E EWR IGVQQSRGWVHYAIHRP
Sbjct: 1  MPSIQYSEKYFDDVYEYRHVVLPPDVAKALPKNKLLTENEWRTIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNY 73
          EPHIMLFRRPLNY
Sbjct: 61 EPHIMLFRRPLNY 73


>gi|195607740|gb|ACG25700.1| cyclin-dependent kinases regulatory subunit [Zea mays]
 gi|414864798|tpg|DAA43355.1| TPA: cyclin-dependent kinase regulatory subunitDrought responsive
           protein CKS2 [Zea mays]
          Length = 104

 Score =  141 bits (355), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 71/88 (80%), Positives = 79/88 (89%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
           M QIQYSEKY+DDTYEYRHVVLPP+VAKLLP+N LLSE +WR +GVQQSRGWVHYAIHRP
Sbjct: 17  MEQIQYSEKYYDDTYEYRHVVLPPEVAKLLPRNILLSEKQWRLVGVQQSRGWVHYAIHRP 76

Query: 61  EPHIMLFRRPLNYQQQQENQAQQNILAK 88
           EPHIMLFRRP+NYQQQQE  A  ++L K
Sbjct: 77  EPHIMLFRRPINYQQQQEEAAAAHVLPK 104


>gi|195608822|gb|ACG26241.1| cyclin-dependent kinases regulatory subunit [Zea mays]
 gi|238012780|gb|ACR37425.1| unknown [Zea mays]
 gi|290759654|gb|ADD54454.1| drought responsive protein CKS2 [Zea mays]
          Length = 88

 Score =  140 bits (353), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 71/88 (80%), Positives = 79/88 (89%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          M QIQYSEKY+DDTYEYRHVVLPP+VAKLLP+N LLSE +WR +GVQQSRGWVHYAIHRP
Sbjct: 1  MEQIQYSEKYYDDTYEYRHVVLPPEVAKLLPRNILLSEKQWRLVGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQNILAK 88
          EPHIMLFRRP+NYQQQQE  A  ++L K
Sbjct: 61 EPHIMLFRRPINYQQQQEEAAAAHVLPK 88


>gi|55978016|gb|AAV68608.1| cyclin-dependent kinases regulatory subunit [Ostreococcus tauri]
          Length = 77

 Score =  140 bits (352), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 63/72 (87%), Positives = 68/72 (94%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          M QIQYSEKY+DD YEYRHVVLPPD+AKLLPKNRLL+ETEWR +GVQQSRGWVHYAIHRP
Sbjct: 1  MPQIQYSEKYYDDVYEYRHVVLPPDIAKLLPKNRLLTETEWRGLGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLN 72
          EPHIML+RRPL 
Sbjct: 61 EPHIMLYRRPLT 72


>gi|365927256|gb|AEX07592.1| cdk-subunit 1, partial [Brassica juncea]
          Length = 76

 Score =  139 bits (350), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 65/76 (85%), Positives = 68/76 (89%)

Query: 13 DTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLN 72
          DT+EYRHVVLPPD AKLLPKNRLLSE EWRAIGVQQSRGWVHYAIHRPEPHIMLFRR LN
Sbjct: 1  DTFEYRHVVLPPDTAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRTLN 60

Query: 73 YQQQQENQAQQNILAK 88
          YQQQQ+     N+LAK
Sbjct: 61 YQQQQQENHAHNVLAK 76


>gi|356542696|ref|XP_003539802.1| PREDICTED: cyclin-dependent kinases regulatory subunit 2-like
          [Glycine max]
          Length = 85

 Score =  139 bits (350), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 64/72 (88%), Positives = 68/72 (94%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          MG+I YS+KY+DDTYEYRHVVLPP+VAKLLPKNRLLSE E RAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGEISYSDKYYDDTYEYRHVVLPPEVAKLLPKNRLLSENECRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLN 72
          EP IMLFRRPLN
Sbjct: 61 EPQIMLFRRPLN 72


>gi|116790088|gb|ABK25497.1| unknown [Picea sitchensis]
          Length = 93

 Score =  139 bits (349), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 63/73 (86%), Positives = 68/73 (93%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          M QI+YSEKY+DD YEYRHV LPPDVA+LLPK+RLL+E EWR IGVQQSRGWVHYAIHRP
Sbjct: 1  MPQIEYSEKYYDDAYEYRHVELPPDVARLLPKDRLLTENEWRGIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNY 73
          EPHIMLFRRPLNY
Sbjct: 61 EPHIMLFRRPLNY 73


>gi|145348966|ref|XP_001418912.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579142|gb|ABO97205.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 75

 Score =  138 bits (348), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 62/70 (88%), Positives = 67/70 (95%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          M QIQYSEKY+DD YEYRHVVLPPD+AKLLPKNRLL+ETEWR +GVQQSRGWVHYAIHRP
Sbjct: 1  MPQIQYSEKYYDDVYEYRHVVLPPDIAKLLPKNRLLTETEWRGLGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRP 70
          EPHIML+RRP
Sbjct: 61 EPHIMLYRRP 70


>gi|195656273|gb|ACG47604.1| cyclin-dependent kinases regulatory subunit [Zea mays]
          Length = 88

 Score =  138 bits (347), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 71/88 (80%), Positives = 78/88 (88%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          M QIQYSEKYFDDTYEYRHVVLPP+VAKLLP+N LLSE + R +GVQQSRGWVHYAIHRP
Sbjct: 1  MXQIQYSEKYFDDTYEYRHVVLPPEVAKLLPRNILLSEKQXRLVGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQNILAK 88
          EPHIMLFRRP+NYQQQQE  A  ++L K
Sbjct: 61 EPHIMLFRRPINYQQQQEEAAAAHVLPK 88


>gi|294463700|gb|ADE77376.1| unknown [Picea sitchensis]
          Length = 106

 Score =  138 bits (347), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 62/79 (78%), Positives = 70/79 (88%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          M Q++YSEKY+DDTYEYRHV LPPDVA+ LPKNRLL+E EWR IGVQQSRGWVHYAIH  
Sbjct: 1  MSQMEYSEKYYDDTYEYRHVELPPDVAQFLPKNRLLTENEWRGIGVQQSRGWVHYAIHCS 60

Query: 61 EPHIMLFRRPLNYQQQQEN 79
          EPHIMLFRRPLNY+Q  ++
Sbjct: 61 EPHIMLFRRPLNYEQNHQH 79


>gi|159490880|ref|XP_001703401.1| cyclin dependent kinase regulatory subunit [Chlamydomonas
          reinhardtii]
 gi|158280325|gb|EDP06083.1| cyclin dependent kinase regulatory subunit [Chlamydomonas
          reinhardtii]
          Length = 88

 Score =  134 bits (336), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 60/70 (85%), Positives = 65/70 (92%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          IQYSEKY+DD YEYRHVVLPP++A+LLPK RLLSE EWRA+GVQQSRGWVHYAIHRPEPH
Sbjct: 6  IQYSEKYYDDVYEYRHVVLPPEIAQLLPKGRLLSENEWRALGVQQSRGWVHYAIHRPEPH 65

Query: 64 IMLFRRPLNY 73
          IMLFRRP  Y
Sbjct: 66 IMLFRRPKGY 75


>gi|255072773|ref|XP_002500061.1| predicted protein [Micromonas sp. RCC299]
 gi|226515323|gb|ACO61319.1| predicted protein [Micromonas sp. RCC299]
          Length = 178

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 59/68 (86%), Positives = 63/68 (92%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          M QIQYSEKY+DD YEYRHVVLPPD+AKLLPK RLLSE EWR +GVQQSRGWVHYAIHRP
Sbjct: 1  MPQIQYSEKYYDDVYEYRHVVLPPDIAKLLPKGRLLSEAEWRGLGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFR 68
          EPHIML+R
Sbjct: 61 EPHIMLYR 68


>gi|384250143|gb|EIE23623.1| CKS-domain-containing protein [Coccomyxa subellipsoidea C-169]
          Length = 99

 Score =  131 bits (329), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 61/72 (84%), Positives = 65/72 (90%)

Query: 2  GQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPE 61
           QIQYSEKY+D+ YEYRHVVLP D+AKLLPK  LLSE EWR IGVQQSRGWVHYAIHRPE
Sbjct: 4  NQIQYSEKYYDEIYEYRHVVLPQDLAKLLPKGVLLSENEWRQIGVQQSRGWVHYAIHRPE 63

Query: 62 PHIMLFRRPLNY 73
          PHIMLFRRP+NY
Sbjct: 64 PHIMLFRRPVNY 75


>gi|302830288|ref|XP_002946710.1| hypothetical protein VOLCADRAFT_127315 [Volvox carteri f.
          nagariensis]
 gi|300267754|gb|EFJ51936.1| hypothetical protein VOLCADRAFT_127315 [Volvox carteri f.
          nagariensis]
          Length = 88

 Score =  131 bits (329), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 60/72 (83%), Positives = 65/72 (90%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          IQYSEKY+DD YEYRHVVLP ++A+LLPK RLLSE EWRA+GVQQSRGWVHYAIHRPEPH
Sbjct: 6  IQYSEKYYDDIYEYRHVVLPQEIAQLLPKGRLLSENEWRALGVQQSRGWVHYAIHRPEPH 65

Query: 64 IMLFRRPLNYQQ 75
          IMLFRRP  Y Q
Sbjct: 66 IMLFRRPKGYGQ 77


>gi|307110527|gb|EFN58763.1| hypothetical protein CHLNCDRAFT_140500 [Chlorella variabilis]
          Length = 87

 Score =  125 bits (315), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 57/78 (73%), Positives = 65/78 (83%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          +  IQYSE+Y+DD YEYRHVVLP D+AK LPK++LLSE EWR +GVQQSRGWVHYA HRP
Sbjct: 3  LNGIQYSERYYDDVYEYRHVVLPQDIAKRLPKDKLLSEAEWRQLGVQQSRGWVHYAKHRP 62

Query: 61 EPHIMLFRRPLNYQQQQE 78
          EPHIMLFRRP  Y   Q+
Sbjct: 63 EPHIMLFRRPKGYGTAQQ 80


>gi|428171715|gb|EKX40630.1| cyclin-dependent kinases regulatory subunit [Guillardia theta
           CCMP2712]
          Length = 114

 Score =  125 bits (314), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 53/72 (73%), Positives = 64/72 (88%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
           +  IQYSEKY D TYEYRHV+LP + A++ PKN+LL+ETEWR++GVQQSRGWVHYAIH+P
Sbjct: 30  LATIQYSEKYTDSTYEYRHVILPQETARMCPKNKLLTETEWRSLGVQQSRGWVHYAIHKP 89

Query: 61  EPHIMLFRRPLN 72
           EPHI+LFRRPL 
Sbjct: 90  EPHILLFRRPLG 101


>gi|302755380|ref|XP_002961114.1| hypothetical protein SELMODRAFT_9272 [Selaginella moellendorffii]
 gi|302766954|ref|XP_002966897.1| hypothetical protein SELMODRAFT_9267 [Selaginella moellendorffii]
 gi|300164888|gb|EFJ31496.1| hypothetical protein SELMODRAFT_9267 [Selaginella moellendorffii]
 gi|300172053|gb|EFJ38653.1| hypothetical protein SELMODRAFT_9272 [Selaginella moellendorffii]
          Length = 69

 Score =  125 bits (313), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 56/69 (81%), Positives = 64/69 (92%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          +I YSE+Y DD YEYRHVVLPPD+AK LPKN+LL+E +WRA+GVQQSRGWVHYAIHRPEP
Sbjct: 1  EIYYSERYNDDVYEYRHVVLPPDIAKNLPKNKLLTEEQWRALGVQQSRGWVHYAIHRPEP 60

Query: 63 HIMLFRRPL 71
          HIMLF+RPL
Sbjct: 61 HIMLFKRPL 69


>gi|2493727|sp|P55933.1|CKS1_PHYPO RecName: Full=Probable cyclin-dependent kinases regulatory
          subunit
          Length = 84

 Score =  123 bits (309), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 54/66 (81%), Positives = 62/66 (93%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          IQYSEKY+DD +EYRHV+LPPDVAK +PKNRLLSE EWR +GVQQS+GWVHYA+HRPEPH
Sbjct: 6  IQYSEKYYDDKFEYRHVILPPDVAKEIPKNRLLSEGEWRGLGVQQSQGWVHYALHRPEPH 65

Query: 64 IMLFRR 69
          I+LFRR
Sbjct: 66 ILLFRR 71


>gi|365927254|gb|AEX07591.1| cdk-subunit 2, partial [Brassica juncea]
          Length = 69

 Score =  123 bits (309), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 56/62 (90%), Positives = 61/62 (98%)

Query: 13 DTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLN 72
          DT+EYRHVVLPP+VAKLLPKNR+L+E+EWRAIGVQQSRGWVHYAIHRPEPHIMLFRR LN
Sbjct: 1  DTFEYRHVVLPPEVAKLLPKNRILAESEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRTLN 60

Query: 73 YQ 74
          YQ
Sbjct: 61 YQ 62


>gi|170029846|ref|XP_001842802.1| cyclin-dependent kinaseregulatory subunit [Culex
          quinquefasciatus]
 gi|170059096|ref|XP_001865212.1| cyclin-dependent kinaseregulatory subunit [Culex
          quinquefasciatus]
 gi|167864784|gb|EDS28167.1| cyclin-dependent kinaseregulatory subunit [Culex
          quinquefasciatus]
 gi|167877907|gb|EDS41290.1| cyclin-dependent kinaseregulatory subunit [Culex
          quinquefasciatus]
          Length = 75

 Score =  122 bits (306), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 52/72 (72%), Positives = 63/72 (87%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          +  I YS+KYFDD YEYRHVVLP D+AKL+PK  L++ETEWR+IGVQQSRGW+HY IH+P
Sbjct: 3  VKDIYYSDKYFDDEYEYRHVVLPKDIAKLVPKTHLMTETEWRSIGVQQSRGWIHYMIHQP 62

Query: 61 EPHIMLFRRPLN 72
          EPHI+LFRRP+ 
Sbjct: 63 EPHILLFRRPIT 74


>gi|428174459|gb|EKX43355.1| cyclin-dependent kinases regulatory subunit [Guillardia theta
          CCMP2712]
          Length = 98

 Score =  122 bits (305), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 53/69 (76%), Positives = 62/69 (89%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          IQYSEKY DD YEYRHV+LP +VA++ PKN+LLSETEWR +GVQQSRGW HYAIH+PEPH
Sbjct: 5  IQYSEKYNDDMYEYRHVILPSEVARMCPKNKLLSETEWRNLGVQQSRGWEHYAIHKPEPH 64

Query: 64 IMLFRRPLN 72
          I+LFRRP+ 
Sbjct: 65 ILLFRRPIG 73


>gi|298715128|emb|CBJ27816.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 112

 Score =  120 bits (302), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 51/71 (71%), Positives = 64/71 (90%)

Query: 2  GQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPE 61
           +I+YSEKY DD++EYRHV+LP D+AK LPK+R+L+E EWR +GVQQSRGW+HYAIHRPE
Sbjct: 3  ARIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPE 62

Query: 62 PHIMLFRRPLN 72
          PHI+LF+RPL 
Sbjct: 63 PHILLFKRPLG 73


>gi|118777340|ref|XP_307855.3| AGAP009442-PA [Anopheles gambiae str. PEST]
 gi|116132904|gb|EAA03636.4| AGAP009442-PA [Anopheles gambiae str. PEST]
          Length = 76

 Score =  120 bits (300), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 51/72 (70%), Positives = 62/72 (86%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          +  I YS+KY+DD YEYRHVVLP D+AKL+PK  L++E EWRAIGVQQSRGWVHY +H+P
Sbjct: 3  VKDIYYSDKYYDDEYEYRHVVLPKDIAKLVPKTHLMTENEWRAIGVQQSRGWVHYMVHQP 62

Query: 61 EPHIMLFRRPLN 72
          EPHI+LFRRP+ 
Sbjct: 63 EPHILLFRRPIT 74


>gi|241738745|ref|XP_002412359.1| cyclin-dependent kinase regulatory subunit, putative [Ixodes
          scapularis]
 gi|215505644|gb|EEC15138.1| cyclin-dependent kinase regulatory subunit, putative [Ixodes
          scapularis]
          Length = 92

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/87 (63%), Positives = 68/87 (78%), Gaps = 2/87 (2%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I YS+KY+DD YEYRHVVLP ++AKL+PK+RL+SETEWR IGVQQS GWVHY IH PEPH
Sbjct: 6  IYYSDKYYDDKYEYRHVVLPKEIAKLVPKSRLMSETEWRGIGVQQSHGWVHYMIHEPEPH 65

Query: 64 IMLFRRPLNYQQ--QQENQAQQNILAK 88
          I+LFRR +   +   QE Q Q  + ++
Sbjct: 66 ILLFRRAVTPTELPSQEEQMQAELCSQ 92


>gi|289741887|gb|ADD19691.1| cyclin-dependent protein kinase CDC28 regulatory subunit CKS1
          [Glossina morsitans morsitans]
          Length = 108

 Score =  119 bits (298), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 50/68 (73%), Positives = 60/68 (88%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QIQYSEKYFD  YEYRHV+LPPD+ KL+PK+ L++ETEWR +GVQQS GWVHY +H PEP
Sbjct: 5  QIQYSEKYFDAVYEYRHVILPPDLTKLVPKSHLMTETEWRNLGVQQSPGWVHYMMHAPEP 64

Query: 63 HIMLFRRP 70
          H++LFRRP
Sbjct: 65 HVILFRRP 72


>gi|346471595|gb|AEO35642.1| hypothetical protein [Amblyomma maculatum]
          Length = 89

 Score =  118 bits (295), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 51/68 (75%), Positives = 60/68 (88%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I YS+KY+DD +EYRHVVLP ++AKL+PK  L+SETEWR IGVQQS+GWVHY IH PEPH
Sbjct: 6  IYYSDKYYDDKFEYRHVVLPKEIAKLVPKTHLMSETEWRGIGVQQSQGWVHYMIHEPEPH 65

Query: 64 IMLFRRPL 71
          I+LFRRPL
Sbjct: 66 ILLFRRPL 73


>gi|405965052|gb|EKC30480.1| Cyclin-dependent kinases regulatory subunit 1 [Crassostrea gigas]
          Length = 88

 Score =  117 bits (294), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 61/69 (88%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YSEKY+D+ +EYRHV+LP D+AKL+PKN L++ETEWR +GVQQS GW+HY +H PEP
Sbjct: 5  QISYSEKYYDEKFEYRHVILPNDIAKLVPKNHLMTETEWRNLGVQQSPGWIHYMVHTPEP 64

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 65 HILLFRRPL 73


>gi|157106355|ref|XP_001649286.1| cyclin-dependent kinases regulatory subunit. putative [Aedes
          aegypti]
 gi|108879887|gb|EAT44112.1| AAEL004492-PA [Aedes aegypti]
          Length = 76

 Score =  117 bits (294), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 50/70 (71%), Positives = 61/70 (87%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          +  I YS+KY+DD YEYRHVVLP D+AKL+PK  L++E EWR+IGVQQSRGW+HY IH+P
Sbjct: 3  VKDIYYSDKYYDDEYEYRHVVLPKDIAKLVPKTHLMTENEWRSIGVQQSRGWIHYMIHQP 62

Query: 61 EPHIMLFRRP 70
          EPHI+LFRRP
Sbjct: 63 EPHILLFRRP 72


>gi|224009970|ref|XP_002293943.1| cyclin-dependent kinase [Thalassiosira pseudonana CCMP1335]
 gi|220970615|gb|EED88952.1| cyclin-dependent kinase [Thalassiosira pseudonana CCMP1335]
          Length = 78

 Score =  117 bits (294), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 53/75 (70%), Positives = 62/75 (82%)

Query: 2  GQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPE 61
           +I+YSEKY D+  EYRHV+LP ++AK LPK RLL+E EWR+IGVQQSRGW HYAIHRPE
Sbjct: 4  SRIEYSEKYADEENEYRHVILPKELAKTLPKTRLLTENEWRSIGVQQSRGWEHYAIHRPE 63

Query: 62 PHIMLFRRPLNYQQQ 76
          PHI+LFRRPL    Q
Sbjct: 64 PHILLFRRPLGTDPQ 78


>gi|195110625|ref|XP_001999880.1| GI22832 [Drosophila mojavensis]
 gi|193916474|gb|EDW15341.1| GI22832 [Drosophila mojavensis]
          Length = 93

 Score =  117 bits (293), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 50/67 (74%), Positives = 60/67 (89%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QIQYSEKYFDD YEYRHV+LPPD+AK +PK+ L++ETEWR +GVQQS GWVHY +H PEP
Sbjct: 5  QIQYSEKYFDDKYEYRHVILPPDLAKHVPKSHLMTETEWRNLGVQQSPGWVHYMMHAPEP 64

Query: 63 HIMLFRR 69
          H++LFRR
Sbjct: 65 HVILFRR 71


>gi|442748387|gb|JAA66353.1| Putative cyclin-dependent kinase regulatory subunit [Ixodes
          ricinus]
          Length = 92

 Score =  117 bits (292), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 53/87 (60%), Positives = 68/87 (78%), Gaps = 2/87 (2%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I YS+KY+DD +EYRHVVLP ++AKL+PK+RL+SETEWR IGVQQS GWVHY IH PEPH
Sbjct: 6  IYYSDKYYDDKFEYRHVVLPKEIAKLVPKSRLMSETEWRGIGVQQSHGWVHYMIHEPEPH 65

Query: 64 IMLFRRPLNYQQ--QQENQAQQNILAK 88
          I+LFRR +   +   QE Q +  + ++
Sbjct: 66 ILLFRRAVTPAELPSQEEQMKAELCSQ 92


>gi|195036780|ref|XP_001989846.1| GH19019 [Drosophila grimshawi]
 gi|193894042|gb|EDV92908.1| GH19019 [Drosophila grimshawi]
          Length = 99

 Score =  116 bits (291), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 60/67 (89%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QIQYSEKYFDD +EYRHV+LPPD+AK +PK+ L++ETEWR +GVQQS GWVHY +H PEP
Sbjct: 5  QIQYSEKYFDDKFEYRHVILPPDLAKHVPKSHLMTETEWRNLGVQQSPGWVHYMMHAPEP 64

Query: 63 HIMLFRR 69
          H++LFRR
Sbjct: 65 HVILFRR 71


>gi|330038604|ref|XP_003239645.1| cyclin-dependent kinase regulatory subunit [Cryptomonas
          paramecium]
 gi|327206569|gb|AEA38747.1| cyclin-dependent kinase regulatory subunit [Cryptomonas
          paramecium]
          Length = 73

 Score =  116 bits (291), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 48/67 (71%), Positives = 61/67 (91%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI+YSEKYFD  +EYRHV+LP D+AKL+P+NRLLSE EWR +G++QS+GW+HY IH+PEP
Sbjct: 5  QIKYSEKYFDSYFEYRHVILPVDIAKLVPRNRLLSEPEWRNLGIEQSKGWIHYCIHKPEP 64

Query: 63 HIMLFRR 69
          HI+LFRR
Sbjct: 65 HILLFRR 71


>gi|160331357|ref|XP_001712386.1| kin(cdc) [Hemiselmis andersenii]
 gi|159765834|gb|ABW98061.1| kin(cdc) [Hemiselmis andersenii]
          Length = 77

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 49/70 (70%), Positives = 61/70 (87%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI+YSEKYFD  YEYRHV+LPP++ KL+P NRLL+E EWR+ G+QQS+GW+HY+IH PEP
Sbjct: 5  QIKYSEKYFDCVYEYRHVILPPNLLKLIPPNRLLTEAEWRSYGIQQSKGWIHYSIHPPEP 64

Query: 63 HIMLFRRPLN 72
          HI+LFRR L 
Sbjct: 65 HILLFRRELK 74


>gi|357610022|gb|EHJ66790.1| cyclin-dependent kinase regulatory subunit [Danaus plexippus]
          Length = 93

 Score =  115 bits (289), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 47/70 (67%), Positives = 62/70 (88%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          + QIQYSE+Y DD YEYRHV+LPPD+A+L+PK+ L++ETEWR +GVQQS GW+H+ +H P
Sbjct: 3  VDQIQYSERYNDDVYEYRHVILPPDIARLVPKSHLMTETEWRNLGVQQSPGWLHFMVHNP 62

Query: 61 EPHIMLFRRP 70
          EPH++LFRRP
Sbjct: 63 EPHVLLFRRP 72


>gi|118780693|ref|XP_310353.5| AGAP003796-PA [Anopheles gambiae str. PEST]
 gi|116130981|gb|EAA06091.3| AGAP003796-PA [Anopheles gambiae str. PEST]
          Length = 80

 Score =  115 bits (288), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 50/68 (73%), Positives = 59/68 (86%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QIQYSEKY+DD YEYRHV+LPPD+AK +PK  L++ETEWR +GVQQS GWV Y IH PEP
Sbjct: 5  QIQYSEKYYDDVYEYRHVILPPDLAKYVPKTHLMTETEWRNLGVQQSPGWVLYMIHSPEP 64

Query: 63 HIMLFRRP 70
          H++LFRRP
Sbjct: 65 HVLLFRRP 72


>gi|443697191|gb|ELT97726.1| hypothetical protein CAPTEDRAFT_132798 [Capitella teleta]
 gi|443697192|gb|ELT97727.1| hypothetical protein CAPTEDRAFT_132828 [Capitella teleta]
          Length = 76

 Score =  115 bits (288), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 48/71 (67%), Positives = 61/71 (85%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          + QI YSEKY+DD YE+RHV+LP D+AKL+PK  L++E+EWR +GVQQS GW+HY +H P
Sbjct: 3  VNQITYSEKYYDDFYEFRHVILPADIAKLVPKTHLMTESEWRNLGVQQSPGWIHYMVHAP 62

Query: 61 EPHIMLFRRPL 71
          EPHI+LFRRPL
Sbjct: 63 EPHILLFRRPL 73


>gi|195115960|ref|XP_002002524.1| GI12276 [Drosophila mojavensis]
 gi|193913099|gb|EDW11966.1| GI12276 [Drosophila mojavensis]
          Length = 75

 Score =  115 bits (288), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 48/67 (71%), Positives = 60/67 (89%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I YS+KY+D+ +EYRHVVLP D+ KL+PK  L++ETEWR+IGVQQSRGW+HY IH+PEPH
Sbjct: 5  IYYSDKYYDEKFEYRHVVLPKDLVKLVPKTHLMTETEWRSIGVQQSRGWIHYMIHKPEPH 64

Query: 64 IMLFRRP 70
          I+LFRRP
Sbjct: 65 ILLFRRP 71


>gi|299472448|emb|CBN79722.2| conserved unknown protein (Partial) [Ectocarpus siliculosus]
          Length = 100

 Score =  115 bits (288), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 49/72 (68%), Positives = 61/72 (84%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          M +I YSEKY D ++EYRHV+LP + AK+LP++RLL+E EWR +GVQQSRGW HYA+H P
Sbjct: 1  MNRIDYSEKYVDGSFEYRHVILPKETAKILPQSRLLTEDEWRNLGVQQSRGWQHYAVHTP 60

Query: 61 EPHIMLFRRPLN 72
          EPHI+LFRRPL 
Sbjct: 61 EPHILLFRRPLG 72


>gi|21355377|ref|NP_649817.1| Cyclin-dependent kinase subunit 85A, isoform A [Drosophila
          melanogaster]
 gi|386765351|ref|NP_001246992.1| Cyclin-dependent kinase subunit 85A, isoform B [Drosophila
          melanogaster]
 gi|442618039|ref|NP_001262383.1| Cyclin-dependent kinase subunit 85A, isoform C [Drosophila
          melanogaster]
 gi|194903740|ref|XP_001980929.1| GG17431 [Drosophila erecta]
 gi|7299072|gb|AAF54272.1| Cyclin-dependent kinase subunit 85A, isoform A [Drosophila
          melanogaster]
 gi|20976840|gb|AAM27495.1| GM01344p [Drosophila melanogaster]
 gi|190652632|gb|EDV49887.1| GG17431 [Drosophila erecta]
 gi|220950320|gb|ACL87703.1| Cks85A-PA [synthetic construct]
 gi|220959304|gb|ACL92195.1| Cks85A-PA [synthetic construct]
 gi|383292575|gb|AFH06310.1| Cyclin-dependent kinase subunit 85A, isoform B [Drosophila
          melanogaster]
 gi|440217209|gb|AGB95765.1| Cyclin-dependent kinase subunit 85A, isoform C [Drosophila
          melanogaster]
          Length = 96

 Score =  114 bits (286), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 59/67 (88%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QIQYSEKYFDD +EYRHV+LPPD+AK +PK  L++ETEWR +GVQQS GWVHY +H PEP
Sbjct: 5  QIQYSEKYFDDNFEYRHVILPPDLAKHVPKAHLMTETEWRNLGVQQSPGWVHYMVHAPEP 64

Query: 63 HIMLFRR 69
          H++LFRR
Sbjct: 65 HVILFRR 71


>gi|340382581|ref|XP_003389797.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1-like
          [Amphimedon queenslandica]
          Length = 94

 Score =  114 bits (285), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 60/69 (86%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I YS+KY+DDTYEYRHV+LP D+AKL+P+ +L++E EWR +GVQQS+GWVHY  H PEPH
Sbjct: 10 IYYSDKYYDDTYEYRHVMLPKDIAKLVPRQKLMTEGEWRRLGVQQSQGWVHYMFHNPEPH 69

Query: 64 IMLFRRPLN 72
          I+LFRRP+ 
Sbjct: 70 ILLFRRPIT 78


>gi|328706985|ref|XP_001948414.2| PREDICTED: cyclin-dependent kinases regulatory subunit-like
          [Acyrthosiphon pisum]
          Length = 75

 Score =  114 bits (285), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 50/68 (73%), Positives = 59/68 (86%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY+DD YEYRHVVLP ++AK +PK  LLSE EWR+IGVQQS+GWVHY IH PEP
Sbjct: 5  QIYYSDKYYDDKYEYRHVVLPKEMAKSIPKTHLLSEDEWRSIGVQQSKGWVHYMIHEPEP 64

Query: 63 HIMLFRRP 70
          HI+LF+RP
Sbjct: 65 HILLFKRP 72


>gi|195330630|ref|XP_002032006.1| GM26323 [Drosophila sechellia]
 gi|194120949|gb|EDW42992.1| GM26323 [Drosophila sechellia]
          Length = 96

 Score =  114 bits (285), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 59/67 (88%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QIQYSEKYFDD +EYRHV+LPPD+AK +PK  L++ETEWR +GVQQS GWVHY +H PEP
Sbjct: 5  QIQYSEKYFDDKFEYRHVILPPDLAKHVPKAHLMTETEWRNLGVQQSPGWVHYMVHAPEP 64

Query: 63 HIMLFRR 69
          H++LFRR
Sbjct: 65 HVILFRR 71


>gi|225712426|gb|ACO12059.1| Cyclin-dependent kinases regulatory subunit 1 [Lepeophtheirus
          salmonis]
 gi|290562075|gb|ADD38434.1| Cyclin-dependent kinases regulatory subunit 1 [Lepeophtheirus
          salmonis]
          Length = 74

 Score =  114 bits (285), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 59/69 (85%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I YSEKYFDD YEYRHV+LP ++AKL+PK  L+SE+EWR +GVQQS+GWVHY  H PEPH
Sbjct: 6  IYYSEKYFDDKYEYRHVMLPKELAKLVPKTHLMSESEWRNLGVQQSQGWVHYMAHEPEPH 65

Query: 64 IMLFRRPLN 72
          I+LFRRP+ 
Sbjct: 66 ILLFRRPMT 74


>gi|157109134|ref|XP_001650539.1| cyclin-dependent kinases regulatory subunit. putative [Aedes
          aegypti]
 gi|108879113|gb|EAT43338.1| AAEL005232-PA [Aedes aegypti]
          Length = 96

 Score =  114 bits (285), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 49/68 (72%), Positives = 60/68 (88%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QIQYSEKY+DD YEYRHV+LPPD+A+ +PK+ L++ETEWR +GVQQS GWV Y +H PEP
Sbjct: 5  QIQYSEKYYDDVYEYRHVILPPDLARNVPKSHLMTETEWRNLGVQQSPGWVMYMMHAPEP 64

Query: 63 HIMLFRRP 70
          HI+LFRRP
Sbjct: 65 HILLFRRP 72


>gi|195499184|ref|XP_002096841.1| GE24833 [Drosophila yakuba]
 gi|194182942|gb|EDW96553.1| GE24833 [Drosophila yakuba]
          Length = 96

 Score =  114 bits (285), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 59/67 (88%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QIQYSEKYFDD +EYRHV+LPPD+AK +PK  L++ETEWR +GVQQS GWVHY +H PEP
Sbjct: 5  QIQYSEKYFDDEFEYRHVILPPDLAKHVPKAHLMTETEWRNLGVQQSPGWVHYMVHAPEP 64

Query: 63 HIMLFRR 69
          H++LFRR
Sbjct: 65 HVILFRR 71


>gi|157927984|gb|ABW03288.1| CDC28 protein kinase regulatory subunit 1B [synthetic construct]
          Length = 79

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 50/69 (72%), Positives = 60/69 (86%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY DD +EYRHV+LP D+AKL+PK  L+SE+EWR +GVQQS+GWVHY IH PEP
Sbjct: 5  QIYYSDKYDDDEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEP 64

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 65 HILLFRRPL 73


>gi|391345667|ref|XP_003747106.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1-like
          [Metaseiulus occidentalis]
          Length = 94

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 53/87 (60%), Positives = 66/87 (75%), Gaps = 4/87 (4%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I YSE+Y+D+TYEYRHVVLP D+A  +PK  L+SETEWR IGVQQS GW+HY IH PEPH
Sbjct: 5  IYYSERYYDETYEYRHVVLPKDIAAKVPKTHLMSETEWRNIGVQQSPGWIHYMIHEPEPH 64

Query: 64 IMLFRRPLNYQ----QQQENQAQQNIL 86
          I+ FRRPL  +      QE Q ++++L
Sbjct: 65 ILCFRRPLPKEGAPPATQEEQVRRDML 91


>gi|427785983|gb|JAA58443.1| Putative cyclin-dependent protein kinase cdc28 regulatory subunit
          cks1 [Rhipicephalus pulchellus]
          Length = 89

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 48/68 (70%), Positives = 60/68 (88%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I YS+KY+D+ +EYRHVVLP ++AKL+PK  L++E+EWR IGVQQS+GWVHY IH PEPH
Sbjct: 6  IYYSDKYYDEKFEYRHVVLPKEIAKLVPKAHLMTESEWRGIGVQQSQGWVHYMIHEPEPH 65

Query: 64 IMLFRRPL 71
          I+LFRRPL
Sbjct: 66 ILLFRRPL 73


>gi|195398550|ref|XP_002057884.1| GJ17855 [Drosophila virilis]
 gi|194141538|gb|EDW57957.1| GJ17855 [Drosophila virilis]
          Length = 75

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I YS+KY+D+ +EYRHVVLP ++ KL+PK  L++ETEWR+IGVQQSRGW+HY IH+PEPH
Sbjct: 5  IYYSDKYYDEKFEYRHVVLPKELVKLVPKTHLMTETEWRSIGVQQSRGWIHYMIHKPEPH 64

Query: 64 IMLFRRP 70
          I+LFRRP
Sbjct: 65 ILLFRRP 71


>gi|167521890|ref|XP_001745283.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776241|gb|EDQ89861.1| predicted protein [Monosiga brevicollis MX1]
          Length = 74

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 48/67 (71%), Positives = 59/67 (88%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS KYFDDT+EYRHV+LP  +A+ +P +RL++ETEWR +GVQQSRGW+HY IHRPEP
Sbjct: 4  QICYSVKYFDDTHEYRHVILPKSIARHVPDDRLMTETEWRNLGVQQSRGWIHYMIHRPEP 63

Query: 63 HIMLFRR 69
          HI+LFRR
Sbjct: 64 HILLFRR 70


>gi|198476074|ref|XP_002132254.1| GA25305 [Drosophila pseudoobscura pseudoobscura]
 gi|198137533|gb|EDY69656.1| GA25305 [Drosophila pseudoobscura pseudoobscura]
          Length = 75

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 60/67 (89%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I YS+KY+D+ +EYRHVVLP ++ KL+PK  L++ETEWR+IGVQQSRGW+HY IH+PEPH
Sbjct: 5  IYYSDKYYDEKFEYRHVVLPKELVKLVPKTHLMTETEWRSIGVQQSRGWIHYMIHKPEPH 64

Query: 64 IMLFRRP 70
          I+LFRRP
Sbjct: 65 ILLFRRP 71


>gi|327289866|ref|XP_003229645.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1-like
          [Anolis carolinensis]
          Length = 79

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 50/69 (72%), Positives = 60/69 (86%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY D+ YEYRHV+LP D+AKL+PK  L+SE+EWR +GVQQS+GWVHY IH PEP
Sbjct: 5  QIYYSDKYDDEEYEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEP 64

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 65 HILLFRRPL 73


>gi|195392066|ref|XP_002054680.1| GJ24587 [Drosophila virilis]
 gi|194152766|gb|EDW68200.1| GJ24587 [Drosophila virilis]
          Length = 93

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 48/67 (71%), Positives = 59/67 (88%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QIQYSEKYFDD +EYRHV+LP D+AK +PK+ L++ETEWR +GVQQS GWVHY +H PEP
Sbjct: 5  QIQYSEKYFDDKFEYRHVILPADLAKHVPKSHLMTETEWRNLGVQQSPGWVHYMMHAPEP 64

Query: 63 HIMLFRR 69
          H++LFRR
Sbjct: 65 HVILFRR 71


>gi|109121543|ref|XP_001096876.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1-like
          isoform 1 [Macaca mulatta]
 gi|355701820|gb|EHH29173.1| hypothetical protein EGK_09525 [Macaca mulatta]
          Length = 79

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 60/69 (86%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY D+ +EYRHVVLP D+AKL+PK RL+SE+EWR +G+QQS+GWVHY I  PEP
Sbjct: 5  QIDYSDKYDDEEFEYRHVVLPKDIAKLVPKTRLMSESEWRNLGIQQSQGWVHYMIQEPEP 64

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 65 HILLFRRPL 73


>gi|57525739|ref|NP_001003593.1| CDC28 protein kinase 1B [Danio rerio]
 gi|50418152|gb|AAH77092.1| Zgc:101026 [Danio rerio]
          Length = 79

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 50/69 (72%), Positives = 60/69 (86%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY DD +EYRHV+LP D+AK +PK  L+SETEWR +GVQQS+GWVHY IH+PEP
Sbjct: 5  QIYYSDKYDDDKFEYRHVMLPKDIAKRVPKTHLMSETEWRNLGVQQSQGWVHYMIHQPEP 64

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 65 HILLFRRPL 73


>gi|148698450|gb|EDL30397.1| mCG5547 [Mus musculus]
          Length = 79

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 51/75 (68%), Positives = 63/75 (84%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KYFD+ YEYRHV+LP +++K +PK  L+SE EWR +GVQQSRGWVHY IH PEP
Sbjct: 5  QIYYSDKYFDEHYEYRHVMLPRELSKQVPKTHLMSEEEWRRLGVQQSRGWVHYMIHEPEP 64

Query: 63 HIMLFRRPLNYQQQQ 77
          HI+LFRRPL  +QQ+
Sbjct: 65 HILLFRRPLPKEQQK 79


>gi|1168966|sp|P41384.1|CKS1_PATVU RecName: Full=Cyclin-dependent kinases regulatory subunit;
          AltName: Full=SUC1 homolog
 gi|431959|emb|CAA82207.1| suc1 homologue [Patella vulgata]
          Length = 76

 Score =  112 bits (281), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 48/72 (66%), Positives = 60/72 (83%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KYFD+ +EYRHV+LP D+AK++PKN L+SE EWR+IGVQQS GW+HY  H PEP
Sbjct: 5  QIYYSDKYFDEDFEYRHVMLPKDIAKMVPKNHLMSEAEWRSIGVQQSHGWIHYMKHEPEP 64

Query: 63 HIMLFRRPLNYQ 74
          HI+LFRR +  Q
Sbjct: 65 HILLFRRKVTGQ 76


>gi|325183333|emb|CCA17791.1| cyclindependent kinase regulatory subunit putative [Albugo
          laibachii Nc14]
          Length = 102

 Score =  112 bits (281), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 50/71 (70%), Positives = 61/71 (85%), Gaps = 1/71 (1%)

Query: 2  GQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPE 61
           +I+YSEKY DD YE+RHV+LP +V + LP +RLL+E EWR +GVQQSRGWVHYAIH+PE
Sbjct: 7  SRIEYSEKYADDEYEFRHVILPKEVQRSLP-DRLLTEAEWRQLGVQQSRGWVHYAIHKPE 65

Query: 62 PHIMLFRRPLN 72
          PHI+LFRRPL 
Sbjct: 66 PHILLFRRPLG 76


>gi|146097182|ref|XP_001468066.1| cyclin-dependent kinase regulatory subunit [Leishmania infantum
          JPCM5]
 gi|154343611|ref|XP_001567751.1| cyclin-dependent kinase regulatory subunit [Leishmania
          braziliensis MHOM/BR/75/M2904]
 gi|157874443|ref|XP_001685705.1| cyclin-dependent kinase regulatory subunit [Leishmania major
          strain Friedlin]
 gi|398021284|ref|XP_003863805.1| cyclin-dependent kinase regulatory subunit [Leishmania donovani]
 gi|68128777|emb|CAJ08910.1| cyclin-dependent kinase regulatory subunit [Leishmania major
          strain Friedlin]
 gi|134065083|emb|CAM43197.1| cyclin-dependent kinase regulatory subunit [Leishmania
          braziliensis MHOM/BR/75/M2904]
 gi|134072432|emb|CAM71142.1| cyclin-dependent kinase regulatory subunit [Leishmania infantum
          JPCM5]
 gi|322502038|emb|CBZ37122.1| cyclin-dependent kinase regulatory subunit [Leishmania donovani]
          Length = 99

 Score =  112 bits (281), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 45/68 (66%), Positives = 61/68 (89%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          +I YS+KY+DD +EYRHV+LP D+A+L+P +RL+SE EWR +GVQQS+GWVHY IH+PEP
Sbjct: 30 KILYSDKYYDDVFEYRHVILPKDLARLVPTSRLMSEMEWRQLGVQQSQGWVHYMIHKPEP 89

Query: 63 HIMLFRRP 70
          H++LF+RP
Sbjct: 90 HVLLFKRP 97


>gi|193788590|ref|NP_001106278.1| cyclin-dependent kinases regulatory subunit 1 [Taeniopygia
          guttata]
 gi|197127297|gb|ACH43795.1| putative CDC28 protein kinase 1B [Taeniopygia guttata]
 gi|197127298|gb|ACH43796.1| putative CDC28 protein kinase 1B [Taeniopygia guttata]
          Length = 79

 Score =  112 bits (280), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 50/69 (72%), Positives = 60/69 (86%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY D+ +EYRHV+LP D+AKL+PK  LLSE+EWR +GVQQS+GWVHY IH PEP
Sbjct: 5  QIYYSDKYDDEEFEYRHVMLPKDIAKLVPKTHLLSESEWRNLGVQQSQGWVHYMIHEPEP 64

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 65 HILLFRRPL 73


>gi|401427483|ref|XP_003878225.1| cyclin-dependent kinase regulatory subunit [Leishmania mexicana
          MHOM/GT/2001/U1103]
 gi|2493729|sp|Q25330.1|CKS1_LEIME RecName: Full=Cyclin-dependent kinases regulatory subunit;
          AltName: Full=P12LMMCKS1
 gi|871409|emb|CAA90037.1| p12LmmCKS1 [Leishmania mexicana]
 gi|322494472|emb|CBZ29774.1| cyclin-dependent kinase regulatory subunit [Leishmania mexicana
          MHOM/GT/2001/U1103]
          Length = 99

 Score =  112 bits (280), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 45/68 (66%), Positives = 61/68 (89%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          +I YS+KY+DD +EYRHV+LP D+A+L+P +RL+SE EWR +GVQQS+GWVHY IH+PEP
Sbjct: 30 KILYSDKYYDDMFEYRHVILPKDLARLVPTSRLMSEMEWRQLGVQQSQGWVHYMIHKPEP 89

Query: 63 HIMLFRRP 70
          H++LF+RP
Sbjct: 90 HVLLFKRP 97


>gi|410911822|ref|XP_003969389.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1-like
          [Takifugu rubripes]
          Length = 78

 Score =  112 bits (280), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 50/70 (71%), Positives = 60/70 (85%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY DD YEYRHV+LP ++AK +PK  L+SETEWR +GVQQS+GWVHY IH+PEP
Sbjct: 5  QIYYSDKYDDDKYEYRHVMLPKEIAKRVPKTHLMSETEWRNLGVQQSQGWVHYMIHQPEP 64

Query: 63 HIMLFRRPLN 72
          HI+LFRRPL 
Sbjct: 65 HILLFRRPLT 74


>gi|194743522|ref|XP_001954249.1| GF16842 [Drosophila ananassae]
 gi|190627286|gb|EDV42810.1| GF16842 [Drosophila ananassae]
          Length = 98

 Score =  112 bits (280), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 48/67 (71%), Positives = 58/67 (86%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QIQYSEKYFDD +EYRHV+LP D+AK +PK  L++ETEWR +GVQQS GWVHY +H PEP
Sbjct: 5  QIQYSEKYFDDKFEYRHVILPADLAKHVPKAHLMTETEWRNLGVQQSPGWVHYMVHAPEP 64

Query: 63 HIMLFRR 69
          H++LFRR
Sbjct: 65 HVILFRR 71


>gi|387015086|gb|AFJ49662.1| CDC28 protein kinase regulatory subunit 1B [Crotalus adamanteus]
          Length = 79

 Score =  112 bits (280), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 60/69 (86%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY D+ +EYRHV+LP D+AKL+PK  L+SE+EWR +GVQQS+GWVHY IH PEP
Sbjct: 5  QIYYSDKYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEP 64

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 65 HILLFRRPL 73


>gi|125778035|ref|XP_001359811.1| GA22037 [Drosophila pseudoobscura pseudoobscura]
 gi|195157398|ref|XP_002019583.1| GL12136 [Drosophila persimilis]
 gi|54639561|gb|EAL28963.1| GA22037 [Drosophila pseudoobscura pseudoobscura]
 gi|194116174|gb|EDW38217.1| GL12136 [Drosophila persimilis]
          Length = 91

 Score =  112 bits (279), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 48/67 (71%), Positives = 58/67 (86%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QIQYSEKYFDD +EYRHV+LP D+AK +PK  L++ETEWR +GVQQS GWVHY +H PEP
Sbjct: 5  QIQYSEKYFDDKFEYRHVILPSDLAKHVPKAHLMTETEWRNLGVQQSPGWVHYMMHAPEP 64

Query: 63 HIMLFRR 69
          H++LFRR
Sbjct: 65 HVILFRR 71


>gi|126307770|ref|XP_001373559.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1-like
           [Monodelphis domestica]
          Length = 120

 Score =  112 bits (279), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 60/69 (86%)

Query: 3   QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
           QI YS+KY D+ +EYRHV+LP D+AKL+PK  L+SE+EWR +GVQQS+GWVHY IH PEP
Sbjct: 46  QIYYSDKYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEP 105

Query: 63  HIMLFRRPL 71
           HI+LFRRPL
Sbjct: 106 HILLFRRPL 114


>gi|30585357|gb|AAP36951.1| Homo sapiens CDC28 protein kinase regulatory subunit 1B
          [synthetic construct]
 gi|60653169|gb|AAX29279.1| CDC28 protein kinase regulatory subunit 1B [synthetic construct]
 gi|60653171|gb|AAX29280.1| CDC28 protein kinase regulatory subunit 1B [synthetic construct]
          Length = 80

 Score =  112 bits (279), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 60/69 (86%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY D+ +EYRHV+LP D+AKL+PK  L+SE+EWR +GVQQS+GWVHY IH PEP
Sbjct: 5  QIYYSDKYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEP 64

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 65 HILLFRRPL 73


>gi|145504344|ref|XP_001438144.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124405305|emb|CAK70747.1| unnamed protein product [Paramecium tetraurelia]
          Length = 92

 Score =  112 bits (279), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 50/70 (71%), Positives = 59/70 (84%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          +I+YS+KYFDD YEYRHV+LP  + K + K +LL+E EWRAIGVQQSRGWVHY  HRPEP
Sbjct: 7  EIEYSDKYFDDYYEYRHVILPKHIFKKITKGKLLNEMEWRAIGVQQSRGWVHYETHRPEP 66

Query: 63 HIMLFRRPLN 72
          HI+LFRRP N
Sbjct: 67 HILLFRRPKN 76


>gi|348579742|ref|XP_003475638.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1-like
          [Cavia porcellus]
          Length = 79

 Score =  112 bits (279), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 60/69 (86%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY D+ +EYRHV+LP D+AKL+PK  L+SE+EWR +GVQQS+GWVHY IH PEP
Sbjct: 5  QIYYSDKYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEP 64

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 65 HILLFRRPL 73


>gi|12847359|dbj|BAB27540.1| unnamed protein product [Mus musculus]
          Length = 79

 Score =  112 bits (279), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 60/69 (86%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY D+ +EYRHV+LP D+AKL+PK  L+SE+EWR +GVQQS+GWVHY IH PEP
Sbjct: 5  QIYYSDKYEDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEP 64

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 65 HILLFRRPL 73


>gi|156548690|ref|XP_001602564.1| PREDICTED: probable cyclin-dependent kinases regulatory
          subunit-like [Nasonia vitripennis]
          Length = 92

 Score =  112 bits (279), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 48/67 (71%), Positives = 58/67 (86%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QIQYSEKY DD YEYRHV+LPPD+ K +PK+ L++E+EWR +GVQQS GWVHY +H PEP
Sbjct: 5  QIQYSEKYTDDKYEYRHVILPPDIGKQVPKSHLMTESEWRNLGVQQSPGWVHYMMHGPEP 64

Query: 63 HIMLFRR 69
          HI+LFRR
Sbjct: 65 HILLFRR 71


>gi|395845285|ref|XP_003795372.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1
          [Otolemur garnettii]
          Length = 78

 Score =  112 bits (279), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 60/69 (86%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY D+ +EYRHV+LP D+AKL+PK  L+SE+EWR +GVQQS+GWVHY IH PEP
Sbjct: 5  QIYYSDKYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEP 64

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 65 HILLFRRPL 73


>gi|4502857|ref|NP_001817.1| cyclin-dependent kinases regulatory subunit 1 [Homo sapiens]
 gi|8393135|ref|NP_058600.1| cyclin-dependent kinases regulatory subunit 1 [Mus musculus]
 gi|164518990|ref|NP_001106782.1| cyclin-dependent kinases regulatory subunit 1 [Bos taurus]
 gi|209364532|ref|NP_001129221.1| cyclin-dependent kinases regulatory subunit 1 [Rattus norvegicus]
 gi|343780903|ref|NP_001230471.1| cyclin-dependent kinases regulatory subunit 1 [Sus scrofa]
 gi|357527348|ref|NP_001239475.1| cyclin-dependent kinases regulatory subunit 1 [Pan troglodytes]
 gi|388452736|ref|NP_001252676.1| cyclin-dependent kinases regulatory subunit 1 [Macaca mulatta]
 gi|73961622|ref|XP_855067.1| PREDICTED: uncharacterized protein LOC612237 [Canis lupus
          familiaris]
 gi|296229027|ref|XP_002760106.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1-like
          [Callithrix jacchus]
 gi|297663348|ref|XP_002810136.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1 [Pongo
          abelii]
 gi|301774234|ref|XP_002922528.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1-like
          [Ailuropoda melanoleuca]
 gi|332220553|ref|XP_003259420.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1
          [Nomascus leucogenys]
 gi|338725001|ref|XP_003365059.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1-like
          [Equus caballus]
 gi|344286824|ref|XP_003415156.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1-like
          [Loxodonta africana]
 gi|397473545|ref|XP_003808269.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1-like
          [Pan paniscus]
 gi|397492476|ref|XP_003817148.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1 [Pan
          paniscus]
 gi|402855114|ref|XP_003892186.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1-like
          [Papio anubis]
 gi|402856431|ref|XP_003892793.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1 [Papio
          anubis]
 gi|402856433|ref|XP_003892794.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1 [Papio
          anubis]
 gi|403293625|ref|XP_003937813.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1 [Saimiri
          boliviensis boliviensis]
 gi|410986966|ref|XP_003999779.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1 [Felis
          catus]
 gi|426216737|ref|XP_004002614.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1 [Ovis
          aries]
 gi|426331814|ref|XP_004026888.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1 [Gorilla
          gorilla gorilla]
 gi|46577579|sp|P61024.1|CKS1_HUMAN RecName: Full=Cyclin-dependent kinases regulatory subunit 1;
          Short=CKS-1
 gi|46577580|sp|P61025.1|CKS1_MOUSE RecName: Full=Cyclin-dependent kinases regulatory subunit 1;
          Short=CKS-1; AltName: Full=Sid 1334
 gi|118572225|sp|Q0P5A5.1|CKS1_BOVIN RecName: Full=Cyclin-dependent kinases regulatory subunit 1;
          Short=CKS-1
 gi|1421472|pdb|1DKS|A Chain A, Ckshs1: Human Cyclin Dependent Kinase Subunit, Type 1 In
          Complex With Phosphate
 gi|1421473|pdb|1DKS|B Chain B, Ckshs1: Human Cyclin Dependent Kinase Subunit, Type 1 In
          Complex With Phosphate
 gi|1421474|pdb|1DKT|A Chain A, Ckshs1: Human Cyclin Dependent Kinase Subunit, Type 1
          Complex With Metavanadate
 gi|1421475|pdb|1DKT|B Chain B, Ckshs1: Human Cyclin Dependent Kinase Subunit, Type 1
          Complex With Metavanadate
 gi|6729910|pdb|1BUH|B Chain B, Crystal Structure Of The Human Cdk2 Kinase Complex With
          Cell Cycle-Regulatory Protein Ckshs1
 gi|12751047|gb|AAK07518.1|AF274941_1 PNAS-16 [Homo sapiens]
 gi|12751121|gb|AAK07553.1|AF279897_1 PNAS-143 [Homo sapiens]
 gi|29977|emb|CAA38702.1| Cks1 protein homologue [Homo sapiens]
 gi|5931567|dbj|BAA84694.1| sid1334p [Mus musculus]
 gi|12848124|dbj|BAB27837.1| unnamed protein product [Mus musculus]
 gi|14043535|gb|AAH07751.1| CDC28 protein kinase regulatory subunit 1B [Homo sapiens]
 gi|15990489|gb|AAH15629.1| CDC28 protein kinase regulatory subunit 1B [Homo sapiens]
 gi|26368983|dbj|BAC25295.1| unnamed protein product [Mus musculus]
 gi|30583231|gb|AAP35860.1| CDC28 protein kinase regulatory subunit 1B [Homo sapiens]
 gi|47125424|gb|AAH70319.1| CDC28 protein kinase regulatory subunit 1B [Homo sapiens]
 gi|47125427|gb|AAH70320.1| CDC28 protein kinase regulatory subunit 1B [Homo sapiens]
 gi|49904656|gb|AAH76579.1| CDC28 protein kinase 1b [Mus musculus]
 gi|60656223|gb|AAX32675.1| CDC28 protein kinase regulatory subunit 1B [synthetic construct]
 gi|60656225|gb|AAX32676.1| CDC28 protein kinase regulatory subunit 1B [synthetic construct]
 gi|112362118|gb|AAI20302.1| CDC28 protein kinase regulatory subunit 1B [Bos taurus]
 gi|119573549|gb|EAW53164.1| CDC28 protein kinase regulatory subunit 1B, isoform CRA_b [Homo
          sapiens]
 gi|123979594|gb|ABM81626.1| CDC28 protein kinase regulatory subunit 1B [synthetic construct]
 gi|123989962|gb|ABM83898.1| CDC28 protein kinase regulatory subunit 1B [synthetic construct]
 gi|123994417|gb|ABM84810.1| CDC28 protein kinase regulatory subunit 1B [synthetic construct]
 gi|123998565|gb|ABM86884.1| CDC28 protein kinase regulatory subunit 1B [synthetic construct]
 gi|148683250|gb|EDL15197.1| mCG17538 [Mus musculus]
 gi|149048054|gb|EDM00630.1| RGD1561797 (predicted) [Rattus norvegicus]
 gi|157927982|gb|ABW03287.1| CDC28 protein kinase regulatory subunit 1B [synthetic construct]
 gi|187469557|gb|AAI67077.1| RGD1561797 protein [Rattus norvegicus]
 gi|189053090|dbj|BAG34712.1| unnamed protein product [Homo sapiens]
 gi|197245984|gb|AAI68780.1| RGD1561797 protein [Rattus norvegicus]
 gi|296489703|tpg|DAA31816.1| TPA: CDC28 protein kinase 1B [Bos taurus]
 gi|307684726|dbj|BAJ20403.1| CDC28 protein kinase regulatory subunit 1B [synthetic construct]
 gi|355558519|gb|EHH15299.1| hypothetical protein EGK_01367 [Macaca mulatta]
 gi|380809418|gb|AFE76584.1| cyclin-dependent kinases regulatory subunit 1 [Macaca mulatta]
 gi|383415661|gb|AFH31044.1| cyclin-dependent kinases regulatory subunit 1 [Macaca mulatta]
 gi|410208488|gb|JAA01463.1| CDC28 protein kinase regulatory subunit 1B [Pan troglodytes]
 gi|410248416|gb|JAA12175.1| CDC28 protein kinase regulatory subunit 1B [Pan troglodytes]
 gi|410296620|gb|JAA26910.1| CDC28 protein kinase regulatory subunit 1B [Pan troglodytes]
 gi|410349829|gb|JAA41518.1| CDC28 protein kinase regulatory subunit 1B [Pan troglodytes]
 gi|431892367|gb|ELK02807.1| Cyclin-dependent kinases regulatory subunit 1 [Pteropus alecto]
 gi|440903599|gb|ELR54236.1| Cyclin-dependent kinases regulatory subunit 1 [Bos grunniens
          mutus]
          Length = 79

 Score =  112 bits (279), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 60/69 (86%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY D+ +EYRHV+LP D+AKL+PK  L+SE+EWR +GVQQS+GWVHY IH PEP
Sbjct: 5  QIYYSDKYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEP 64

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 65 HILLFRRPL 73


>gi|163914386|ref|NP_001106277.1| cyclin-dependent kinases regulatory subunit 1 [Gallus gallus]
          Length = 79

 Score =  112 bits (279), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 60/69 (86%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY D+ +EYRHV+LP D+AKL+PK  L+SE+EWR +GVQQS+GWVHY IH PEP
Sbjct: 5  QIYYSDKYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEP 64

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 65 HILLFRRPL 73


>gi|82407881|pdb|2ASS|C Chain C, Crystal Structure Of The Skp1-Skp2-Cks1 Complex
 gi|82407884|pdb|2AST|C Chain C, Crystal Structure Of Skp1-Skp2-Cks1 In Complex With A
          P27 Peptide
          Length = 69

 Score =  112 bits (279), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 60/69 (86%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY D+ +EYRHV+LP D+AKL+PK  L+SE+EWR +GVQQS+GWVHY IH PEP
Sbjct: 1  QIYYSDKYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEP 60

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 61 HILLFRRPL 69


>gi|225581148|gb|ACN94717.1| GA22037 [Drosophila miranda]
          Length = 91

 Score =  112 bits (279), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 51/80 (63%), Positives = 65/80 (81%), Gaps = 3/80 (3%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QIQYSEKYFDD +EYRHV+LP D+AK +PK  L++ETEWR +GVQQS GWVHY +H PEP
Sbjct: 5  QIQYSEKYFDDKFEYRHVILPLDLAKHVPKAHLMTETEWRNLGVQQSPGWVHYMMHVPEP 64

Query: 63 HIMLFRRPLNYQQQQENQAQ 82
          H++LFRR    + ++EN +Q
Sbjct: 65 HVILFRRK---RVEEENASQ 81


>gi|380028381|ref|XP_003697882.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1-like
          [Apis florea]
          Length = 95

 Score =  112 bits (279), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 49/68 (72%), Positives = 58/68 (85%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QIQYSEKY DD YEYRHV+LP D+A+ +PK  L+SETEWR +GVQQS GWVHY +H PEP
Sbjct: 5  QIQYSEKYNDDKYEYRHVILPADLARHVPKTHLMSETEWRNLGVQQSPGWVHYMMHVPEP 64

Query: 63 HIMLFRRP 70
          H++LFRRP
Sbjct: 65 HVLLFRRP 72


>gi|223006704|gb|ACM69341.1| CDC28 protein kinase regulatory subunit 1B [Scylla paramamosain]
          Length = 86

 Score =  111 bits (278), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 62/70 (88%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          +I YS++Y+DD YEYRHV+LP D++KL+PK  L++E+EWR++GVQQS+GWVHY IH PEP
Sbjct: 4  RIYYSDRYYDDKYEYRHVMLPKDLSKLVPKTHLMTESEWRSLGVQQSQGWVHYMIHEPEP 63

Query: 63 HIMLFRRPLN 72
          HI+LFRRP+ 
Sbjct: 64 HILLFRRPIT 73


>gi|66534763|ref|XP_624975.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1-like
          [Apis mellifera]
          Length = 95

 Score =  111 bits (278), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 49/68 (72%), Positives = 58/68 (85%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QIQYSEKY DD YEYRHV+LP D+A+ +PK  L+SETEWR +GVQQS GWVHY +H PEP
Sbjct: 5  QIQYSEKYNDDKYEYRHVILPADLARHVPKTHLMSETEWRNLGVQQSPGWVHYMMHVPEP 64

Query: 63 HIMLFRRP 70
          H++LFRRP
Sbjct: 65 HVLLFRRP 72


>gi|260814570|ref|XP_002601987.1| hypothetical protein BRAFLDRAFT_59154 [Branchiostoma floridae]
 gi|229287292|gb|EEN57999.1| hypothetical protein BRAFLDRAFT_59154 [Branchiostoma floridae]
          Length = 82

 Score =  111 bits (278), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 48/76 (63%), Positives = 62/76 (81%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
           I YS+KY+DD +EYRHV+LP ++AKL+PK+ L+SETEWR IGVQQS+GW HY  H PEP
Sbjct: 5  HIYYSDKYYDDKFEYRHVMLPKELAKLVPKSHLMSETEWRGIGVQQSQGWCHYMKHEPEP 64

Query: 63 HIMLFRRPLNYQQQQE 78
          HI+LFRRP+    +Q+
Sbjct: 65 HILLFRRPITTPPEQQ 80


>gi|402902632|ref|XP_003914203.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1-like
          [Papio anubis]
 gi|355745710|gb|EHH50335.1| hypothetical protein EGM_01146 [Macaca fascicularis]
          Length = 79

 Score =  111 bits (278), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 60/69 (86%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY D+ +EYRHV+LP D+AKL+PK  L+SE+EWR +G+QQS+GWVHY IH PEP
Sbjct: 5  QIYYSDKYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGIQQSQGWVHYMIHEPEP 64

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 65 HILLFRRPL 73


>gi|387915790|gb|AFK11504.1| cyclin-dependent kinases regulatory subunit 2 [Callorhinchus
          milii]
          Length = 79

 Score =  111 bits (278), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 50/75 (66%), Positives = 60/75 (80%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KYFDD YEYRHV+LP ++AK +PK  L+SE EWR +GVQQS GWVHY +H PEP
Sbjct: 5  QIYYSDKYFDDEYEYRHVMLPKELAKQVPKTHLMSEDEWRKLGVQQSLGWVHYMMHEPEP 64

Query: 63 HIMLFRRPLNYQQQQ 77
          HI+LFRRPL   Q +
Sbjct: 65 HILLFRRPLPKDQDK 79


>gi|348529993|ref|XP_003452496.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1-like
          [Oreochromis niloticus]
 gi|62079648|gb|AAX61170.1| CDC28 protein kinase 1 [Oreochromis mossambicus]
          Length = 78

 Score =  111 bits (277), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 50/69 (72%), Positives = 60/69 (86%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY DD YEYRHV+LP ++AK +PK  L+SETEWR +GVQQS+GWVHY IH+PEP
Sbjct: 5  QIYYSDKYDDDKYEYRHVMLPKELAKRVPKTHLMSETEWRNLGVQQSQGWVHYMIHQPEP 64

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 65 HILLFRRPL 73


>gi|226470160|emb|CAX70361.1| Cyclin-dependent kinase subunit 30A [Schistosoma japonicum]
 gi|226489723|emb|CAX75012.1| Cyclin-dependent kinase subunit 30A [Schistosoma japonicum]
 gi|226489725|emb|CAX75013.1| Cyclin-dependent kinase subunit 30A [Schistosoma japonicum]
          Length = 95

 Score =  111 bits (277), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 50/73 (68%), Positives = 58/73 (79%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I YSEKY+DD YEYRHV LP ++AK +PKN L+SE EWR +G+QQS GWVHY IH PEPH
Sbjct: 5  IYYSEKYYDDVYEYRHVHLPKELAKQVPKNHLMSEMEWRKLGIQQSAGWVHYMIHEPEPH 64

Query: 64 IMLFRRPLNYQQQ 76
          I+LFRRP    QQ
Sbjct: 65 IILFRRPRTDMQQ 77


>gi|340727881|ref|XP_003402263.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1-like
          [Bombus terrestris]
 gi|350405817|ref|XP_003487561.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1-like
          [Bombus impatiens]
          Length = 95

 Score =  111 bits (277), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 49/68 (72%), Positives = 58/68 (85%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QIQYSEKY DD YEYRHV+LP D+A+ +PK  L+SETEWR +GVQQS GWVHY +H PEP
Sbjct: 5  QIQYSEKYNDDKYEYRHVILPVDLARHVPKTHLMSETEWRNLGVQQSPGWVHYMMHVPEP 64

Query: 63 HIMLFRRP 70
          H++LFRRP
Sbjct: 65 HVLLFRRP 72


>gi|12835151|dbj|BAB23169.1| unnamed protein product [Mus musculus]
          Length = 79

 Score =  111 bits (277), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 59/69 (85%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY D  +EYRHV+LP D+AKL+PK  L+SE+EWR +GVQQS+GWVHY IH PEP
Sbjct: 5  QIYYSDKYDDKEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEP 64

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 65 HILLFRRPL 73


>gi|76162581|gb|AAX30511.2| SJCHGC04279 protein [Schistosoma japonicum]
          Length = 92

 Score =  111 bits (277), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 50/73 (68%), Positives = 58/73 (79%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I YSEKY+DD YEYRHV LP ++AK +PKN L+SE EWR +G+QQS GWVHY IH PEPH
Sbjct: 2  IYYSEKYYDDVYEYRHVHLPKELAKQVPKNHLMSEMEWRKLGIQQSAGWVHYMIHEPEPH 61

Query: 64 IMLFRRPLNYQQQ 76
          I+LFRRP    QQ
Sbjct: 62 IILFRRPRTDMQQ 74


>gi|321461144|gb|EFX72179.1| hypothetical protein DAPPUDRAFT_111007 [Daphnia pulex]
          Length = 75

 Score =  111 bits (277), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 45/68 (66%), Positives = 60/68 (88%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          +IQYS+KY D+ +EYRHV+LPP++AKL+P+  L++ETEWR +GVQQS GWVHY +H PEP
Sbjct: 6  EIQYSDKYTDENFEYRHVILPPEMAKLVPRTHLMTETEWRNLGVQQSPGWVHYMVHNPEP 65

Query: 63 HIMLFRRP 70
          H++LFRRP
Sbjct: 66 HVLLFRRP 73


>gi|195051059|ref|XP_001993023.1| GH13319 [Drosophila grimshawi]
 gi|193900082|gb|EDV98948.1| GH13319 [Drosophila grimshawi]
          Length = 75

 Score =  111 bits (277), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 59/67 (88%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I YS+KY+D+ +EYRHVVLP ++ KL+PK  L++E EWR+IGVQQSRGW+HY IH+PEPH
Sbjct: 5  IYYSDKYYDEQFEYRHVVLPKELVKLVPKTHLMTEMEWRSIGVQQSRGWIHYMIHKPEPH 64

Query: 64 IMLFRRP 70
          I+LFRRP
Sbjct: 65 ILLFRRP 71


>gi|225716180|gb|ACO13936.1| Cyclin-dependent kinases regulatory subunit 1 [Esox lucius]
          Length = 76

 Score =  110 bits (276), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 60/69 (86%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY D+ +EYRHV+LP D+AK +PK  L+SETEWR +GVQQS+GWVHY IH+PEP
Sbjct: 5  QIYYSDKYDDEKFEYRHVMLPKDIAKRVPKTHLMSETEWRNLGVQQSQGWVHYIIHQPEP 64

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 65 HILLFRRPL 73


>gi|442758691|gb|JAA71504.1| Putative cyclin-dependent kinase regulatory subunit [Ixodes
          ricinus]
          Length = 78

 Score =  110 bits (276), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 47/68 (69%), Positives = 58/68 (85%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          IQYSEKY+DD YEYRHV+LPP++A+ +PK  L++ETEWR +GVQQS GW HY +H PEPH
Sbjct: 6  IQYSEKYYDDNYEYRHVILPPELAQSVPKTHLMTETEWRNLGVQQSLGWEHYMVHSPEPH 65

Query: 64 IMLFRRPL 71
          I+LFRR L
Sbjct: 66 ILLFRRSL 73


>gi|225706988|gb|ACO09340.1| Cyclin-dependent kinases regulatory subunit 1 [Osmerus mordax]
          Length = 78

 Score =  110 bits (276), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 60/69 (86%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY D+ +EYRHV+LP D+AK +PK  L+SETEWR +GVQQS+GW+HY IH+PEP
Sbjct: 5  QIYYSDKYDDEKFEYRHVMLPKDIAKRVPKTHLMSETEWRNLGVQQSQGWIHYMIHQPEP 64

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 65 HILLFRRPL 73


>gi|395532192|ref|XP_003768155.1| PREDICTED: uncharacterized protein LOC100917592 [Sarcophilus
           harrisii]
          Length = 170

 Score =  110 bits (276), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 60/69 (86%)

Query: 3   QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
           QI YS+KY D+ +EYRHV+LP D+AKL+PK  L++E+EWR +GVQQS+GWVHY IH PEP
Sbjct: 96  QIYYSDKYDDEEFEYRHVMLPKDIAKLVPKTHLMTESEWRNLGVQQSQGWVHYMIHEPEP 155

Query: 63  HIMLFRRPL 71
           HI+LFRRPL
Sbjct: 156 HILLFRRPL 164


>gi|225717428|gb|ACO14560.1| Cyclin-dependent kinases regulatory subunit 1 [Caligus clemensi]
          Length = 77

 Score =  110 bits (276), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 47/68 (69%), Positives = 59/68 (86%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY+DD +EYRHV+LP ++AKL+PK  L+SE+EWR +GVQQS+GWVHY  H PEP
Sbjct: 5  QIYYSDKYYDDKFEYRHVMLPKELAKLVPKTHLMSESEWRNLGVQQSQGWVHYMAHEPEP 64

Query: 63 HIMLFRRP 70
          HI+LFRRP
Sbjct: 65 HILLFRRP 72


>gi|209734488|gb|ACI68113.1| Cyclin-dependent kinases regulatory subunit 1 [Salmo salar]
 gi|209735050|gb|ACI68394.1| Cyclin-dependent kinases regulatory subunit 1 [Salmo salar]
          Length = 76

 Score =  110 bits (276), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 60/69 (86%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY D+ +EYRHV+LP D+AK +PK  L+SETEWR +GVQQS+GW+HY IH+PEP
Sbjct: 5  QIYYSDKYDDEKFEYRHVMLPKDIAKRVPKTHLMSETEWRNLGVQQSQGWIHYMIHQPEP 64

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 65 HILLFRRPL 73


>gi|154147625|ref|NP_001093685.1| CDC28 protein kinase regulatory subunit 1B [Xenopus (Silurana)
          tropicalis]
 gi|140833016|gb|AAI35374.1| cks1b protein [Xenopus (Silurana) tropicalis]
          Length = 78

 Score =  110 bits (276), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 48/68 (70%), Positives = 59/68 (86%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I YS+KY D+ YEYRHV+LP D+AK++PK  L+SE+EWR +GVQQS+GWVHY IH PEPH
Sbjct: 6  IYYSDKYDDELYEYRHVMLPKDIAKMVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEPH 65

Query: 64 IMLFRRPL 71
          I+LFRRPL
Sbjct: 66 ILLFRRPL 73


>gi|145487826|ref|XP_001429918.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124397012|emb|CAK62520.1| unnamed protein product [Paramecium tetraurelia]
          Length = 92

 Score =  110 bits (275), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 49/70 (70%), Positives = 58/70 (82%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          +I+YS+KYFDD YEYRHV+LP  + K + K +LL+E EWRAIGVQQSRGW HY  HRPEP
Sbjct: 7  EIEYSDKYFDDYYEYRHVILPKHIFKKITKGKLLNEMEWRAIGVQQSRGWAHYETHRPEP 66

Query: 63 HIMLFRRPLN 72
          HI+LFRRP N
Sbjct: 67 HILLFRRPKN 76


>gi|194765499|ref|XP_001964864.1| GF22718 [Drosophila ananassae]
 gi|190617474|gb|EDV32998.1| GF22718 [Drosophila ananassae]
          Length = 75

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 59/67 (88%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I YS+KY+D+ +EYRHVVLP ++ K++PK  L++E EWR+IGVQQSRGW+HY IH+PEPH
Sbjct: 5  IYYSDKYYDEQFEYRHVVLPKEMVKMVPKTHLMTEAEWRSIGVQQSRGWIHYMIHKPEPH 64

Query: 64 IMLFRRP 70
          I+LFRRP
Sbjct: 65 ILLFRRP 71


>gi|395514176|ref|XP_003761295.1| PREDICTED: uncharacterized protein LOC100915745 isoform 1
           [Sarcophilus harrisii]
 gi|395514178|ref|XP_003761296.1| PREDICTED: uncharacterized protein LOC100915745 isoform 2
           [Sarcophilus harrisii]
          Length = 164

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 50/75 (66%), Positives = 62/75 (82%)

Query: 3   QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
           QI YS+KYFD+ YEYRHV+LP +++K +PK  L+SE EWR +GVQQS GWVHY IH PEP
Sbjct: 90  QIYYSDKYFDEHYEYRHVMLPRELSKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEPEP 149

Query: 63  HIMLFRRPLNYQQQQ 77
           HI+LFRRPL  +QQ+
Sbjct: 150 HILLFRRPLPKEQQK 164


>gi|17136850|ref|NP_476947.1| Cyclin-dependent kinase subunit 30A [Drosophila melanogaster]
 gi|194858937|ref|XP_001969288.1| GG25340 [Drosophila erecta]
 gi|195339425|ref|XP_002036320.1| GM17424 [Drosophila sechellia]
 gi|195473261|ref|XP_002088914.1| GE18832 [Drosophila yakuba]
 gi|195577801|ref|XP_002078757.1| GD23595 [Drosophila simulans]
 gi|2493728|sp|Q24152.1|CKS1_DROME RecName: Full=Cyclin-dependent kinases regulatory subunit
 gi|1145718|gb|AAB02189.1| DmCks1 [Drosophila melanogaster]
 gi|7297507|gb|AAF52763.1| Cyclin-dependent kinase subunit 30A [Drosophila melanogaster]
 gi|16769228|gb|AAL28833.1| LD20271p [Drosophila melanogaster]
 gi|190661155|gb|EDV58347.1| GG25340 [Drosophila erecta]
 gi|194130200|gb|EDW52243.1| GM17424 [Drosophila sechellia]
 gi|194175015|gb|EDW88626.1| GE18832 [Drosophila yakuba]
 gi|194190766|gb|EDX04342.1| GD23595 [Drosophila simulans]
          Length = 74

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 59/67 (88%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I YS+KY+D+ +EYRHVVLP ++ K++PK  L++E EWR+IGVQQSRGW+HY IH+PEPH
Sbjct: 5  IYYSDKYYDEQFEYRHVVLPKELVKMVPKTHLMTEAEWRSIGVQQSRGWIHYMIHKPEPH 64

Query: 64 IMLFRRP 70
          I+LFRRP
Sbjct: 65 ILLFRRP 71


>gi|13384804|ref|NP_079691.1| cyclin-dependent kinases regulatory subunit 2 [Mus musculus]
 gi|186910245|ref|NP_001119555.1| cyclin-dependent kinases regulatory subunit 2 [Rattus norvegicus]
 gi|126333770|ref|XP_001363480.1| PREDICTED: cyclin-dependent kinases regulatory subunit 2-like
          [Monodelphis domestica]
 gi|301768489|ref|XP_002919658.1| PREDICTED: cyclin-dependent kinases regulatory subunit 2-like
          [Ailuropoda melanoleuca]
 gi|345785622|ref|XP_003432704.1| PREDICTED: cyclin-dependent kinases regulatory subunit 2-like
          [Canis lupus familiaris]
 gi|348552144|ref|XP_003461888.1| PREDICTED: cyclin-dependent kinases regulatory subunit 2-like
          [Cavia porcellus]
 gi|410977958|ref|XP_003995365.1| PREDICTED: cyclin-dependent kinases regulatory subunit 2 [Felis
          catus]
 gi|3023502|sp|P56390.1|CKS2_MOUSE RecName: Full=Cyclin-dependent kinases regulatory subunit 2;
          Short=CKS-2
 gi|12832445|dbj|BAB22110.1| unnamed protein product [Mus musculus]
 gi|12835243|dbj|BAB23199.1| unnamed protein product [Mus musculus]
 gi|18490948|gb|AAH22647.1| CDC28 protein kinase regulatory subunit 2 [Mus musculus]
 gi|63101712|gb|AAH94919.1| CDC28 protein kinase regulatory subunit 2 [Mus musculus]
 gi|74177695|dbj|BAE38947.1| unnamed protein product [Mus musculus]
 gi|148682328|gb|EDL14275.1| mCG124255 [Mus musculus]
 gi|149045004|gb|EDL98090.1| similar to Cyclin-dependent kinases regulatory subunit 2 (CKS-2)
          (predicted), isoform CRA_b [Rattus norvegicus]
 gi|171847427|gb|AAI62005.1| Cks2 protein [Rattus norvegicus]
 gi|351711633|gb|EHB14552.1| Cyclin-dependent kinases regulatory subunit 2 [Heterocephalus
          glaber]
          Length = 79

 Score =  110 bits (274), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 50/75 (66%), Positives = 62/75 (82%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KYFD+ YEYRHV+LP +++K +PK  L+SE EWR +GVQQS GWVHY IH PEP
Sbjct: 5  QIYYSDKYFDEHYEYRHVMLPRELSKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEPEP 64

Query: 63 HIMLFRRPLNYQQQQ 77
          HI+LFRRPL  +QQ+
Sbjct: 65 HILLFRRPLPKEQQK 79


>gi|114051550|ref|NP_001040111.1| cyclin-dependent kinase regulatory subunit [Bombyx mori]
 gi|87248089|gb|ABD36097.1| cyclin-dependent kinase regulatory subunit [Bombyx mori]
          Length = 142

 Score =  110 bits (274), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 45/68 (66%), Positives = 59/68 (86%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QIQYSE+Y DD YEYRHV+LPPD+A+ +PK+ L++ETEWR +GVQQS GW+H+ +H PEP
Sbjct: 5  QIQYSERYTDDVYEYRHVILPPDIARRVPKSHLMTETEWRNLGVQQSPGWLHFMVHNPEP 64

Query: 63 HIMLFRRP 70
           ++LFRRP
Sbjct: 65 QVLLFRRP 72


>gi|196002491|ref|XP_002111113.1| hypothetical protein TRIADDRAFT_21990 [Trichoplax adhaerens]
 gi|190587064|gb|EDV27117.1| hypothetical protein TRIADDRAFT_21990 [Trichoplax adhaerens]
          Length = 79

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/70 (62%), Positives = 59/70 (84%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
           + YS+KYFD+ +EYRHV+LP D+AK +PK+ L++E EWR IGVQQS+GW+HY  H PEP
Sbjct: 6  NVIYSDKYFDENFEYRHVILPKDIAKKVPKDHLMTEDEWRGIGVQQSKGWIHYMKHGPEP 65

Query: 63 HIMLFRRPLN 72
          H++LFRRPL+
Sbjct: 66 HVLLFRRPLS 75


>gi|170040399|ref|XP_001847988.1| cyclin-dependent kinaseregulatory subunit 1 [Culex
          quinquefasciatus]
 gi|167863946|gb|EDS27329.1| cyclin-dependent kinaseregulatory subunit 1 [Culex
          quinquefasciatus]
          Length = 93

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 49/68 (72%), Positives = 58/68 (85%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QIQYSEKYFDD YEYRHV+LP D+A+ +PK+ L++ETEWR +GVQQS GW  Y IH PEP
Sbjct: 5  QIQYSEKYFDDVYEYRHVILPQDLARNVPKSHLMTETEWRNLGVQQSPGWEMYMIHVPEP 64

Query: 63 HIMLFRRP 70
          HI+LFRRP
Sbjct: 65 HILLFRRP 72


>gi|148709157|gb|EDL41103.1| mCG1274, isoform CRA_b [Mus musculus]
          Length = 100

 Score =  109 bits (273), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 50/75 (66%), Positives = 62/75 (82%)

Query: 3   QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
           QI YS+KYFD+ YEYRHV+LP +++K +PK  L+SE EWR +GVQQS GWVHY IH PEP
Sbjct: 26  QIYYSDKYFDEHYEYRHVMLPRELSKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEPEP 85

Query: 63  HIMLFRRPLNYQQQQ 77
           HI+LFRRPL  +QQ+
Sbjct: 86  HILLFRRPLPKEQQK 100


>gi|291407922|ref|XP_002720185.1| PREDICTED: CDC28 protein kinase 2 [Oryctolagus cuniculus]
          Length = 79

 Score =  109 bits (273), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 50/75 (66%), Positives = 62/75 (82%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KYFD+ YEYRHV+LP +++K +PK +L+SE EWR +GVQQS GWVHY IH PEP
Sbjct: 5  QIYYSDKYFDEHYEYRHVMLPRELSKQVPKTQLMSEEEWRRLGVQQSLGWVHYMIHEPEP 64

Query: 63 HIMLFRRPLNYQQQQ 77
          HI+LFRRPL   QQ+
Sbjct: 65 HILLFRRPLPKDQQK 79


>gi|392340553|ref|XP_003754108.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1-like
          [Rattus norvegicus]
 gi|392348136|ref|XP_003750026.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1-like
          [Rattus norvegicus]
          Length = 79

 Score =  109 bits (272), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 59/69 (85%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY D+ +EYRHV+LP D+AKL+PK  L+ E+EWR +GVQQS+GWVHY IH PEP
Sbjct: 5  QIYYSDKYDDEEFEYRHVMLPKDIAKLVPKTHLMFESEWRNLGVQQSQGWVHYMIHEPEP 64

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 65 HILLFRRPL 73


>gi|256083539|ref|XP_002578000.1| hypothetical protein [Schistosoma mansoni]
 gi|353231659|emb|CCD79014.1| cyclin-dependent kinases regulatory subunit or 60S ribosome
          subunit biogenesis protein nip7-related [Schistosoma
          mansoni]
          Length = 95

 Score =  109 bits (272), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 51/78 (65%), Positives = 59/78 (75%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I YSEKY+DD YEYRHV LP D+AK +PKN L+SE EWR +G+QQS GWVHY IH PEPH
Sbjct: 5  IYYSEKYYDDIYEYRHVHLPKDLAKQVPKNHLMSEIEWRKLGIQQSAGWVHYMIHEPEPH 64

Query: 64 IMLFRRPLNYQQQQENQA 81
          I+LFRR     QQ  + A
Sbjct: 65 IILFRRSRTDIQQPTSTA 82


>gi|4502859|ref|NP_001818.1| cyclin-dependent kinases regulatory subunit 2 [Homo sapiens]
 gi|164519018|ref|NP_001106790.1| cyclin-dependent kinases regulatory subunit 2 [Bos taurus]
 gi|388596682|ref|NP_001254472.1| cyclin-dependent kinases regulatory subunit 2 [Macaca mulatta]
 gi|291383549|ref|XP_002708319.1| PREDICTED: CDC28 protein kinase 2 [Oryctolagus cuniculus]
 gi|296189374|ref|XP_002742757.1| PREDICTED: cyclin-dependent kinases regulatory subunit 2
          [Callithrix jacchus]
 gi|297684759|ref|XP_002819984.1| PREDICTED: cyclin-dependent kinases regulatory subunit 2 [Pongo
          abelii]
 gi|311270269|ref|XP_003132838.1| PREDICTED: cyclin-dependent kinases regulatory subunit 2-like
          [Sus scrofa]
 gi|332832272|ref|XP_003312208.1| PREDICTED: cyclin-dependent kinases regulatory subunit 2 isoform
          1 [Pan troglodytes]
 gi|344305873|ref|XP_003421614.1| PREDICTED: cyclin-dependent kinases regulatory subunit 2-like
          [Loxodonta africana]
 gi|395844642|ref|XP_003795066.1| PREDICTED: cyclin-dependent kinases regulatory subunit 2
          [Otolemur garnettii]
 gi|397469450|ref|XP_003806367.1| PREDICTED: cyclin-dependent kinases regulatory subunit 2 [Pan
          paniscus]
 gi|426362239|ref|XP_004048278.1| PREDICTED: cyclin-dependent kinases regulatory subunit 2 [Gorilla
          gorilla gorilla]
 gi|461747|sp|P33552.1|CKS2_HUMAN RecName: Full=Cyclin-dependent kinases regulatory subunit 2;
          Short=CKS-2
 gi|118572226|sp|Q2KJI1.1|CKS2_BOVIN RecName: Full=Cyclin-dependent kinases regulatory subunit 2;
          Short=CKS-2
 gi|996143|pdb|1CKS|A Chain A, Human Ckshs2 Atomic Structure: A Role For Its Hexameric
          Assembly In Cell Cycle Control
 gi|996144|pdb|1CKS|B Chain B, Human Ckshs2 Atomic Structure: A Role For Its Hexameric
          Assembly In Cell Cycle Control
 gi|996145|pdb|1CKS|C Chain C, Human Ckshs2 Atomic Structure: A Role For Its Hexameric
          Assembly In Cell Cycle Control
 gi|20454289|gb|AAM22232.1|AF506708_1 CDC28 protein kinase 2 [Homo sapiens]
 gi|29979|emb|CAA38703.1| Cks1 protein homologue [Homo sapiens]
 gi|13623665|gb|AAH06458.1| CDC28 protein kinase regulatory subunit 2 [Homo sapiens]
 gi|30582099|gb|AAP35276.1| CDC28 protein kinase regulatory subunit 2 [Homo sapiens]
 gi|49457232|emb|CAG46915.1| CKS2 [Homo sapiens]
 gi|60656055|gb|AAX32591.1| CDC28 protein kinase regulatory subunit 2 [synthetic construct]
 gi|60656057|gb|AAX32592.1| CDC28 protein kinase regulatory subunit 2 [synthetic construct]
 gi|86821130|gb|AAI05332.1| CDC28 protein kinase regulatory subunit 2 [Bos taurus]
 gi|119583166|gb|EAW62762.1| CDC28 protein kinase regulatory subunit 2 [Homo sapiens]
 gi|261859264|dbj|BAI46154.1| CDC28 protein kinase regulatory subunit 2 [synthetic construct]
 gi|296484447|tpg|DAA26562.1| TPA: cyclin-dependent kinases regulatory subunit 2 [Bos taurus]
 gi|384943192|gb|AFI35201.1| cyclin-dependent kinases regulatory subunit 2 [Macaca mulatta]
 gi|387541192|gb|AFJ71223.1| cyclin-dependent kinases regulatory subunit 2 [Macaca mulatta]
 gi|410208530|gb|JAA01484.1| CDC28 protein kinase regulatory subunit 2 [Pan troglodytes]
 gi|410264686|gb|JAA20309.1| CDC28 protein kinase regulatory subunit 2 [Pan troglodytes]
 gi|410288506|gb|JAA22853.1| CDC28 protein kinase regulatory subunit 2 [Pan troglodytes]
 gi|410328353|gb|JAA33123.1| CDC28 protein kinase regulatory subunit 2 [Pan troglodytes]
 gi|431892480|gb|ELK02917.1| Cyclin-dependent kinases regulatory subunit 2 [Pteropus alecto]
 gi|440896149|gb|ELR48163.1| Cyclin-dependent kinases regulatory subunit 2 [Bos grunniens
          mutus]
          Length = 79

 Score =  109 bits (272), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 50/75 (66%), Positives = 61/75 (81%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KYFD+ YEYRHV+LP +++K +PK  L+SE EWR +GVQQS GWVHY IH PEP
Sbjct: 5  QIYYSDKYFDEHYEYRHVMLPRELSKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEPEP 64

Query: 63 HIMLFRRPLNYQQQQ 77
          HI+LFRRPL   QQ+
Sbjct: 65 HILLFRRPLPKDQQK 79


>gi|358255818|dbj|GAA57459.1| cyclin-dependent kinase regulatory subunit CKS1 [Clonorchis
           sinensis]
          Length = 232

 Score =  109 bits (272), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 48/68 (70%), Positives = 57/68 (83%)

Query: 3   QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
            I YSEKY+DD +EYRHV LP ++AK +PKNRL+SE EWR +G+QQS GWVHY IH PEP
Sbjct: 142 NIYYSEKYYDDLHEYRHVHLPKEIAKKVPKNRLMSEYEWRELGIQQSAGWVHYMIHEPEP 201

Query: 63  HIMLFRRP 70
           HI+LFRRP
Sbjct: 202 HIILFRRP 209


>gi|444729708|gb|ELW70115.1| Cyclin-dependent kinases regulatory subunit 1 [Tupaia chinensis]
          Length = 79

 Score =  109 bits (272), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 60/69 (86%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI +S+KY D+ +EYRHV+LP D+AKL+PK  L+SE+EWR +GVQQS+GWVHY +H PEP
Sbjct: 5  QIYHSDKYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMLHEPEP 64

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 65 HILLFRRPL 73


>gi|332265188|ref|XP_003281610.1| PREDICTED: cyclin-dependent kinases regulatory subunit 2
          [Nomascus leucogenys]
          Length = 79

 Score =  109 bits (272), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 50/75 (66%), Positives = 61/75 (81%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KYFD+ YEYRHV+LP +++K +PK  L+SE EWR +GVQQS GWVHY IH PEP
Sbjct: 5  QIYYSDKYFDEYYEYRHVMLPRELSKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEPEP 64

Query: 63 HIMLFRRPLNYQQQQ 77
          HI+LFRRPL   QQ+
Sbjct: 65 HILLFRRPLPKDQQK 79


>gi|242015119|ref|XP_002428221.1| Cyclin-dependent kinases regulatory subunit, putative [Pediculus
          humanus corporis]
 gi|212512782|gb|EEB15483.1| Cyclin-dependent kinases regulatory subunit, putative [Pediculus
          humanus corporis]
          Length = 80

 Score =  109 bits (272), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 45/74 (60%), Positives = 62/74 (83%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          +  YS KY+DD YEYRHVVLP ++AKL+PK+ L+SE EWR IG++QS+GW+HY +H+PEP
Sbjct: 5  EFYYSPKYYDDKYEYRHVVLPKELAKLVPKSHLMSEREWRDIGIKQSQGWIHYMVHKPEP 64

Query: 63 HIMLFRRPLNYQQQ 76
          HI+LF+RP+  Q +
Sbjct: 65 HILLFKRPITSQPE 78


>gi|383850359|ref|XP_003700763.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1-like
          [Megachile rotundata]
          Length = 101

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 48/70 (68%), Positives = 58/70 (82%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          + QIQYS KY DD YEYRHV+LP D+A+ +PK  L+SETEWR +GVQQS GWVHY +H P
Sbjct: 3  VDQIQYSGKYNDDKYEYRHVILPADLARHVPKTHLMSETEWRNLGVQQSPGWVHYMMHVP 62

Query: 61 EPHIMLFRRP 70
          EPH++LFRRP
Sbjct: 63 EPHVLLFRRP 72


>gi|355701008|gb|EHH29029.1| hypothetical protein EGK_09339 [Macaca mulatta]
 gi|355754713|gb|EHH58614.1| hypothetical protein EGM_08503 [Macaca fascicularis]
          Length = 79

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 59/69 (85%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY D+ +EYRHV+LP D+AKL+PK  L+SE+EWR +GVQQS+GWVHY I  PEP
Sbjct: 5  QIYYSDKYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIQEPEP 64

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 65 HILLFRRPL 73


>gi|427781565|gb|JAA56234.1| Putative cyclin-dependent kinase regulatory subunit subunit
          [Rhipicephalus pulchellus]
          Length = 76

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 44/68 (64%), Positives = 60/68 (88%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          +QYS+KY+D+ YEYRHV+LPP++A+ +PKN L++ETEWR +GVQQS GW HY +H PEPH
Sbjct: 6  VQYSDKYYDNKYEYRHVILPPEMAQSVPKNHLMTETEWRNLGVQQSLGWEHYMLHLPEPH 65

Query: 64 IMLFRRPL 71
          ++LFRRP+
Sbjct: 66 VLLFRRPI 73


>gi|417407580|gb|JAA50394.1| Putative cyclin-dependent kinase regulatory subunit 2, partial
          [Desmodus rotundus]
          Length = 89

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 50/75 (66%), Positives = 61/75 (81%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KYFD+ YEYRHV+LP +++K +PK  L+SE EWR +GVQQS GWVHY IH PEP
Sbjct: 15 QIYYSDKYFDEHYEYRHVMLPRELSKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEPEP 74

Query: 63 HIMLFRRPLNYQQQQ 77
          HI+LFRRPL   QQ+
Sbjct: 75 HILLFRRPLPKDQQK 89


>gi|340501505|gb|EGR28283.1| hypothetical protein IMG5_179400 [Ichthyophthirius multifiliis]
          Length = 92

 Score =  108 bits (271), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 48/74 (64%), Positives = 60/74 (81%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          +I+YS+KY D+ YEYRHV+LP  + K +PK RLL E EWR++GVQQSRGW+HY IH+PEP
Sbjct: 7  EIEYSDKYSDEYYEYRHVILPKALFKKIPKGRLLDELEWRSLGVQQSRGWIHYEIHKPEP 66

Query: 63 HIMLFRRPLNYQQQ 76
          HI+LFRRPL    Q
Sbjct: 67 HILLFRRPLGTDLQ 80


>gi|410921434|ref|XP_003974188.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1-like
          [Takifugu rubripes]
          Length = 76

 Score =  108 bits (271), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 61/70 (87%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY D+ +EYRHVVLP +++KL+P + L+SE EWR +GVQQS+GW+HY IH+PEP
Sbjct: 5  QIYYSDKYNDEEFEYRHVVLPKELSKLVPSSHLMSEDEWRGLGVQQSQGWMHYMIHKPEP 64

Query: 63 HIMLFRRPLN 72
          HI+LFRRPL+
Sbjct: 65 HILLFRRPLS 74


>gi|27803876|gb|AAO22151.1| cyclin-dependent kinase regulatory subunit [Trypanosoma cruzi]
          Length = 98

 Score =  108 bits (271), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 58/69 (84%)

Query: 2  GQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPE 61
           +I YSEKY+DD YEYRHVVLP D A+L+P++RL+ E+EWR +GVQQS GW HY  H+PE
Sbjct: 27 SKILYSEKYYDDEYEYRHVVLPKDFARLVPRHRLMDESEWRQLGVQQSVGWRHYMFHKPE 86

Query: 62 PHIMLFRRP 70
          PH++LF+RP
Sbjct: 87 PHVLLFKRP 95


>gi|18158610|gb|AAK91295.2|AF395863_1 CDC28 protein kinase 1-like protein [Branchiostoma belcheri]
          Length = 79

 Score =  108 bits (271), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 46/68 (67%), Positives = 58/68 (85%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
           I YS+KY+DD +EYRHV+LP ++AKL+PK+ L+SE+EWR IGVQQS+GW HY  H PEP
Sbjct: 5  HIYYSDKYYDDKFEYRHVMLPKELAKLVPKSHLMSESEWRGIGVQQSQGWCHYMKHEPEP 64

Query: 63 HIMLFRRP 70
          HI+LFRRP
Sbjct: 65 HILLFRRP 72


>gi|397646290|gb|EJK77207.1| hypothetical protein THAOC_00974 [Thalassiosira oceanica]
          Length = 116

 Score =  108 bits (271), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 54/87 (62%), Positives = 62/87 (71%), Gaps = 13/87 (14%)

Query: 3  QIQYSEKYFDDTYEYR-------------HVVLPPDVAKLLPKNRLLSETEWRAIGVQQS 49
          +I+YSEKY D+  EYR             HV+LP ++AK LPK RLLSE EWR+IGVQQS
Sbjct: 5  RIEYSEKYADEENEYRWVGPVWRLLCAGPHVILPKELAKTLPKTRLLSENEWRSIGVQQS 64

Query: 50 RGWVHYAIHRPEPHIMLFRRPLNYQQQ 76
          RGW HYAIHRPEPHI+LFRRPL    Q
Sbjct: 65 RGWQHYAIHRPEPHILLFRRPLGTDPQ 91


>gi|71654242|ref|XP_815745.1| cyclin-dependent kinases regulatory subunit [Trypanosoma cruzi
          strain CL Brener]
 gi|70880821|gb|EAN93894.1| cyclin-dependent kinases regulatory subunit, putative
          [Trypanosoma cruzi]
          Length = 98

 Score =  108 bits (271), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 58/69 (84%)

Query: 2  GQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPE 61
           +I YSEKY+DD YEYRHVVLP D A+L+P++RL+ E+EWR +GVQQS GW HY  H+PE
Sbjct: 27 SKILYSEKYYDDEYEYRHVVLPKDFARLVPRHRLMDESEWRQLGVQQSVGWRHYMFHKPE 86

Query: 62 PHIMLFRRP 70
          PH++LF+RP
Sbjct: 87 PHVLLFKRP 95


>gi|348504648|ref|XP_003439873.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1-like
          [Oreochromis niloticus]
          Length = 76

 Score =  108 bits (271), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 59/69 (85%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY DD +EYRHVVLP  ++KL+P + L++E EWR +GVQQS+GW+HY IH+PEP
Sbjct: 5  QIFYSDKYTDDDFEYRHVVLPKQLSKLVPSSHLMTEEEWRGLGVQQSQGWIHYMIHKPEP 64

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 65 HILLFRRPL 73


>gi|109009542|ref|XP_001109081.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1-like
          [Macaca mulatta]
          Length = 79

 Score =  108 bits (271), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 59/69 (85%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY D+ +EYRHV+LP D+AKL+PK  L+SE+EWR +GVQQS+GWV Y IH PEP
Sbjct: 5  QIYYSDKYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVRYMIHEPEP 64

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 65 HILLFRRPL 73


>gi|340714002|ref|XP_003395522.1| PREDICTED: cyclin-dependent kinases regulatory subunit-like
          [Bombus terrestris]
 gi|350418881|ref|XP_003491999.1| PREDICTED: cyclin-dependent kinases regulatory subunit-like
          [Bombus impatiens]
          Length = 79

 Score =  108 bits (270), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 47/71 (66%), Positives = 59/71 (83%)

Query: 2  GQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPE 61
           ++ YS+KY+DD YEYRHVVLP ++ KL+P   LLSE EWRAIGVQQS+GWVHY IH+PE
Sbjct: 3  NKMYYSDKYYDDKYEYRHVVLPKEMIKLVPTTHLLSEQEWRAIGVQQSQGWVHYMIHKPE 62

Query: 62 PHIMLFRRPLN 72
          PHI+LF+R + 
Sbjct: 63 PHILLFKRKIT 73


>gi|269146684|gb|ACZ28288.1| cyclin-dependent protein kinase regulator [Simulium nigrimanum]
          Length = 89

 Score =  108 bits (270), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 47/68 (69%), Positives = 58/68 (85%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QIQYSEKY +D +E+RHV+LPPD+AK +PK  L++ETEWR +GVQQS GW+HY IH PE 
Sbjct: 5  QIQYSEKYNNDEFEFRHVILPPDLAKNVPKTHLMTETEWRNLGVQQSPGWIHYMIHAPEQ 64

Query: 63 HIMLFRRP 70
          HI+LFRRP
Sbjct: 65 HILLFRRP 72


>gi|121543867|gb|ABM55598.1| cyclin-dependent kinase subunit-like protein [Maconellicoccus
          hirsutus]
          Length = 74

 Score =  108 bits (270), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 57/69 (82%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          +  YS KY+DD YEYRHVVLP ++A+L+ K  L+SE EWRAIGVQ S GW+HY IHRPEP
Sbjct: 4  EFYYSPKYYDDKYEYRHVVLPKEIARLVSKTELMSEAEWRAIGVQMSPGWIHYMIHRPEP 63

Query: 63 HIMLFRRPL 71
          HI+LF+RP+
Sbjct: 64 HILLFKRPI 72


>gi|332372907|gb|AEE61595.1| unknown [Dendroctonus ponderosae]
          Length = 82

 Score =  108 bits (270), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 47/70 (67%), Positives = 59/70 (84%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
           IQYSEKY D+ YEYRHV+LP D+AKL+P+  L++ETEWR +GVQQS  WVHY +H PEP
Sbjct: 5  NIQYSEKYTDEKYEYRHVILPADLAKLVPRPHLMTETEWRNLGVQQSPNWVHYMLHSPEP 64

Query: 63 HIMLFRRPLN 72
          H++LFRRPL+
Sbjct: 65 HVLLFRRPLH 74


>gi|195444686|ref|XP_002069981.1| GK11278 [Drosophila willistoni]
 gi|194166066|gb|EDW80967.1| GK11278 [Drosophila willistoni]
          Length = 99

 Score =  108 bits (270), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 58/67 (86%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QIQYSEKY+D+ +EYRHV+LP D+AK +PK  L++ETEWR +GVQQS GWVHY +H PEP
Sbjct: 5  QIQYSEKYYDEKFEYRHVILPADLAKHVPKAHLMTETEWRNLGVQQSPGWVHYMMHAPEP 64

Query: 63 HIMLFRR 69
          H++LFRR
Sbjct: 65 HVILFRR 71


>gi|113678784|ref|NP_001038434.1| cyclin-dependent kinases regulatory subunit 1 [Danio rerio]
          Length = 78

 Score =  108 bits (270), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 59/69 (85%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY D+ YEYRHV+LP  ++KL+P + L+SE EWR +GVQQS+GW+HY IH+PEP
Sbjct: 7  QIYYSDKYSDEEYEYRHVMLPKQLSKLVPSSHLMSEEEWRGLGVQQSQGWIHYMIHKPEP 66

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 67 HILLFRRPL 75


>gi|71398320|ref|XP_802576.1| cyclin-dependent kinases regulatory subunit [Trypanosoma cruzi
          strain CL Brener]
 gi|70863983|gb|EAN81130.1| cyclin-dependent kinases regulatory subunit, putative
          [Trypanosoma cruzi]
          Length = 78

 Score =  108 bits (270), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 58/69 (84%)

Query: 2  GQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPE 61
           +I YSEKY+DD YEYRHVVLP D A+L+P++RL+ E+EWR +GVQQS GW HY  H+PE
Sbjct: 7  SKILYSEKYYDDEYEYRHVVLPKDFARLVPRHRLMDESEWRQLGVQQSVGWRHYMFHKPE 66

Query: 62 PHIMLFRRP 70
          PH++LF+RP
Sbjct: 67 PHVLLFKRP 75


>gi|163914375|ref|NP_001106274.1| CDC28 protein kinase regulatory subunit 2 [Xenopus laevis]
 gi|126631304|gb|AAI33805.1| Cks2b protein [Xenopus laevis]
          Length = 79

 Score =  108 bits (270), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 50/74 (67%), Positives = 60/74 (81%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I YS+KY D+ YEYRHVVLP ++AK +PK  L+SE EWR +GVQQS GWVHY IH PEPH
Sbjct: 6  IYYSDKYTDEHYEYRHVVLPKELAKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEPEPH 65

Query: 64 IMLFRRPLNYQQQQ 77
          I+LFRRPL  +QQ+
Sbjct: 66 ILLFRRPLPKEQQK 79


>gi|348528091|ref|XP_003451552.1| PREDICTED: cyclin-dependent kinases regulatory subunit 2-like
          [Oreochromis niloticus]
          Length = 77

 Score =  108 bits (270), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 48/70 (68%), Positives = 59/70 (84%)

Query: 2  GQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPE 61
           QI YS++Y DD YEYRHVVLP ++AK +PK+ L+SE EWR +GVQQS+GW+HY IH PE
Sbjct: 4  NQIYYSDRYSDDHYEYRHVVLPREMAKYIPKSHLMSEEEWRQLGVQQSQGWIHYMIHEPE 63

Query: 62 PHIMLFRRPL 71
          PHI+LFRRPL
Sbjct: 64 PHILLFRRPL 73


>gi|91087377|ref|XP_975644.1| PREDICTED: similar to CDC28 protein kinase 1-like protein
          [Tribolium castaneum]
          Length = 89

 Score =  108 bits (269), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 57/69 (82%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I YS+KY+D+ YEYRHVVLP ++ K++PK  L+SE EWR IGVQQS+GWVHY  H PEPH
Sbjct: 13 IYYSDKYYDEEYEYRHVVLPKEMVKMVPKTHLMSEDEWRGIGVQQSKGWVHYMTHSPEPH 72

Query: 64 IMLFRRPLN 72
          I+LF+RP+ 
Sbjct: 73 ILLFKRPIT 81


>gi|126335317|ref|XP_001366039.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1-like
          [Monodelphis domestica]
          Length = 78

 Score =  108 bits (269), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 60/69 (86%), Gaps = 1/69 (1%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY D+ +EYRHV+LP D+AKL+PK  L+SE+EWR +GVQQS+GWVHY IH PEP
Sbjct: 5  QIYYSDKY-DEEFEYRHVMLPKDIAKLVPKTHLISESEWRNLGVQQSQGWVHYMIHEPEP 63

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 64 HILLFRRPL 72


>gi|346471465|gb|AEO35577.1| hypothetical protein [Amblyomma maculatum]
          Length = 83

 Score =  108 bits (269), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 44/68 (64%), Positives = 57/68 (83%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
           I YS+KY+DD YEYRHV+LPP++A+ +PK  L++ETEWR +GVQQS GW HY +H PEP
Sbjct: 12 SIHYSDKYYDDKYEYRHVILPPEMAQSVPKTHLMTETEWRNLGVQQSLGWEHYMVHSPEP 71

Query: 63 HIMLFRRP 70
          H++LFRRP
Sbjct: 72 HVLLFRRP 79


>gi|213515540|ref|NP_001134910.1| Cyclin-dependent kinases regulatory subunit 1 [Salmo salar]
 gi|209737086|gb|ACI69412.1| Cyclin-dependent kinases regulatory subunit 1 [Salmo salar]
          Length = 76

 Score =  108 bits (269), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 59/69 (85%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY D+ +EYRHV+LP D+AK +PK  L+S TEWR +GVQQS+GW+HY IH+PEP
Sbjct: 5  QIYYSDKYDDEKFEYRHVMLPKDIAKRVPKTHLMSGTEWRNLGVQQSQGWIHYMIHQPEP 64

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 65 HILLFRRPL 73


>gi|403361088|gb|EJY80241.1| Cyclin-dependent kinase regulatory subunit family protein
          [Oxytricha trifallax]
          Length = 100

 Score =  108 bits (269), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 47/68 (69%), Positives = 59/68 (86%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          +I+YSEKY DD+YEYRHV+LP  V K + + RLL+ETEWR++GVQQSRGWVHY +H+PEP
Sbjct: 7  EIEYSEKYEDDSYEYRHVLLPKHVFKKMARGRLLTETEWRSLGVQQSRGWVHYEVHKPEP 66

Query: 63 HIMLFRRP 70
           I+LFRRP
Sbjct: 67 FILLFRRP 74


>gi|340500617|gb|EGR27482.1| hypothetical protein IMG5_195290 [Ichthyophthirius multifiliis]
          Length = 92

 Score =  108 bits (269), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 48/74 (64%), Positives = 60/74 (81%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          +I+YS+KY D+ YEYRHV+LP  + K +PK RLL E EWR++GVQQSRGWVHY +H+PEP
Sbjct: 7  EIEYSDKYQDEYYEYRHVILPKALFKKIPKGRLLEEMEWRSLGVQQSRGWVHYEVHKPEP 66

Query: 63 HIMLFRRPLNYQQQ 76
          HI+LFRRPL    Q
Sbjct: 67 HILLFRRPLGTDLQ 80


>gi|91081507|ref|XP_974605.1| PREDICTED: similar to Cyclin-dependent kinase subunit 85A
          CG9790-PA [Tribolium castaneum]
 gi|270006152|gb|EFA02600.1| hypothetical protein TcasGA2_TC008319 [Tribolium castaneum]
          Length = 81

 Score =  108 bits (269), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 47/72 (65%), Positives = 59/72 (81%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          +  I YSEKY D+ YEYRHV+LP D+AKL+P+  L++ETEWR +GVQQS  WVHY +H P
Sbjct: 3  VNNILYSEKYSDEHYEYRHVILPADLAKLVPRAHLMTETEWRNLGVQQSPNWVHYMLHTP 62

Query: 61 EPHIMLFRRPLN 72
          EPHI+LFRRPL+
Sbjct: 63 EPHILLFRRPLS 74


>gi|47225594|emb|CAG07937.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 75

 Score =  107 bits (268), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 60/70 (85%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY D+ +EYRHVVLP +++KL+P + L+SE EWR +GVQQS+GW+HY IH PEP
Sbjct: 5  QIYYSDKYNDEEFEYRHVVLPKELSKLVPSSHLMSEDEWRGLGVQQSQGWMHYMIHNPEP 64

Query: 63 HIMLFRRPLN 72
          HI+LFRRPL+
Sbjct: 65 HILLFRRPLS 74


>gi|332021134|gb|EGI61521.1| Cyclin-dependent kinases regulatory subunit 1 [Acromyrmex
          echinatior]
          Length = 94

 Score =  107 bits (268), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 58/69 (84%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          + QIQYSEKY DD YEYRHV+LP D+A+ +PK  L++ETEWR +GVQQS GWVHY +H P
Sbjct: 3  VDQIQYSEKYNDDRYEYRHVILPVDIARHVPKTHLMTETEWRNLGVQQSPGWVHYMMHGP 62

Query: 61 EPHIMLFRR 69
          EPH++LFRR
Sbjct: 63 EPHVLLFRR 71


>gi|62859187|ref|NP_001016170.1| CDC28 protein kinase regulatory subunit 2 [Xenopus (Silurana)
          tropicalis]
 gi|213624042|gb|AAI70572.1| CDC28 protein kinase regulatory subunit 2 [Xenopus (Silurana)
          tropicalis]
 gi|213625418|gb|AAI70574.1| CDC28 protein kinase regulatory subunit 2 [Xenopus (Silurana)
          tropicalis]
          Length = 79

 Score =  107 bits (268), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 49/74 (66%), Positives = 60/74 (81%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I YS+KY D+ YEYRHV+LP ++AK +PK  L+SE EWR +GVQQS GWVHY IH PEPH
Sbjct: 6  IYYSDKYSDENYEYRHVMLPKELAKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEPEPH 65

Query: 64 IMLFRRPLNYQQQQ 77
          I+LFRRPL  +QQ+
Sbjct: 66 ILLFRRPLPKEQQK 79


>gi|383849447|ref|XP_003700356.1| PREDICTED: cyclin-dependent kinases regulatory subunit-like
          [Megachile rotundata]
          Length = 79

 Score =  107 bits (268), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 47/70 (67%), Positives = 58/70 (82%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          +I YS KY+DD YEYRHVVLP ++ KL+P  RLL E EWRA+GVQQS+GWVHY IH+PEP
Sbjct: 4  KIYYSGKYYDDKYEYRHVVLPKEMVKLVPSTRLLREQEWRAMGVQQSQGWVHYMIHKPEP 63

Query: 63 HIMLFRRPLN 72
          HI+LF+R + 
Sbjct: 64 HILLFKRKIT 73


>gi|268570521|ref|XP_002640765.1| C. briggsae CBR-CKS-1 protein [Caenorhabditis briggsae]
 gi|212288172|sp|A8XMF2.1|CKS1_CAEBR RecName: Full=Cyclin-dependent kinases regulatory subunit
          Length = 94

 Score =  107 bits (268), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 48/71 (67%), Positives = 58/71 (81%)

Query: 6  YSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHIM 65
          YS KY DD YEYRHV +  DVAKL+PKNRL+SETEWR++G+QQS GW+HY IH PE H++
Sbjct: 10 YSNKYEDDEYEYRHVHVTKDVAKLIPKNRLMSETEWRSLGIQQSPGWIHYMIHGPERHVL 69

Query: 66 LFRRPLNYQQQ 76
          LFRRPL   Q+
Sbjct: 70 LFRRPLPNAQK 80


>gi|341890563|gb|EGT46498.1| hypothetical protein CAEBREN_11071 [Caenorhabditis brenneri]
 gi|341902694|gb|EGT58629.1| hypothetical protein CAEBREN_08648 [Caenorhabditis brenneri]
          Length = 98

 Score =  107 bits (268), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 46/66 (69%), Positives = 56/66 (84%)

Query: 6  YSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHIM 65
          YS KY DD +EYRHV +  DVAKL+PKNRL+SETEWR++G+QQS GW+HY IH PE H++
Sbjct: 10 YSNKYEDDEFEYRHVHVTKDVAKLIPKNRLMSETEWRSLGIQQSPGWIHYMIHGPERHVL 69

Query: 66 LFRRPL 71
          LFRRPL
Sbjct: 70 LFRRPL 75


>gi|324520526|gb|ADY47656.1| Cyclin-dependent kinases regulatory subunit [Ascaris suum]
          Length = 94

 Score =  107 bits (268), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 47/82 (57%), Positives = 61/82 (74%)

Query: 6  YSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHIM 65
          YS KY DD YEYRHV +  +VAKL+PKNRL++E+EWR++G+QQS GWVHY IH PE H++
Sbjct: 10 YSNKYQDDEYEYRHVHVTKEVAKLIPKNRLMTESEWRSLGIQQSPGWVHYMIHGPERHVL 69

Query: 66 LFRRPLNYQQQQENQAQQNILA 87
          LFRRPL  +     Q   N++ 
Sbjct: 70 LFRRPLPKKNNTATQKGSNVVG 91


>gi|357616500|gb|EHJ70227.1| putative CDC28 protein kinase 1-like protein [Danaus plexippus]
          Length = 79

 Score =  107 bits (267), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 47/66 (71%), Positives = 57/66 (86%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I YSEKY+D+ +EYRHVVLP ++ KL+PKN L+SE EWR IGVQQS+GWVHY  H+PEPH
Sbjct: 5  IYYSEKYYDEEHEYRHVVLPKEMVKLVPKNHLMSEQEWRGIGVQQSQGWVHYMTHQPEPH 64

Query: 64 IMLFRR 69
          I+LFRR
Sbjct: 65 ILLFRR 70


>gi|405964344|gb|EKC29841.1| Cyclin-dependent kinases regulatory subunit 1 [Crassostrea gigas]
          Length = 87

 Score =  107 bits (267), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 49/77 (63%), Positives = 62/77 (80%), Gaps = 1/77 (1%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I YS+KY DD YEYRHV+LP ++AKL+P ++L+SE EWR +GVQQS+GW+HY  H PEPH
Sbjct: 6  IYYSDKYTDDQYEYRHVMLPKEIAKLVP-SKLMSEAEWRGLGVQQSQGWIHYMKHDPEPH 64

Query: 64 IMLFRRPLNYQQQQENQ 80
          I+LFRRPL    QQ +Q
Sbjct: 65 ILLFRRPLPCHNQQTHQ 81


>gi|291225626|ref|XP_002732788.1| PREDICTED: CDC28 protein kinase 1B-like [Saccoglossus
          kowalevskii]
          Length = 77

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 56/67 (83%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
           I YS+KYFD+ +EYRHV+LP D+AKL+P + L+SE EWR IGVQQS+GW+HY  H PEP
Sbjct: 5  HIYYSDKYFDEKFEYRHVMLPKDIAKLVPDSHLMSEAEWRGIGVQQSQGWIHYMKHSPEP 64

Query: 63 HIMLFRR 69
          HI+LFRR
Sbjct: 65 HILLFRR 71


>gi|284448134|ref|NP_001165208.1| CDC28 protein kinase regulatory subunit 1B [Xenopus laevis]
 gi|126631756|gb|AAI33267.1| LOC100049098 protein [Xenopus laevis]
          Length = 78

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 48/68 (70%), Positives = 57/68 (83%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I YS+KY D+ YEYRHV+LP D+AK +PK  L+SETEWR +GVQQS+GWVHY IH PEPH
Sbjct: 6  IYYSDKYDDELYEYRHVMLPKDIAKQVPKTHLMSETEWRNLGVQQSQGWVHYMIHEPEPH 65

Query: 64 IMLFRRPL 71
          I+LFRR L
Sbjct: 66 ILLFRRSL 73


>gi|118104196|ref|XP_001231967.1| PREDICTED: uncharacterized protein LOC768830 [Gallus gallus]
          Length = 79

 Score =  107 bits (266), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 49/74 (66%), Positives = 59/74 (79%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I YS+KYFD+ YEYRHV+LP ++ K +PK  LLSE EWR++GVQQS GWVHY IH PEPH
Sbjct: 6  IYYSDKYFDEQYEYRHVMLPRELLKRMPKAHLLSEEEWRSLGVQQSLGWVHYMIHEPEPH 65

Query: 64 IMLFRRPLNYQQQQ 77
          I+LFRRPL    Q+
Sbjct: 66 ILLFRRPLPKDDQK 79


>gi|403364962|gb|EJY82255.1| Regulatory subunit of cyclin-dependent kinase [Oxytricha
          trifallax]
          Length = 89

 Score =  107 bits (266), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 49/78 (62%), Positives = 60/78 (76%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI+YSEKY DDTYEYRHV LP +V   L ++ LL+E EWR +G+Q S GW HY I +PEP
Sbjct: 8  QIEYSEKYNDDTYEYRHVTLPENVFANLKRDVLLTEDEWRTLGLQMSTGWEHYLIFKPEP 67

Query: 63 HIMLFRRPLNYQQQQENQ 80
           +MLFRRPLNYQ +Q +Q
Sbjct: 68 FVMLFRRPLNYQFKQNHQ 85


>gi|148682329|gb|EDL14276.1| mCG1026411 [Mus musculus]
          Length = 79

 Score =  107 bits (266), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 49/75 (65%), Positives = 61/75 (81%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KYFD+ YEYRHV+LP +++K +PK  L+SE EWR +GVQQS GWVHY IH PE 
Sbjct: 5  QIYYSDKYFDEHYEYRHVMLPRELSKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEPEQ 64

Query: 63 HIMLFRRPLNYQQQQ 77
          HI+LFRRPL  +QQ+
Sbjct: 65 HILLFRRPLPKEQQK 79


>gi|198411926|ref|XP_002127051.1| PREDICTED: similar to suc1 homologue [Ciona intestinalis]
          Length = 81

 Score =  107 bits (266), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 45/68 (66%), Positives = 58/68 (85%)

Query: 2  GQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPE 61
            I YS+KYFDD YEYRHV+LP +++KL+PK+ L+SE EWR++GVQQS+GW+HY  H PE
Sbjct: 4  NDIYYSDKYFDDRYEYRHVMLPRELSKLVPKSHLMSEAEWRSLGVQQSQGWIHYMKHEPE 63

Query: 62 PHIMLFRR 69
          PHI+LFRR
Sbjct: 64 PHILLFRR 71


>gi|47115197|emb|CAG28558.1| CKS2 [Homo sapiens]
          Length = 79

 Score =  106 bits (265), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/75 (65%), Positives = 60/75 (80%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KYFD+ YEY HV+LP +++K +PK  L+SE EWR +GVQQS GWVHY IH PEP
Sbjct: 5  QIYYSDKYFDEHYEYLHVMLPRELSKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEPEP 64

Query: 63 HIMLFRRPLNYQQQQ 77
          HI+LFRRPL   QQ+
Sbjct: 65 HILLFRRPLPKDQQK 79


>gi|124088217|ref|XP_001347010.1| Cyclin dependent kinase regulatory subunit [Paramecium
          tetraurelia strain d4-2]
 gi|145474553|ref|XP_001423299.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|50057399|emb|CAH03383.1| Cyclin dependent kinase regulatory subunit, putative [Paramecium
          tetraurelia]
 gi|124390359|emb|CAK55901.1| unnamed protein product [Paramecium tetraurelia]
          Length = 92

 Score =  106 bits (265), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 47/70 (67%), Positives = 57/70 (81%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          +I+YS+KY DD YEYRHV+LP  + K + K +LL+E EWRA+GVQQSRGW HY  HRPEP
Sbjct: 7  EIEYSDKYLDDYYEYRHVILPKHIFKKITKGKLLNEMEWRALGVQQSRGWSHYETHRPEP 66

Query: 63 HIMLFRRPLN 72
          HI+LFRRP N
Sbjct: 67 HILLFRRPKN 76


>gi|403296888|ref|XP_003939325.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1-like
          [Saimiri boliviensis boliviensis]
          Length = 79

 Score =  106 bits (265), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 59/69 (85%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY D+ +EYRHV+LP D+AKL+PK  L+SE+EWR +GVQQ++GWVHY IH PEP
Sbjct: 5  QIYYSDKYNDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQNQGWVHYMIHEPEP 64

Query: 63 HIMLFRRPL 71
          HI+LF+ PL
Sbjct: 65 HILLFQCPL 73


>gi|308485204|ref|XP_003104801.1| hypothetical protein CRE_23919 [Caenorhabditis remanei]
 gi|308257499|gb|EFP01452.1| hypothetical protein CRE_23919 [Caenorhabditis remanei]
          Length = 106

 Score =  106 bits (265), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 47/86 (54%), Positives = 64/86 (74%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          M  I YS +Y DD YEYRHV+LP D+AK +P+++LL+E EWR +GV QS GW HY IH P
Sbjct: 1  MDDIYYSPRYEDDQYEYRHVILPNDLAKQIPRDKLLTEGEWRRLGVTQSLGWEHYMIHNP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQNIL 86
          E HI+LFRR  N+ ++ E +A++ +L
Sbjct: 61 EKHILLFRRQRNFTKEDEERAKERLL 86


>gi|229367972|gb|ACQ58966.1| Cyclin-dependent kinases regulatory subunit 1 [Anoplopoma
          fimbria]
          Length = 76

 Score =  106 bits (265), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 59/69 (85%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY D+ +EYRHVVLP  ++KL+P + L++E EWR +GVQQS+GW+HY IH+PEP
Sbjct: 5  QIYYSDKYNDEEFEYRHVVLPKQLSKLVPSSHLMTEDEWRGLGVQQSQGWIHYMIHKPEP 64

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 65 HILLFRRPL 73


>gi|109120820|ref|XP_001106751.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1-like
          [Macaca mulatta]
          Length = 79

 Score =  106 bits (265), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 58/69 (84%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI Y +KY D+ +EYRHV+LP D+AKL+PK  L+SE+EWR +GVQQS+GWVHY I  PEP
Sbjct: 5  QIYYLDKYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIQEPEP 64

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 65 HILLFRRPL 73


>gi|221219544|gb|ACM08433.1| Cyclin-dependent kinases regulatory subunit 1 [Salmo salar]
 gi|221219678|gb|ACM08500.1| Cyclin-dependent kinases regulatory subunit 1 [Salmo salar]
 gi|221221464|gb|ACM09393.1| Cyclin-dependent kinases regulatory subunit 1 [Salmo salar]
          Length = 76

 Score =  106 bits (265), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 44/69 (63%), Positives = 59/69 (85%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY D+ +EYRHV+LP  ++KL+P + L++E EWR +GVQQS+GW+HY IH+PEP
Sbjct: 5  QIYYSDKYTDEAFEYRHVMLPKQLSKLVPTSHLMTEDEWRGLGVQQSQGWIHYMIHKPEP 64

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 65 HILLFRRPL 73


>gi|156364737|ref|XP_001626502.1| predicted protein [Nematostella vectensis]
 gi|156213380|gb|EDO34402.1| predicted protein [Nematostella vectensis]
          Length = 83

 Score =  106 bits (265), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 58/69 (84%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          + QI YSEKYFD  YEYRHV++P D+AKL+P+ +L++E+EWR IG+QQS+GW HY  H P
Sbjct: 4  IDQIYYSEKYFDSQYEYRHVMVPKDIAKLVPRKKLMTESEWRQIGIQQSQGWQHYMHHHP 63

Query: 61 EPHIMLFRR 69
          EPHI+LFRR
Sbjct: 64 EPHIILFRR 72


>gi|221091527|ref|XP_002166556.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1-like
          [Hydra magnipapillata]
          Length = 76

 Score =  106 bits (265), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 48/72 (66%), Positives = 57/72 (79%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          M QI YSEKY DD YEYRHV+LP ++ + +PK RLLSE EWR +GV QSRGW+HY  H P
Sbjct: 1  MSQIFYSEKYSDDEYEYRHVLLPKELLRHMPKQRLLSEDEWRKLGVTQSRGWIHYLHHAP 60

Query: 61 EPHIMLFRRPLN 72
          EP I+LFRRPL+
Sbjct: 61 EPQILLFRRPLS 72


>gi|326427272|gb|EGD72842.1| CDC28 protein kinase regulatory subunit 1B [Salpingoeca sp. ATCC
          50818]
          Length = 76

 Score =  106 bits (264), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 59/69 (85%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          +I YS KY+D+T+EYRHV LP ++   +P++RL++ETEWR +GVQQSRGW+HY IHRPEP
Sbjct: 4  KIAYSNKYYDETHEYRHVFLPKELVGQVPQDRLMTETEWRNLGVQQSRGWIHYMIHRPEP 63

Query: 63 HIMLFRRPL 71
          HI+LFRR L
Sbjct: 64 HILLFRRKL 72


>gi|326935140|ref|XP_003213636.1| PREDICTED: cyclin-dependent kinases regulatory subunit 2-like
          [Meleagris gallopavo]
          Length = 79

 Score =  106 bits (264), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 48/68 (70%), Positives = 57/68 (83%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I YS+KYFD+ YEYRHV+LP ++ K +PK  LLSE EWR++GVQQS GWVHY IH PEPH
Sbjct: 6  IYYSDKYFDEQYEYRHVMLPRELLKRMPKAHLLSEEEWRSLGVQQSLGWVHYMIHEPEPH 65

Query: 64 IMLFRRPL 71
          I+LFRRPL
Sbjct: 66 ILLFRRPL 73


>gi|17539564|ref|NP_501457.1| Protein CKS-1 [Caenorhabditis elegans]
 gi|2493730|sp|Q17868.1|CKS1_CAEEL RecName: Full=Cyclin-dependent kinases regulatory subunit
 gi|2407072|gb|AAC27123.1| cyclin kinase subunit [Caenorhabditis elegans]
 gi|351049929|emb|CCD63999.1| Protein CKS-1 [Caenorhabditis elegans]
          Length = 94

 Score =  106 bits (264), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 46/79 (58%), Positives = 59/79 (74%)

Query: 6  YSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHIM 65
          YS KY DD +EYRHV +  DV+KL+PKNRL+SETEWR++G+QQS GW+HY IH PE H++
Sbjct: 10 YSNKYEDDEFEYRHVHVTKDVSKLIPKNRLMSETEWRSLGIQQSPGWMHYMIHGPERHVL 69

Query: 66 LFRRPLNYQQQQENQAQQN 84
          LFRRPL   Q+     +  
Sbjct: 70 LFRRPLAATQKTGGNVRSG 88


>gi|225716420|gb|ACO14056.1| Cyclin-dependent kinases regulatory subunit 1 [Esox lucius]
          Length = 76

 Score =  106 bits (264), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 44/69 (63%), Positives = 59/69 (85%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY D+ +EYRHV+LP  ++KL+P + L++E EWR +GVQQS+GW+HY IH+PEP
Sbjct: 5  QIYYSDKYTDEEFEYRHVMLPKQLSKLVPTSHLMTEDEWRGLGVQQSQGWIHYVIHKPEP 64

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 65 HILLFRRPL 73


>gi|327263367|ref|XP_003216491.1| PREDICTED: cyclin-dependent kinases regulatory subunit 2-like
          [Anolis carolinensis]
          Length = 79

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 48/75 (64%), Positives = 60/75 (80%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY D+ YEYRHV+LP +++K +PK  L++E EWR +GVQQS GWVHY IH PEP
Sbjct: 5  QIYYSDKYCDENYEYRHVMLPRELSKQVPKTHLMTEEEWRRLGVQQSLGWVHYMIHEPEP 64

Query: 63 HIMLFRRPLNYQQQQ 77
          HI+LFRRPL   QQ+
Sbjct: 65 HILLFRRPLPKGQQK 79


>gi|443695643|gb|ELT96509.1| hypothetical protein CAPTEDRAFT_164893 [Capitella teleta]
          Length = 77

 Score =  105 bits (263), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 56/67 (83%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY D  YEYRHV+LP ++AKL+PK  L+SE EWR+IGVQQS+GW HY +H PEP
Sbjct: 7  QIYYSDKYQDGDYEYRHVMLPKEIAKLVPKTHLMSEAEWRSIGVQQSQGWQHYMVHEPEP 66

Query: 63 HIMLFRR 69
          HI+LFRR
Sbjct: 67 HILLFRR 73


>gi|72013151|ref|XP_784027.1| PREDICTED: cyclin-dependent kinases regulatory subunit-like
          [Strongylocentrotus purpuratus]
          Length = 81

 Score =  105 bits (263), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 48/78 (61%), Positives = 60/78 (76%), Gaps = 1/78 (1%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
           I YS+KYF   +EYRHV+LP D+AKL+P N L+SE EWRAIGVQQS+GW++Y +H PEP
Sbjct: 5  NIYYSDKYFAGDFEYRHVMLPKDIAKLVP-NHLMSEKEWRAIGVQQSQGWINYMVHSPEP 63

Query: 63 HIMLFRRPLNYQQQQENQ 80
          HI+LFRRP+       NQ
Sbjct: 64 HILLFRRPITKPLGDHNQ 81


>gi|110756552|ref|XP_001121822.1| PREDICTED: cyclin-dependent kinases regulatory subunit-like [Apis
          mellifera]
 gi|380025028|ref|XP_003696283.1| PREDICTED: cyclin-dependent kinases regulatory subunit-like
          isoform 1 [Apis florea]
 gi|380025030|ref|XP_003696284.1| PREDICTED: cyclin-dependent kinases regulatory subunit-like
          isoform 2 [Apis florea]
          Length = 79

 Score =  105 bits (262), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 45/70 (64%), Positives = 58/70 (82%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          ++ YS+KY+DD YEYRHVVLP ++ K +P   LLSE EWRA+GVQQS+GWVHY IH+PEP
Sbjct: 4  KMYYSDKYYDDKYEYRHVVLPKEMVKSVPTTHLLSEQEWRAMGVQQSQGWVHYMIHKPEP 63

Query: 63 HIMLFRRPLN 72
          HI+LF+R + 
Sbjct: 64 HILLFKRKIT 73


>gi|291392205|ref|XP_002712626.1| PREDICTED: CDC28 protein kinase 1B-like [Oryctolagus cuniculus]
          Length = 100

 Score =  105 bits (262), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 58/69 (84%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY D+ +EYRHV+LP D+AKL+PK  L+SE+EWR +GVQQS+GWVHY IH PEP
Sbjct: 26 QIYYSDKYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEP 85

Query: 63 HIMLFRRPL 71
          HI+LF R L
Sbjct: 86 HILLFWRLL 94


>gi|226372430|gb|ACO51840.1| Cyclin-dependent kinases regulatory subunit 2 [Rana catesbeiana]
          Length = 79

 Score =  105 bits (262), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 48/74 (64%), Positives = 58/74 (78%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I YS+KY D+ YEYRHV+LP ++AK +PK  L+SE EWR +GVQQS GW HY IH PEPH
Sbjct: 6  IYYSDKYTDEKYEYRHVMLPKELAKQVPKTHLMSEEEWRRLGVQQSLGWAHYMIHEPEPH 65

Query: 64 IMLFRRPLNYQQQQ 77
          I+LFRRPL   QQ+
Sbjct: 66 ILLFRRPLPKDQQK 79


>gi|426219805|ref|XP_004004108.1| PREDICTED: cyclin-dependent kinases regulatory subunit 2 [Ovis
          aries]
          Length = 79

 Score =  105 bits (262), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 48/75 (64%), Positives = 60/75 (80%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KYFD+ Y +RHV+LP +++K +PK  L+SE EWR +GVQQS GWVHY IH PEP
Sbjct: 5  QIYYSDKYFDEHYAHRHVMLPRELSKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEPEP 64

Query: 63 HIMLFRRPLNYQQQQ 77
          HI+LFRRPL   QQ+
Sbjct: 65 HILLFRRPLPKDQQK 79


>gi|403344283|gb|EJY71480.1| Cyclin-dependent kinases regulatory subunit [Oxytricha trifallax]
          Length = 89

 Score =  105 bits (262), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 48/78 (61%), Positives = 59/78 (75%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI+YSEKY DDTYEYRHV LP +    L ++ LL+E EWR +G+Q S GW HY I +PEP
Sbjct: 8  QIEYSEKYNDDTYEYRHVTLPENAFANLKRDVLLTEDEWRTLGLQMSTGWEHYLIFKPEP 67

Query: 63 HIMLFRRPLNYQQQQENQ 80
           +MLFRRPLNYQ +Q +Q
Sbjct: 68 FVMLFRRPLNYQFKQNHQ 85


>gi|350582091|ref|XP_003354761.2| PREDICTED: hypothetical protein LOC100516004 [Sus scrofa]
          Length = 286

 Score =  105 bits (262), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 58/69 (84%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY +  +EYRHV+LP D+AKL+PK  L+SE+EWR +G+QQS+GWVHY IH PEP
Sbjct: 5  QIYYSDKYDNKEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGIQQSQGWVHYMIHEPEP 64

Query: 63 HIMLFRRPL 71
          HI+LF+ PL
Sbjct: 65 HILLFQWPL 73


>gi|221219826|gb|ACM08574.1| Cyclin-dependent kinases regulatory subunit 1 [Salmo salar]
 gi|221220080|gb|ACM08701.1| Cyclin-dependent kinases regulatory subunit 1 [Salmo salar]
 gi|221221546|gb|ACM09434.1| Cyclin-dependent kinases regulatory subunit 1 [Salmo salar]
          Length = 76

 Score =  105 bits (262), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 59/69 (85%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          +I YS+KY D+ +EYRHV+LP  ++KL+P + L++E EWR +GVQQS+GW+HY IH+PEP
Sbjct: 5  EIYYSDKYTDEAFEYRHVMLPKQLSKLVPTSHLMTEDEWRGLGVQQSQGWIHYMIHKPEP 64

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 65 HILLFRRPL 73


>gi|268561100|ref|XP_002646364.1| Hypothetical protein CBG12081 [Caenorhabditis briggsae]
          Length = 105

 Score =  105 bits (261), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 47/88 (53%), Positives = 64/88 (72%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          M  I YS +Y DD YEYRHV+LP  +AK +P+++LL+E EWR +GV QS GW HY +H P
Sbjct: 1  MDDIYYSPRYEDDDYEYRHVILPHGLAKQIPRDKLLTEGEWRRLGVTQSLGWEHYMVHNP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQNILAK 88
          E HI+LFRR  N+ +Q E +A+Q +L +
Sbjct: 61 ERHILLFRRRRNFSKQDEERAKQRLLKE 88


>gi|148232357|ref|NP_001081798.1| cyclin-dependent kinases regulatory subunit 2 [Xenopus laevis]
 gi|2493726|sp|Q91879.1|CKS2_XENLA RecName: Full=Cyclin-dependent kinases regulatory subunit 2;
          AltName: Full=Xe-p9
 gi|1465749|gb|AAC59914.1| essential; similar to human cyclin dependent kinase subunit type
          2, Swiss-Prot Accession Number P33552 [Xenopus laevis]
 gi|46250308|gb|AAH68722.1| Cks2a protein [Xenopus laevis]
          Length = 79

 Score =  105 bits (261), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 48/74 (64%), Positives = 59/74 (79%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I YS+KY D+ +EYRHV+LP ++AK +PK  L+SE EWR +GVQQS GWVHY IH PEPH
Sbjct: 6  IYYSDKYTDEHFEYRHVMLPKELAKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEPEPH 65

Query: 64 IMLFRRPLNYQQQQ 77
          I+LFRRPL   QQ+
Sbjct: 66 ILLFRRPLPKDQQK 79


>gi|74026260|ref|XP_829696.1| cyclin dependant kinase regulatory subunit [Trypanosoma brucei
          TREU927]
 gi|23392951|emb|CAD43044.1| cyclin dependant kinases regulatory subunit [Trypanosoma brucei]
 gi|70835082|gb|EAN80584.1| cyclin dependant kinases regulatory subunit, putative
          [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
 gi|261335729|emb|CBH18723.1| cyclin dependant kinases regulatory subunit,putative [Trypanosoma
          brucei gambiense DAL972]
          Length = 98

 Score =  105 bits (261), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 57/69 (82%)

Query: 2  GQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPE 61
           +I YS+KY+DD YEYRHV+LP D ++L+P+ RL+ E+EWR +GVQQS GW HY +H PE
Sbjct: 27 SKILYSDKYYDDEYEYRHVILPKDFSRLVPRGRLMEESEWRQLGVQQSVGWRHYMLHAPE 86

Query: 62 PHIMLFRRP 70
          PH++LF+RP
Sbjct: 87 PHVLLFKRP 95


>gi|284448130|ref|NP_001165207.1| CDC28 protein kinase regulatory subunit 1B [Xenopus laevis]
 gi|77748350|gb|AAI06545.1| MGC131304 protein [Xenopus laevis]
          Length = 78

 Score =  105 bits (261), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 47/68 (69%), Positives = 57/68 (83%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I YS+KY D+ YEYRHV+LP D+AK +PK  L+SE+EWR +GVQQS+GWVHY IH PEPH
Sbjct: 6  IYYSDKYDDELYEYRHVMLPKDIAKRVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEPH 65

Query: 64 IMLFRRPL 71
          I+LFRR L
Sbjct: 66 ILLFRRLL 73


>gi|308449360|ref|XP_003087938.1| hypothetical protein CRE_27999 [Caenorhabditis remanei]
 gi|308462509|ref|XP_003093537.1| hypothetical protein CRE_19472 [Caenorhabditis remanei]
 gi|308250078|gb|EFO94030.1| hypothetical protein CRE_19472 [Caenorhabditis remanei]
 gi|308250839|gb|EFO94791.1| hypothetical protein CRE_27999 [Caenorhabditis remanei]
          Length = 95

 Score =  105 bits (261), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 45/66 (68%), Positives = 55/66 (83%)

Query: 6  YSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHIM 65
          YS KY DD YEYRHV +  D+AKL+PKNRL+SETEWR++G+QQS GW+HY IH PE H++
Sbjct: 10 YSNKYEDDEYEYRHVHVTKDIAKLIPKNRLMSETEWRSLGIQQSPGWIHYMIHGPERHVL 69

Query: 66 LFRRPL 71
          LFRR L
Sbjct: 70 LFRRAL 75


>gi|224088667|ref|XP_002192954.1| PREDICTED: cyclin-dependent kinases regulatory subunit 2 isoform
          1 [Taeniopygia guttata]
 gi|449513833|ref|XP_004174946.1| PREDICTED: cyclin-dependent kinases regulatory subunit 2 isoform
          2 [Taeniopygia guttata]
          Length = 79

 Score =  104 bits (260), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 48/75 (64%), Positives = 60/75 (80%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS KY D+ YEYRHV+LP +++K +PK+ L+SE EWR +GVQQS GWVHY IH PEP
Sbjct: 5  QIYYSNKYSDEQYEYRHVMLPRELSKQVPKSHLMSEEEWRRLGVQQSLGWVHYMIHEPEP 64

Query: 63 HIMLFRRPLNYQQQQ 77
          HI+LFRRPL   +Q+
Sbjct: 65 HILLFRRPLPKDEQK 79


>gi|341890567|gb|EGT46502.1| hypothetical protein CAEBREN_11293 [Caenorhabditis brenneri]
          Length = 98

 Score =  104 bits (260), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 45/66 (68%), Positives = 56/66 (84%)

Query: 6  YSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHIM 65
          YS+KY DD +EYRHV +  +VAKL+PK+RLLSETEWR+ G+QQS GW+HY IH PE H++
Sbjct: 10 YSDKYEDDEFEYRHVHVTKEVAKLIPKDRLLSETEWRSFGIQQSPGWIHYMIHGPERHVL 69

Query: 66 LFRRPL 71
          LFRRPL
Sbjct: 70 LFRRPL 75


>gi|312080795|ref|XP_003142752.1| cyclin-dependent kinase regulatory subunit [Loa loa]
 gi|307762081|gb|EFO21315.1| cyclin-dependent kinase regulatory subunit [Loa loa]
          Length = 92

 Score =  104 bits (260), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 44/66 (66%), Positives = 56/66 (84%)

Query: 6  YSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHIM 65
          YS KY DD YEYRHV +P D+ +L+PK+RL+SE EWR++G+QQS+GWVHY IH PE H++
Sbjct: 10 YSNKYSDDRYEYRHVHVPKDLVRLIPKDRLMSEKEWRSLGIQQSQGWVHYMIHTPERHVL 69

Query: 66 LFRRPL 71
          LFRRPL
Sbjct: 70 LFRRPL 75


>gi|340059851|emb|CCC54248.1| putative cyclin dependent kinases regulatory subunit [Trypanosoma
          vivax Y486]
          Length = 98

 Score =  104 bits (259), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 41/69 (59%), Positives = 57/69 (82%)

Query: 2  GQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPE 61
           +I YS+KY+DD +EYRHV+LP D ++L+P+ RL+ E+EWR +GVQQS GW HY +H PE
Sbjct: 27 SKILYSDKYYDDEFEYRHVILPKDFSRLVPRGRLMEESEWRQLGVQQSVGWRHYMLHAPE 86

Query: 62 PHIMLFRRP 70
          PH++LF+RP
Sbjct: 87 PHVLLFKRP 95


>gi|145550066|ref|XP_001460712.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124428542|emb|CAK93315.1| unnamed protein product [Paramecium tetraurelia]
          Length = 92

 Score =  104 bits (259), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 55/67 (82%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I+YS+KY DD YEYRHV+LP  + K + K +LLSE EWR +GVQQSRGWVHY  HRPEPH
Sbjct: 8  IEYSDKYQDDYYEYRHVILPKHIFKKITKGKLLSEMEWRNLGVQQSRGWVHYECHRPEPH 67

Query: 64 IMLFRRP 70
          I+LFRRP
Sbjct: 68 ILLFRRP 74


>gi|145510676|ref|XP_001441271.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124408510|emb|CAK73874.1| unnamed protein product [Paramecium tetraurelia]
          Length = 92

 Score =  104 bits (259), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 55/67 (82%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I+YS+KY DD YEYRHV+LP  + K + K +LLSE EWR +GVQQSRGW+HY  HRPEPH
Sbjct: 8  IEYSDKYQDDYYEYRHVILPKHIFKKITKGKLLSEMEWRNLGVQQSRGWIHYECHRPEPH 67

Query: 64 IMLFRRP 70
          I+LFRRP
Sbjct: 68 ILLFRRP 74


>gi|403370881|gb|EJY85308.1| Cyclindependent kinase regulatory subunit putative [Oxytricha
          trifallax]
          Length = 104

 Score =  103 bits (258), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 57/70 (81%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          +I+YSEKY DD +EYRHV+LP  + K  P+ RLL+E EWR +GVQQSRGWVHY IH+PEP
Sbjct: 7  EIEYSEKYQDDLFEYRHVLLPKHIYKKAPRGRLLTEHEWRTLGVQQSRGWVHYEIHKPEP 66

Query: 63 HIMLFRRPLN 72
           I+LFRRP+ 
Sbjct: 67 FILLFRRPIG 76


>gi|341894807|gb|EGT50742.1| hypothetical protein CAEBREN_20813 [Caenorhabditis brenneri]
          Length = 98

 Score =  103 bits (258), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 44/66 (66%), Positives = 56/66 (84%)

Query: 6  YSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHIM 65
          YS+KY DD +EYRHV +  +VAKL+PK+RL+SETEWR+ G+QQS GW+HY IH PE H++
Sbjct: 10 YSDKYEDDEFEYRHVHVTKEVAKLIPKDRLMSETEWRSFGIQQSPGWIHYMIHGPERHVL 69

Query: 66 LFRRPL 71
          LFRRPL
Sbjct: 70 LFRRPL 75


>gi|170576501|ref|XP_001893655.1| Cyclin-dependent kinases regulatory subunit [Brugia malayi]
 gi|158600219|gb|EDP37513.1| Cyclin-dependent kinases regulatory subunit, putative [Brugia
          malayi]
          Length = 92

 Score =  103 bits (258), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 46/76 (60%), Positives = 57/76 (75%)

Query: 6  YSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHIM 65
          YS KY DD YEYRHV +P D+ +L+PK+RL+SE EWR++G+QQS GWVHY IH PE H++
Sbjct: 10 YSNKYNDDKYEYRHVHVPKDLVRLIPKDRLMSEKEWRSLGIQQSPGWVHYMIHSPERHVL 69

Query: 66 LFRRPLNYQQQQENQA 81
          LFRRPL      EN  
Sbjct: 70 LFRRPLKDIICDENNG 85


>gi|145547300|ref|XP_001459332.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124427156|emb|CAK91935.1| unnamed protein product [Paramecium tetraurelia]
          Length = 92

 Score =  103 bits (258), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 55/67 (82%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I+YS+KY D+ YEYRHV+LP  V K L K +LL+E EWR +GVQQSRGWVHY  HRPEPH
Sbjct: 8  IEYSDKYQDEFYEYRHVILPKHVFKKLTKGKLLNEMEWRGLGVQQSRGWVHYECHRPEPH 67

Query: 64 IMLFRRP 70
          I+LFRRP
Sbjct: 68 ILLFRRP 74


>gi|301102289|ref|XP_002900232.1| cyclin-dependent kinase regulatory subunit [Phytophthora
          infestans T30-4]
 gi|262102384|gb|EEY60436.1| cyclin-dependent kinase regulatory subunit [Phytophthora
          infestans T30-4]
          Length = 79

 Score =  103 bits (257), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 46/66 (69%), Positives = 58/66 (87%), Gaps = 1/66 (1%)

Query: 2  GQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPE 61
           +I+YSEKY DDT+EYRHV+LP ++ + LP +RLL+ETEWR +GVQQSRGWVHYAIH+PE
Sbjct: 7  SRIEYSEKYVDDTHEYRHVILPKEMQRSLP-DRLLTETEWRQLGVQQSRGWVHYAIHKPE 65

Query: 62 PHIMLF 67
          PHI+L 
Sbjct: 66 PHILLL 71


>gi|242017818|ref|XP_002429383.1| Cyclin-dependent kinases regulatory subunit, putative [Pediculus
          humanus corporis]
 gi|212514296|gb|EEB16645.1| Cyclin-dependent kinases regulatory subunit, putative [Pediculus
          humanus corporis]
          Length = 80

 Score =  103 bits (256), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 56/68 (82%)

Query: 2  GQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPE 61
           +IQYSEKYF   +EYRHV+LP D+A+ +P+  L++ETEWR +GVQQS GW+H+ IH PE
Sbjct: 4  SEIQYSEKYFCKNFEYRHVILPTDLARKVPRTHLMTETEWRNLGVQQSPGWIHFMIHDPE 63

Query: 62 PHIMLFRR 69
          PH++LFRR
Sbjct: 64 PHVLLFRR 71


>gi|395333746|gb|EJF66123.1| CKS-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
          Length = 121

 Score =  103 bits (256), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 47/83 (56%), Positives = 58/83 (69%), Gaps = 10/83 (12%)

Query: 3   QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN----------RLLSETEWRAIGVQQSRGW 52
           +I YSE+Y DD YEYRHV+LP  + K++PKN          RLLSE EWR IG+ QS GW
Sbjct: 21  KIHYSERYSDDEYEYRHVILPKPLFKMIPKNFFSPDNSGTLRLLSEEEWRGIGITQSLGW 80

Query: 53  VHYAIHRPEPHIMLFRRPLNYQQ 75
            HY +H PEPH++LFRRP N+ Q
Sbjct: 81  EHYEVHAPEPHVLLFRRPKNFDQ 103


>gi|340508542|gb|EGR34226.1| hypothetical protein IMG5_020010 [Ichthyophthirius multifiliis]
          Length = 92

 Score =  103 bits (256), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 57/70 (81%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          +I+YS+KY D+ YEYRHV+LP  + K + K RLL E EWR +GVQQSRGW+HY IH+PEP
Sbjct: 7  EIEYSDKYQDEYYEYRHVLLPKALFKKISKGRLLEEMEWRQLGVQQSRGWIHYEIHKPEP 66

Query: 63 HIMLFRRPLN 72
          HI+LFRRPL 
Sbjct: 67 HILLFRRPLG 76


>gi|17510607|ref|NP_490896.1| Protein Y71G12B.27 [Caenorhabditis elegans]
 gi|373219441|emb|CCD67980.1| Protein Y71G12B.27 [Caenorhabditis elegans]
          Length = 118

 Score =  103 bits (256), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 47/86 (54%), Positives = 60/86 (69%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          M  I YS +Y DD YEYRHV+LP  V++ +PK RLLSE EWR  GVQQS GW HY +H P
Sbjct: 1  MEDIYYSPRYEDDEYEYRHVILPQAVSRKVPKGRLLSEAEWRRAGVQQSLGWEHYMVHNP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQNIL 86
          E HI+LFRR  ++ +  E +A+  +L
Sbjct: 61 EKHILLFRRKRHFTKADEERAKMELL 86


>gi|300175377|emb|CBK20688.2| unnamed protein product [Blastocystis hominis]
          Length = 102

 Score =  102 bits (255), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 41/70 (58%), Positives = 57/70 (81%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY+D+TYEYRHV LP +++K  P  +LL+E EWR++G++ S GW HYA H+P+P
Sbjct: 6  QIDYSDKYYDETYEYRHVTLPKELSKQFPAGKLLTEQEWRSLGIRMSLGWEHYATHKPDP 65

Query: 63 HIMLFRRPLN 72
          +I+LFRRPL 
Sbjct: 66 NILLFRRPLG 75


>gi|393216705|gb|EJD02195.1| CKS-domain-containing protein [Fomitiporia mediterranea MF3/22]
          Length = 117

 Score =  102 bits (255), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 48/87 (55%), Positives = 60/87 (68%), Gaps = 10/87 (11%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN----------RLLSETEWRAIGVQQSR 50
           + +I YSE+Y DD +EYRHV+LP  + KL+PK           RLLSE EWR IG+ QS 
Sbjct: 19  VDKIHYSERYCDDKFEYRHVILPKPLLKLIPKQFFNPDDSGTLRLLSEKEWRGIGITQSL 78

Query: 51  GWVHYAIHRPEPHIMLFRRPLNYQQQQ 77
           GWVHY +H PEPH++LFRR LNY+  Q
Sbjct: 79  GWVHYEVHTPEPHVLLFRRELNYKPPQ 105


>gi|444511892|gb|ELV09966.1| Cyclin-dependent kinases regulatory subunit 1 [Tupaia chinensis]
          Length = 79

 Score =  102 bits (254), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 56/69 (81%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI  S+KY D+ +EYRHV+LP  +AKL+PK  L+SE+EWR +GVQQS+GWVHY  H PEP
Sbjct: 5  QIYCSDKYDDEEFEYRHVMLPKAIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMTHEPEP 64

Query: 63 HIMLFRRPL 71
          H+ LFRRPL
Sbjct: 65 HLWLFRRPL 73


>gi|341876614|gb|EGT32549.1| hypothetical protein CAEBREN_08072 [Caenorhabditis brenneri]
          Length = 103

 Score =  102 bits (254), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 45/86 (52%), Positives = 62/86 (72%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          M  I YS +Y DD +EYRHV+LP  +A+ LPK++LLSE EWR  GV QS GW HY +H P
Sbjct: 1  MDDIYYSPRYEDDEFEYRHVILPHALARQLPKDKLLSEAEWRRFGVTQSLGWEHYMVHNP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQNIL 86
          E HI+LFRR  N+ ++ E +A+ +++
Sbjct: 61 EKHILLFRRRRNFTKEDEERAKLSLM 86


>gi|259089337|ref|NP_001158707.1| cyclin-dependent kinases regulatory subunit 1 [Oncorhynchus
          mykiss]
 gi|225704624|gb|ACO08158.1| Cyclin-dependent kinases regulatory subunit 2 [Oncorhynchus
          mykiss]
          Length = 87

 Score =  102 bits (254), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY D+ YEYRHVVLP ++ K +PK+ L+SE EW  +GVQQS GWVHY IH PEP
Sbjct: 16 QIYYSDKYNDEHYEYRHVVLPREMVKQVPKSHLMSEDEWGRMGVQQSLGWVHYMIHEPEP 75

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 76 HILLFRRPL 84


>gi|344242000|gb|EGV98103.1| Cyclin-dependent kinases regulatory subunit 1 [Cricetulus
          griseus]
          Length = 80

 Score =  102 bits (254), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 47/70 (67%), Positives = 59/70 (84%), Gaps = 1/70 (1%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHY-AIHRPE 61
          QI YS+KY D+ +EYRHV+LP D+AKL+PK  L+SE+EWR +GVQQS+GWVHY  IH PE
Sbjct: 5  QIYYSDKYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMMIHEPE 64

Query: 62 PHIMLFRRPL 71
           HI+LFR+PL
Sbjct: 65 LHILLFRQPL 74


>gi|47219471|emb|CAG10835.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 69

 Score =  102 bits (253), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 45/65 (69%), Positives = 55/65 (84%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY DD YEYRHV+LP ++AK +PK  L+SETEWR +GVQQS+GWVHY IH+PEP
Sbjct: 5  QIYYSDKYDDDKYEYRHVMLPKEIAKRVPKTHLMSETEWRNLGVQQSQGWVHYMIHQPEP 64

Query: 63 HIMLF 67
          HI+ F
Sbjct: 65 HILSF 69


>gi|260792495|ref|XP_002591250.1| hypothetical protein BRAFLDRAFT_58416 [Branchiostoma floridae]
 gi|229276454|gb|EEN47261.1| hypothetical protein BRAFLDRAFT_58416 [Branchiostoma floridae]
          Length = 74

 Score =  102 bits (253), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 44/67 (65%), Positives = 56/67 (83%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          IQYS+KY D+T+EYRHV+LP ++   +PKN L++ETEWR +GVQQS  W+HY IH PEPH
Sbjct: 2  IQYSDKYKDETFEYRHVILPTELVHQVPKNHLMTETEWRNLGVQQSPYWIHYMIHCPEPH 61

Query: 64 IMLFRRP 70
          I+LFRRP
Sbjct: 62 ILLFRRP 68


>gi|85702318|ref|NP_001033011.1| predicted gene 6531 [Mus musculus]
 gi|74188323|dbj|BAE25818.1| unnamed protein product [Mus musculus]
 gi|148679055|gb|EDL11002.1| mCG132387 [Mus musculus]
 gi|187955166|gb|AAI47101.1| Predicted gene, EG624855 [Mus musculus]
 gi|187955558|gb|AAI47102.1| Predicted gene, EG624855 [Mus musculus]
          Length = 96

 Score =  101 bits (252), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 57/69 (82%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY D+ +EYRHV+LP D+ KL+PK  L+SE+EWR +GVQQS+GWVHY IH PE 
Sbjct: 22 QIYYSDKYDDEEFEYRHVMLPKDIDKLVPKTHLMSESEWRKLGVQQSQGWVHYMIHEPEL 81

Query: 63 HIMLFRRPL 71
          HI+LF+ PL
Sbjct: 82 HILLFQWPL 90


>gi|341896450|gb|EGT52385.1| hypothetical protein CAEBREN_14453 [Caenorhabditis brenneri]
          Length = 103

 Score =  101 bits (251), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 45/86 (52%), Positives = 62/86 (72%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          M  I YS +Y DD +EYRHV+LP  +A+ LPK++LLSE EWR  GV QS GW HY +H P
Sbjct: 1  MDDIYYSPRYEDDEFEYRHVILPHALARQLPKDKLLSEAEWRRFGVTQSLGWEHYMVHNP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQNIL 86
          E HI+LFRR  N+ ++ E +A+ +++
Sbjct: 61 ERHILLFRRRRNFTKEDEERAKLSLM 86


>gi|391341099|ref|XP_003744869.1| PREDICTED: cyclin-dependent kinases regulatory subunit 2-like
          [Metaseiulus occidentalis]
          Length = 93

 Score =  101 bits (251), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 44/83 (53%), Positives = 62/83 (74%), Gaps = 2/83 (2%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I YS+KY+DD YEYRHV+LP  +A  +P+  L++E+EWR +GVQQS GW+H+ IH PEPH
Sbjct: 6  ISYSDKYYDDKYEYRHVILPKQIAARVPRTHLMTESEWRQLGVQQSPGWIHFMIHVPEPH 65

Query: 64 IMLFRRPLNYQQ--QQENQAQQN 84
          I+LFRR +  ++   QE Q + +
Sbjct: 66 ILLFRRAIPKEKVPDQEEQVRND 88


>gi|323450768|gb|EGB06648.1| hypothetical protein AURANDRAFT_29013 [Aureococcus
          anophagefferens]
          Length = 110

 Score =  101 bits (251), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 43/71 (60%), Positives = 56/71 (78%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          + +I+YSEKY D+ YEYRHV++P ++AK LP++ L+SE EWR  G+Q SRGW H+ IHRP
Sbjct: 7  ISRIEYSEKYNDENYEYRHVIMPKELAKSLPRSTLMSEQEWRNAGIQMSRGWQHFMIHRP 66

Query: 61 EPHIMLFRRPL 71
          E HI LFRR L
Sbjct: 67 ERHIFLFRRAL 77


>gi|50344876|ref|NP_001002110.1| cyclin-dependent kinases regulatory subunit 2 [Danio rerio]
 gi|47938020|gb|AAH71486.1| Zgc:86839 [Danio rerio]
          Length = 75

 Score =  100 bits (250), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY DD +EYRHVVLP ++AK +PK+ L+SE E R +GVQQS GWVHY IH PE 
Sbjct: 5  QIYYSDKYTDDHFEYRHVVLPRELAKQVPKSHLMSEDECRRLGVQQSLGWVHYMIHEPES 64

Query: 63 HIMLFRRPL 71
          HI+LFRRPL
Sbjct: 65 HILLFRRPL 73


>gi|402220729|gb|EJU00800.1| cyclin-dependent kinase regulatory subunit [Dacryopinax sp.
          DJM-731 SS1]
          Length = 120

 Score =  100 bits (249), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 45/87 (51%), Positives = 59/87 (67%), Gaps = 10/87 (11%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN----------RLLSETEWRAIGVQQSRGW 52
          +I YS++Y DD +EYRHV+LP  + K++PK           RLL+E EWR IG+ QS GW
Sbjct: 11 RIGYSDRYSDDKFEYRHVILPKPLLKMIPKEFFAADGSGTLRLLTEAEWRGIGITQSLGW 70

Query: 53 VHYAIHRPEPHIMLFRRPLNYQQQQEN 79
           HY +H PEPH++LFRRP NYQ  Q+ 
Sbjct: 71 EHYEVHAPEPHVLLFRRPKNYQPPQQT 97


>gi|449547253|gb|EMD38221.1| hypothetical protein CERSUDRAFT_113376 [Ceriporiopsis subvermispora
           B]
          Length = 120

 Score =  100 bits (248), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/88 (55%), Positives = 60/88 (68%), Gaps = 13/88 (14%)

Query: 3   QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN----------RLLSETEWRAIGVQQSRGW 52
           +I YSE+Y DD YEYRHV+LP  + K++PK           RLL+E EWR IG+ QS GW
Sbjct: 19  KIHYSERYSDDEYEYRHVILPKPLFKMIPKQFFSPDNSGVLRLLTEEEWRGIGITQSLGW 78

Query: 53  VHYAIHRPEPHIMLFRRPLNY---QQQQ 77
            HY +H PEPH++LFRRP NY   QQQQ
Sbjct: 79  EHYEVHAPEPHVLLFRRPKNYVPPQQQQ 106


>gi|390597688|gb|EIN07087.1| cyclin-dependent kinase regulatory subunit [Punctularia
           strigosozonata HHB-11173 SS5]
          Length = 116

 Score =  100 bits (248), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 61/94 (64%), Gaps = 10/94 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN----------RLLSETEWRAIGVQQSR 50
           + +I YS++Y DD +EYRHV+LP  + K++PK           RLL+E EWR IG+ QS 
Sbjct: 14  LNKIHYSDRYSDDEFEYRHVILPKPLFKMIPKQYFNPDESGTLRLLTEAEWRGIGITQSL 73

Query: 51  GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQN 84
           GWVHY +H PEPH++LFRRP N+  + +     N
Sbjct: 74  GWVHYEVHAPEPHVLLFRRPKNFDAEHQVAPAAN 107


>gi|156382810|ref|XP_001632745.1| predicted protein [Nematostella vectensis]
 gi|156219805|gb|EDO40682.1| predicted protein [Nematostella vectensis]
          Length = 86

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/77 (58%), Positives = 58/77 (75%), Gaps = 5/77 (6%)

Query: 8  EKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHIMLF 67
          EKYFD+ +EYRHV+LP ++   +P   L++E+EWR +GVQQS GWVHY IH PEPH++LF
Sbjct: 14 EKYFDEYFEYRHVMLPKELVSQVPSVHLMTESEWRNLGVQQSPGWVHYLIHEPEPHVLLF 73

Query: 68 RRPLNYQQQQENQAQQN 84
          RRPL     Q N A+QN
Sbjct: 74 RRPL-----QNNSAEQN 85


>gi|440796550|gb|ELR17659.1| Cyclindependent kinase, putative [Acanthamoeba castellanii str.
          Neff]
          Length = 87

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 48/71 (67%), Positives = 57/71 (80%), Gaps = 1/71 (1%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KY DD +EYRHV+LP  +AK LP  RLL+ETEWRA+GVQQS GW HY  H PEP
Sbjct: 4  QIIYSDKYSDDEFEYRHVILPKQLAKKLPA-RLLTETEWRALGVQQSPGWEHYERHDPEP 62

Query: 63 HIMLFRRPLNY 73
          HI+LFRR L++
Sbjct: 63 HILLFRRALDH 73


>gi|354487098|ref|XP_003505712.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1-like
          [Cricetulus griseus]
 gi|344244218|gb|EGW00322.1| Cyclin-dependent kinases regulatory subunit 1 [Cricetulus
          griseus]
          Length = 80

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 58/70 (82%), Gaps = 1/70 (1%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHY-AIHRPE 61
          QI Y +KY D+ +EYRHV+LP D+AKL+PK  L+SE+EWR +GVQQS+GWVHY  IH PE
Sbjct: 5  QIYYLDKYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMMIHEPE 64

Query: 62 PHIMLFRRPL 71
           HI+LFR+PL
Sbjct: 65 LHILLFRQPL 74


>gi|293346974|ref|XP_002726440.1| PREDICTED: cyclin-dependent kinases regulatory subunit 2-like
          [Rattus norvegicus]
 gi|392347535|ref|XP_003749856.1| PREDICTED: cyclin-dependent kinases regulatory subunit 2-like
          [Rattus norvegicus]
          Length = 79

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/75 (60%), Positives = 60/75 (80%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KYF+  YEY HV+LP +++K +PK  L+SE EWR +GVQ++ GWVHY IH PEP
Sbjct: 5  QIYYSDKYFNKHYEYWHVMLPRELSKQVPKTHLMSEEEWRRLGVQKNLGWVHYMIHEPEP 64

Query: 63 HIMLFRRPLNYQQQQ 77
          HI+LFR+PL  +QQ+
Sbjct: 65 HILLFRQPLPKEQQK 79


>gi|396471833|ref|XP_003838963.1| hypothetical protein LEMA_P026360.1 [Leptosphaeria maculans JN3]
 gi|312215532|emb|CBX95484.1| hypothetical protein LEMA_P026360.1 [Leptosphaeria maculans JN3]
          Length = 942

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/80 (55%), Positives = 56/80 (70%), Gaps = 9/80 (11%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y DD YEYRHV LP  + K++PK+         +LL E EWRA+G+ QS GW H
Sbjct: 859 IHYSARYSDDEYEYRHVQLPKQMLKMIPKDYFDGARGTLKLLWEDEWRALGITQSLGWEH 918

Query: 55  YAIHRPEPHIMLFRRPLNYQ 74
           Y +H PEPHI+LF+RP+NYQ
Sbjct: 919 YEVHEPEPHILLFKRPINYQ 938


>gi|409045836|gb|EKM55316.1| hypothetical protein PHACADRAFT_255850 [Phanerochaete carnosa
           HHB-10118-sp]
          Length = 127

 Score = 99.4 bits (246), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 45/88 (51%), Positives = 59/88 (67%), Gaps = 10/88 (11%)

Query: 3   QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN----------RLLSETEWRAIGVQQSRGW 52
           +I YSE+Y DD YEYRHV+LP  + K++PK           RLLS+ EWR IG+ QS GW
Sbjct: 20  KIHYSERYSDDLYEYRHVILPKPLFKMIPKQFFNPDSSGTLRLLSDKEWRGIGITQSLGW 79

Query: 53  VHYAIHRPEPHIMLFRRPLNYQQQQENQ 80
            HY +H PEPH++LFRRP ++ +Q   Q
Sbjct: 80  EHYEVHAPEPHVLLFRRPKDFDEQLRRQ 107


>gi|328868447|gb|EGG16825.1| cyclin-dependent kinases regulatory subunit [Dictyostelium
          fasciculatum]
          Length = 83

 Score = 99.4 bits (246), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 41/66 (62%), Positives = 55/66 (83%)

Query: 5  QYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHI 64
           YS KY+D+ YEYRHV+LP +++ L+PK +LL+E E R +G++QS GWVHYA H+PEPHI
Sbjct: 6  HYSNKYYDNQYEYRHVILPIEISNLIPKGKLLTEDECRKVGIRQSDGWVHYANHKPEPHI 65

Query: 65 MLFRRP 70
          +LFRRP
Sbjct: 66 LLFRRP 71


>gi|390359903|ref|XP_003729586.1| PREDICTED: cyclin-dependent kinases regulatory subunit-like
          [Strongylocentrotus purpuratus]
          Length = 78

 Score = 99.4 bits (246), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 44/66 (66%), Positives = 54/66 (81%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I YS+KY DD +EYRHVVLP ++ K +P+  L++ETEWR +GVQQS GWVHY IH PEPH
Sbjct: 10 IAYSDKYEDDHFEYRHVVLPTELVKQVPRLHLMTETEWRNLGVQQSPGWVHYMIHNPEPH 69

Query: 64 IMLFRR 69
          I+LFRR
Sbjct: 70 ILLFRR 75


>gi|320164977|gb|EFW41876.1| cyclin-dependent kinase regulatory subunit 1 [Capsaspora
          owczarzaki ATCC 30864]
          Length = 104

 Score = 99.4 bits (246), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 61/82 (74%), Gaps = 9/82 (10%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNR---------LLSETEWRAIGVQQSRGWV 53
          ++ YS+KY+D  +EYRHV++ P++ K+LPK+          LLSE +WR++GVQQSRGW 
Sbjct: 6  EVNYSDKYYDSEFEYRHVIITPEMIKMLPKDETHLTGEPRPLLSEFQWRSMGVQQSRGWE 65

Query: 54 HYAIHRPEPHIMLFRRPLNYQQ 75
          HY  H+P P ++LFRRP+NYQQ
Sbjct: 66 HYLWHKPSPEVLLFRRPINYQQ 87


>gi|449667803|ref|XP_004206649.1| PREDICTED: cyclin-dependent kinases regulatory subunit-like
          [Hydra magnipapillata]
          Length = 76

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 39/69 (56%), Positives = 57/69 (82%)

Query: 2  GQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPE 61
            I YS++Y DD  EYRHV++P ++AK +PK+R L+E EWR++G+QQS+GW+HY  H+PE
Sbjct: 5  NNIYYSDRYADDENEYRHVIIPKELAKKIPKDRYLTEEEWRSLGIQQSQGWIHYMHHKPE 64

Query: 62 PHIMLFRRP 70
          PHI++F+RP
Sbjct: 65 PHILMFKRP 73


>gi|392595530|gb|EIW84853.1| cyclin-dependent kinase regulatory subunit [Coniophora puteana
           RWD-64-598 SS2]
          Length = 109

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 49/98 (50%), Positives = 61/98 (62%), Gaps = 10/98 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN----------RLLSETEWRAIGVQQSR 50
           + +I YS++Y DD YEYRHV+LP  + KL+PK           RLL E EWR IG+ QS 
Sbjct: 12  IEKIHYSDRYSDDIYEYRHVILPKPLLKLVPKEYFDKEQPNCLRLLREDEWRGIGITQSL 71

Query: 51  GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQNILAK 88
           GW HY IH PEPH++LFRRP NY   Q+ Q  +    K
Sbjct: 72  GWEHYEIHAPEPHVLLFRRPKNYVPPQQPQMMKQTRKK 109


>gi|341890566|gb|EGT46501.1| hypothetical protein CAEBREN_04699 [Caenorhabditis brenneri]
          Length = 95

 Score = 98.2 bits (243), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 58/82 (70%)

Query: 6  YSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHIM 65
          YS  Y DD +EYRH+ +  ++A L+P+NRL+SE EWR++G+QQS GWVHY IH PE HI+
Sbjct: 10 YSNTYKDDEFEYRHIHVSKEIATLIPENRLMSEIEWRSLGIQQSPGWVHYMIHGPERHIL 69

Query: 66 LFRRPLNYQQQQENQAQQNILA 87
          LFRRPL    +    ++ N  A
Sbjct: 70 LFRRPLAGGLKAGASSRGNGTA 91


>gi|444317841|ref|XP_004179578.1| hypothetical protein TBLA_0C02490 [Tetrapisispora blattae CBS 6284]
 gi|387512619|emb|CCH60059.1| hypothetical protein TBLA_0C02490 [Tetrapisispora blattae CBS 6284]
          Length = 148

 Score = 98.2 bits (243), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 44/82 (53%), Positives = 58/82 (70%), Gaps = 9/82 (10%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y DDT+EYRHV+LP  + K++P +         R+L+E EWR +GV QS GWVH
Sbjct: 30  IHYSPRYADDTHEYRHVMLPKAMLKVIPNDYFDSETGTLRILTEDEWRGLGVTQSLGWVH 89

Query: 55  YAIHRPEPHIMLFRRPLNYQQQ 76
           Y  H PEPHI+LF+RPLNY+ +
Sbjct: 90  YECHAPEPHILLFKRPLNYEAE 111


>gi|449688217|ref|XP_004211686.1| PREDICTED: cyclin-dependent kinases regulatory subunit-like
          [Hydra magnipapillata]
          Length = 88

 Score = 97.8 bits (242), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 41/72 (56%), Positives = 55/72 (76%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          + ++QYS KY D  YEYRHV++P     L+PK +L++ETEWR IG+QQS GW+HY  H P
Sbjct: 5  VDELQYSAKYDDGEYEYRHVIIPRKYVDLIPKTQLMTETEWRNIGIQQSPGWIHYMFHAP 64

Query: 61 EPHIMLFRRPLN 72
          EPH++LFRR L+
Sbjct: 65 EPHVLLFRRKLS 76


>gi|281205257|gb|EFA79450.1| cyclin-dependent kinases regulatory subunit [Polysphondylium
          pallidum PN500]
          Length = 83

 Score = 97.8 bits (242), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 41/66 (62%), Positives = 53/66 (80%)

Query: 5  QYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHI 64
           YS KY+D  +EYRHV+LP +++ L+PK  LLSE E R +G++QS GWVHYA H+PEPHI
Sbjct: 6  HYSNKYYDSQFEYRHVILPAEISNLIPKGTLLSEEECRKLGIRQSEGWVHYANHKPEPHI 65

Query: 65 MLFRRP 70
          +LFRRP
Sbjct: 66 LLFRRP 71


>gi|389748537|gb|EIM89714.1| CKS-domain-containing protein [Stereum hirsutum FP-91666 SS1]
          Length = 134

 Score = 97.8 bits (242), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 44/81 (54%), Positives = 56/81 (69%), Gaps = 10/81 (12%)

Query: 3   QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN----------RLLSETEWRAIGVQQSRGW 52
           +I YS++Y DD YEYRHV+LP  + K++PK           RLLSE EWR IG+ QS GW
Sbjct: 21  KIHYSDRYSDDQYEYRHVILPKPLFKIIPKEYFSDDDSGTLRLLSEAEWRGIGITQSLGW 80

Query: 53  VHYAIHRPEPHIMLFRRPLNY 73
           VHY +H PEPH++LFRR  N+
Sbjct: 81  VHYEVHAPEPHVLLFRREKNF 101


>gi|367012273|ref|XP_003680637.1| hypothetical protein TDEL_0C05370 [Torulaspora delbrueckii]
 gi|359748296|emb|CCE91426.1| hypothetical protein TDEL_0C05370 [Torulaspora delbrueckii]
          Length = 135

 Score = 97.4 bits (241), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 9/82 (10%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y DDT+EYRHV+LP  + K++P +         R+L+E EWR +GV QS GW H
Sbjct: 28  IHYSPRYSDDTHEYRHVMLPKAMLKMIPSDYFNSETGTLRILTEDEWRGLGVTQSLGWEH 87

Query: 55  YAIHRPEPHIMLFRRPLNYQQQ 76
           +  H PEPHI+LF+RPLNY+Q+
Sbjct: 88  FECHAPEPHILLFKRPLNYEQE 109


>gi|123490251|ref|XP_001325575.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121908476|gb|EAY13352.1| hypothetical protein TVAG_164620 [Trichomonas vaginalis G3]
          Length = 82

 Score = 97.4 bits (241), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 41/69 (59%), Positives = 56/69 (81%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          +  I+YS+KY+DD YEYRHV+LP ++++  PK+ LLSE EWRA+G+Q S GW+HY  H P
Sbjct: 3  VDDIRYSDKYYDDVYEYRHVILPKEISRKDPKDHLLSEEEWRALGIQMSPGWIHYHRHAP 62

Query: 61 EPHIMLFRR 69
          EP+I+LFRR
Sbjct: 63 EPNILLFRR 71


>gi|392567004|gb|EIW60179.1| cyclin-dependent kinase regulatory subunit [Trametes versicolor
           FP-101664 SS1]
          Length = 118

 Score = 97.4 bits (241), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 46/89 (51%), Positives = 58/89 (65%), Gaps = 10/89 (11%)

Query: 3   QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN----------RLLSETEWRAIGVQQSRGW 52
           +I YSE+Y D+ YEYRHV+LP  + K++PK           RLLSE EWR IG+ QS GW
Sbjct: 21  KIHYSERYSDEEYEYRHVILPKPLFKMIPKQFFNQDNTGTLRLLSEEEWRGIGITQSLGW 80

Query: 53  VHYAIHRPEPHIMLFRRPLNYQQQQENQA 81
            HY +H PEPH++LFRR  NY   Q  +A
Sbjct: 81  EHYEVHAPEPHVLLFRRLKNYDAMQAARA 109


>gi|123473818|ref|XP_001320095.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121902893|gb|EAY07872.1| hypothetical protein TVAG_142260 [Trichomonas vaginalis G3]
          Length = 82

 Score = 97.4 bits (241), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 55/69 (79%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          + +I YSEKY+DD YEYRHV LP ++++  PK+ LLSE EWRA+G+Q S GW+HY  H P
Sbjct: 3  VDEIIYSEKYYDDVYEYRHVTLPKEISRKDPKDHLLSEEEWRALGIQMSPGWIHYHRHNP 62

Query: 61 EPHIMLFRR 69
          EP+I+LFRR
Sbjct: 63 EPNILLFRR 71


>gi|182627637|sp|B0G102.1|CKS1_DICDI RecName: Full=Cyclin-dependent kinases regulatory subunit
          Length = 82

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/66 (60%), Positives = 54/66 (81%)

Query: 5  QYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHI 64
           YS KY+DD YEYRHV+LP +++ L+P++ LL+E E R +G++QS GW HYA H+PEPHI
Sbjct: 6  HYSSKYYDDKYEYRHVILPSEISSLIPRDVLLTEDECRKLGIRQSDGWEHYANHKPEPHI 65

Query: 65 MLFRRP 70
          +LFRRP
Sbjct: 66 LLFRRP 71


>gi|330842396|ref|XP_003293165.1| hypothetical protein DICPUDRAFT_58324 [Dictyostelium purpureum]
 gi|325076536|gb|EGC30314.1| hypothetical protein DICPUDRAFT_58324 [Dictyostelium purpureum]
          Length = 82

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 41/67 (61%), Positives = 54/67 (80%)

Query: 6  YSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHIM 65
          YS KY+D  +EYRHV+LPPD++ L+P++ LLSE + R  G++QS GW HYA H+PEPHI+
Sbjct: 7  YSNKYYDSQFEYRHVILPPDISALIPRDVLLSEEDCRRFGIRQSDGWQHYANHKPEPHIL 66

Query: 66 LFRRPLN 72
          LFRRP N
Sbjct: 67 LFRRPHN 73


>gi|268638219|ref|XP_001732965.2| cyclin-dependent kinases regulatory subunit [Dictyostelium
          discoideum AX4]
 gi|256013068|gb|EDR41107.2| cyclin-dependent kinases regulatory subunit [Dictyostelium
          discoideum AX4]
          Length = 82

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/66 (60%), Positives = 54/66 (81%)

Query: 5  QYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHI 64
           YS KY+DD YEYRHV+LP +++ L+P++ LL+E E R +G++QS GW HYA H+PEPHI
Sbjct: 6  HYSSKYYDDKYEYRHVILPSEISSLIPRDVLLTEDECRKLGIRQSDGWEHYANHKPEPHI 65

Query: 65 MLFRRP 70
          +LFRRP
Sbjct: 66 LLFRRP 71


>gi|422293863|gb|EKU21163.1| cyclin-dependent kinase regulatory subunit CKS1 [Nannochloropsis
           gaditana CCMP526]
          Length = 153

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 52/119 (43%), Positives = 62/119 (52%), Gaps = 49/119 (41%)

Query: 3   QIQYSEKYFDDTYEYRHVVLPPD------------------------------------- 25
           +I+YSEKY DD +EYRHV+LP +                                     
Sbjct: 4   RIEYSEKYMDDNHEYRHVILPKEALARHRSGVRATGRNGPGCGLWDVGGSPPLPYALVDP 63

Query: 26  ------------VAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLN 72
                       +A+ LPK RLL+E+EWR IGVQQSRGW HYAIHRPEPHI+LFRRPL 
Sbjct: 64  TPLSFLSHPLQELARSLPKQRLLTESEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLG 122


>gi|313219518|emb|CBY30441.1| unnamed protein product [Oikopleura dioica]
 gi|313226371|emb|CBY21515.1| unnamed protein product [Oikopleura dioica]
          Length = 76

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 52/64 (81%)

Query: 6  YSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHIM 65
          YS+KY D+ +EYRHV +P D  + LPK R +SETEWR +GVQQS+GWVHY +H PEPHI+
Sbjct: 9  YSDKYTDEKFEYRHVHIPKDWVRRLPKERTMSETEWRELGVQQSQGWVHYMVHDPEPHIL 68

Query: 66 LFRR 69
          LFRR
Sbjct: 69 LFRR 72


>gi|296208171|ref|XP_002750969.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1-like
          [Callithrix jacchus]
          Length = 82

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/72 (62%), Positives = 56/72 (77%), Gaps = 3/72 (4%)

Query: 3  QIQYSEKYFDDTYEYRH---VVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHR 59
          QI YS+KY D+ +EYRH   V+LP D+ KL+PK   +SE+EWR +GVQQS+GWV Y IH 
Sbjct: 5  QIYYSDKYDDEEFEYRHYRHVMLPKDITKLVPKTHWMSESEWRNLGVQQSQGWVRYVIHE 64

Query: 60 PEPHIMLFRRPL 71
          PEPHI+LF RPL
Sbjct: 65 PEPHILLFWRPL 76


>gi|358055628|dbj|GAA98459.1| hypothetical protein E5Q_05145 [Mixia osmundae IAM 14324]
          Length = 238

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 52/69 (75%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
           I YS +Y DD YEYRHV+LP ++AK LP +RL  E EWR +G++QS GW HY  H PEPH
Sbjct: 170 IFYSARYSDDEYEYRHVILPKELAKYLPLDRLAEENEWRGLGIRQSPGWFHYLRHAPEPH 229

Query: 64  IMLFRRPLN 72
           IMLF+R L+
Sbjct: 230 IMLFKRQLD 238


>gi|293342691|ref|XP_002725290.1| PREDICTED: cyclin-dependent kinases regulatory subunit 2-like
          [Rattus norvegicus]
 gi|293354510|ref|XP_002728508.1| PREDICTED: cyclin-dependent kinases regulatory subunit 2-like
          [Rattus norvegicus]
          Length = 79

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/75 (60%), Positives = 57/75 (76%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KYFD+ YEY HV+LP +++K + K  L+SE EWR +GVQQS GW H  IH PEP
Sbjct: 5  QIYYSDKYFDEQYEYWHVMLPRELSKQVLKTHLMSEEEWRRLGVQQSLGWAHDMIHEPEP 64

Query: 63 HIMLFRRPLNYQQQQ 77
          H +LFRRPL  +QQ+
Sbjct: 65 HSLLFRRPLPKEQQK 79


>gi|440293095|gb|ELP86257.1| cyclin-dependent kinase regulatory subunit, putative [Entamoeba
          invadens IP1]
          Length = 76

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 40/70 (57%), Positives = 56/70 (80%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          +  I YS++Y D  +EYRHV+LP D+AK +PK+RL++E EWR +GVQQS GW+HY   +P
Sbjct: 3  VKDIYYSDRYKDPQFEYRHVILPDDIAKKVPKDRLMTEDEWRKLGVQQSLGWIHYDWFKP 62

Query: 61 EPHIMLFRRP 70
          EP+++LFRRP
Sbjct: 63 EPNVLLFRRP 72


>gi|149237971|ref|XP_001524862.1| cyclin-dependent kinases regulatory subunit [Lodderomyces
           elongisporus NRRL YB-4239]
 gi|146451459|gb|EDK45715.1| cyclin-dependent kinases regulatory subunit [Lodderomyces
           elongisporus NRRL YB-4239]
          Length = 103

 Score = 95.9 bits (237), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 43/81 (53%), Positives = 58/81 (71%), Gaps = 9/81 (11%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y DDT+EYRHV+LP ++ K++P++         R+L E EWR +G+ QS GWVH
Sbjct: 23  IHYSPRYSDDTHEYRHVMLPKNMLKVIPQDYFNPETGTLRILLEEEWRGLGITQSLGWVH 82

Query: 55  YAIHRPEPHIMLFRRPLNYQQ 75
           Y  H PEPHI+LF+RP+NY Q
Sbjct: 83  YETHAPEPHILLFKRPINYGQ 103


>gi|448515683|ref|XP_003867391.1| Cks1 protein [Candida orthopsilosis Co 90-125]
 gi|380351730|emb|CCG21953.1| Cks1 protein [Candida orthopsilosis]
          Length = 103

 Score = 95.9 bits (237), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 43/81 (53%), Positives = 58/81 (71%), Gaps = 9/81 (11%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y DDT+EYRHV+LP ++ K++P++         R+L E EWR +G+ QS GWVH
Sbjct: 23  IHYSPRYSDDTHEYRHVMLPKNMLKVIPQDYFNPETGTLRILLEEEWRGLGITQSLGWVH 82

Query: 55  YAIHRPEPHIMLFRRPLNYQQ 75
           Y  H PEPHI+LF+RP+NY Q
Sbjct: 83  YETHAPEPHILLFKRPINYGQ 103


>gi|193632094|ref|XP_001943166.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1-like
          [Acyrthosiphon pisum]
          Length = 82

 Score = 95.9 bits (237), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 43/79 (54%), Positives = 55/79 (69%)

Query: 2  GQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPE 61
          G IQYS KY D+ Y YRHV+LP D+AK +PK  L++ETEWR +G+Q + GW+HY  + PE
Sbjct: 4  GDIQYSTKYEDNMYIYRHVILPEDMAKHVPKTHLMTETEWRNLGIQMTSGWMHYMRYDPE 63

Query: 62 PHIMLFRRPLNYQQQQENQ 80
          PHI+ FRR  N    Q  Q
Sbjct: 64 PHIVPFRRLKNANDSQTTQ 82


>gi|164657544|ref|XP_001729898.1| hypothetical protein MGL_2884 [Malassezia globosa CBS 7966]
 gi|159103792|gb|EDP42684.1| hypothetical protein MGL_2884 [Malassezia globosa CBS 7966]
          Length = 124

 Score = 95.9 bits (237), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 47/98 (47%), Positives = 62/98 (63%), Gaps = 10/98 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN----------RLLSETEWRAIGVQQSR 50
           + +I YSEKY DD +EYRHV+LP    K +PK+          R+LS+ EWR IG+ QS 
Sbjct: 11  VDRIHYSEKYSDDNWEYRHVILPKPFLKRIPKSYFDPEEPGVLRILSDAEWRGIGITQSL 70

Query: 51  GWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQNILAK 88
           GW HY +H PEPHI+LFRR  +YQ +   Q + +  AK
Sbjct: 71  GWEHYEVHAPEPHILLFRREKDYQAKYGPQGKPSDAAK 108


>gi|366998223|ref|XP_003683848.1| hypothetical protein TPHA_0A03370 [Tetrapisispora phaffii CBS 4417]
 gi|357522143|emb|CCE61414.1| hypothetical protein TPHA_0A03370 [Tetrapisispora phaffii CBS 4417]
          Length = 122

 Score = 95.5 bits (236), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 41/82 (50%), Positives = 58/82 (70%), Gaps = 9/82 (10%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y DDT+EYRHV+LP  + K++P +         R+L+E EWR +G+ QS GWVH
Sbjct: 29  IHYSPRYSDDTHEYRHVMLPKAMLKVIPSDYFNSETGTLRILTEDEWRGLGITQSLGWVH 88

Query: 55  YAIHRPEPHIMLFRRPLNYQQQ 76
           +  H PEPHI+LF+RP+NY+ +
Sbjct: 89  FECHAPEPHILLFKRPINYEAE 110


>gi|254580807|ref|XP_002496389.1| ZYRO0C17248p [Zygosaccharomyces rouxii]
 gi|238939280|emb|CAR27456.1| ZYRO0C17248p [Zygosaccharomyces rouxii]
          Length = 140

 Score = 95.5 bits (236), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 9/83 (10%)

Query: 3   QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWV 53
            I YS +Y DDT+EYRHV+LP  + K++P +         R+L+E EWR +GV QS GW 
Sbjct: 27  SIHYSPRYSDDTHEYRHVMLPKAMLKVIPSDYFNSETGTLRILTEDEWRGLGVTQSLGWE 86

Query: 54  HYAIHRPEPHIMLFRRPLNYQQQ 76
           HY  H PEPHI+LF+RPLNY+ +
Sbjct: 87  HYECHAPEPHILLFKRPLNYETE 109


>gi|354547261|emb|CCE43995.1| hypothetical protein CPAR2_502200 [Candida parapsilosis]
          Length = 103

 Score = 95.5 bits (236), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 43/81 (53%), Positives = 58/81 (71%), Gaps = 9/81 (11%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y DDT+EYRHV+LP ++ K++P++         R+L E EWR +G+ QS GWVH
Sbjct: 23  IHYSPRYNDDTHEYRHVMLPKNMLKVIPQDYFNPETGTLRILLEEEWRGLGITQSLGWVH 82

Query: 55  YAIHRPEPHIMLFRRPLNYQQ 75
           Y  H PEPHI+LF+RP+NY Q
Sbjct: 83  YETHAPEPHILLFKRPINYGQ 103


>gi|50305891|ref|XP_452906.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49642039|emb|CAH01757.1| KLLA0C15807p [Kluyveromyces lactis]
          Length = 132

 Score = 95.5 bits (236), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 42/82 (51%), Positives = 57/82 (69%), Gaps = 9/82 (10%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y DDT+EYRHV+LP  + K++P +         R+L+E EWR +G+ QS GW H
Sbjct: 27  IHYSPRYSDDTHEYRHVMLPKAMLKVIPSDYFNGDTGTLRILTEDEWRGLGITQSLGWEH 86

Query: 55  YAIHRPEPHIMLFRRPLNYQQQ 76
           Y  H PEPHI+LF+RPLNY+ +
Sbjct: 87  YECHAPEPHILLFKRPLNYEAE 108


>gi|365982447|ref|XP_003668057.1| hypothetical protein NDAI_0A06600 [Naumovozyma dairenensis CBS 421]
 gi|343766823|emb|CCD22814.1| hypothetical protein NDAI_0A06600 [Naumovozyma dairenensis CBS 421]
          Length = 145

 Score = 95.5 bits (236), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 57/83 (68%), Gaps = 9/83 (10%)

Query: 3   QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWV 53
            I YS +Y DDT+EYRHV+LP  + K++P +         R+L+E EWR +G+ QS GW 
Sbjct: 27  SIHYSPRYSDDTHEYRHVMLPKAMLKVIPSDYFNSDVGTLRILTEDEWRGLGITQSLGWE 86

Query: 54  HYAIHRPEPHIMLFRRPLNYQQQ 76
           HY  H PEPHI+LF+RPLNY+ +
Sbjct: 87  HYECHAPEPHILLFKRPLNYEAE 109


>gi|45185339|ref|NP_983056.1| ABR109Cp [Ashbya gossypii ATCC 10895]
 gi|44980997|gb|AAS50880.1| ABR109Cp [Ashbya gossypii ATCC 10895]
 gi|374106259|gb|AEY95169.1| FABR109Cp [Ashbya gossypii FDAG1]
          Length = 119

 Score = 95.5 bits (236), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 44/89 (49%), Positives = 59/89 (66%), Gaps = 9/89 (10%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y DDT+EYRHV+LP  + K++P +         R+L+E EWR +GV QS GW H
Sbjct: 27  IHYSPRYSDDTHEYRHVMLPKAMLKVIPSDYFNSETGTLRILTEDEWRGLGVTQSLGWEH 86

Query: 55  YAIHRPEPHIMLFRRPLNYQQQQENQAQQ 83
           Y  H PEPHI+LF+RPLN++ +     QQ
Sbjct: 87  YECHAPEPHILLFKRPLNFEAELRAAQQQ 115


>gi|148681025|gb|EDL12972.1| mCG117418 [Mus musculus]
          Length = 111

 Score = 95.1 bits (235), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 44/81 (54%), Positives = 58/81 (71%), Gaps = 4/81 (4%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+ Y D+ +EYRHV+LP D+AKL+PK  L+SE+EWR +GVQQS+GW+HY IH PEP
Sbjct: 5  QIYYSDIYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRKLGVQQSQGWLHYMIHEPEP 64

Query: 63 HIMLFRRPLNYQQQQENQAQQ 83
          H      P    + Q N+A +
Sbjct: 65 HCSGGHCP----RSQRNEASE 81


>gi|50285549|ref|XP_445203.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524507|emb|CAG58107.1| unnamed protein product [Candida glabrata]
          Length = 128

 Score = 95.1 bits (235), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 42/82 (51%), Positives = 57/82 (69%), Gaps = 9/82 (10%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y DDT+EYRHV+LP  + K++P +         R+L+E EWR +G+ QS GW H
Sbjct: 28  IHYSPRYSDDTHEYRHVMLPKAMLKVIPSDYFNSEVGTLRILTEDEWRGLGITQSLGWEH 87

Query: 55  YAIHRPEPHIMLFRRPLNYQQQ 76
           Y  H PEPHI+LF+RPLNY+ +
Sbjct: 88  YECHAPEPHILLFKRPLNYEAE 109


>gi|401626830|gb|EJS44750.1| cks1p [Saccharomyces arboricola H-6]
          Length = 153

 Score = 95.1 bits (235), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 56/83 (67%), Gaps = 9/83 (10%)

Query: 3   QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWV 53
            I YS +Y DD YEYRHV+LP  + K++P +         R+L+E EWR +G+ QS GW 
Sbjct: 27  SIHYSPRYSDDNYEYRHVMLPKAMLKVIPSDYFNSEVGTLRILTEDEWRGLGITQSLGWE 86

Query: 54  HYAIHRPEPHIMLFRRPLNYQQQ 76
           HY  H PEPHI+LF+RPLNY+ +
Sbjct: 87  HYECHAPEPHILLFKRPLNYEAE 109


>gi|323310086|gb|EGA63280.1| Cks1p [Saccharomyces cerevisiae FostersO]
          Length = 159

 Score = 95.1 bits (235), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 56/83 (67%), Gaps = 9/83 (10%)

Query: 3   QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWV 53
            I YS +Y DD YEYRHV+LP  + K++P +         R+L+E EWR +G+ QS GW 
Sbjct: 27  SIHYSPRYSDDNYEYRHVMLPKAMLKVIPSDYFNSEVGTLRILTEDEWRGLGITQSLGWE 86

Query: 54  HYAIHRPEPHIMLFRRPLNYQQQ 76
           HY  H PEPHI+LF+RPLNY+ +
Sbjct: 87  HYECHAPEPHILLFKRPLNYEAE 109


>gi|401837439|gb|EJT41368.1| CKS1-like protein [Saccharomyces kudriavzevii IFO 1802]
          Length = 145

 Score = 94.7 bits (234), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 56/83 (67%), Gaps = 9/83 (10%)

Query: 3   QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWV 53
            I YS +Y DD YEYRHV+LP  + K++P +         R+L+E EWR +G+ QS GW 
Sbjct: 27  SIHYSPRYSDDNYEYRHVMLPKAMLKVIPSDYFNSEVGTLRILTEDEWRGLGITQSLGWE 86

Query: 54  HYAIHRPEPHIMLFRRPLNYQQQ 76
           HY  H PEPHI+LF+RPLNY+ +
Sbjct: 87  HYECHAPEPHILLFKRPLNYEAE 109


>gi|323305964|gb|EGA59699.1| Cks1p [Saccharomyces cerevisiae FostersB]
          Length = 162

 Score = 94.7 bits (234), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 42/82 (51%), Positives = 56/82 (68%), Gaps = 9/82 (10%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y DD YEYRHV+LP  + K++P +         R+L+E EWR +G+ QS GW H
Sbjct: 28  IHYSPRYSDDNYEYRHVMLPKAMLKVIPSDYFNSEVGTLRILTEDEWRGLGITQSLGWEH 87

Query: 55  YAIHRPEPHIMLFRRPLNYQQQ 76
           Y  H PEPHI+LF+RPLNY+ +
Sbjct: 88  YECHAPEPHILLFKRPLNYEAE 109


>gi|398364999|ref|NP_009693.3| Cks1p [Saccharomyces cerevisiae S288c]
 gi|116484|sp|P20486.1|CKS1_YEAST RecName: Full=Cyclin-dependent kinases regulatory subunit; AltName:
           Full=Cell division control protein CKS1
 gi|10120613|pdb|1QB3|A Chain A, Crystal Structure Of The Cell Cycle Regulatory Protein
           Cks1
 gi|10120614|pdb|1QB3|B Chain B, Crystal Structure Of The Cell Cycle Regulatory Protein
           Cks1
 gi|10120615|pdb|1QB3|C Chain C, Crystal Structure Of The Cell Cycle Regulatory Protein
           Cks1
 gi|172179|gb|AAA34879.1| protein kinase [Saccharomyces cerevisiae]
 gi|496865|emb|CAA53493.1| CKS1 [Saccharomyces cerevisiae]
 gi|536428|emb|CAA85092.1| CKS1 [Saccharomyces cerevisiae]
 gi|45270262|gb|AAS56512.1| YBR135W [Saccharomyces cerevisiae]
 gi|151946525|gb|EDN64747.1| cyclin-dependent protein kinase subunit [Saccharomyces cerevisiae
           YJM789]
 gi|256268963|gb|EEU04308.1| Cks1p [Saccharomyces cerevisiae JAY291]
 gi|285810466|tpg|DAA07251.1| TPA: Cks1p [Saccharomyces cerevisiae S288c]
 gi|290878150|emb|CBK39209.1| Cks1p [Saccharomyces cerevisiae EC1118]
 gi|323334591|gb|EGA75965.1| Cks1p [Saccharomyces cerevisiae AWRI796]
 gi|323338677|gb|EGA79893.1| Cks1p [Saccharomyces cerevisiae Vin13]
 gi|323349739|gb|EGA83954.1| Cks1p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323356086|gb|EGA87891.1| Cks1p [Saccharomyces cerevisiae VL3]
 gi|349576510|dbj|GAA21681.1| K7_Cks1p [Saccharomyces cerevisiae Kyokai no. 7]
 gi|365766852|gb|EHN08341.1| Cks1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
 gi|392300976|gb|EIW12065.1| Cks1p [Saccharomyces cerevisiae CEN.PK113-7D]
 gi|1582521|prf||2118402J CKS1 gene
          Length = 150

 Score = 94.7 bits (234), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 56/83 (67%), Gaps = 9/83 (10%)

Query: 3   QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWV 53
            I YS +Y DD YEYRHV+LP  + K++P +         R+L+E EWR +G+ QS GW 
Sbjct: 27  SIHYSPRYSDDNYEYRHVMLPKAMLKVIPSDYFNSEVGTLRILTEDEWRGLGITQSLGWE 86

Query: 54  HYAIHRPEPHIMLFRRPLNYQQQ 76
           HY  H PEPHI+LF+RPLNY+ +
Sbjct: 87  HYECHAPEPHILLFKRPLNYEAE 109


>gi|190408710|gb|EDV11975.1| Cdc28 protein kinase subunit [Saccharomyces cerevisiae RM11-1a]
          Length = 142

 Score = 94.7 bits (234), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 56/83 (67%), Gaps = 9/83 (10%)

Query: 3   QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWV 53
            I YS +Y DD YEYRHV+LP  + K++P +         R+L+E EWR +G+ QS GW 
Sbjct: 27  SIHYSPRYSDDNYEYRHVMLPKAMLKVIPSDYFNSEVGTLRILTEDEWRGLGITQSLGWE 86

Query: 54  HYAIHRPEPHIMLFRRPLNYQQQ 76
           HY  H PEPHI+LF+RPLNY+ +
Sbjct: 87  HYECHAPEPHILLFKRPLNYEAE 109


>gi|328719845|ref|XP_001949496.2| PREDICTED: cyclin-dependent kinases regulatory subunit-like
           [Acyrthosiphon pisum]
          Length = 110

 Score = 94.7 bits (234), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 43/67 (64%), Positives = 50/67 (74%)

Query: 3   QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
            I+YS KY DDTY YRHV+LP D+AK LP   L++ETEWR IG+Q S GW HY  H PEP
Sbjct: 37  DIKYSAKYEDDTYVYRHVILPEDLAKKLPITHLMTETEWRNIGIQMSTGWKHYMRHGPEP 96

Query: 63  HIMLFRR 69
           HI+ FRR
Sbjct: 97  HIVPFRR 103


>gi|393245623|gb|EJD53133.1| CKS-domain-containing protein [Auricularia delicata TFB-10046 SS5]
          Length = 115

 Score = 94.7 bits (234), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 45/96 (46%), Positives = 59/96 (61%), Gaps = 10/96 (10%)

Query: 3   QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN----------RLLSETEWRAIGVQQSRGW 52
           +I YSE+Y DD YEYRHV+LP  + K LPK+          RLL+E EWR IG+ QS GW
Sbjct: 18  KIHYSERYSDDKYEYRHVILPKGMLKYLPKHLFSADDPNVLRLLTENEWRGIGITQSLGW 77

Query: 53  VHYAIHRPEPHIMLFRRPLNYQQQQENQAQQNILAK 88
            HY +H PEPH++LFRR   +       A+ +  A+
Sbjct: 78  EHYEVHAPEPHVLLFRRDKAFDMNAAMAARASGGAR 113


>gi|366996897|ref|XP_003678211.1| hypothetical protein NCAS_0I02010 [Naumovozyma castellii CBS 4309]
 gi|342304082|emb|CCC71869.1| hypothetical protein NCAS_0I02010 [Naumovozyma castellii CBS 4309]
          Length = 141

 Score = 94.7 bits (234), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 42/81 (51%), Positives = 56/81 (69%), Gaps = 9/81 (11%)

Query: 3   QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWV 53
            I YS +Y DDT+EYRHV+LP  + K++P +         R+L+E EWR +G+ QS GW 
Sbjct: 27  SIHYSPRYSDDTHEYRHVMLPKAMLKVIPSDYFNSEVGTLRILTEDEWRGLGITQSLGWE 86

Query: 54  HYAIHRPEPHIMLFRRPLNYQ 74
           HY  H PEPHI+LF+RPLNY+
Sbjct: 87  HYECHAPEPHILLFKRPLNYE 107


>gi|302690360|ref|XP_003034859.1| hypothetical protein SCHCODRAFT_13999 [Schizophyllum commune
          H4-8]
 gi|300108555|gb|EFI99956.1| hypothetical protein SCHCODRAFT_13999 [Schizophyllum commune
          H4-8]
          Length = 119

 Score = 94.4 bits (233), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 10/83 (12%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN----------RLLSETEWRAIGVQQSR 50
          + +I YS++Y DD YEYRHV+LP  + K++PK+          RLLSE EWR IG+ QS 
Sbjct: 15 IDRIHYSDRYSDDVYEYRHVILPKQLLKMIPKSFFSPDDSGVLRLLSEQEWRGIGITQSL 74

Query: 51 GWVHYAIHRPEPHIMLFRRPLNY 73
          GW HY +H PEPH++LFRR  +Y
Sbjct: 75 GWEHYEVHAPEPHVLLFRRRKDY 97


>gi|363753586|ref|XP_003647009.1| hypothetical protein Ecym_5440 [Eremothecium cymbalariae
           DBVPG#7215]
 gi|356890645|gb|AET40192.1| hypothetical protein Ecym_5440 [Eremothecium cymbalariae
           DBVPG#7215]
          Length = 125

 Score = 94.4 bits (233), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 42/81 (51%), Positives = 56/81 (69%), Gaps = 9/81 (11%)

Query: 3   QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWV 53
            I YS +Y DDT+EYRHV+LP  + K++P +         R+L+E EWR +GV QS GW 
Sbjct: 26  SIHYSPRYSDDTHEYRHVMLPKAMLKVIPSDYFNSETGTLRILTEDEWRGLGVTQSLGWE 85

Query: 54  HYAIHRPEPHIMLFRRPLNYQ 74
           HY  H PEPHI+LF+RPLN++
Sbjct: 86  HYECHAPEPHILLFKRPLNFE 106


>gi|156397317|ref|XP_001637838.1| predicted protein [Nematostella vectensis]
 gi|156224953|gb|EDO45775.1| predicted protein [Nematostella vectensis]
          Length = 78

 Score = 94.4 bits (233), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 55/69 (79%), Gaps = 1/69 (1%)

Query: 4  IQYSEKYFDDT-YEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          I YS KY DDT YEYRHV++P  +AK +PK+RL+ E EWR +G+QQS+GW  Y IH PEP
Sbjct: 5  IFYSTKYEDDTGYEYRHVIVPKVLAKKIPKDRLMREDEWRGMGIQQSQGWQQYMIHHPEP 64

Query: 63 HIMLFRRPL 71
          H++LF+RP+
Sbjct: 65 HVLLFKRPV 73


>gi|452979341|gb|EME79103.1| hypothetical protein MYCFIDRAFT_190145 [Pseudocercospora fijiensis
           CIRAD86]
          Length = 117

 Score = 94.4 bits (233), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 43/87 (49%), Positives = 57/87 (65%), Gaps = 9/87 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y DD +EYRHV LP  + K +PK          +LL E EWR +G+ QS G
Sbjct: 31  IDSIHYSSRYSDDHFEYRHVQLPKQMLKAIPKEYFDGARGTLKLLWEDEWRGLGITQSLG 90

Query: 52  WVHYAIHRPEPHIMLFRRPLNYQQQQE 78
           W HY +H PEPHI+LF+RP+N+Q QQ+
Sbjct: 91  WEHYEVHEPEPHILLFKRPINFQAQQQ 117


>gi|451849993|gb|EMD63296.1| hypothetical protein COCSADRAFT_145663 [Cochliobolus sativus
           ND90Pr]
 gi|452001814|gb|EMD94273.1| hypothetical protein COCHEDRAFT_1130744 [Cochliobolus
           heterostrophus C5]
          Length = 117

 Score = 94.4 bits (233), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 44/80 (55%), Positives = 55/80 (68%), Gaps = 9/80 (11%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y DD YEYRHV LP  + K +PK+         +LL E EWRA+G+ QS GW H
Sbjct: 34  IHYSARYSDDVYEYRHVQLPKQMLKAIPKDYFDGARGTLKLLWEEEWRALGITQSLGWEH 93

Query: 55  YAIHRPEPHIMLFRRPLNYQ 74
           Y +H PEPHI+LF+RP+NYQ
Sbjct: 94  YEVHEPEPHILLFKRPINYQ 113


>gi|50423397|ref|XP_460281.1| DEHA2E22550p [Debaryomyces hansenii CBS767]
 gi|49655949|emb|CAG88563.1| DEHA2E22550p [Debaryomyces hansenii CBS767]
          Length = 102

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 42/81 (51%), Positives = 56/81 (69%), Gaps = 9/81 (11%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y DDT+EYRHV+LP ++ K +P++         R+L E EWR +G+ QS GW H
Sbjct: 22  IHYSPRYSDDTHEYRHVMLPKNMLKAIPQDYFNPETGTLRILQEEEWRGLGITQSLGWAH 81

Query: 55  YAIHRPEPHIMLFRRPLNYQQ 75
           Y  H PEPHI+LF+RP+NY Q
Sbjct: 82  YETHAPEPHILLFKRPINYGQ 102


>gi|358390354|gb|EHK39760.1| hypothetical protein TRIATDRAFT_303053 [Trichoderma atroviride IMI
           206040]
          Length = 115

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/86 (53%), Positives = 58/86 (67%), Gaps = 9/86 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I+YSE+Y DD YEYRHV LP  + K +PK          +LL E EWRA+G+ QS G
Sbjct: 30  IDAIRYSERYHDDEYEYRHVQLPKLMLKAIPKEYHDSAKGTLKLLWEEEWRAMGMTQSLG 89

Query: 52  WVHYAIHRPEPHIMLFRRPLNYQQQQ 77
           W HY +H PEPHI+LF+RPL+YQ  Q
Sbjct: 90  WEHYEVHEPEPHILLFKRPLDYQPPQ 115


>gi|358059463|dbj|GAA94869.1| hypothetical protein E5Q_01523 [Mixia osmundae IAM 14324]
          Length = 110

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 42/76 (55%), Positives = 54/76 (71%), Gaps = 10/76 (13%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN----------RLLSETEWRAIGVQQSRGWV 53
          I YSE+Y DDT+EYRHV+LP  + K+LPK+          R+L+E EWR IG+ QS GW 
Sbjct: 18 IHYSERYSDDTHEYRHVILPKGLLKMLPKHMFSSEDSGVLRILTEQEWRGIGITQSLGWE 77

Query: 54 HYAIHRPEPHIMLFRR 69
          H+ +H PEPHI+LFRR
Sbjct: 78 HFEVHAPEPHILLFRR 93


>gi|126136569|ref|XP_001384808.1| Cyclin-dependent kinases regulatory subunit (Cell division control
           protein CKS1) [Scheffersomyces stipitis CBS 6054]
 gi|126092030|gb|ABN66779.1| Cyclin-dependent kinases regulatory subunit (Cell division control
           protein CKS1) [Scheffersomyces stipitis CBS 6054]
          Length = 102

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 42/81 (51%), Positives = 57/81 (70%), Gaps = 9/81 (11%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y DDT+EYRHV+LP ++ K++P++         R+L E EWR +G+ QS GW H
Sbjct: 22  IHYSPRYSDDTHEYRHVMLPKNMLKVIPQDYFNPETGTLRILLEEEWRGLGITQSLGWSH 81

Query: 55  YAIHRPEPHIMLFRRPLNYQQ 75
           Y  H PEPHI+LF+RP+NY Q
Sbjct: 82  YETHAPEPHILLFKRPINYGQ 102


>gi|294955069|ref|XP_002788391.1| peptidyl-prolyl cis-trans isomerase D, putative [Perkinsus marinus
           ATCC 50983]
 gi|239903791|gb|EER20187.1| peptidyl-prolyl cis-trans isomerase D, putative [Perkinsus marinus
           ATCC 50983]
          Length = 336

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/78 (57%), Positives = 52/78 (66%), Gaps = 15/78 (19%)

Query: 10  YFDDTYEYRHVVLPPDVAKLL---------------PKNRLLSETEWRAIGVQQSRGWVH 54
           Y DD YEYRHV+LP  +AK +                + RLLSE+EWR +GVQQSRGWVH
Sbjct: 234 YVDDKYEYRHVILPKRIAKEMFRIFQAEAQMRGRPTAEPRLLSESEWRGLGVQQSRGWVH 293

Query: 55  YAIHRPEPHIMLFRRPLN 72
           Y  HRPEPHI+LFRRPL 
Sbjct: 294 YENHRPEPHILLFRRPLG 311


>gi|430812210|emb|CCJ30363.1| unnamed protein product, partial [Pneumocystis jirovecii]
          Length = 118

 Score = 93.6 bits (231), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 42/90 (46%), Positives = 58/90 (64%), Gaps = 9/90 (10%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y DDT+EYRHV+LP  + K++PK+         ++L E EWR +G+ QS GW H
Sbjct: 28  IHYSTRYSDDTHEYRHVILPKSMLKVIPKDYFNQETGTLKILHEEEWRGLGITQSLGWQH 87

Query: 55  YAIHRPEPHIMLFRRPLNYQQQQENQAQQN 84
           Y IH PEPHI+LF+R  ++Q +   Q  Q 
Sbjct: 88  YEIHVPEPHILLFKRECDHQAKSAQQVTQK 117


>gi|241955903|ref|XP_002420672.1| cyclin-dependent protein kinase regulatory subunit and adaptor,
          putative [Candida dubliniensis CD36]
 gi|223644014|emb|CAX41755.1| cyclin-dependent protein kinase regulatory subunit and adaptor,
          putative [Candida dubliniensis CD36]
          Length = 102

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 41/78 (52%), Positives = 55/78 (70%), Gaps = 9/78 (11%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
          I YS +Y DD+YEYRHV+LP ++ K +P++         R+L+E EWR +G+ QS GW H
Sbjct: 22 IHYSPRYSDDSYEYRHVMLPKNMLKAIPQDYFNAETGTLRILTEEEWRGLGITQSLGWAH 81

Query: 55 YAIHRPEPHIMLFRRPLN 72
          Y  H PEPHI+LF+RPLN
Sbjct: 82 YETHAPEPHILLFKRPLN 99


>gi|339232752|ref|XP_003381493.1| conserved domain protein [Trichinella spiralis]
 gi|316979698|gb|EFV62453.1| conserved domain protein [Trichinella spiralis]
          Length = 119

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 54/68 (79%), Gaps = 1/68 (1%)

Query: 3  QIQYSEKYFDDT-YEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPE 61
          +I YSEKY D+  YEYRHV LP  + +L+P+ RL++E+EWR IG+QQSRGW HY I  PE
Sbjct: 25 EIYYSEKYEDEKGYEYRHVHLPKSLVRLVPRGRLMTESEWRRIGIQQSRGWEHYMIFNPE 84

Query: 62 PHIMLFRR 69
          PH++LFRR
Sbjct: 85 PHVILFRR 92


>gi|344301875|gb|EGW32180.1| cyclin-dependent kinases regulatory subunit [Spathaspora
           passalidarum NRRL Y-27907]
          Length = 102

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/81 (51%), Positives = 57/81 (70%), Gaps = 9/81 (11%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y DDT+EYRHV+LP ++ K++P++         R+L E EWR +G+ QS GW H
Sbjct: 22  IHYSPRYNDDTHEYRHVMLPKNMLKVIPQDYFNSETGTLRILLEEEWRGLGITQSLGWEH 81

Query: 55  YAIHRPEPHIMLFRRPLNYQQ 75
           Y  H PEPHI+LF+RP+NY Q
Sbjct: 82  YETHAPEPHILLFKRPINYGQ 102


>gi|310789913|gb|EFQ25446.1| cyclin-dependent kinase regulatory subunit [Glomerella graminicola
           M1.001]
          Length = 112

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 45/86 (52%), Positives = 56/86 (65%), Gaps = 9/86 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y D  YEYRHV LP  + K +PK+         +LL E EWRA+G+ QS G
Sbjct: 27  IDSIHYSARYSDSEYEYRHVQLPKAMLKAIPKDYHDSSHGTLKLLWEEEWRALGITQSLG 86

Query: 52  WVHYAIHRPEPHIMLFRRPLNYQQQQ 77
           W HY +H PEPHI+LF+RPLNYQ  Q
Sbjct: 87  WEHYEVHEPEPHILLFKRPLNYQPPQ 112


>gi|410084100|ref|XP_003959627.1| hypothetical protein KAFR_0K01380 [Kazachstania africana CBS 2517]
 gi|372466219|emb|CCF60492.1| hypothetical protein KAFR_0K01380 [Kazachstania africana CBS 2517]
          Length = 142

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 41/82 (50%), Positives = 56/82 (68%), Gaps = 9/82 (10%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y DDT EYRHV+LP  + K++P +         R+L+E EWR +G+ QS GW H
Sbjct: 28  IHYSPRYSDDTNEYRHVMLPKAMLKVIPSDYFNSEVGTLRILTEDEWRGLGITQSLGWEH 87

Query: 55  YAIHRPEPHIMLFRRPLNYQQQ 76
           Y  H PEPHI+LF+RPLN++ +
Sbjct: 88  YECHAPEPHILLFKRPLNFEAE 109


>gi|398397517|ref|XP_003852216.1| hypothetical protein MYCGRDRAFT_104544 [Zymoseptoria tritici
           IPO323]
 gi|339472097|gb|EGP87192.1| hypothetical protein MYCGRDRAFT_104544 [Zymoseptoria tritici
           IPO323]
          Length = 114

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/83 (51%), Positives = 55/83 (66%), Gaps = 9/83 (10%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y DD YEYRHV LP  + K +PK+         +LL E EWR +G+ QS GW H
Sbjct: 32  IHYSSRYNDDQYEYRHVQLPKQMLKAIPKDYFDGGRGTLKLLWEDEWRGLGITQSLGWEH 91

Query: 55  YAIHRPEPHIMLFRRPLNYQQQQ 77
           Y +H PEPHI+LF+RP+N+Q  Q
Sbjct: 92  YEVHEPEPHILLFKRPMNFQAGQ 114


>gi|317157877|ref|XP_003190899.1| cyclin-dependent kinase regulatory subunit [Aspergillus oryzae
           RIB40]
 gi|317157879|ref|XP_001826627.2| cyclin-dependent kinase regulatory subunit [Aspergillus oryzae
           RIB40]
          Length = 114

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/83 (51%), Positives = 56/83 (67%), Gaps = 9/83 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y DD +EYRHV LP ++ K +P +         +LL E EWRA+G+ QS G
Sbjct: 27  IDSIHYSARYSDDQFEYRHVQLPKNMLKKIPADYFDSSKGTLKLLWEEEWRALGITQSLG 86

Query: 52  WVHYAIHRPEPHIMLFRRPLNYQ 74
           W HY +H PEPHI+LF+RPLNYQ
Sbjct: 87  WEHYEVHEPEPHILLFKRPLNYQ 109


>gi|299753085|ref|XP_001833054.2| cyclin-dependent kinase regulatory subunit [Coprinopsis cinerea
          okayama7#130]
 gi|298410137|gb|EAU88743.2| cyclin-dependent kinase regulatory subunit [Coprinopsis cinerea
          okayama7#130]
          Length = 108

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 10/81 (12%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN----------RLLSETEWRAIGVQQSRGW 52
          +I YS++Y DD +EYRHV+LP  + K++PK           RLL+E EWR IG+ QS GW
Sbjct: 11 KIHYSDRYSDDEFEYRHVILPKQLLKMIPKEYFNPDESGTLRLLAEHEWRGIGITQSLGW 70

Query: 53 VHYAIHRPEPHIMLFRRPLNY 73
           HY +H PEPH++LFRR  NY
Sbjct: 71 EHYEVHAPEPHVLLFRRAKNY 91


>gi|403214071|emb|CCK68572.1| hypothetical protein KNAG_0B01250 [Kazachstania naganishii CBS
           8797]
          Length = 154

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 40/82 (48%), Positives = 56/82 (68%), Gaps = 9/82 (10%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y DD +EYRHV+LP  + K++P +         R+L+E EWR +G+ QS GW H
Sbjct: 28  IHYSPRYSDDNFEYRHVMLPKAMLKVIPSDYFNSEIGTLRILTEDEWRGLGITQSLGWEH 87

Query: 55  YAIHRPEPHIMLFRRPLNYQQQ 76
           Y  H PEPHI+LF+RPLN++ +
Sbjct: 88  YECHAPEPHILLFKRPLNFEAE 109


>gi|380479428|emb|CCF43027.1| cyclin-dependent kinase regulatory subunit [Colletotrichum
           higginsianum]
          Length = 112

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 45/84 (53%), Positives = 55/84 (65%), Gaps = 9/84 (10%)

Query: 3   QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWV 53
            I YS +Y D  YEYRHV LP  + K +PK+         +LL E EWRA+G+ QS GW 
Sbjct: 29  SIHYSARYSDSEYEYRHVQLPKAMLKAIPKDYHDSSHGTLKLLWEEEWRALGITQSLGWE 88

Query: 54  HYAIHRPEPHIMLFRRPLNYQQQQ 77
           HY +H PEPHI+LF+RPLNYQ  Q
Sbjct: 89  HYEVHEPEPHILLFKRPLNYQPPQ 112


>gi|255948540|ref|XP_002565037.1| Pc22g10290 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211592054|emb|CAP98317.1| Pc22g10290 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|425766357|gb|EKV04972.1| Cell cycle regulatory protein Cks/Suc1, putative [Penicillium
           digitatum Pd1]
 gi|425767080|gb|EKV05662.1| Cell cycle regulatory protein Cks/Suc1, putative [Penicillium
           digitatum PHI26]
          Length = 114

 Score = 92.8 bits (229), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 43/83 (51%), Positives = 56/83 (67%), Gaps = 9/83 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y DD +EYRHV LP ++ K +P +         +LL E EWRA+G+ QS G
Sbjct: 27  VDSIHYSARYNDDKFEYRHVQLPKNMLKKIPTDYFDSSKGTLKLLWEEEWRALGITQSLG 86

Query: 52  WVHYAIHRPEPHIMLFRRPLNYQ 74
           W HY +H PEPHI+LF+RPLNYQ
Sbjct: 87  WEHYEVHEPEPHILLFKRPLNYQ 109


>gi|336367320|gb|EGN95665.1| hypothetical protein SERLA73DRAFT_186815 [Serpula lacrymans var.
          lacrymans S7.3]
 gi|336380038|gb|EGO21192.1| hypothetical protein SERLADRAFT_476062 [Serpula lacrymans var.
          lacrymans S7.9]
          Length = 113

 Score = 92.8 bits (229), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 44/82 (53%), Positives = 55/82 (67%), Gaps = 11/82 (13%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN-----------RLLSETEWRAIGVQQSRG 51
          +I YS++Y DD YEYRHV+LP  + KL+P+N           RLL E EWR IG+ QS G
Sbjct: 11 KIHYSDRYSDDKYEYRHVILPKPLLKLVPENYFQDPVHRGPLRLLEEEEWRGIGITQSLG 70

Query: 52 WVHYAIHRPEPHIMLFRRPLNY 73
          W HY +H PEPH++LFRR  NY
Sbjct: 71 WQHYEVHAPEPHVLLFRRLKNY 92


>gi|426331816|ref|XP_004026889.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1 [Gorilla
          gorilla gorilla]
 gi|12751051|gb|AAK07520.1|AF274943_1 PNAS-18 [Homo sapiens]
 gi|119573550|gb|EAW53165.1| CDC28 protein kinase regulatory subunit 1B, isoform CRA_c [Homo
          sapiens]
          Length = 63

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 40/54 (74%), Positives = 48/54 (88%)

Query: 18 RHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPL 71
          RHV+LP D+AKL+PK  L+SE+EWR +GVQQS+GWVHY IH PEPHI+LFRRPL
Sbjct: 4  RHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEPHILLFRRPL 57


>gi|238569768|ref|XP_002386724.1| hypothetical protein MPER_14932 [Moniliophthora perniciosa FA553]
 gi|215439423|gb|EEB87654.1| hypothetical protein MPER_14932 [Moniliophthora perniciosa FA553]
          Length = 94

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 43/79 (54%), Positives = 56/79 (70%), Gaps = 9/79 (11%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
          I YS++Y DD YEYRHV+LP  + + +P++         RLL+E EWRAIG+QQS GW H
Sbjct: 1  INYSDRYSDDVYEYRHVILPKQLLRYIPESYWDPKSGALRLLAEKEWRAIGIQQSLGWEH 60

Query: 55 YAIHRPEPHIMLFRRPLNY 73
          Y IH PEPH++LFRR  +Y
Sbjct: 61 YEIHAPEPHVLLFRRSKDY 79


>gi|68491056|ref|XP_710663.1| hypothetical protein CaO19.1282 [Candida albicans SC5314]
 gi|68491075|ref|XP_710654.1| hypothetical protein CaO19.8869 [Candida albicans SC5314]
 gi|46431885|gb|EAK91406.1| hypothetical protein CaO19.8869 [Candida albicans SC5314]
 gi|46431895|gb|EAK91415.1| hypothetical protein CaO19.1282 [Candida albicans SC5314]
 gi|238882788|gb|EEQ46426.1| cyclin-dependent kinases regulatory subunit [Candida albicans
          WO-1]
          Length = 102

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 41/78 (52%), Positives = 54/78 (69%), Gaps = 9/78 (11%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
          I YS +Y DD+YEYRHV+LP ++ K +P +         R+L+E EWR +G+ QS GW H
Sbjct: 22 IHYSPRYSDDSYEYRHVMLPKNMLKAIPHDYFNQETGTLRILTEEEWRGLGITQSLGWAH 81

Query: 55 YAIHRPEPHIMLFRRPLN 72
          Y  H PEPHI+LF+RPLN
Sbjct: 82 YETHAPEPHILLFKRPLN 99


>gi|448084970|ref|XP_004195738.1| Piso0_005148 [Millerozyma farinosa CBS 7064]
 gi|359377160|emb|CCE85543.1| Piso0_005148 [Millerozyma farinosa CBS 7064]
          Length = 102

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 9/81 (11%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y DDT+EYRHV+LP  + K +P++         R+L E EWR +G+ QS GW H
Sbjct: 22  IHYSPRYTDDTHEYRHVMLPKSMLKAIPQDYFNPESGTLRILLEEEWRGLGITQSLGWEH 81

Query: 55  YAIHRPEPHIMLFRRPLNYQQ 75
           Y  H PEPHI+LF+RP+NY Q
Sbjct: 82  YETHAPEPHILLFKRPMNYGQ 102


>gi|388578887|gb|EIM19219.1| CKS-domain-containing protein [Wallemia sebi CBS 633.66]
          Length = 108

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 10/84 (11%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN----------RLLSETEWRAIGVQQSRGW 52
          +I YS++Y DD +EYRHV+LP  V +LLP++          R+LSE EWR +G+ QS GW
Sbjct: 9  RIIYSDRYSDDFFEYRHVILPKQVLRLLPRSYFEADDSGVLRILSENEWRGMGITQSLGW 68

Query: 53 VHYAIHRPEPHIMLFRRPLNYQQQ 76
            YA H PEPHI+LFRR  +YQ++
Sbjct: 69 EMYATHAPEPHILLFRREKDYQEK 92


>gi|159115244|ref|XP_001707845.1| Cyclin-dependent kinases regulatory subunit [Giardia lamblia ATCC
          50803]
 gi|157435953|gb|EDO80171.1| Cyclin-dependent kinases regulatory subunit [Giardia lamblia ATCC
          50803]
 gi|253742436|gb|EES99269.1| Cyclin-dependent kinases regulatory subunit [Giardia intestinalis
          ATCC 50581]
 gi|308163114|gb|EFO65474.1| Cyclin-dependent kinases regulatory subunit [Giardia lamblia P15]
          Length = 85

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 38/65 (58%), Positives = 51/65 (78%)

Query: 6  YSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHIM 65
          YS KY+DD YEYRHV++P ++ K    + LLSE EWR +G+Q S+GWVHY  H+PEP+I+
Sbjct: 11 YSRKYYDDVYEYRHVIMPEEMVKKYNFDHLLSEQEWRGLGIQMSQGWVHYDYHKPEPNIL 70

Query: 66 LFRRP 70
          +FRRP
Sbjct: 71 MFRRP 75


>gi|403339901|gb|EJY69211.1| Cyclindependent kinase regulatory subunit putative [Oxytricha
          trifallax]
          Length = 112

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 39/68 (57%), Positives = 50/68 (73%)

Query: 5  QYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHI 64
          +YSE+Y DD YEYR+VVLP ++A  L    +L E EWR +G+ QSRGW HY  H+ EPHI
Sbjct: 12 EYSERYTDDHYEYRYVVLPREMATELKNRGILKEEEWRGMGITQSRGWEHYGFHKAEPHI 71

Query: 65 MLFRRPLN 72
          +LF+RPL 
Sbjct: 72 LLFKRPLG 79


>gi|145253424|ref|XP_001398225.1| cyclin-dependent kinase regulatory subunit [Aspergillus niger CBS
           513.88]
 gi|134083790|emb|CAK47124.1| unnamed protein product [Aspergillus niger]
          Length = 114

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 43/83 (51%), Positives = 56/83 (67%), Gaps = 9/83 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y DD +EYRHV LP ++ K +P +         +LL E EWRA+G+ QS G
Sbjct: 27  IDSIHYSARYSDDQFEYRHVQLPKNMLKKIPADYFDSSKGTLKLLWEDEWRALGITQSLG 86

Query: 52  WVHYAIHRPEPHIMLFRRPLNYQ 74
           W HY +H PEPHI+LF+RPLNYQ
Sbjct: 87  WEHYEVHEPEPHILLFKRPLNYQ 109


>gi|328862840|gb|EGG11940.1| hypothetical protein MELLADRAFT_54654 [Melampsora larici-populina
          98AG31]
          Length = 98

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 40/74 (54%), Positives = 53/74 (71%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS +Y DD +EYRHV+LP  + K LP +RL  E EWR +G++QS GW HY  H PEP
Sbjct: 25 QIFYSARYSDDFWEYRHVILPKQLVKYLPTDRLAEEDEWRGLGIRQSPGWEHYMRHAPEP 84

Query: 63 HIMLFRRPLNYQQQ 76
          H++LF+R  +YQ +
Sbjct: 85 HVLLFKREKDYQTK 98


>gi|448080465|ref|XP_004194641.1| Piso0_005148 [Millerozyma farinosa CBS 7064]
 gi|359376063|emb|CCE86645.1| Piso0_005148 [Millerozyma farinosa CBS 7064]
          Length = 128

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 9/81 (11%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y DDT+EYRHV+LP  + K +P++         R+L E EWR +G+ QS GW H
Sbjct: 48  IHYSPRYTDDTHEYRHVMLPKSMLKAIPQDYFNPESGTLRILLEEEWRGLGITQSLGWEH 107

Query: 55  YAIHRPEPHIMLFRRPLNYQQ 75
           Y  H PEPHI+LF+RP+NY Q
Sbjct: 108 YETHAPEPHILLFKRPINYGQ 128


>gi|342877555|gb|EGU79005.1| hypothetical protein FOXB_10434 [Fusarium oxysporum Fo5176]
          Length = 114

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 44/86 (51%), Positives = 56/86 (65%), Gaps = 9/86 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y D  YEYRHV LP  + K +PK+         +LL E EWRA+G+ QS G
Sbjct: 29  IDSIHYSARYSDSEYEYRHVQLPKAMLKAIPKDYHDTSKGTLKLLWEEEWRALGITQSLG 88

Query: 52  WVHYAIHRPEPHIMLFRRPLNYQQQQ 77
           W HY +H PEPHI+LF+RPLN+Q  Q
Sbjct: 89  WEHYEVHEPEPHILLFKRPLNFQPPQ 114


>gi|440640090|gb|ELR10009.1| cyclin-dependent kinase regulatory subunit CKS1 [Geomyces
           destructans 20631-21]
          Length = 111

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 9/82 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y DD YEYRHV LP  + K +PK          +LL E EWRAIG+ QS G
Sbjct: 25  IDSIHYSPRYSDDDYEYRHVQLPKAMLKAIPKEYHDPSKGTLKLLWEEEWRAIGITQSLG 84

Query: 52  WVHYAIHRPEPHIMLFRRPLNY 73
           W HY +H PEPHI+LF+RP+NY
Sbjct: 85  WEHYEVHEPEPHILLFKRPINY 106


>gi|408396638|gb|EKJ75793.1| hypothetical protein FPSE_03973 [Fusarium pseudograminearum CS3096]
          Length = 114

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 44/86 (51%), Positives = 56/86 (65%), Gaps = 9/86 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y D  YEYRHV LP  + K +PK+         +LL E EWRA+G+ QS G
Sbjct: 29  IDSIHYSARYSDSEYEYRHVQLPKAMLKAIPKDYHDSSKGTLKLLWEEEWRALGITQSLG 88

Query: 52  WVHYAIHRPEPHIMLFRRPLNYQQQQ 77
           W HY +H PEPHI+LF+RPLN+Q  Q
Sbjct: 89  WEHYEVHEPEPHILLFKRPLNFQPPQ 114


>gi|270010620|gb|EFA07068.1| hypothetical protein TcasGA2_TC010047 [Tribolium castaneum]
          Length = 268

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 43/83 (51%), Positives = 55/83 (66%), Gaps = 9/83 (10%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I YS+KY+D+ YEYRHVVLP ++ K++PK  L+SE EWR IGVQQS+GWVHY  H P+  
Sbjct: 13 IYYSDKYYDEEYEYRHVVLPKEMVKMVPKTHLMSEDEWRGIGVQQSKGWVHYMTHSPDEK 72

Query: 64 IMLFRRPLNYQQQQENQAQQNIL 86
              R+ L         AQ N+L
Sbjct: 73 CTNLRQGL---------AQTNLL 86


>gi|340708456|pdb|3QY2|A Chain A, Crystal Structure Of The P93a Monomer Mutant Of S.
           Cerevisiae Cks1
 gi|340708457|pdb|3QY2|B Chain B, Crystal Structure Of The P93a Monomer Mutant Of S.
           Cerevisiae Cks1
          Length = 117

 Score = 92.0 bits (227), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 41/83 (49%), Positives = 55/83 (66%), Gaps = 9/83 (10%)

Query: 3   QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWV 53
            I YS +Y DD YEYRHV+LP  + K++P +         R+L+E EWR +G+ QS GW 
Sbjct: 27  SIHYSPRYSDDNYEYRHVMLPKAMLKVIPSDYFNSEVGTLRILTEDEWRGLGITQSLGWE 86

Query: 54  HYAIHRPEPHIMLFRRPLNYQQQ 76
           HY  H  EPHI+LF+RPLNY+ +
Sbjct: 87  HYECHAAEPHILLFKRPLNYEAE 109


>gi|302409986|ref|XP_003002827.1| cyclin-dependent kinases regulatory subunit [Verticillium
           albo-atrum VaMs.102]
 gi|261358860|gb|EEY21288.1| cyclin-dependent kinases regulatory subunit [Verticillium
           albo-atrum VaMs.102]
 gi|346971801|gb|EGY15253.1| cyclin-dependent kinases regulatory subunit [Verticillium dahliae
           VdLs.17]
          Length = 112

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 45/86 (52%), Positives = 55/86 (63%), Gaps = 9/86 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y D  YEYRHV LP  + K +PK          +LL E EWRA+G+ QS G
Sbjct: 27  IDSIHYSARYSDSEYEYRHVQLPKAMLKAIPKAYHDSQNGTLKLLWEEEWRALGITQSLG 86

Query: 52  WVHYAIHRPEPHIMLFRRPLNYQQQQ 77
           W HY +H PEPHI+LF+RPLNYQ  Q
Sbjct: 87  WEHYEVHEPEPHILLFKRPLNYQPPQ 112


>gi|313219564|emb|CBY30486.1| unnamed protein product [Oikopleura dioica]
 gi|313225828|emb|CBY07302.1| unnamed protein product [Oikopleura dioica]
          Length = 75

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 51/67 (76%)

Query: 6  YSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHIM 65
          YS+KY D  YEYRHV +P +  + +PK R ++E EWR +GVQQS GWVHY +H PEPH++
Sbjct: 8  YSDKYDDGKYEYRHVHVPKEWVRNIPKGRCMTEDEWRDLGVQQSMGWVHYMVHEPEPHVL 67

Query: 66 LFRRPLN 72
          LFRR L+
Sbjct: 68 LFRRALS 74


>gi|344234090|gb|EGV65960.1| cyclin-dependent kinases regulatory subunit [Candida tenuis ATCC
           10573]
          Length = 104

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 41/82 (50%), Positives = 56/82 (68%), Gaps = 9/82 (10%)

Query: 3   QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWV 53
            I YS +Y DD++EYRHV+LP  + KL+P++         R+L E EWR +G+ QS GW+
Sbjct: 23  SIHYSPRYSDDSHEYRHVMLPKGMLKLIPQDYFNPETGTLRILMEDEWRGLGITQSLGWM 82

Query: 54  HYAIHRPEPHIMLFRRPLNYQQ 75
           HY  H PEPHI+LF+R +NY Q
Sbjct: 83  HYETHAPEPHILLFKRAINYGQ 104


>gi|260945759|ref|XP_002617177.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
 gi|238849031|gb|EEQ38495.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
          Length = 102

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 42/82 (51%), Positives = 55/82 (67%), Gaps = 9/82 (10%)

Query: 3   QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWV 53
            I YS +Y DDT EYRHV+LP  + K +P++         R+L E EWR +G+ QS GWV
Sbjct: 21  HIHYSPRYTDDTNEYRHVMLPKAMLKSIPQDYFNPETGTLRILLEDEWRGLGITQSLGWV 80

Query: 54  HYAIHRPEPHIMLFRRPLNYQQ 75
           HY  H PEPHI+LF+RP+N+ Q
Sbjct: 81  HYETHAPEPHILLFKRPINFDQ 102


>gi|134113098|ref|XP_774825.1| hypothetical protein CNBF2540 [Cryptococcus neoformans var.
          neoformans B-3501A]
 gi|50257471|gb|EAL20178.1| hypothetical protein CNBF2540 [Cryptococcus neoformans var.
          neoformans B-3501A]
 gi|405121312|gb|AFR96081.1| protein kinase activator [Cryptococcus neoformans var. grubii
          H99]
          Length = 104

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 42/79 (53%), Positives = 54/79 (68%), Gaps = 10/79 (12%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN----------RLLSETEWRAIGVQQSRGW 52
          +I YS++Y DD +EYRHV+LP  + KL+PK           R+L E EWR IG+ QS GW
Sbjct: 16 RIIYSDRYSDDRFEYRHVILPKQMLKLIPKRYFASDDSGLLRILEEDEWRGIGITQSLGW 75

Query: 53 VHYAIHRPEPHIMLFRRPL 71
           H+ +H PEPHI+LFRRPL
Sbjct: 76 EHFEVHAPEPHILLFRRPL 94


>gi|169603457|ref|XP_001795150.1| hypothetical protein SNOG_04738 [Phaeosphaeria nodorum SN15]
 gi|160706399|gb|EAT88498.2| hypothetical protein SNOG_04738 [Phaeosphaeria nodorum SN15]
          Length = 116

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 43/79 (54%), Positives = 55/79 (69%), Gaps = 8/79 (10%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN--------RLLSETEWRAIGVQQSRGWVHY 55
           I YS +Y DD  EYRHV LP  + K++PK+        +LL E EWRA+G+ QS GW HY
Sbjct: 34  IHYSARYSDDENEYRHVQLPKQMLKVIPKDYFDSRGTLKLLWEEEWRALGITQSLGWEHY 93

Query: 56  AIHRPEPHIMLFRRPLNYQ 74
            +H PEPHI+LF+RP+NYQ
Sbjct: 94  EVHEPEPHILLFKRPINYQ 112


>gi|209877102|ref|XP_002139993.1| cyclin-dependent kinase regulatory subunit family protein
          [Cryptosporidium muris RN66]
 gi|209555599|gb|EEA05644.1| cyclin-dependent kinase regulatory subunit family protein
          [Cryptosporidium muris RN66]
          Length = 105

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 45/79 (56%), Positives = 52/79 (65%), Gaps = 6/79 (7%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAK------LLPKNRLLSETEWRAIGVQQSRGWVHYAI 57
          I YS KY D  YEYRHV LP  ++K      L   N LL E EWR +G+QQSRGW HY +
Sbjct: 8  IVYSSKYEDGVYEYRHVTLPRAISKRAQSVMLTKPNGLLREQEWRMLGIQQSRGWQHYLV 67

Query: 58 HRPEPHIMLFRRPLNYQQQ 76
          H+PEPHI+LFRRPL    Q
Sbjct: 68 HKPEPHILLFRRPLGTNPQ 86


>gi|358387839|gb|EHK25433.1| hypothetical protein TRIVIDRAFT_62116 [Trichoderma virens Gv29-8]
          Length = 112

 Score = 91.7 bits (226), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 56/83 (67%), Gaps = 9/83 (10%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I+YSE+Y D  +EYRHV LP  + K +PK          +LL E EWRA+G+ QS GW H
Sbjct: 30  IRYSERYNDSEFEYRHVQLPKMMLKAIPKEYHDSAKGTLKLLWEDEWRAMGMTQSLGWEH 89

Query: 55  YAIHRPEPHIMLFRRPLNYQQQQ 77
           Y +H PEPHI+LF+RPLNYQ  Q
Sbjct: 90  YEVHEPEPHILLFKRPLNYQPPQ 112


>gi|156844084|ref|XP_001645106.1| hypothetical protein Kpol_538p8 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115763|gb|EDO17248.1| hypothetical protein Kpol_538p8 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 135

 Score = 91.7 bits (226), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 41/82 (50%), Positives = 56/82 (68%), Gaps = 9/82 (10%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y DDT+EYRHV+LP  + K++P +         R+L+E EWR +G+ QS GW H
Sbjct: 29  IHYSPRYSDDTHEYRHVMLPKAMLKVIPSDYFNSETGTLRILTEDEWRGLGITQSLGWEH 88

Query: 55  YAIHRPEPHIMLFRRPLNYQQQ 76
           Y  H PEPHI+LF+R LNY+ +
Sbjct: 89  YECHAPEPHILLFKRLLNYEAE 110


>gi|350297353|gb|EGZ78330.1| cell cycle regulatory protein [Neurospora tetrasperma FGSC 2509]
          Length = 113

 Score = 91.7 bits (226), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 44/86 (51%), Positives = 55/86 (63%), Gaps = 9/86 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y D  YEYRHV LP  + K +P +         +LL E EWRA+G+ QS G
Sbjct: 27  IDSIHYSTRYSDSEYEYRHVQLPKAMLKAIPSDYHDKSKGTLKLLWEEEWRAMGITQSLG 86

Query: 52  WVHYAIHRPEPHIMLFRRPLNYQQQQ 77
           W HY +H PEPHI+LF+RPLNYQ  Q
Sbjct: 87  WEHYEVHEPEPHILLFKRPLNYQPPQ 112


>gi|336276217|ref|XP_003352862.1| hypothetical protein SMAC_04976 [Sordaria macrospora k-hell]
 gi|380092980|emb|CCC09217.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 118

 Score = 91.7 bits (226), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 44/86 (51%), Positives = 55/86 (63%), Gaps = 9/86 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y D  YEYRHV LP  + K +P +         +LL E EWRA+G+ QS G
Sbjct: 32  IDSIHYSTRYSDSEYEYRHVQLPKAMLKAIPSDYHDKSKGTLKLLWEEEWRAMGITQSLG 91

Query: 52  WVHYAIHRPEPHIMLFRRPLNYQQQQ 77
           W HY +H PEPHI+LF+RPLNYQ  Q
Sbjct: 92  WEHYEVHEPEPHILLFKRPLNYQPPQ 117


>gi|164429677|ref|XP_964606.2| hypothetical protein NCU02079 [Neurospora crassa OR74A]
 gi|157073574|gb|EAA35370.2| hypothetical protein NCU02079 [Neurospora crassa OR74A]
 gi|336463430|gb|EGO51670.1| hypothetical protein NEUTE1DRAFT_125336 [Neurospora tetrasperma
           FGSC 2508]
          Length = 113

 Score = 91.3 bits (225), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 44/86 (51%), Positives = 55/86 (63%), Gaps = 9/86 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y D  YEYRHV LP  + K +P +         +LL E EWRA+G+ QS G
Sbjct: 27  IDSIHYSTRYSDSEYEYRHVQLPKAMLKAIPSDYHDKSKGTLKLLWEEEWRAMGITQSLG 86

Query: 52  WVHYAIHRPEPHIMLFRRPLNYQQQQ 77
           W HY +H PEPHI+LF+RPLNYQ  Q
Sbjct: 87  WEHYEVHEPEPHILLFKRPLNYQPPQ 112


>gi|154299919|ref|XP_001550377.1| hypothetical protein BC1G_10850 [Botryotinia fuckeliana B05.10]
 gi|347841563|emb|CCD56135.1| similar to cyclin-dependent protein kinase regulatory subunit Suc1
           [Botryotinia fuckeliana]
          Length = 116

 Score = 91.3 bits (225), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 43/83 (51%), Positives = 55/83 (66%), Gaps = 9/83 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y DD YEYRHV LP  + K++PK          +LL E EWRA+G+ QS G
Sbjct: 28  IDAIHYSARYSDDQYEYRHVQLPKAMLKVIPKEYHDPQTGTLKLLWEEEWRALGITQSLG 87

Query: 52  WVHYAIHRPEPHIMLFRRPLNYQ 74
           W HY +H PEPHI+LF+R +NYQ
Sbjct: 88  WEHYEVHEPEPHILLFKRSINYQ 110


>gi|307108790|gb|EFN57029.1| hypothetical protein CHLNCDRAFT_21447 [Chlorella variabilis]
          Length = 91

 Score = 91.3 bits (225), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 38/55 (69%), Positives = 48/55 (87%)

Query: 18 RHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLN 72
          RHV LPPD+ +L+PK RL+SE EWR IGVQQSRGWV +A+H+PEPHI++ RRPL+
Sbjct: 18 RHVRLPPDIVQLVPKGRLMSEVEWRGIGVQQSRGWVRFAVHQPEPHILMSRRPLD 72


>gi|156053592|ref|XP_001592722.1| cyclin-dependent kinases regulatory subunit [Sclerotinia
           sclerotiorum 1980]
 gi|154703424|gb|EDO03163.1| cyclin-dependent kinases regulatory subunit [Sclerotinia
           sclerotiorum 1980 UF-70]
          Length = 116

 Score = 91.3 bits (225), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 43/83 (51%), Positives = 55/83 (66%), Gaps = 9/83 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y DD YEYRHV LP  + K++PK          +LL E EWRA+G+ QS G
Sbjct: 28  IDAIHYSARYSDDQYEYRHVQLPKAMLKVIPKEYHDPQTGTLKLLWEEEWRALGITQSLG 87

Query: 52  WVHYAIHRPEPHIMLFRRPLNYQ 74
           W HY +H PEPHI+LF+R +NYQ
Sbjct: 88  WEHYEVHEPEPHILLFKRSINYQ 110


>gi|403160493|ref|XP_003320990.2| cyclin-dependent kinase regulatory subunit CKS1 [Puccinia graminis
           f. sp. tritici CRL 75-36-700-3]
 gi|375170270|gb|EFP76571.2| cyclin-dependent kinase regulatory subunit CKS1 [Puccinia graminis
           f. sp. tritici CRL 75-36-700-3]
          Length = 103

 Score = 91.3 bits (225), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 40/74 (54%), Positives = 53/74 (71%)

Query: 3   QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
           QI YS +Y DD +EYRHV+LP  + K LP +RL  E EWR +G++QS GW HY  H PEP
Sbjct: 27  QIFYSARYSDDFWEYRHVILPKQLVKYLPTDRLALEEEWRGLGIRQSPGWEHYMRHAPEP 86

Query: 63  HIMLFRRPLNYQQQ 76
           H++LF+R  +YQ +
Sbjct: 87  HVLLFKREKDYQTK 100


>gi|406865169|gb|EKD18212.1| cyclin-dependent kinase regulatory subunit [Marssonina brunnea f.
           sp. 'multigermtubi' MB_m1]
          Length = 128

 Score = 91.3 bits (225), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 42/82 (51%), Positives = 55/82 (67%), Gaps = 9/82 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y D+ YEYRHV LP ++ K +PK          +LL E EWRA+G+ QS G
Sbjct: 42  IDSIHYSARYSDNEYEYRHVQLPKNMLKAIPKAYHDSTNGTLKLLWEEEWRALGITQSLG 101

Query: 52  WVHYAIHRPEPHIMLFRRPLNY 73
           W HY +H PEPHI+LF+RP+NY
Sbjct: 102 WEHYEVHEPEPHILLFKRPINY 123


>gi|402085920|gb|EJT80818.1| cyclin-dependent kinase regulatory subunit [Gaeumannomyces graminis
           var. tritici R3-111a-1]
          Length = 127

 Score = 91.3 bits (225), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 43/83 (51%), Positives = 54/83 (65%), Gaps = 9/83 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y D  YEYRHV LP  + K +PK+         +LL E EWR +G+ QS G
Sbjct: 41  IDSIHYSSRYNDSEYEYRHVQLPKAMLKAIPKDYHDSSKGTLKLLWEDEWRGMGITQSLG 100

Query: 52  WVHYAIHRPEPHIMLFRRPLNYQ 74
           W HY +H PEPHI+LF+RPLNYQ
Sbjct: 101 WEHYEVHEPEPHILLFKRPLNYQ 123


>gi|353243577|emb|CCA75101.1| probable CKS1-cyclin-dependent kinases regulatory subunit
           [Piriformospora indica DSM 11827]
          Length = 101

 Score = 91.3 bits (225), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 56/82 (68%), Gaps = 10/82 (12%)

Query: 3   QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN----------RLLSETEWRAIGVQQSRGW 52
           +I YS++Y DD YEYRHV+LP  + K++P+           RLL+E EWR IG+ QS GW
Sbjct: 20  RIHYSDRYSDDFYEYRHVILPKPLLKMVPRAYFSDTTPGVLRLLTEEEWRNIGITQSPGW 79

Query: 53  VHYAIHRPEPHIMLFRRPLNYQ 74
           VHY +H PEPH++LFRR L  Q
Sbjct: 80  VHYEVHAPEPHVLLFRRELQQQ 101


>gi|387592196|gb|EIJ87220.1| cyclin-dependent kinase regulatory subunit [Nematocida parisii
          ERTm3]
 gi|387597461|gb|EIJ95081.1| cyclin-dependent kinase regulatory subunit [Nematocida parisii
          ERTm1]
          Length = 85

 Score = 91.3 bits (225), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 40/68 (58%), Positives = 54/68 (79%), Gaps = 1/68 (1%)

Query: 3  QIQYSEKYFD-DTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPE 61
          QI YSE Y D +   YRHV+LP ++A+LLP++RLL ETEWRA+G+ QS+GW HY  H PE
Sbjct: 14 QIYYSETYADINNNLYRHVILPKELAQLLPRDRLLEETEWRALGITQSKGWRHYMRHNPE 73

Query: 62 PHIMLFRR 69
          PH++LF++
Sbjct: 74 PHVLLFKK 81


>gi|351704383|gb|EHB07302.1| Cyclin-dependent kinases regulatory subunit 1, partial
          [Heterocephalus glaber]
          Length = 62

 Score = 90.9 bits (224), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 39/58 (67%), Positives = 49/58 (84%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          QI YS+KY D+ +EYRHV+LP D+AKL+PK  L+SE+EWR +GVQQS+GWVHY IH P
Sbjct: 5  QIYYSDKYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEP 62


>gi|449299252|gb|EMC95266.1| hypothetical protein BAUCODRAFT_35256 [Baudoinia compniacensis UAMH
           10762]
          Length = 117

 Score = 90.9 bits (224), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 43/83 (51%), Positives = 54/83 (65%), Gaps = 9/83 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y DD YEYRHV LP  + K +PK          +LL E EWR +G+ QS G
Sbjct: 30  VDSIHYSSRYNDDHYEYRHVQLPKQMLKKIPKEYFEPSRGTLKLLWEEEWRGLGITQSLG 89

Query: 52  WVHYAIHRPEPHIMLFRRPLNYQ 74
           W HY +H PEPHI+LF+RP+NYQ
Sbjct: 90  WEHYEVHEPEPHILLFKRPMNYQ 112


>gi|403416918|emb|CCM03618.1| predicted protein [Fibroporia radiculosa]
          Length = 132

 Score = 90.9 bits (224), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 41/81 (50%), Positives = 55/81 (67%), Gaps = 10/81 (12%)

Query: 3   QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN----------RLLSETEWRAIGVQQSRGW 52
           +I YS++Y DD YEYRHV+LP  + K++PK           +LL+E EWR IG+ QS GW
Sbjct: 30  KIHYSDRYSDDEYEYRHVILPKPLFKMIPKALFNPDKSGTLKLLTEQEWRGIGITQSLGW 89

Query: 53  VHYAIHRPEPHIMLFRRPLNY 73
            HY +H PEPH++LFRR  N+
Sbjct: 90  EHYEVHAPEPHVLLFRRLKNF 110


>gi|255732481|ref|XP_002551164.1| cyclin-dependent kinases regulatory subunit [Candida tropicalis
           MYA-3404]
 gi|240131450|gb|EER31010.1| cyclin-dependent kinases regulatory subunit [Candida tropicalis
           MYA-3404]
          Length = 102

 Score = 90.9 bits (224), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 41/81 (50%), Positives = 57/81 (70%), Gaps = 9/81 (11%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y DD++EYRHV+LP ++ K++P++         R+L E EWR +G+ QS GWVH
Sbjct: 22  IHYSPRYSDDSHEYRHVMLPKNMLKVIPQDYFNPETGTLRILLEEEWRGLGITQSLGWVH 81

Query: 55  YAIHRPEPHIMLFRRPLNYQQ 75
           Y  H PEPHI+LF+RPL+  Q
Sbjct: 82  YETHAPEPHILLFKRPLSSGQ 102


>gi|389641391|ref|XP_003718328.1| cyclin-dependent kinase regulatory subunit [Magnaporthe oryzae
           70-15]
 gi|351640881|gb|EHA48744.1| cyclin-dependent kinase regulatory subunit [Magnaporthe oryzae
           70-15]
          Length = 119

 Score = 90.9 bits (224), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 43/83 (51%), Positives = 53/83 (63%), Gaps = 9/83 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y D  YEYRHV LP  + K +PK          +LL E EWR +G+ QS G
Sbjct: 33  LDSIHYSSRYNDSEYEYRHVQLPKAMLKAIPKEYHDSSKGTLKLLWEEEWRGMGITQSLG 92

Query: 52  WVHYAIHRPEPHIMLFRRPLNYQ 74
           W HY +H PEPHI+LF+RPLNYQ
Sbjct: 93  WEHYEVHEPEPHILLFKRPLNYQ 115


>gi|452842124|gb|EME44060.1| hypothetical protein DOTSEDRAFT_24156 [Dothistroma septosporum
           NZE10]
          Length = 113

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 41/83 (49%), Positives = 55/83 (66%), Gaps = 9/83 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y DD +EYRHV LP  + K +PK+         +LL E EWR +G+ QS G
Sbjct: 27  IDSIHYSSRYNDDHFEYRHVQLPKQMLKAIPKDYFDGARGTLKLLWEDEWRGLGITQSLG 86

Query: 52  WVHYAIHRPEPHIMLFRRPLNYQ 74
           W HY +H PEPHI+LF+RP+N+Q
Sbjct: 87  WEHYEVHEPEPHILLFKRPINFQ 109


>gi|400595474|gb|EJP63275.1| cyclin-dependent kinase regulatory subunit [Beauveria bassiana
           ARSEF 2860]
          Length = 112

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 43/86 (50%), Positives = 56/86 (65%), Gaps = 9/86 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y D  YEYRHV LP  + K +P++         +LL E EWRA+G+ QS G
Sbjct: 27  IDSIHYSNRYNDSEYEYRHVQLPKAMLKAIPEDYQDAQKGTLKLLWEEEWRALGITQSLG 86

Query: 52  WVHYAIHRPEPHIMLFRRPLNYQQQQ 77
           W HY +H PEPHI+LF+RP+NYQ  Q
Sbjct: 87  WEHYEVHEPEPHILLFKRPINYQPPQ 112


>gi|407042333|gb|EKE41274.1| cyclin-dependent kinase regulatory subunit, putative [Entamoeba
          nuttalli P19]
 gi|449701809|gb|EMD42558.1| cyclin-dependent kinases regulatory subunit, putative [Entamoeba
          histolytica KU27]
          Length = 75

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 38/64 (59%), Positives = 52/64 (81%)

Query: 6  YSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHIM 65
          YS++Y DD YEYRHV+LP ++A  L K+ L++E EWR +G+QQS GWVHY I +PEP+++
Sbjct: 7  YSDRYKDDQYEYRHVILPDEMAAKLIKDHLMTEDEWRKLGIQQSVGWVHYDIFKPEPNVL 66

Query: 66 LFRR 69
          LFRR
Sbjct: 67 LFRR 70


>gi|71018253|ref|XP_759357.1| hypothetical protein UM03210.1 [Ustilago maydis 521]
 gi|46099082|gb|EAK84315.1| hypothetical protein UM03210.1 [Ustilago maydis 521]
          Length = 127

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 42/81 (51%), Positives = 56/81 (69%), Gaps = 10/81 (12%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN----------RLLSETEWRAIGVQQSRGW 52
          +IQYS+KY DD +EYRHV+LP  + KLLP++          R+LS  EWR +G+ QS GW
Sbjct: 18 RIQYSDKYNDDEWEYRHVILPKKMLKLLPEDYFDPAEPGVLRILSVEEWRQLGITQSMGW 77

Query: 53 VHYAIHRPEPHIMLFRRPLNY 73
           HY +H PEPHI+LFRR  ++
Sbjct: 78 EHYEVHAPEPHILLFRREKDF 98


>gi|170088456|ref|XP_001875451.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164650651|gb|EDR14892.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 100

 Score = 90.1 bits (222), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 10/83 (12%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN----------RLLSETEWRAIGVQQSR 50
            +I YS++Y DD +EYRHV+LP  + K++PK           RLL+E EWR IG+ QS 
Sbjct: 1  FNRIHYSDRYSDDEFEYRHVILPKQLLKMVPKEYFNQDDTGTLRLLTEQEWRGIGITQSL 60

Query: 51 GWVHYAIHRPEPHIMLFRRPLNY 73
          GW HY +H PEPH++LFRR  ++
Sbjct: 61 GWEHYEVHAPEPHVLLFRRAKDF 83


>gi|190346594|gb|EDK38716.2| hypothetical protein PGUG_02813 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 198

 Score = 90.1 bits (222), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 53/80 (66%), Gaps = 9/80 (11%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y DD  EYRHV+LP ++ K +P++         R+L E EWR +G+ QS GW H
Sbjct: 119 IHYSPRYSDDINEYRHVMLPKNMLKAIPQDYFNPETGTLRILHEDEWRGLGITQSLGWAH 178

Query: 55  YAIHRPEPHIMLFRRPLNYQ 74
           Y  H PEPHI+LF+RP+NY 
Sbjct: 179 YETHAPEPHILLFKRPINYS 198


>gi|255716810|ref|XP_002554686.1| KLTH0F11220p [Lachancea thermotolerans]
 gi|238936069|emb|CAR24249.1| KLTH0F11220p [Lachancea thermotolerans CBS 6340]
          Length = 110

 Score = 90.1 bits (222), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 55/80 (68%), Gaps = 9/80 (11%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y DDT+EYRHV+LP  + K++P +         R+L+E EWR +GV QS GW H
Sbjct: 28  IHYSPRYSDDTHEYRHVMLPKAMLKVIPSDYFNSETGTLRILTEDEWRGLGVTQSLGWEH 87

Query: 55  YAIHRPEPHIMLFRRPLNYQ 74
           Y  H PEPHI+LF+R L+Y+
Sbjct: 88  YECHAPEPHILLFKRVLDYK 107


>gi|346319831|gb|EGX89432.1| cell cycle regulatory protein Cks/Suc1, putative [Cordyceps
           militaris CM01]
          Length = 114

 Score = 90.1 bits (222), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 42/80 (52%), Positives = 54/80 (67%), Gaps = 9/80 (11%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y D  YEYRHV LP  + K +P++         +LL E EWRA+G+ QS GW H
Sbjct: 30  IHYSNRYNDSEYEYRHVQLPKAMLKAIPEDYQDSSKGTLKLLWEEEWRALGITQSLGWEH 89

Query: 55  YAIHRPEPHIMLFRRPLNYQ 74
           Y +H PEPHI+LF+RP+NYQ
Sbjct: 90  YEVHEPEPHILLFKRPINYQ 109


>gi|146418239|ref|XP_001485085.1| hypothetical protein PGUG_02813 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 198

 Score = 90.1 bits (222), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 53/80 (66%), Gaps = 9/80 (11%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y DD  EYRHV+LP ++ K +P++         R+L E EWR +G+ QS GW H
Sbjct: 119 IHYSPRYSDDINEYRHVMLPKNMLKAIPQDYFNPETGTLRILHEDEWRGLGITQSLGWAH 178

Query: 55  YAIHRPEPHIMLFRRPLNYQ 74
           Y  H PEPHI+LF+RP+NY 
Sbjct: 179 YETHAPEPHILLFKRPINYS 198


>gi|296421054|ref|XP_002840081.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636293|emb|CAZ84272.1| unnamed protein product [Tuber melanosporum]
          Length = 112

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 54/80 (67%), Gaps = 9/80 (11%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS++Y D  YEYRHV+LP  + K +PK+         ++L E EWR +G+ QS GW H
Sbjct: 29  IHYSDRYSDKQYEYRHVMLPKQMLKQIPKDYFDTETGTLKILHEEEWRGLGITQSLGWQH 88

Query: 55  YAIHRPEPHIMLFRRPLNYQ 74
           Y IH PEPHI+LF+RP N+Q
Sbjct: 89  YEIHAPEPHILLFKRPKNFQ 108


>gi|506875|dbj|BAA01859.1| Cks1 protein [Saccharomyces cerevisiae]
          Length = 119

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 39/77 (50%), Positives = 53/77 (68%), Gaps = 9/77 (11%)

Query: 9  KYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVHYAIHR 59
          +Y DD YEYRHV+LP  + K++P +         R+L+E EWR +G+ QS GW HY  H 
Sbjct: 2  RYSDDNYEYRHVMLPKAMLKVIPSDYFNSEVGTLRILTEDEWRGLGITQSLGWEHYECHA 61

Query: 60 PEPHIMLFRRPLNYQQQ 76
          PEPHI+LF+RPLNY+ +
Sbjct: 62 PEPHILLFKRPLNYEAE 78


>gi|311248596|ref|XP_003123209.1| PREDICTED: cyclin-dependent kinases regulatory subunit 2-like
          [Sus scrofa]
          Length = 79

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 41/75 (54%), Positives = 57/75 (76%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI Y +KYF++ YEY+HV+LP +++K +P+  L+SE EWR +GVQQ  GWVHY IH PEP
Sbjct: 5  QIYYLDKYFNEHYEYQHVMLPRELSKQIPQIHLMSEEEWRRLGVQQGLGWVHYMIHEPEP 64

Query: 63 HIMLFRRPLNYQQQQ 77
          +I+L R+ L   QQ+
Sbjct: 65 YILLLRQTLPKDQQK 79


>gi|367052343|ref|XP_003656550.1| hypothetical protein THITE_2069837 [Thielavia terrestris NRRL 8126]
 gi|347003815|gb|AEO70214.1| hypothetical protein THITE_2069837 [Thielavia terrestris NRRL 8126]
          Length = 118

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/83 (51%), Positives = 54/83 (65%), Gaps = 9/83 (10%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y D+ +EYRHV LP  + K +P           +LL E EWRA+G+ QS GW H
Sbjct: 36  IHYSTRYSDNEFEYRHVQLPKAMLKAIPAEYHDKSKGTLKLLWEEEWRAMGITQSLGWEH 95

Query: 55  YAIHRPEPHIMLFRRPLNYQQQQ 77
           Y +H PEPHI+LF+RPLNYQ  Q
Sbjct: 96  YEVHEPEPHILLFKRPLNYQPPQ 118


>gi|444721063|gb|ELW61817.1| Selenocysteine insertion sequence-binding protein 2 [Tupaia
          chinensis]
          Length = 974

 Score = 89.4 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/62 (62%), Positives = 49/62 (79%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          QI YS+KYFD+ YEYRHV+LP +++K +PK  L+SE EWR +GVQQS GWVHY IH P P
Sbjct: 5  QIYYSDKYFDEHYEYRHVMLPRELSKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEPGP 64

Query: 63 HI 64
           +
Sbjct: 65 EL 66


>gi|388854531|emb|CCF51918.1| related to CKS1-cyclin-dependent kinases regulatory subunit
           [Ustilago hordei]
          Length = 186

 Score = 89.0 bits (219), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 41/83 (49%), Positives = 55/83 (66%), Gaps = 10/83 (12%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN----------RLLSETEWRAIGVQQSR 50
           + +I YS+KY DD +EYRHV+LP  + KL P++          R+LS  EWR IG+ QS 
Sbjct: 78  LERIHYSDKYNDDEWEYRHVILPKPMLKLFPESYFDPSEPGVLRILSVKEWRDIGINQSM 137

Query: 51  GWVHYAIHRPEPHIMLFRRPLNY 73
           GW HY +H PEPHI+LFRR  ++
Sbjct: 138 GWEHYEVHAPEPHILLFRREKDF 160


>gi|378755389|gb|EHY65416.1| cyclin-dependent kinase regulatory subunit [Nematocida sp. 1
          ERTm2]
          Length = 85

 Score = 89.0 bits (219), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 38/71 (53%), Positives = 53/71 (74%), Gaps = 1/71 (1%)

Query: 3  QIQYSEKYFDDTYE-YRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPE 61
          QI YS+ Y D+    YRHV+LP +++++LPK RLL E EWR+IG+ QS+GW HY  H PE
Sbjct: 14 QIYYSDTYTDENNNVYRHVILPNELSQMLPKGRLLEEEEWRSIGITQSKGWKHYMRHGPE 73

Query: 62 PHIMLFRRPLN 72
          PH++LF++  N
Sbjct: 74 PHVLLFKKSAN 84


>gi|307170300|gb|EFN62655.1| Cyclin-dependent kinases regulatory subunit [Camponotus
          floridanus]
          Length = 53

 Score = 89.0 bits (219), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 39/53 (73%), Positives = 46/53 (86%)

Query: 17 YRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHIMLFRR 69
          YRHVVLP ++ KL+P+  LLSE EWRAIGVQQS+GWVHY IH PEPHI+LF+R
Sbjct: 1  YRHVVLPKEMVKLVPRTHLLSEQEWRAIGVQQSQGWVHYMIHEPEPHILLFKR 53


>gi|212541432|ref|XP_002150871.1| cell cycle regulatory protein Cks/Suc1, putative [Talaromyces
           marneffei ATCC 18224]
 gi|210068170|gb|EEA22262.1| cell cycle regulatory protein Cks/Suc1, putative [Talaromyces
           marneffei ATCC 18224]
          Length = 115

 Score = 89.0 bits (219), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 41/83 (49%), Positives = 54/83 (65%), Gaps = 9/83 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y D  YEYRHV LP ++ K +P+          +LL E EWR +G+ QS G
Sbjct: 29  IDAIHYSSRYSDSEYEYRHVQLPKNMLKKIPQEYFDTSKGTLKLLWEEEWRGLGITQSLG 88

Query: 52  WVHYAIHRPEPHIMLFRRPLNYQ 74
           W HY +H PEPHI+LF+RP+NYQ
Sbjct: 89  WEHYEVHEPEPHILLFKRPINYQ 111


>gi|340924324|gb|EGS19227.1| cyclin-dependent kinases regulatory subunit-like protein
           [Chaetomium thermophilum var. thermophilum DSM 1495]
          Length = 123

 Score = 89.0 bits (219), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/87 (49%), Positives = 54/87 (62%), Gaps = 9/87 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y D  YEYRHV LP  + K +P           +LL E EWR +G+ QS G
Sbjct: 37  IDSIHYSTRYSDSEYEYRHVQLPKAMLKAIPPEYHDKSKGTLKLLWEEEWRGMGITQSLG 96

Query: 52  WVHYAIHRPEPHIMLFRRPLNYQQQQE 78
           W HY +H PEPHI+LF+RPLNYQ  Q+
Sbjct: 97  WEHYEVHEPEPHILLFKRPLNYQPPQQ 123


>gi|242798734|ref|XP_002483230.1| cell cycle regulatory protein Cks/Suc1, putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218716575|gb|EED15996.1| cell cycle regulatory protein Cks/Suc1, putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 115

 Score = 88.6 bits (218), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 41/83 (49%), Positives = 55/83 (66%), Gaps = 9/83 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y D+ YEYRHV LP ++ K +P+          +LL E EWR +G+ QS G
Sbjct: 28  IDAIHYSARYSDNEYEYRHVQLPKNMLKKIPQEYFDTSKGTLKLLWEEEWRGLGITQSLG 87

Query: 52  WVHYAIHRPEPHIMLFRRPLNYQ 74
           W HY +H PEPHI+LF+RP+NYQ
Sbjct: 88  WEHYEVHEPEPHILLFKRPINYQ 110


>gi|345568037|gb|EGX50938.1| hypothetical protein AOL_s00054g674 [Arthrobotrys oligospora ATCC
           24927]
          Length = 113

 Score = 88.6 bits (218), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 8/81 (9%)

Query: 3   QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN--------RLLSETEWRAIGVQQSRGWVH 54
            I YS +Y D  YEYRHV+LP  +  ++P +        ++L E EWR +G+ QS GW H
Sbjct: 30  DINYSARYSDSKYEYRHVMLPKAMLDMIPNDYKDSNGVLKILKEDEWRGLGITQSLGWEH 89

Query: 55  YAIHRPEPHIMLFRRPLNYQQ 75
           Y +H PEPHI+LF+RP NY Q
Sbjct: 90  YEVHAPEPHILLFKRPKNYGQ 110


>gi|171695018|ref|XP_001912433.1| hypothetical protein [Podospora anserina S mat+]
 gi|170947751|emb|CAP59914.1| unnamed protein product [Podospora anserina S mat+]
          Length = 123

 Score = 88.6 bits (218), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/80 (53%), Positives = 53/80 (66%), Gaps = 9/80 (11%)

Query: 7   SEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVHYAI 57
           S  Y D+ YEYRHV LP  + K +PK+         +LL E EWRA+G+ QS GW HY +
Sbjct: 44  SASYNDNEYEYRHVQLPKAMLKAIPKDYHDQSKGTLKLLWEEEWRAMGITQSLGWEHYEV 103

Query: 58  HRPEPHIMLFRRPLNYQQQQ 77
           H PEPHI+LF+RPLNYQ  Q
Sbjct: 104 HEPEPHILLFKRPLNYQPPQ 123


>gi|307192571|gb|EFN75759.1| Cyclin-dependent kinases regulatory subunit 1 [Harpegnathos
          saltator]
          Length = 59

 Score = 88.6 bits (218), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 38/59 (64%), Positives = 49/59 (83%)

Query: 18 RHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQ 76
          RHVVLP ++ KL+P+  LLSE EWRAIGVQQS+GWVHY IH PEPHI+LF+R +  +++
Sbjct: 1  RHVVLPKELVKLVPRTHLLSEQEWRAIGVQQSQGWVHYMIHEPEPHILLFKRKITQEEK 59


>gi|315046040|ref|XP_003172395.1| cyclin-dependent kinase regulatory subunit [Arthroderma gypseum CBS
           118893]
 gi|311342781|gb|EFR01984.1| cyclin-dependent kinase regulatory subunit [Arthroderma gypseum CBS
           118893]
          Length = 114

 Score = 88.2 bits (217), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 9/80 (11%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y D  YEYRHV LP ++ K +P           +LL E EWR +G+ QS GW H
Sbjct: 30  IHYSARYSDSEYEYRHVQLPKNMLKKIPTEYFDHSKGTLKLLWEEEWRGLGITQSLGWEH 89

Query: 55  YAIHRPEPHIMLFRRPLNYQ 74
           Y +H PEPHI+LF+RP+NYQ
Sbjct: 90  YEVHEPEPHILLFKRPVNYQ 109


>gi|429851270|gb|ELA26473.1| cyclin-dependent kinases regulatory subunit [Colletotrichum
           gloeosporioides Nara gc5]
          Length = 124

 Score = 88.2 bits (217), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 41/82 (50%), Positives = 54/82 (65%), Gaps = 9/82 (10%)

Query: 5   QYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVHY 55
            ++ +Y D  +EYRHV LP  + K +PK+         +LL E EWRA+G+ QS GW HY
Sbjct: 43  SFTSRYSDSEFEYRHVQLPKAMLKAIPKDYHDASHGTLKLLWEEEWRALGITQSLGWEHY 102

Query: 56  AIHRPEPHIMLFRRPLNYQQQQ 77
            +H PEPHI+LF+RPLNYQ  Q
Sbjct: 103 EVHEPEPHILLFKRPLNYQPPQ 124


>gi|449271073|gb|EMC81666.1| Cyclin-dependent kinases regulatory subunit 2, partial [Columba
          livia]
          Length = 61

 Score = 88.2 bits (217), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 39/61 (63%), Positives = 50/61 (81%)

Query: 17 YRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQ 76
          YRHV+LP +++K +PK+ L+SE EWR +GVQQS GWVHY IH PEPHI+LFRRPL   +Q
Sbjct: 1  YRHVMLPRELSKQVPKSHLMSEEEWRRLGVQQSLGWVHYMIHEPEPHILLFRRPLAKDEQ 60

Query: 77 Q 77
          +
Sbjct: 61 K 61


>gi|302924738|ref|XP_003053956.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256734897|gb|EEU48243.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 114

 Score = 87.8 bits (216), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 42/86 (48%), Positives = 55/86 (63%), Gaps = 9/86 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y D  +EYRHV LP  + K +PK+         +LL E EWRA+G+ QS G
Sbjct: 29  IDSIHYSARYSDSEFEYRHVQLPKAMLKAIPKDYHDTAKGTLKLLWEEEWRALGITQSLG 88

Query: 52  WVHYAIHRPEPHIMLFRRPLNYQQQQ 77
           W HY +H PEPHI+LF+R LN+Q  Q
Sbjct: 89  WEHYEVHEPEPHILLFKRELNFQPPQ 114


>gi|154285926|ref|XP_001543758.1| hypothetical protein HCAG_00804 [Ajellomyces capsulatus NAm1]
 gi|150407399|gb|EDN02940.1| hypothetical protein HCAG_00804 [Ajellomyces capsulatus NAm1]
 gi|225558275|gb|EEH06559.1| cyclin-dependent protein kinase regulatory subunit [Ajellomyces
           capsulatus G186AR]
 gi|240277231|gb|EER40740.1| cyclin-dependent kinase regulatory subunit [Ajellomyces capsulatus
           H143]
 gi|325094050|gb|EGC47360.1| cyclin-dependent protein kinase [Ajellomyces capsulatus H88]
          Length = 113

 Score = 87.8 bits (216), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 53/80 (66%), Gaps = 9/80 (11%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y D  +EYRHV LP ++ K +P +         +LL E EWR +G+ QS GW H
Sbjct: 30  IHYSARYSDSEFEYRHVQLPKNMLKKIPTDYFDTSKGTLKLLWEEEWRGLGITQSLGWEH 89

Query: 55  YAIHRPEPHIMLFRRPLNYQ 74
           Y +H PEPHI+LF+RP+NYQ
Sbjct: 90  YEVHEPEPHILLFKRPINYQ 109


>gi|367018600|ref|XP_003658585.1| hypothetical protein MYCTH_44554 [Myceliophthora thermophila ATCC
           42464]
 gi|347005852|gb|AEO53340.1| hypothetical protein MYCTH_44554 [Myceliophthora thermophila ATCC
           42464]
          Length = 112

 Score = 87.8 bits (216), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 42/86 (48%), Positives = 54/86 (62%), Gaps = 9/86 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y D+ +EYRHV LP  + K +P           +LL E EWR +G+ QS G
Sbjct: 27  IDSIHYSTRYSDNEFEYRHVQLPKAMLKAIPPEYHDKSKGTLKLLWEDEWRGMGITQSLG 86

Query: 52  WVHYAIHRPEPHIMLFRRPLNYQQQQ 77
           W HY +H PEPHI+LF+RPLNYQ  Q
Sbjct: 87  WEHYEVHEPEPHILLFKRPLNYQPPQ 112


>gi|261201704|ref|XP_002628066.1| cell cycle regulatory protein Cks/Suc1 [Ajellomyces dermatitidis
           SLH14081]
 gi|239590163|gb|EEQ72744.1| cell cycle regulatory protein Cks/Suc1 [Ajellomyces dermatitidis
           SLH14081]
 gi|239611878|gb|EEQ88865.1| cell cycle regulatory protein Cks/Suc1 [Ajellomyces dermatitidis
           ER-3]
 gi|327352870|gb|EGE81727.1| cyclin-dependent protein kinase regulatory subunit [Ajellomyces
           dermatitidis ATCC 18188]
          Length = 113

 Score = 87.8 bits (216), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 40/83 (48%), Positives = 54/83 (65%), Gaps = 9/83 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y D+ +EYRHV LP  + K +P +         +LL E EWR +G+ QS G
Sbjct: 27  IDSIHYSSRYSDNEFEYRHVQLPKHMLKKIPADYFDTSKGTLKLLWEEEWRGLGITQSLG 86

Query: 52  WVHYAIHRPEPHIMLFRRPLNYQ 74
           W HY +H PEPHI+LF+RP+NYQ
Sbjct: 87  WEHYEVHEPEPHILLFKRPINYQ 109


>gi|328769473|gb|EGF79517.1| hypothetical protein BATDEDRAFT_12203, partial [Batrachochytrium
          dendrobatidis JAM81]
          Length = 84

 Score = 87.4 bits (215), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 41/79 (51%), Positives = 51/79 (64%), Gaps = 6/79 (7%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
           + YS KY DD YEYRHV +P  +       RLL+E EWR  G++QS GWVHY IH PEP
Sbjct: 2  DVYYSPKYNDDLYEYRHVTVPKQIG------RLLAEYEWRGFGIKQSPGWVHYMIHNPEP 55

Query: 63 HIMLFRRPLNYQQQQENQA 81
          HI+LFRR  ++Q +  N  
Sbjct: 56 HILLFRREKDFQIKYPNAT 74


>gi|326471950|gb|EGD95959.1| cyclin-dependent kinase regulatory subunit [Trichophyton tonsurans
           CBS 112818]
 gi|326477184|gb|EGE01194.1| cyclin-dependent kinase regulatory subunit [Trichophyton equinum
           CBS 127.97]
          Length = 114

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 9/80 (11%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y D+ YEYRHV LP  + K +P           +LL E EWR +G+ QS GW H
Sbjct: 30  IHYSARYSDNEYEYRHVQLPKPMLKKIPTEYFDHSKGTLKLLWEEEWRGLGITQSLGWEH 89

Query: 55  YAIHRPEPHIMLFRRPLNYQ 74
           Y +H PEPHI+LF+RP+NYQ
Sbjct: 90  YEVHEPEPHILLFKRPVNYQ 109


>gi|327304943|ref|XP_003237163.1| cyclin-dependent kinase regulatory subunit [Trichophyton rubrum CBS
           118892]
 gi|326460161|gb|EGD85614.1| cyclin-dependent kinase regulatory subunit [Trichophyton rubrum CBS
           118892]
          Length = 114

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 9/80 (11%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y D+ YEYRHV LP  + K +P           +LL E EWR +G+ QS GW H
Sbjct: 30  IHYSARYSDNEYEYRHVQLPKPMLKKIPTEYFDHSKGTLKLLWEEEWRGLGITQSLGWEH 89

Query: 55  YAIHRPEPHIMLFRRPLNYQ 74
           Y +H PEPHI+LF+RP+NYQ
Sbjct: 90  YEVHEPEPHILLFKRPVNYQ 109


>gi|295659833|ref|XP_002790474.1| cyclin-dependent kinases regulatory subunit [Paracoccidioides sp.
           'lutzii' Pb01]
 gi|225679505|gb|EEH17789.1| cyclin-dependent kinases regulatory subunit [Paracoccidioides
           brasiliensis Pb03]
 gi|226281651|gb|EEH37217.1| cyclin-dependent kinases regulatory subunit [Paracoccidioides sp.
           'lutzii' Pb01]
 gi|226291237|gb|EEH46665.1| cyclin-dependent kinases regulatory subunit [Paracoccidioides
           brasiliensis Pb18]
          Length = 113

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 53/80 (66%), Gaps = 9/80 (11%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y D  +EYRHV LP ++ K +P +         +LL E EWR +G+ QS GW H
Sbjct: 30  IHYSSRYSDSEFEYRHVQLPKNMLKNIPTDYFDHSKGTLKLLWEEEWRGLGITQSLGWEH 89

Query: 55  YAIHRPEPHIMLFRRPLNYQ 74
           Y +H PEPHI+LF+RP+NYQ
Sbjct: 90  YEVHEPEPHILLFKRPINYQ 109


>gi|319411562|emb|CBQ73606.1| probable CKS1-cyclin-dependent kinases regulatory subunit
          [Sporisorium reilianum SRZ2]
          Length = 119

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/81 (50%), Positives = 55/81 (67%), Gaps = 10/81 (12%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN----------RLLSETEWRAIGVQQSRGW 52
          +I YS+KY DD +EYRHV+LP  + KLLP++          R+L+  EWR IG+ QS GW
Sbjct: 18 RIHYSDKYNDDEWEYRHVILPKPMLKLLPESFFDPSEPGVLRILTVKEWRDIGITQSMGW 77

Query: 53 VHYAIHRPEPHIMLFRRPLNY 73
           HY +H PEPHI+LFRR  ++
Sbjct: 78 EHYEVHAPEPHILLFRREKDF 98


>gi|119195793|ref|XP_001248500.1| hypothetical protein CIMG_02271 [Coccidioides immitis RS]
 gi|320040290|gb|EFW22223.1| cyclin-dependent kinase regulatory subunit [Coccidioides posadasii
           str. Silveira]
          Length = 113

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 40/83 (48%), Positives = 53/83 (63%), Gaps = 9/83 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y D  +EYRHV LP ++ K +P           +LL E EWR +G+ QS G
Sbjct: 27  IDSIHYSSRYSDSEFEYRHVQLPKNMLKKIPPEYFDQSKGTLKLLWEEEWRGLGITQSLG 86

Query: 52  WVHYAIHRPEPHIMLFRRPLNYQ 74
           W HY +H PEPHI+LF+RP+NYQ
Sbjct: 87  WEHYEVHEPEPHILLFKRPINYQ 109


>gi|392862296|gb|EAS37070.2| cyclin-dependent kinase regulatory subunit [Coccidioides immitis
           RS]
          Length = 117

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 40/83 (48%), Positives = 53/83 (63%), Gaps = 9/83 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y D  +EYRHV LP ++ K +P           +LL E EWR +G+ QS G
Sbjct: 31  IDSIHYSSRYSDSEFEYRHVQLPKNMLKKIPPEYFDQSKGTLKLLWEEEWRGLGITQSLG 90

Query: 52  WVHYAIHRPEPHIMLFRRPLNYQ 74
           W HY +H PEPHI+LF+RP+NYQ
Sbjct: 91  WEHYEVHEPEPHILLFKRPINYQ 113


>gi|3108169|gb|AAC15771.1| Cdc2 binding protein Suc1 [Pneumocystis carinii]
 gi|3108171|gb|AAC15772.1| Cdc2 binding protein Suc1 [Pneumocystis carinii]
          Length = 114

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/89 (48%), Positives = 56/89 (62%), Gaps = 13/89 (14%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y DDT+EYRHV+LP  + K +PK+         ++L E EWR +G+ QS GW H
Sbjct: 28  IHYSTRYSDDTHEYRHVILPKPMLKAIPKDYFNQETGTLKILHEEEWRGLGITQSLGWQH 87

Query: 55  YAIHRPEPHIMLFRRPLNYQQQQENQAQQ 83
           Y IH PEPHI+LF+R  +    Q   AQQ
Sbjct: 88  YEIHVPEPHILLFKRKCD----QGKHAQQ 112


>gi|281344470|gb|EFB20054.1| hypothetical protein PANDA_008307 [Ailuropoda melanoleuca]
          Length = 62

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/58 (65%), Positives = 47/58 (81%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          QI YS+KYFD+ YEYRHV+LP +++K +PK  L+SE EWR +GVQQS GWVHY IH P
Sbjct: 5  QIYYSDKYFDEHYEYRHVMLPRELSKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEP 62


>gi|345315796|ref|XP_001507511.2| PREDICTED: cyclin-dependent kinases regulatory subunit 1-like
          [Ornithorhynchus anatinus]
          Length = 57

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 37/51 (72%), Positives = 45/51 (88%)

Query: 21 VLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPL 71
          +LP D+AKL+PK  L+SE+EWR +GVQQS+GWVHY IH PEPHI+LFRRPL
Sbjct: 1  MLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEPHILLFRRPL 51


>gi|119573545|gb|EAW53160.1| CDC28 protein kinase regulatory subunit 1B, isoform CRA_a [Homo
          sapiens]
 gi|119573546|gb|EAW53161.1| CDC28 protein kinase regulatory subunit 1B, isoform CRA_a [Homo
          sapiens]
 gi|119573547|gb|EAW53162.1| CDC28 protein kinase regulatory subunit 1B, isoform CRA_a [Homo
          sapiens]
 gi|119573548|gb|EAW53163.1| CDC28 protein kinase regulatory subunit 1B, isoform CRA_a [Homo
          sapiens]
 gi|119573551|gb|EAW53166.1| CDC28 protein kinase regulatory subunit 1B, isoform CRA_a [Homo
          sapiens]
 gi|344241999|gb|EGV98102.1| Cyclin-dependent kinases regulatory subunit 1 [Cricetulus
          griseus]
          Length = 57

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 37/51 (72%), Positives = 45/51 (88%)

Query: 21 VLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPL 71
          +LP D+AKL+PK  L+SE+EWR +GVQQS+GWVHY IH PEPHI+LFRRPL
Sbjct: 1  MLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEPHILLFRRPL 51


>gi|50556364|ref|XP_505590.1| YALI0F18700p [Yarrowia lipolytica]
 gi|49651460|emb|CAG78399.1| YALI0F18700p [Yarrowia lipolytica CLIB122]
          Length = 99

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 38/75 (50%), Positives = 51/75 (68%), Gaps = 9/75 (12%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
          I YS +Y DDT+EYRHV+LP ++ K +P++         R+L E EWR +G+ QS GW H
Sbjct: 23 IHYSTRYSDDTFEYRHVMLPKNMLKAIPRDYFNSETGTLRILLEEEWRGLGITQSLGWEH 82

Query: 55 YAIHRPEPHIMLFRR 69
          Y  H PEPHI+LF+R
Sbjct: 83 YETHAPEPHILLFKR 97


>gi|307183881|gb|EFN70492.1| Cyclin-dependent kinases regulatory subunit 1 [Camponotus
          floridanus]
          Length = 75

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 36/53 (67%), Positives = 45/53 (84%)

Query: 17 YRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHIMLFRR 69
          YRHV+LP D+AK +PK  L++ETEWR +GVQQS GWVHY +H PEPH++LFRR
Sbjct: 1  YRHVILPFDLAKYVPKTHLMTETEWRNLGVQQSPGWVHYMMHGPEPHVLLFRR 53


>gi|355753456|gb|EHH57502.1| Cyclin-dependent kinases regulatory subunit 2, partial [Macaca
          fascicularis]
          Length = 60

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 39/60 (65%), Positives = 48/60 (80%)

Query: 18 RHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQ 77
          RHV+LP +++K +PK  L+SE EWR +GVQQS GWVHY IH PEPHI+LFRRPL   QQ+
Sbjct: 1  RHVMLPRELSKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEPEPHILLFRRPLPKDQQK 60


>gi|118375604|ref|XP_001020986.1| Cyclin-dependent kinase regulatory subunit family protein
          [Tetrahymena thermophila]
 gi|89302753|gb|EAS00741.1| Cyclin-dependent kinase regulatory subunit family protein
          [Tetrahymena thermophila SB210]
          Length = 79

 Score = 85.5 bits (210), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 32/73 (43%), Positives = 56/73 (76%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          +I+YS+ Y DD Y YR+V LP D+ K +PK ++++E  WR++G++ S+GW H+ +++PEP
Sbjct: 7  EIEYSDTYNDDAYFYRNVRLPQDLYKKIPKGKIMTEDVWRSLGIKSSKGWQHFYVYKPEP 66

Query: 63 HIMLFRRPLNYQQ 75
           I++ R+P+N+Q 
Sbjct: 67 FIIMLRKPVNFQN 79


>gi|1310782|pdb|1SCE|A Chain A, Crystal Structure Of The Cell Cycle Regulatory Protein
           Suc1 Reveals A Novel Beta-Hinge Conformational Switch
 gi|1310783|pdb|1SCE|B Chain B, Crystal Structure Of The Cell Cycle Regulatory Protein
           Suc1 Reveals A Novel Beta-Hinge Conformational Switch
 gi|1310784|pdb|1SCE|C Chain C, Crystal Structure Of The Cell Cycle Regulatory Protein
           Suc1 Reveals A Novel Beta-Hinge Conformational Switch
 gi|1310785|pdb|1SCE|D Chain D, Crystal Structure Of The Cell Cycle Regulatory Protein
           Suc1 Reveals A Novel Beta-Hinge Conformational Switch
          Length = 112

 Score = 85.5 bits (210), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 9/90 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           + QI YS +Y DD YEYRHV+LP  + K +P +         R+L E EWR +G+ QS G
Sbjct: 22  IDQIHYSPRYADDEYEYRHVMLPKAMLKAIPTDYFNPETGTLRILQEEEWRGLGITQSLG 81

Query: 52  WVHYAIHRPEPHIMLFRRPLNYQQQQENQA 81
           W  Y +H PEPHI+LF+R  +YQ + + + 
Sbjct: 82  WEMYEVHVPEPHILLFKREKDYQMKSQQRG 111


>gi|254569558|ref|XP_002491889.1| Cyclin-dependent protein kinase regulatory subunit and adaptor
          [Komagataella pastoris GS115]
 gi|238031686|emb|CAY69609.1| Cyclin-dependent protein kinase regulatory subunit and adaptor
          [Komagataella pastoris GS115]
 gi|328351611|emb|CCA38010.1| Cyclin-dependent kinases regulatory subunit [Komagataella
          pastoris CBS 7435]
          Length = 99

 Score = 85.5 bits (210), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 39/77 (50%), Positives = 51/77 (66%), Gaps = 9/77 (11%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
          I YS +Y DD YEYRHV+LP  + K++P++         R+L E EWR +G+ QS GW H
Sbjct: 22 IHYSARYSDDQYEYRHVILPKQMLKVIPQDYFNSETGTLRILLEEEWRGLGITQSLGWYH 81

Query: 55 YAIHRPEPHIMLFRRPL 71
          Y  H PEPHI+LF+R L
Sbjct: 82 YETHAPEPHILLFKRDL 98


>gi|213401891|ref|XP_002171718.1| cyclin-dependent protein kinase regulatory subunit Suc1
           [Schizosaccharomyces japonicus yFS275]
 gi|211999765|gb|EEB05425.1| cyclin-dependent protein kinase regulatory subunit Suc1
           [Schizosaccharomyces japonicus yFS275]
          Length = 111

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 39/83 (46%), Positives = 55/83 (66%), Gaps = 9/83 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           + QI YS +Y DD +EYRHV+LP  + K++P++         R+L E EWR +G+ QS G
Sbjct: 22  IDQIHYSPRYADDEFEYRHVMLPKAMLKVIPRDYFNPETGTLRILKEEEWRGLGITQSLG 81

Query: 52  WVHYAIHRPEPHIMLFRRPLNYQ 74
           W  Y +H PEPHI+LF+R  +YQ
Sbjct: 82  WEMYEVHVPEPHILLFKREKDYQ 104


>gi|159031817|dbj|BAF91880.1| cyclin dependent kinase regulatory subunit homolog [Blepharisma
          japonicum]
          Length = 120

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 35/70 (50%), Positives = 48/70 (68%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          +I+YSEKY+D  +EYR V+ P +    L +  L+ + EWR  GVQ S+GW HY  H PEP
Sbjct: 14 KIEYSEKYYDSVWEYRQVIFPKEWGMRLMERGLMPDEEWRGYGVQMSKGWYHYGSHPPEP 73

Query: 63 HIMLFRRPLN 72
          H++LFRRP+ 
Sbjct: 74 HVLLFRRPIG 83


>gi|19112223|ref|NP_595431.1| cyclin-dependent protein kinase regulatory subunit Suc1
           [Schizosaccharomyces pombe 972h-]
 gi|135024|sp|P08463.3|CKS1_SCHPO RecName: Full=Cyclin-dependent kinases regulatory subunit; AltName:
           Full=P13
 gi|173495|gb|AAA35346.1| cell division protein [Schizosaccharomyces pombe]
 gi|3738172|emb|CAA21308.1| cyclin-dependent protein kinase regulatory subunit Suc1
           [Schizosaccharomyces pombe]
          Length = 113

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 55/89 (61%), Gaps = 9/89 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           + QI YS +Y DD YEYRHV+LP  + K +P +         R+L E EWR +G+ QS G
Sbjct: 22  IDQIHYSPRYADDEYEYRHVMLPKAMLKAIPTDYFNPETGTLRILQEEEWRGLGITQSLG 81

Query: 52  WVHYAIHRPEPHIMLFRRPLNYQQQQENQ 80
           W  Y +H PEPHI+LF+R  +YQ +   Q
Sbjct: 82  WEMYEVHVPEPHILLFKREKDYQMKFSQQ 110


>gi|296806349|ref|XP_002843984.1| cyclin-dependent kinase regulatory subunit [Arthroderma otae CBS
           113480]
 gi|238845286|gb|EEQ34948.1| cyclin-dependent kinase regulatory subunit [Arthroderma otae CBS
           113480]
          Length = 114

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 51/80 (63%), Gaps = 9/80 (11%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y D  YEYRHV LP  + K +P           +LL E EWR +G+ QS GW H
Sbjct: 30  IHYSPRYSDSEYEYRHVQLPKPMLKKIPNEYFDHAKGTLKLLWEEEWRGLGITQSLGWEH 89

Query: 55  YAIHRPEPHIMLFRRPLNYQ 74
           Y +H PEPHI+LF+RP+NY+
Sbjct: 90  YEVHEPEPHILLFKRPVNYK 109


>gi|157833583|pdb|1PUC|A Chain A, P13suc1 In A Strand-Exchanged Dimer
          Length = 105

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 40/85 (47%), Positives = 54/85 (63%), Gaps = 9/85 (10%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           + QI YS +Y DD YEYRHV+LP  + K +P +         R+L E EWR +G+ QS G
Sbjct: 21  IDQIHYSPRYADDEYEYRHVMLPKAMLKAIPTDYFNPETGTLRILQEEEWRGLGITQSLG 80

Query: 52  WVHYAIHRPEPHIMLFRRPLNYQQQ 76
           W  Y +H PEPHI+LF+R  +YQ +
Sbjct: 81  WEMYEVHVPEPHILLFKREKDYQMK 105


>gi|330921798|ref|XP_003299568.1| hypothetical protein PTT_10592 [Pyrenophora teres f. teres 0-1]
 gi|311326703|gb|EFQ92344.1| hypothetical protein PTT_10592 [Pyrenophora teres f. teres 0-1]
          Length = 150

 Score = 84.3 bits (207), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 39/74 (52%), Positives = 50/74 (67%), Gaps = 9/74 (12%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I YS +Y DD YEYRHV LP  + K++PK+         +LL E EWRA+G+ QS GW H
Sbjct: 34  IHYSARYSDDAYEYRHVQLPKQMLKVIPKDYFDGARGTLKLLWEEEWRALGITQSLGWEH 93

Query: 55  YAIHRPEPHIMLFR 68
           Y +H PEPHI+LF+
Sbjct: 94  YEVHEPEPHILLFK 107


>gi|320591156|gb|EFX03595.1| oxidoreductin [Grosmannia clavigera kw1407]
          Length = 697

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 38/76 (50%), Positives = 50/76 (65%), Gaps = 9/76 (11%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS++Y DD YEYRHV+LP  + KL+P           +LL E EWR++G+ QS G
Sbjct: 36  LDNIHYSQRYSDDEYEYRHVLLPKQMLKLIPDQYLDQSKKTLKLLWEDEWRSMGITQSLG 95

Query: 52  WVHYAIHRPEPHIMLF 67
           W HY +H PEPHI+LF
Sbjct: 96  WEHYEVHEPEPHILLF 111


>gi|290984757|ref|XP_002675093.1| cyclin-dependent kinase regulatory subunit-like protein
          [Naegleria gruberi]
 gi|284088687|gb|EFC42349.1| cyclin-dependent kinase regulatory subunit-like protein
          [Naegleria gruberi]
          Length = 102

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 51/72 (70%), Gaps = 3/72 (4%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPK-NRLLSETEWRAIGVQQSRGWVHYAI--HR 59
          +I YS+KY+DD YEYRHV+LP  +A+ +    RLL+E EWR +G+Q SRGWVHY      
Sbjct: 6  EIYYSDKYYDDEYEYRHVILPEKLAECIQNCERLLAEKEWRGLGIQMSRGWVHYGYSPSS 65

Query: 60 PEPHIMLFRRPL 71
           E HI+LF+R +
Sbjct: 66 SEQHILLFKREI 77


>gi|401887636|gb|EJT51616.1| hypothetical protein A1Q1_07166 [Trichosporon asahii var. asahii
          CBS 2479]
          Length = 119

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/72 (51%), Positives = 51/72 (70%), Gaps = 1/72 (1%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          +I YS++Y DD +EYRHV+LP  + K +P   L  ET WR++G++QS GW  Y  H PEP
Sbjct: 21 KIFYSDRYSDDEWEYRHVILPKQLWKFVPSGVLPEET-WRSLGIRQSPGWEMYMCHGPEP 79

Query: 63 HIMLFRRPLNYQ 74
          H++LFRRP +Y 
Sbjct: 80 HVLLFRRPKDYD 91


>gi|449443594|ref|XP_004139562.1| PREDICTED: cyclin-dependent kinases regulatory subunit 2-like
          [Cucumis sativus]
          Length = 59

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 48/51 (94%), Positives = 49/51 (96%)

Query: 38 ETEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQNILAK 88
          + EWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQ ILAK
Sbjct: 9  QNEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK 59


>gi|300176179|emb|CBK23490.2| unnamed protein product [Blastocystis hominis]
          Length = 102

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 52/74 (70%), Gaps = 2/74 (2%)

Query: 1  MGQI--QYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIH 58
          M QI  QY + + D+ YEYR V++  +   L+PK +L+SE EWR++G+Q S GW HY  +
Sbjct: 1  MSQIVYQYGKPFNDEEYEYRQVIIKKEAVGLIPKGKLMSEREWRSLGIQMSLGWEHYLEY 60

Query: 59 RPEPHIMLFRRPLN 72
          +PE +++LFRRPL 
Sbjct: 61 KPESNVLLFRRPLG 74


>gi|340515385|gb|EGR45640.1| predicted protein [Trichoderma reesei QM6a]
          Length = 103

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/74 (52%), Positives = 50/74 (67%), Gaps = 9/74 (12%)

Query: 4   IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVH 54
           I+YSE+Y DD +EYRHV LP  + K +PK          +LL E EWRA+G+ QS GW H
Sbjct: 30  IRYSERYSDDEFEYRHVQLPKMMLKAIPKEYHDSAKGTLKLLWEDEWRAMGMTQSLGWEH 89

Query: 55  YAIHRPEPHIMLFR 68
           Y +H PEPHI+LF+
Sbjct: 90  YEVHEPEPHILLFK 103


>gi|322704818|gb|EFY96409.1| cyclin-dependent kinases regulatory subunit [Metarhizium anisopliae
           ARSEF 23]
          Length = 120

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/76 (51%), Positives = 48/76 (63%), Gaps = 9/76 (11%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y D  YEYRHV LP  + K +PK+         +LL E EWRAIG+ QS G
Sbjct: 27  IDSIHYSARYSDSEYEYRHVQLPKAMLKAIPKDYHDTSKGTLKLLWEEEWRAIGITQSLG 86

Query: 52  WVHYAIHRPEPHIMLF 67
           W HY +H PEPHI+LF
Sbjct: 87  WEHYEVHEPEPHILLF 102


>gi|321260428|ref|XP_003194934.1| hypothetical protein CGB_F5130C [Cryptococcus gattii WM276]
 gi|317461406|gb|ADV23147.1| Hypothetical Protein CGB_F5130C [Cryptococcus gattii WM276]
          Length = 125

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 35/73 (47%), Positives = 50/73 (68%), Gaps = 1/73 (1%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          +I YS +Y +D +E+RHV++P  + K +P   + +E  WR IG++QS GW  Y  H PEP
Sbjct: 25 KIHYSARYSNDEWEFRHVIIPKPLVKFIPPG-VCAEEVWRGIGIRQSPGWEMYMRHEPEP 83

Query: 63 HIMLFRRPLNYQQ 75
          H++LFRRP NY Q
Sbjct: 84 HVLLFRRPKNYDQ 96


>gi|301770175|ref|XP_002920507.1| PREDICTED: LOW QUALITY PROTEIN: cyclin-dependent kinases regulatory
           subunit 2-like [Ailuropoda melanoleuca]
          Length = 154

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 38/75 (50%), Positives = 51/75 (68%)

Query: 3   QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
           QI Y +KYF   ++Y HV+ P +++K +P   L+SE EWR +GVQ S GWVHY  H P+P
Sbjct: 80  QIYYLDKYFRKYHKYGHVMXPRELSKQVPTTHLMSEEEWRRLGVQXSLGWVHYMTHEPKP 139

Query: 63  HIMLFRRPLNYQQQQ 77
            I+LFR PL   QQ+
Sbjct: 140 CILLFRPPLLKDQQK 154


>gi|406699651|gb|EKD02850.1| hypothetical protein A1Q2_02794 [Trichosporon asahii var. asahii
          CBS 8904]
          Length = 119

 Score = 81.3 bits (199), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 37/71 (52%), Positives = 51/71 (71%), Gaps = 1/71 (1%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          +I YS++Y DD +EYRHV+LP  + K +P   L  ET WR++G++QS GW  Y  H PEP
Sbjct: 21 KIFYSDRYSDDEWEYRHVILPKQLWKFVPSGVLPEET-WRSLGIRQSPGWEMYMRHGPEP 79

Query: 63 HIMLFRRPLNY 73
          H++LFRRP +Y
Sbjct: 80 HVLLFRRPKDY 90


>gi|121719593|ref|XP_001276495.1| cyclin-dependent kinases regulatory subunit [Aspergillus clavatus
           NRRL 1]
 gi|119404707|gb|EAW15069.1| cyclin-dependent kinases regulatory subunit [Aspergillus clavatus
           NRRL 1]
          Length = 133

 Score = 80.9 bits (198), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 37/77 (48%), Positives = 50/77 (64%), Gaps = 9/77 (11%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y DD +EYRHV LP ++ K +P +         +LL E EWRA+G+ QS G
Sbjct: 57  IDSIHYSARYSDDQFEYRHVQLPKNMLKKIPADYFDSSKGTLKLLWEDEWRALGITQSLG 116

Query: 52  WVHYAIHRPEPHIMLFR 68
           W HY +H PEPHI+LF+
Sbjct: 117 WEHYEVHEPEPHILLFK 133


>gi|134113296|ref|XP_774673.1| hypothetical protein CNBF3520 [Cryptococcus neoformans var.
          neoformans B-3501A]
 gi|50257317|gb|EAL20026.1| hypothetical protein CNBF3520 [Cryptococcus neoformans var.
          neoformans B-3501A]
          Length = 124

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 1/73 (1%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          +I YS +Y +D +E+RHV++P  + + +P   + +E  WR IG++QS GW  Y  H PEP
Sbjct: 25 KIHYSARYSNDEWEFRHVIIPKPLVRFIPPG-VCAEEVWRGIGIRQSPGWEMYMRHEPEP 83

Query: 63 HIMLFRRPLNYQQ 75
          H++LFRRP NY Q
Sbjct: 84 HVLLFRRPKNYDQ 96


>gi|148709155|gb|EDL41101.1| mCG1274, isoform CRA_a [Mus musculus]
 gi|148709156|gb|EDL41102.1| mCG1274, isoform CRA_a [Mus musculus]
 gi|149045002|gb|EDL98088.1| similar to Cyclin-dependent kinases regulatory subunit 2 (CKS-2)
          (predicted), isoform CRA_a [Rattus norvegicus]
 gi|149045003|gb|EDL98089.1| similar to Cyclin-dependent kinases regulatory subunit 2 (CKS-2)
          (predicted), isoform CRA_a [Rattus norvegicus]
 gi|344242167|gb|EGV98270.1| Cyclin-dependent kinases regulatory subunit 2 [Cricetulus
          griseus]
          Length = 57

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 36/57 (63%), Positives = 46/57 (80%)

Query: 21 VLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQ 77
          +LP +++K +PK  L+SE EWR +GVQQS GWVHY IH PEPHI+LFRRPL  +QQ+
Sbjct: 1  MLPRELSKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEPEPHILLFRRPLPKEQQK 57


>gi|405121403|gb|AFR96172.1| hypothetical protein CNAG_05853 [Cryptococcus neoformans var.
          grubii H99]
          Length = 124

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 1/73 (1%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          +I YS +Y +D +E+RHV++P  + + +P   + +E  WR IG++QS GW  Y  H PEP
Sbjct: 25 KIHYSARYSNDEWEFRHVIIPKPLVRFIPPG-VCAEEVWRGIGIRQSPGWEMYMRHEPEP 83

Query: 63 HIMLFRRPLNYQQ 75
          H++LFRRP NY Q
Sbjct: 84 HVLLFRRPKNYDQ 96


>gi|58268212|ref|XP_571262.1| hypothetical protein [Cryptococcus neoformans var. neoformans
          JEC21]
 gi|57227497|gb|AAW43955.1| expressed protein [Cryptococcus neoformans var. neoformans JEC21]
          Length = 124

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 1/73 (1%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          +I YS +Y +D +E+RHV++P  + + +P   + +E  WR IG++QS GW  Y  H PEP
Sbjct: 25 KIHYSARYSNDEWEFRHVIIPKPLVRFIPPG-VCAEEVWRGIGIRQSPGWEMYMRHEPEP 83

Query: 63 HIMLFRRPLNYQQ 75
          H++LFRRP NY Q
Sbjct: 84 HVLLFRRPKNYDQ 96


>gi|146324719|ref|XP_747199.2| cell cycle regulatory protein Cks/Suc1 [Aspergillus fumigatus
           Af293]
 gi|129556120|gb|EAL85161.2| cell cycle regulatory protein Cks/Suc1, putative [Aspergillus
           fumigatus Af293]
 gi|159123797|gb|EDP48916.1| cell cycle regulatory protein Cks/Suc1, putative [Aspergillus
           fumigatus A1163]
          Length = 103

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/77 (48%), Positives = 50/77 (64%), Gaps = 9/77 (11%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y DD +EYRHV LP ++ K +P +         +LL E EWRA+G+ QS G
Sbjct: 27  IDSIHYSARYSDDQFEYRHVQLPKNMLKKIPADYFDSSKGTLKLLWEEEWRALGITQSLG 86

Query: 52  WVHYAIHRPEPHIMLFR 68
           W HY +H PEPHI+LF+
Sbjct: 87  WEHYEVHEPEPHILLFK 103


>gi|350633249|gb|EHA21615.1| hypothetical protein ASPNIDRAFT_193941 [Aspergillus niger ATCC
           1015]
          Length = 103

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/77 (48%), Positives = 50/77 (64%), Gaps = 9/77 (11%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y DD +EYRHV LP ++ K +P +         +LL E EWRA+G+ QS G
Sbjct: 27  IDSIHYSARYSDDQFEYRHVQLPKNMLKKIPADYFDSSKGTLKLLWEDEWRALGITQSLG 86

Query: 52  WVHYAIHRPEPHIMLFR 68
           W HY +H PEPHI+LF+
Sbjct: 87  WEHYEVHEPEPHILLFK 103


>gi|75858932|ref|XP_868806.1| hypothetical protein AN9424.2 [Aspergillus nidulans FGSC A4]
 gi|40747685|gb|EAA66841.1| hypothetical protein AN9424.2 [Aspergillus nidulans FGSC A4]
 gi|259486708|tpe|CBF84782.1| TPA: cell cycle regulatory protein Cks/Suc1, putative
           (AFU_orthologue; AFUA_8G03920) [Aspergillus nidulans
           FGSC A4]
          Length = 146

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 9/76 (11%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y DD +EYRHV LP ++ K +P +         +LL E EWRA+G+ QS G
Sbjct: 27  IDSIHYSARYSDDQFEYRHVQLPKNMLKKIPADYFDSSKGTLKLLWEEEWRALGITQSLG 86

Query: 52  WVHYAIHRPEPHIMLF 67
           W HY +H PEPHI+LF
Sbjct: 87  WEHYEVHEPEPHILLF 102


>gi|407915665|gb|EKG09213.1| Cyclin-dependent kinase regulatory subunit [Macrophomina phaseolina
           MS6]
          Length = 111

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/75 (50%), Positives = 48/75 (64%), Gaps = 9/75 (12%)

Query: 3   QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWV 53
            I YS +Y D  YEYRHV LP  + K++PK          +LL E EWRA+G+ QS GW 
Sbjct: 31  SIHYSARYSDSEYEYRHVQLPKQMLKVIPKEYFDGSRGTLKLLWEEEWRALGITQSLGWE 90

Query: 54  HYAIHRPEPHIMLFR 68
           HY +H PEPHI+LF+
Sbjct: 91  HYEVHEPEPHILLFK 105


>gi|380485717|emb|CCF39179.1| cyclin-dependent kinase regulatory subunit [Colletotrichum
           higginsianum]
          Length = 122

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/78 (50%), Positives = 49/78 (62%), Gaps = 9/78 (11%)

Query: 3   QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWV 53
            I YS +Y D  YEYRHV LP  + K +PK+         +LL E EWRA+G+ QS GW 
Sbjct: 29  SIHYSARYSDSEYEYRHVQLPKAMLKAIPKDYHDSSHGTLKLLWEEEWRALGITQSLGWE 88

Query: 54  HYAIHRPEPHIMLFRRPL 71
           HY +H PEPHI+LF+  L
Sbjct: 89  HYEVHEPEPHILLFKSVL 106


>gi|414880453|tpg|DAA57584.1| TPA: hypothetical protein ZEAMMB73_249837 [Zea mays]
          Length = 141

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/73 (57%), Positives = 43/73 (58%), Gaps = 27/73 (36%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDTYEYR                           VQQSRGWVHY IHRP
Sbjct: 1  MGQIQYSEKYFDDTYEYR---------------------------VQQSRGWVHYVIHRP 33

Query: 61 EPHIMLFRRPLNY 73
          E HIMLFRR +NY
Sbjct: 34 ELHIMLFRRRINY 46


>gi|46120526|ref|XP_385086.1| hypothetical protein FG04910.1 [Gibberella zeae PH-1]
          Length = 167

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 38/76 (50%), Positives = 48/76 (63%), Gaps = 9/76 (11%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y D  YEYRHV LP  + K +PK+         +LL E EWRA+G+ QS G
Sbjct: 29  IDSIHYSARYSDSEYEYRHVQLPKAMLKAIPKDYHDSSKGTLKLLWEEEWRALGITQSLG 88

Query: 52  WVHYAIHRPEPHIMLF 67
           W HY +H PEPHI+LF
Sbjct: 89  WEHYEVHEPEPHILLF 104


>gi|392573964|gb|EIW67102.1| hypothetical protein TREMEDRAFT_34217 [Tremella mesenterica DSM
          1558]
          Length = 102

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 10/72 (13%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN----------RLLSETEWRAIGVQQSRGW 52
          +I YS++Y DD +EYRHV+LP  + KL+P++          R+L E EWR IG+ QS GW
Sbjct: 16 RIIYSDRYSDDKFEYRHVILPKQMLKLIPRSYFTQDDSGLLRILEENEWRGIGITQSLGW 75

Query: 53 VHYAIHRPEPHI 64
           H+ +H PEPHI
Sbjct: 76 EHFEVHAPEPHI 87


>gi|118395076|ref|XP_001029893.1| Cyclin-dependent kinase regulatory subunit family protein
          [Tetrahymena thermophila]
 gi|89284170|gb|EAR82230.1| Cyclin-dependent kinase regulatory subunit family protein
          [Tetrahymena thermophila SB210]
          Length = 149

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 59/69 (85%), Gaps = 1/69 (1%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN-RLLSETEWRAIGVQQSRGWVHYAIHRPE 61
          +IQY EKY+DD YEYRHV+LP  + K +P++ ++L+E++WR +G+QQSRGWVHY  H+PE
Sbjct: 7  EIQYGEKYYDDYYEYRHVILPKQIFKTMPRDQKVLTESQWRMMGIQQSRGWVHYDSHKPE 66

Query: 62 PHIMLFRRP 70
          P+I+LFRRP
Sbjct: 67 PYILLFRRP 75


>gi|440466774|gb|ELQ36018.1| cyclin-dependent kinases regulatory subunit [Magnaporthe oryzae
           Y34]
 gi|440480258|gb|ELQ60932.1| cyclin-dependent kinases regulatory subunit [Magnaporthe oryzae
           P131]
          Length = 109

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 37/77 (48%), Positives = 47/77 (61%), Gaps = 9/77 (11%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y D  YEYRHV LP  + K +PK          +LL E EWR +G+ QS G
Sbjct: 33  LDSIHYSSRYNDSEYEYRHVQLPKAMLKAIPKEYHDSSKGTLKLLWEEEWRGMGITQSLG 92

Query: 52  WVHYAIHRPEPHIMLFR 68
           W HY +H PEPHI+LF+
Sbjct: 93  WEHYEVHEPEPHILLFK 109


>gi|58268800|ref|XP_571556.1| protein kinase activator [Cryptococcus neoformans var. neoformans
          JEC21]
 gi|57227791|gb|AAW44249.1| protein kinase activator, putative [Cryptococcus neoformans var.
          neoformans JEC21]
          Length = 94

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 47/72 (65%), Gaps = 10/72 (13%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN----------RLLSETEWRAIGVQQSRGW 52
          +I YS++Y DD +EYRHV+LP  + KL+PK           R+L E EWR IG+ QS GW
Sbjct: 16 RIIYSDRYSDDRFEYRHVILPKQMLKLIPKRYFASDDSGLLRILEEDEWRGIGITQSLGW 75

Query: 53 VHYAIHRPEPHI 64
           H+ +H PEPHI
Sbjct: 76 EHFEVHAPEPHI 87


>gi|195433428|ref|XP_002064714.1| GK15078 [Drosophila willistoni]
 gi|194160799|gb|EDW75700.1| GK15078 [Drosophila willistoni]
          Length = 59

 Score = 77.8 bits (190), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 33/48 (68%), Positives = 42/48 (87%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRG 51
          I YS+KYFD+ +EYRHVVLP ++ KL+PK  L++ETEWR+IGVQQSRG
Sbjct: 5  IYYSDKYFDEKFEYRHVVLPKELVKLVPKTHLMTETEWRSIGVQQSRG 52


>gi|321260080|ref|XP_003194760.1| protein kinase activator [Cryptococcus gattii WM276]
 gi|317461232|gb|ADV22973.1| Protein kinase activator, putative [Cryptococcus gattii WM276]
          Length = 89

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 10/72 (13%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN----------RLLSETEWRAIGVQQSRGW 52
          +I YS++Y DD +EYRHV+LP  + KL+P+           R+L E EWR IG+ QS GW
Sbjct: 16 RIIYSDRYSDDRFEYRHVILPKQMLKLIPQRYFASDDSGLLRILEEDEWRGIGITQSLGW 75

Query: 53 VHYAIHRPEPHI 64
           H+ +H PEPHI
Sbjct: 76 EHFEVHAPEPHI 87


>gi|291000130|ref|XP_002682632.1| CKS domain-containing protein [Naegleria gruberi]
 gi|284096260|gb|EFC49888.1| CKS domain-containing protein [Naegleria gruberi]
          Length = 104

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 3/73 (4%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPK---NRLLSETEWRAIGVQQSRGWVHYAIHR 59
          +  YS+KY+DD  EYRHV LP +    + K    +LL+E EWR IG++ SRGWVHY    
Sbjct: 8  EFNYSDKYYDDQNEYRHVTLPREFGNRVFKHFDGKLLAEEEWRGIGIEMSRGWVHYGYSP 67

Query: 60 PEPHIMLFRRPLN 72
           E HI+LF R  +
Sbjct: 68 SEHHILLFYRKFS 80


>gi|429964248|gb|ELA46246.1| hypothetical protein VCUG_02255 [Vavraia culicis 'floridensis']
          Length = 73

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 34/67 (50%), Positives = 48/67 (71%), Gaps = 1/67 (1%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          +I YS+ Y    Y YRHV++P    K LP+ +LL E+EWRA+G++ S GW HY IH+PE 
Sbjct: 5  KIFYSDPYETKDYVYRHVIIPKSTIKSLPE-KLLDESEWRALGLEMSVGWEHYMIHKPER 63

Query: 63 HIMLFRR 69
          H++LFR+
Sbjct: 64 HVLLFRK 70


>gi|303321630|ref|XP_003070809.1| cyclin-dependent kinases regulatory subunit, putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240110506|gb|EER28664.1| cyclin-dependent kinases regulatory subunit, putative [Coccidioides
           posadasii C735 delta SOWgp]
          Length = 103

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 9/77 (11%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           +  I YS +Y D  +EYRHV LP ++ K +P           +LL E EWR +G+ QS G
Sbjct: 27  IDSIHYSSRYSDSEFEYRHVQLPKNMLKKIPPEYFDQSKGTLKLLWEEEWRGLGITQSLG 86

Query: 52  WVHYAIHRPEPHIMLFR 68
           W HY +H PEPHI+LF+
Sbjct: 87  WEHYEVHEPEPHILLFK 103


>gi|440494362|gb|ELQ76747.1| Cyclin-dependent protein kinase CDC28, regulatory subunit CKS1
          [Trachipleistophora hominis]
          Length = 72

 Score = 75.1 bits (183), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 32/67 (47%), Positives = 50/67 (74%), Gaps = 1/67 (1%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEP 62
          ++ YS+ Y  + Y YRHV++P    + LP+ +LL+E+EWRA+G++ S GW HY IH+PE 
Sbjct: 5  KVFYSDPYETNDYIYRHVIIPKSTVQSLPE-KLLNESEWRALGLEMSVGWEHYMIHKPER 63

Query: 63 HIMLFRR 69
          H++LFR+
Sbjct: 64 HVLLFRK 70


>gi|145496286|ref|XP_001434134.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124401257|emb|CAK66737.1| unnamed protein product [Paramecium tetraurelia]
          Length = 97

 Score = 75.1 bits (183), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 33/67 (49%), Positives = 46/67 (68%)

Query: 5  QYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHI 64
          Q S+ Y DDT+ YR + L  +  KL+   +LL E EWR + VQQSRGW+HYAI   EP++
Sbjct: 26 QISQDYEDDTHVYRIIRLGKESVKLMQDYKLLKEKEWRKLKVQQSRGWLHYAIFEKEPYV 85

Query: 65 MLFRRPL 71
          +LF+R +
Sbjct: 86 LLFKRKI 92


>gi|391864260|gb|EIT73556.1| cyclin-dependent protein kinase CDC28, regulatory subunit CKS1
           [Aspergillus oryzae 3.042]
          Length = 131

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 17/85 (20%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSR- 50
           +  I YS +Y DD +EYRHV LP ++ K +P +         +LL E EWRA+G+ QS  
Sbjct: 34  IDSIHYSARYSDDQFEYRHVQLPKNMLKKIPADYFDSSKGTLKLLWEEEWRALGITQSSN 93

Query: 51  -------GWVHYAIHRPEPHIMLFR 68
                  GW HY +H PEPHI+LF+
Sbjct: 94  FTDGQSLGWEHYEVHEPEPHILLFK 118


>gi|83775374|dbj|BAE65494.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 124

 Score = 74.7 bits (182), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 17/85 (20%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSR- 50
           +  I YS +Y DD +EYRHV LP ++ K +P +         +LL E EWRA+G+ QS  
Sbjct: 27  IDSIHYSARYSDDQFEYRHVQLPKNMLKKIPADYFDSSKGTLKLLWEEEWRALGITQSSN 86

Query: 51  -------GWVHYAIHRPEPHIMLFR 68
                  GW HY +H PEPHI+LF+
Sbjct: 87  FTDGQSLGWEHYEVHEPEPHILLFK 111


>gi|443926856|gb|ELU45412.1| CKS domain-containing protein [Rhizoctonia solani AG-1 IA]
          Length = 101

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/67 (50%), Positives = 46/67 (68%), Gaps = 10/67 (14%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN----------RLLSETEWRAIGVQQSR 50
          + +I YS++Y DD+YEYRHV+LP  + KL+PK+          R+LSETEWR IG+ QS 
Sbjct: 11 VDRIHYSDRYSDDSYEYRHVILPKPLLKLIPKSYFEPDDSGVLRILSETEWRGIGITQSL 70

Query: 51 GWVHYAI 57
          GW HY +
Sbjct: 71 GWEHYEV 77


>gi|378733339|gb|EHY59798.1| cyclin-dependent kinase regulatory subunit [Exophiala dermatitidis
           NIH/UT8656]
          Length = 105

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 10/78 (12%)

Query: 1   MGQIQYS-EKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSR 50
           +  I YS  +Y D  YEYRHV LP  + K +P++         +LL E EWR +G+ QS 
Sbjct: 28  IDSIGYSASRYSDSEYEYRHVQLPKAMLKAIPRDYFDESKGTLKLLWEEEWRGLGITQSL 87

Query: 51  GWVHYAIHRPEPHIMLFR 68
           GW HY +H PEPHI+LF+
Sbjct: 88  GWEHYEVHEPEPHILLFK 105


>gi|383175738|gb|AFG71345.1| Pinus taeda anonymous locus 0_14828_01 genomic sequence
 gi|383175740|gb|AFG71346.1| Pinus taeda anonymous locus 0_14828_01 genomic sequence
 gi|383175742|gb|AFG71347.1| Pinus taeda anonymous locus 0_14828_01 genomic sequence
 gi|383175744|gb|AFG71348.1| Pinus taeda anonymous locus 0_14828_01 genomic sequence
 gi|383175746|gb|AFG71349.1| Pinus taeda anonymous locus 0_14828_01 genomic sequence
 gi|383175748|gb|AFG71350.1| Pinus taeda anonymous locus 0_14828_01 genomic sequence
 gi|383175750|gb|AFG71351.1| Pinus taeda anonymous locus 0_14828_01 genomic sequence
 gi|383175752|gb|AFG71352.1| Pinus taeda anonymous locus 0_14828_01 genomic sequence
 gi|383175754|gb|AFG71353.1| Pinus taeda anonymous locus 0_14828_01 genomic sequence
 gi|383175756|gb|AFG71354.1| Pinus taeda anonymous locus 0_14828_01 genomic sequence
 gi|383175758|gb|AFG71355.1| Pinus taeda anonymous locus 0_14828_01 genomic sequence
 gi|383175760|gb|AFG71356.1| Pinus taeda anonymous locus 0_14828_01 genomic sequence
 gi|383175762|gb|AFG71357.1| Pinus taeda anonymous locus 0_14828_01 genomic sequence
 gi|383175764|gb|AFG71358.1| Pinus taeda anonymous locus 0_14828_01 genomic sequence
          Length = 54

 Score = 72.4 bits (176), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/34 (94%), Positives = 32/34 (94%)

Query: 40 EWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNY 73
          EWR IGVQQSRGWVHYAIHRPEPHIMLFRR LNY
Sbjct: 1  EWRGIGVQQSRGWVHYAIHRPEPHIMLFRRHLNY 34


>gi|281350202|gb|EFB25786.1| hypothetical protein PANDA_011523 [Ailuropoda melanoleuca]
          Length = 43

 Score = 71.6 bits (174), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 30/43 (69%), Positives = 37/43 (86%)

Query: 18 RHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          RHV+LP D+AKL+PK  L+SE+EWR +GVQQS+GWVHY IH P
Sbjct: 1  RHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEP 43


>gi|326427105|gb|EGD72675.1| hypothetical protein PTSG_04406 [Salpingoeca sp. ATCC 50818]
          Length = 120

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 49/69 (71%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPH 63
          I Y E++ DD ++YR V+LP ++ + LP +R L+E E R +G++QS+GW H  I + +P+
Sbjct: 15 IVYVERHRDDQFQYRTVILPGEMGQGLPLHRALTEKECRRLGIRQSKGWTHCLIRKKDPN 74

Query: 64 IMLFRRPLN 72
           +LFRR L+
Sbjct: 75 SLLFRRKLD 83


>gi|443897865|dbj|GAC75204.1| cyclin-dependent protein kinase CDC28, regulatory subunit CKS1, and
           related proteins [Pseudozyma antarctica T-34]
          Length = 139

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 18/93 (19%)

Query: 2   GQIQYSEKYFDDTYEYRHVVLPPDVAKL--------LPKN----------RLLSETEWRA 43
           G+I YS+KY DD +EYR+V      A L        LP++          R+L+  EWR 
Sbjct: 22  GRIHYSDKYNDDEWEYRYVQPTLHSASLSRSRGDVLLPESYFDPAEPGVLRILAVKEWRD 81

Query: 44  IGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQ 76
           IG+ QS GW HY +H PEPHI+LFRR  ++ ++
Sbjct: 82  IGITQSVGWEHYEVHAPEPHILLFRREKDFLEK 114


>gi|365761970|gb|EHN03588.1| Cks1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
          VIN7]
          Length = 101

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 43/65 (66%), Gaps = 9/65 (13%)

Query: 21 VLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPL 71
          +LP  + K++P +         R+L+E EWR +G+ QS GW HY  H PEPHI+LF+RPL
Sbjct: 1  MLPKAMLKVIPSDYFNSEVGTLRILTEDEWRGLGITQSLGWEHYECHAPEPHILLFKRPL 60

Query: 72 NYQQQ 76
          NY+ +
Sbjct: 61 NYEAE 65


>gi|126654519|ref|XP_001388430.1| Cyclin dependent kinase regulatory subunit [Cryptosporidium
          parvum Iowa II]
 gi|126117370|gb|EAZ51470.1| Cyclin dependent kinase regulatory subunit, putative
          [Cryptosporidium parvum Iowa II]
          Length = 86

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/42 (71%), Positives = 34/42 (80%)

Query: 35 LLSETEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQ 76
          LLSE EWR +GVQQSRGW HY +H+PEPHI+LFRRPL    Q
Sbjct: 43 LLSEQEWRMLGVQQSRGWQHYLVHKPEPHILLFRRPLGTNPQ 84


>gi|307204796|gb|EFN83354.1| Cyclin-dependent kinases regulatory subunit 1 [Harpegnathos
          saltator]
          Length = 50

 Score = 68.9 bits (167), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 29/46 (63%), Positives = 37/46 (80%)

Query: 15 YEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          Y YRHV+LP D+A+ +PK  L++ETEWR +GVQQS GWVHY +H P
Sbjct: 2  YIYRHVILPQDIARHVPKTHLMTETEWRNLGVQQSPGWVHYMMHGP 47


>gi|440291895|gb|ELP85137.1| cyclin-dependent kinase regulatory subunit, putative [Entamoeba
          invadens IP1]
          Length = 81

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 6/73 (8%)

Query: 6  YSEKYFDDTYEYRHVVLPP-----DVAKLL-PKNRLLSETEWRAIGVQQSRGWVHYAIHR 59
          YS++  DD YEYR  +        D+ ++   K+RL++E EWR +GVQQS GW H+ I +
Sbjct: 7  YSDRLKDDVYEYREKLRMSTFHFCDLKQINNTKDRLMTEDEWRKLGVQQSVGWEHFDIFK 66

Query: 60 PEPHIMLFRRPLN 72
          PEP+++LFRR  N
Sbjct: 67 PEPNVLLFRRKRN 79


>gi|226489727|emb|CAX75014.1| Cyclin-dependent kinase subunit 30A [Schistosoma japonicum]
          Length = 59

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/44 (63%), Positives = 33/44 (75%)

Query: 36 LSETEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQEN 79
          +SE EWR +G+QQS GWVHY IH PEPHI+LFRRP    QQ  +
Sbjct: 1  MSEMEWRKLGIQQSAGWVHYMIHEPEPHIILFRRPRTDMQQSAS 44


>gi|308805975|ref|XP_003080299.1| cyclin-dependent kinases regulatory subunit (IC) [Ostreococcus
           tauri]
 gi|116058759|emb|CAL54466.1| cyclin-dependent kinases regulatory subunit (IC) [Ostreococcus
           tauri]
          Length = 167

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/32 (84%), Positives = 30/32 (93%)

Query: 37  SETEWRAIGVQQSRGWVHYAIHRPEPHIMLFR 68
           + TEWR +GVQQSRGWVHYAIHRPEPHIML+R
Sbjct: 90  ANTEWRGLGVQQSRGWVHYAIHRPEPHIMLYR 121


>gi|209878939|ref|XP_002140910.1| cyclin-dependent kinase regulatory subunit family protein
          [Cryptosporidium muris RN66]
 gi|209556516|gb|EEA06561.1| cyclin-dependent kinase regulatory subunit family protein
          [Cryptosporidium muris RN66]
          Length = 98

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 8/76 (10%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNR-------LLSETEWR-AIGVQQSRGWVH 54
          +++YSEK+  DT+EYR V L   + K L + R       L+SE EWR  +G+Q SRGWVH
Sbjct: 8  EVEYSEKFDMDTHEYRFVKLTRPLCKKLQQYRASRGNGALMSEEEWRHVLGLQMSRGWVH 67

Query: 55 YAIHRPEPHIMLFRRP 70
          +   + EP ++ FRRP
Sbjct: 68 FLDWKKEPWVLCFRRP 83


>gi|145511792|ref|XP_001441818.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409079|emb|CAK74421.1| unnamed protein product [Paramecium tetraurelia]
          Length = 93

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 55/84 (65%), Gaps = 5/84 (5%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNR---LLSETEWRAIGVQQSRGWVHYAIHRP 60
          I YS++Y DD Y Y  V L   +++ +P ++   LL E EWR +G++  +GW++Y +H P
Sbjct: 10 ISYSDQYRDDYYNYMIVYLDQKISEKIPIDKRGFLLREPEWRELGIKLFKGWLNYDVHYP 69

Query: 61 EPHIMLFRRPLN--YQQQQENQAQ 82
          +P+I+ FR+ ++   Q+++  QAQ
Sbjct: 70 DPYILFFRKRVDPRIQERKIQQAQ 93


>gi|148692903|gb|EDL24850.1| mCG6352 [Mus musculus]
          Length = 100

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/37 (67%), Positives = 31/37 (83%)

Query: 31 PKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHIMLF 67
          P+N   +E+EWR +GVQQS+GWVHY IH PEPHI+LF
Sbjct: 54 PENPFDAESEWRKLGVQQSQGWVHYMIHEPEPHILLF 90


>gi|145545011|ref|XP_001458190.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124426009|emb|CAK90793.1| unnamed protein product [Paramecium tetraurelia]
          Length = 87

 Score = 62.0 bits (149), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 35/43 (81%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIG 45
          +I+YS+KYFDD YEYRHV+LP  + K + K +LL+E EWRA+G
Sbjct: 7  EIEYSDKYFDDYYEYRHVILPKHIFKKITKGKLLNEMEWRALG 49


>gi|145478429|ref|XP_001425237.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124392306|emb|CAK57839.1| unnamed protein product [Paramecium tetraurelia]
          Length = 101

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 4/72 (5%)

Query: 5  QYSEKYFDDTYEYRHVVLPPDVAKLLPK----NRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          Q S+ + DDT+ YR + L  +  +L+ +     +LL E EWR + V Q RGW+HYAI   
Sbjct: 25 QISQDFEDDTHIYRIIRLGRESVRLMQEFKWEKKLLKEEEWRRLRVYQRRGWLHYAIFEK 84

Query: 61 EPHIMLFRRPLN 72
          EP+++LF+R + 
Sbjct: 85 EPYVLLFKRKIT 96


>gi|401412466|ref|XP_003885680.1| hypothetical protein NCLIV_060780 [Neospora caninum Liverpool]
 gi|325120100|emb|CBZ55654.1| hypothetical protein NCLIV_060780 [Neospora caninum Liverpool]
          Length = 615

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 11/79 (13%)

Query: 3   QIQYSEKYFDDTYEYRHVVLP---PDVAKLLP--------KNRLLSETEWRAIGVQQSRG 51
           QI YS+KY D  YEYR V LP   P +++ L         + R +SE  WR++GV+ S G
Sbjct: 460 QILYSDKYQDSAYEYRAVTLPLQHPFLSRALSPLADAIRRERRRMSEKLWRSLGVRMSCG 519

Query: 52  WVHYAIHRPEPHIMLFRRP 70
           W H+     EP+++ F RP
Sbjct: 520 WRHWGWSMYEPNVLFFARP 538


>gi|395535346|ref|XP_003769688.1| PREDICTED: LOW QUALITY PROTEIN: cyclin-dependent kinases
          regulatory subunit 2-like [Sarcophilus harrisii]
          Length = 77

 Score = 58.2 bits (139), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 45/77 (58%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRP 60
          M +I  S KYFD  YE  HV L   ++K + K  L+S+ + + + +Q +    H  IH P
Sbjct: 1  MYKIYQSVKYFDKHYENWHVTLLGKLSKQISKTHLISKEKXKTVVIQLNLXMCHDKIHEP 60

Query: 61 EPHIMLFRRPLNYQQQQ 77
          E HI+LFRR L  +QQ+
Sbjct: 61 ESHILLFRRLLLKEQQK 77


>gi|299473353|emb|CBN77752.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 76

 Score = 57.8 bits (138), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 25/43 (58%), Positives = 33/43 (76%)

Query: 30 LPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLN 72
          L  ++LLSE E  ++GV Q RGW HY+I RPEP+I+LFRRP+ 
Sbjct: 4  LSPSQLLSEAELESLGVFQDRGWEHYSILRPEPNILLFRRPMG 46


>gi|119484070|ref|XP_001261938.1| cyclin-dependent kinase regulatory subunit, putative [Neosartorya
          fischeri NRRL 181]
 gi|119410094|gb|EAW20041.1| cyclin-dependent kinase regulatory subunit, putative [Neosartorya
          fischeri NRRL 181]
          Length = 52

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/35 (62%), Positives = 28/35 (80%)

Query: 34 RLLSETEWRAIGVQQSRGWVHYAIHRPEPHIMLFR 68
          +LL E EWRA+G+ QS GW HY +H PEPHI+LF+
Sbjct: 18 KLLWEEEWRALGITQSLGWEHYEVHEPEPHILLFK 52


>gi|71034137|ref|XP_766710.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68353667|gb|EAN34427.1| hypothetical protein TP01_1189 [Theileria parva]
          Length = 135

 Score = 51.2 bits (121), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 5/73 (6%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPK-----NRLLSETEWRAIGVQQSRGWVHY 55
           +  IQYS K      + R V LP +   L+        RLLSE+EWR +G++ S+GW H 
Sbjct: 56  INNIQYSPKITHSNCQIRCVTLPREHPVLVGGLDGYGTRLLSESEWRKLGIKMSKGWTHS 115

Query: 56  AIHRPEPHIMLFR 68
                E HI++F+
Sbjct: 116 GYSPYESHILIFQ 128


>gi|322694457|gb|EFY86286.1| cyclin-dependent kinases regulatory subunit [Metarhizium acridum
          CQMa 102]
          Length = 235

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 35/64 (54%), Gaps = 9/64 (14%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
          +  I YS +Y D  YEYRHV LP  + K +PK+         +LL E EWRAIG+ Q   
Sbjct: 27 IDSIHYSARYSDSEYEYRHVQLPKAMLKAIPKDYHDTSKGTLKLLWEEEWRAIGITQEPI 86

Query: 52 WVHY 55
            HY
Sbjct: 87 IDHY 90


>gi|145506010|ref|XP_001438971.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124406144|emb|CAK71574.1| unnamed protein product [Paramecium tetraurelia]
          Length = 60

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 34/47 (72%), Gaps = 1/47 (2%)

Query: 3  QIQYSEKYFDDTYEYRHVVLPPDVAKLLPK-NRLLSETEWRAIGVQQ 48
           I YSEKY D  +EYRHV+LP ++ K + K  RLL+E EWR++G ++
Sbjct: 7  DIVYSEKYTDGEFEYRHVILPHELYKKISKIGRLLTEQEWRSLGYKR 53


>gi|399217185|emb|CCF73872.1| unnamed protein product [Babesia microti strain RI]
          Length = 176

 Score = 49.7 bits (117), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 7/78 (8%)

Query: 2   GQIQYSEKYFDDTYEYRHVVLPPDV-------AKLLPKNRLLSETEWRAIGVQQSRGWVH 54
           G++ YS +Y DD Y YR+V+L   V       +K+ P + L  E   R +G+  S GW H
Sbjct: 98  GEVYYSPRYQDDKYIYRYVLLSRRVKKEAYRLSKMQPSSLLTDEQIVRHLGIDLSPGWEH 157

Query: 55  YAIHRPEPHIMLFRRPLN 72
           + I+R +   ++ RRP N
Sbjct: 158 FMIYRNKLDELILRRPRN 175


>gi|401403499|ref|XP_003881489.1| hypothetical protein NCLIV_012540 [Neospora caninum Liverpool]
 gi|325115902|emb|CBZ51456.1| hypothetical protein NCLIV_012540 [Neospora caninum Liverpool]
          Length = 833

 Score = 48.5 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)

Query: 2   GQIQYSEKYFDDTYEYRHVVLPPDV-------AKLLPKNRLLSETEW-RAIGVQQSRGWV 53
           G++ YS +Y DD Y YRHV+L   V       A+L  K   LSE ++   +G+  S GW 
Sbjct: 430 GEVHYSPRYEDDRYVYRHVLLSSGVRKAAEEMAQLHSKTGFLSEEQFIYQLGIDLSPGWQ 489

Query: 54  HYAIHRPEPHIMLFRRPLNYQQQQENQA 81
           H+   +     ++ RRP   + ++ + A
Sbjct: 490 HFMRFKGRMRELILRRPPTAEDEKRDGA 517


>gi|428673476|gb|EKX74389.1| hypothetical protein BEWA_044320 [Babesia equi]
          Length = 97

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 6/74 (8%)

Query: 2  GQIQYSEKYFDDTYEYRHVVLPPDVAKLLPK------NRLLSETEWRAIGVQQSRGWVHY 55
            I+YS+K  D   E R V+LP +    L         R+  E EWR++G++ S GW H 
Sbjct: 21 NDIEYSDKVEDGKIEMRWVLLPRNHPLFLLDPLESNLKRIFREEEWRSLGIKMSLGWHHC 80

Query: 56 AIHRPEPHIMLFRR 69
               EP+I++F+R
Sbjct: 81 GFSPFEPNILIFQR 94


>gi|221501868|gb|EEE27621.1| conserved hypothetical protein [Toxoplasma gondii VEG]
          Length = 848

 Score = 46.6 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 8/88 (9%)

Query: 2   GQIQYSEKYFDDTYEYRHVVLPPDV-------AKLLPKNRLLSETEW-RAIGVQQSRGWV 53
           G++ YS +Y DD Y YRHV+L   V       AK   K   LSE ++   +G+  S GW 
Sbjct: 426 GEVHYSPRYEDDRYVYRHVLLSSGVRKAAEEMAKHHSKTGFLSEEQFIYQLGIDLSPGWQ 485

Query: 54  HYAIHRPEPHIMLFRRPLNYQQQQENQA 81
           H+   +     ++ RRP   + ++ + A
Sbjct: 486 HFMRFKGRLRELILRRPPTVEDEKRDGA 513


>gi|406606426|emb|CCH42200.1| Cyclin-dependent kinases regulatory subunit [Wickerhamomyces
          ciferrii]
          Length = 90

 Score = 46.6 bits (109), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 9/53 (16%)

Query: 15 YEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRGWVHYAIH 58
          Y   HV+LP  + K++P +         R+L+E EWR +G+ QS GW HY  H
Sbjct: 25 YSPSHVMLPKAMLKVIPSDYFNSETGTLRILTEDEWRGLGITQSLGWEHYETH 77


>gi|221481154|gb|EEE19559.1| conserved hypothetical protein [Toxoplasma gondii GT1]
          Length = 848

 Score = 46.6 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 8/88 (9%)

Query: 2   GQIQYSEKYFDDTYEYRHVVLPPDV-------AKLLPKNRLLSETEW-RAIGVQQSRGWV 53
           G++ YS +Y DD Y YRHV+L   V       AK   K   LSE ++   +G+  S GW 
Sbjct: 426 GEVHYSPRYEDDRYVYRHVLLSSGVRKAAEEMAKHHSKTGFLSEEQFIYQLGIDLSPGWQ 485

Query: 54  HYAIHRPEPHIMLFRRPLNYQQQQENQA 81
           H+   +     ++ RRP   + ++ + A
Sbjct: 486 HFMRFKGRLRELILRRPPTVEDEKRDGA 513


>gi|237844541|ref|XP_002371568.1| cyclin-dependent kinase, putative [Toxoplasma gondii ME49]
 gi|211969232|gb|EEB04428.1| cyclin-dependent kinase, putative [Toxoplasma gondii ME49]
          Length = 848

 Score = 46.2 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 8/88 (9%)

Query: 2   GQIQYSEKYFDDTYEYRHVVLPPDV-------AKLLPKNRLLSETEW-RAIGVQQSRGWV 53
           G++ YS +Y DD Y YRHV+L   V       AK   K   LSE ++   +G+  S GW 
Sbjct: 426 GEVHYSPRYEDDRYVYRHVLLSSGVRKAAEEMAKHHSKTGFLSEEQFIYQLGIDLSPGWQ 485

Query: 54  HYAIHRPEPHIMLFRRPLNYQQQQENQA 81
           H+   +     ++ RRP   + ++ + A
Sbjct: 486 HFMRFKGRLRELILRRPPTVEDEKRDGA 513


>gi|221485644|gb|EEE23925.1| conserved hypothetical protein [Toxoplasma gondii GT1]
          Length = 478

 Score = 45.4 bits (106), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 7/92 (7%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDV-------AKLLPKNRLLSETEWRAIGVQQSRGWV 53
            G + YS +Y D+ Y YRHV+L   V       A  +P   L  +     +G+  S GW 
Sbjct: 249 FGDVYYSPRYSDERYTYRHVILSRGVRKEAEKLASTMPDGLLTEDMFIHCLGIALSPGWT 308

Query: 54  HYAIHRPEPHIMLFRRPLNYQQQQENQAQQNI 85
           H+     +   ++ RRP      +  Q    +
Sbjct: 309 HFMCFNRKLKELILRRPREDDNPKATQGASKV 340


>gi|116182162|ref|XP_001220930.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
 gi|88186006|gb|EAQ93474.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
          Length = 113

 Score = 45.4 bits (106), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 9/54 (16%)

Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQ 48
          I YS +Y D  YEYRHV LP  + K +P +         +LL E EWR +G+ Q
Sbjct: 36 IHYSTRYSDSEYEYRHVQLPKAMLKAIPSDYHDKAKGTLKLLWEDEWRGMGITQ 89


>gi|428672081|gb|EKX72996.1| hypothetical protein BEWA_015570 [Babesia equi]
          Length = 105

 Score = 45.1 bits (105), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 7/73 (9%)

Query: 6   YSEKYFDDTYEYRHVVLPPDVAKL-------LPKNRLLSETEWRAIGVQQSRGWVHYAIH 58
           +S KY  D YEY+HV++  +  K+       L    +  E   + + ++Q+ GW HY I+
Sbjct: 30  HSGKYLGDKYEYKHVIMTREQYKMYRDEVHRLKGGFVSEEFILQTLNIRQTNGWEHYYIY 89

Query: 59  RPEPHIMLFRRPL 71
            P P+++  RR L
Sbjct: 90  PPNPNVLCLRRIL 102


>gi|237842753|ref|XP_002370674.1| cyclin-dependent kinase, putative [Toxoplasma gondii ME49]
 gi|211968338|gb|EEB03534.1| cyclin-dependent kinase, putative [Toxoplasma gondii ME49]
          Length = 320

 Score = 45.1 bits (105), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 7/92 (7%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDV-------AKLLPKNRLLSETEWRAIGVQQSRGWV 53
            G + YS +Y D+ Y YRHV+L   V       A  +P   L  +     +G+  S GW 
Sbjct: 90  FGDVYYSPRYSDERYTYRHVILSRGVRKEAEKLASTMPDGLLTEDMFIHCLGIALSPGWT 149

Query: 54  HYAIHRPEPHIMLFRRPLNYQQQQENQAQQNI 85
           H+     +   ++ RRP      +  Q    +
Sbjct: 150 HFMCFNRKLKELILRRPREDDNPKATQGASKV 181


>gi|294881882|ref|XP_002769521.1| hypothetical protein Pmar_PMAR003251 [Perkinsus marinus ATCC
          50983]
 gi|239873027|gb|EER02239.1| hypothetical protein Pmar_PMAR003251 [Perkinsus marinus ATCC
          50983]
          Length = 138

 Score = 42.7 bits (99), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 7/45 (15%)

Query: 5  QYSEKYFDDTYEYRHVVLPPDVAKLLPK-------NRLLSETEWR 42
          +YS+KY DDTYEYRHV+L     ++L +       + +L E EWR
Sbjct: 11 EYSDKYMDDTYEYRHVILNKPTYRMLQRSVRGYSASTILEENEWR 55


>gi|221502981|gb|EEE28691.1| hypothetical protein TGVEG_070740 [Toxoplasma gondii VEG]
          Length = 429

 Score = 42.4 bits (98), Expect = 0.037,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 7/91 (7%)

Query: 2   GQIQYSEKYFDDTYEYRHVVLPPDV-------AKLLPKNRLLSETEWRAIGVQQSRGWVH 54
           G + YS +Y D+ Y YRHV+L   V       A  +P   L  +     +G+  S GW H
Sbjct: 91  GDVYYSPRYSDERYTYRHVILSRGVRKEAEKLASTMPDGLLTEDMFIHCLGIALSPGWTH 150

Query: 55  YAIHRPEPHIMLFRRPLNYQQQQENQAQQNI 85
           +     +   ++ RRP      +  Q    +
Sbjct: 151 FMCFNRKLKELILRRPREDDNPKATQGASKV 181


>gi|302666351|ref|XP_003024776.1| hypothetical protein TRV_01058 [Trichophyton verrucosum HKI 0517]
 gi|291188846|gb|EFE44165.1| hypothetical protein TRV_01058 [Trichophyton verrucosum HKI 0517]
          Length = 116

 Score = 42.0 bits (97), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 9/55 (16%)

Query: 6   YSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSRG 51
           Y  +Y D+ YEYRHV LP  + K +P           +LL E EWR +G+ Q R 
Sbjct: 53  YMTRYSDNEYEYRHVQLPKPMLKKIPTEYFDHSKGTLKLLWEEEWRGLGITQVRA 107


>gi|401412584|ref|XP_003885739.1| hypothetical protein NCLIV_061380 [Neospora caninum Liverpool]
 gi|325120159|emb|CBZ55713.1| hypothetical protein NCLIV_061380 [Neospora caninum Liverpool]
          Length = 449

 Score = 42.0 bits (97), Expect = 0.053,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 7/76 (9%)

Query: 2   GQIQYSEKYFDDTYEYRHVVLPPDV-------AKLLPKNRLLSETEWRAIGVQQSRGWVH 54
           G + YS +Y D+ Y YRHV+L   V       A  +P   L  +     +G+  S GW H
Sbjct: 91  GDVYYSPRYSDERYTYRHVILSRGVRKEAEKLASTMPDGLLTEDMFIHCLGIALSPGWTH 150

Query: 55  YAIHRPEPHIMLFRRP 70
           +     +   ++ RRP
Sbjct: 151 FMCFNRKLKELILRRP 166


>gi|302506653|ref|XP_003015283.1| hypothetical protein ARB_06406 [Arthroderma benhamiae CBS 112371]
 gi|291178855|gb|EFE34643.1| hypothetical protein ARB_06406 [Arthroderma benhamiae CBS 112371]
          Length = 122

 Score = 40.8 bits (94), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 9/54 (16%)

Query: 6   YSEKYFDDTYEYRHVVLPPDVAKLLPKN---------RLLSETEWRAIGVQQSR 50
           Y  +Y D+ YEYRHV LP  + K +P           +LL E EWR +G+ Q R
Sbjct: 54  YMTRYSDNEYEYRHVQLPKPMLKKIPTEYFDHSKGTLKLLWEEEWRGLGITQVR 107


>gi|389583073|dbj|GAB65809.1| hypothetical protein PCYB_073110 [Plasmodium cynomolgi strain B]
          Length = 116

 Score = 40.4 bits (93), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 6/81 (7%)

Query: 2   GQIQYSEKYFDDTYEYRHVVLPPDV-----AKLLPKNRLLSE-TEWRAIGVQQSRGWVHY 55
           G + YS  Y DD Y YRH++L  +V     +K+   N  L+E      + +   +GW H+
Sbjct: 25  GPVCYSALYRDDKYVYRHIILSDNVRQYAESKVRKTNAFLTEHCIVNELQIDIGKGWKHF 84

Query: 56  AIHRPEPHIMLFRRPLNYQQQ 76
            I+  +   ++ R+ L  + +
Sbjct: 85  MIYDGKIRELILRKVLTAEDK 105


>gi|68076023|ref|XP_679931.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56500787|emb|CAH95196.1| conserved hypothetical protein [Plasmodium berghei]
          Length = 263

 Score = 40.0 bits (92), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 6/76 (7%)

Query: 2   GQIQYSEKYFDDTYEYRHVVLPPDV-----AKLLPKNRLLSE-TEWRAIGVQQSRGWVHY 55
           G + YS  Y DD Y YRH++L  +V      K+   N  L+E      + +   +GW H+
Sbjct: 172 GPVCYSSTYRDDKYIYRHIILSDNVRQYAEKKVRRTNAFLTEHCIINELQIDIGKGWKHF 231

Query: 56  AIHRPEPHIMLFRRPL 71
            I+  +   ++ R+ L
Sbjct: 232 MIYDGKIRELILRKVL 247


>gi|71026929|ref|XP_763108.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68350061|gb|EAN30825.1| hypothetical protein TP03_0089 [Theileria parva]
          Length = 327

 Score = 38.9 bits (89), Expect = 0.36,   Method: Composition-based stats.
 Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 7/77 (9%)

Query: 2   GQIQYSEKYFDDTYEYRHVVLPPDVA----KLLPKNR--LLSETE-WRAIGVQQSRGWVH 54
           G + YS ++ DD Y YR+V+L   V     +LL +++  LL+E +  R + +  S GW H
Sbjct: 251 GDVYYSPRFQDDKYIYRYVILTKGVRNEAYRLLKQSKSYLLTEHQIIRELCIDLSPGWEH 310

Query: 55  YAIHRPEPHIMLFRRPL 71
           + + +     ++ RR L
Sbjct: 311 FMLFKNRLDELILRRKL 327


>gi|71027281|ref|XP_763284.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68350237|gb|EAN31001.1| hypothetical protein TP03_0266 [Theileria parva]
          Length = 559

 Score = 38.9 bits (89), Expect = 0.37,   Method: Composition-based stats.
 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 19/89 (21%)

Query: 2   GQIQYSEKYFDDTYEYRHVVLPPD-------VAKLLPKN-----------RLLSETEW-R 42
           G I YS K+ DD Y YR +VL  +       ++K  PKN           RLL+  E   
Sbjct: 471 GHIIYSPKFQDDKYMYRFMVLTNEAQRQVEKLSKTSPKNGFNIGLSAGGKRLLTYHEIVH 530

Query: 43  AIGVQQSRGWVHYAIHRPEPHIMLFRRPL 71
            +G++ S GW H+   +     ++ R+PL
Sbjct: 531 TLGIKMSPGWHHFLYFKNTQKELILRKPL 559


>gi|85000473|ref|XP_954955.1| hypothetical protein [Theileria annulata]
 gi|65303101|emb|CAI75479.1| hypothetical protein TA03630 [Theileria annulata]
          Length = 559

 Score = 38.9 bits (89), Expect = 0.45,   Method: Composition-based stats.
 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 19/89 (21%)

Query: 2   GQIQYSEKYFDDTYEYRHVVLPPD-------VAKLLPKN-----------RLLSETEW-R 42
           G I YS K+ DD Y YR +VL  +       ++K  PKN           RLL+  E   
Sbjct: 471 GHIIYSPKFQDDKYMYRFMVLTSEAQRQVEKLSKTSPKNGFNVGLSAGGKRLLTYHEIVH 530

Query: 43  AIGVQQSRGWVHYAIHRPEPHIMLFRRPL 71
            +G++ S GW H+   +     ++ R+PL
Sbjct: 531 TLGIKMSPGWHHFLYFKNVQKELILRKPL 559


>gi|221054734|ref|XP_002258506.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
           knowlesi strain H]
 gi|193808575|emb|CAQ39278.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
           knowlesi strain H]
          Length = 242

 Score = 38.5 bits (88), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 6/81 (7%)

Query: 2   GQIQYSEKYFDDTYEYRHVVLPPDV-----AKLLPKNRLLSE-TEWRAIGVQQSRGWVHY 55
           G + YS  Y DD Y YRH++L  +V     +K+   N  L+E      + +   +GW H+
Sbjct: 151 GPVCYSALYRDDKYVYRHIILSDNVRQYAESKVRKTNAFLTEHCIVNELQIDIGKGWKHF 210

Query: 56  AIHRPEPHIMLFRRPLNYQQQ 76
            I+  +   ++ R+ L  + +
Sbjct: 211 MIYDGKIRELILRKVLTAEDK 231


>gi|403223381|dbj|BAM41512.1| uncharacterized protein TOT_030000774 [Theileria orientalis strain
           Shintoku]
          Length = 218

 Score = 38.1 bits (87), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 7/77 (9%)

Query: 2   GQIQYSEKYFDDTYEYRHVVLPPDVA----KLLPKNRLLSETE---WRAIGVQQSRGWVH 54
           G++ YS ++ DD Y YR+V+L   V     ++L +++    TE    R + +  S GW H
Sbjct: 142 GEVYYSPRFQDDKYIYRYVMLSKGVKEEAYRILKRSKTFLLTEHQILRELNIDLSLGWEH 201

Query: 55  YAIHRPEPHIMLFRRPL 71
           + +++     ++ RR L
Sbjct: 202 FMLYKNRLDELILRRRL 218


>gi|413935966|gb|AFW70517.1| hypothetical protein ZEAMMB73_217883 [Zea mays]
          Length = 325

 Score = 37.7 bits (86), Expect = 0.81,   Method: Composition-based stats.
 Identities = 17/24 (70%), Positives = 19/24 (79%), Gaps = 2/24 (8%)

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPP 24
          MGQI+YSEKYF+DTYEY     PP
Sbjct: 41 MGQIKYSEKYFNDTYEYS--TFPP 62


>gi|156082804|ref|XP_001608886.1| hypothetical protein [Babesia bovis T2Bo]
 gi|154796136|gb|EDO05318.1| hypothetical protein BBOV_I002360 [Babesia bovis]
          Length = 230

 Score = 37.7 bits (86), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 7/79 (8%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPPDVA----KLLPKNRLLSETEWRAI---GVQQSRGWV 53
            G + YS ++ D+ Y YR V+L   V     ++L        TE + I   G+  S GW 
Sbjct: 151 FGDVYYSPRFNDNKYTYRFVILTRGVRNEAYRILKSCGRHFLTEMQIIHQLGIDLSPGWE 210

Query: 54  HYAIHRPEPHIMLFRRPLN 72
           H+ + R +   ++ RRPL 
Sbjct: 211 HFMVFRNKLEELILRRPLG 229


>gi|85000165|ref|XP_954801.1| hypothetical protein [Theileria annulata strain Ankara]
 gi|65302947|emb|CAI75325.1| hypothetical protein, conserved [Theileria annulata]
          Length = 307

 Score = 37.4 bits (85), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 7/77 (9%)

Query: 2   GQIQYSEKYFDDTYEYRHVVLPPDVA----KLLPKNR--LLSETE-WRAIGVQQSRGWVH 54
           G + YS ++ D+ Y YR+V+L   V     +LL +++  LL+E +  R + +  S GW H
Sbjct: 231 GDVYYSPRFQDEKYIYRYVILTKGVRNEAYRLLKQSKSYLLTEHQIIRELCIDLSPGWEH 290

Query: 55  YAIHRPEPHIMLFRRPL 71
           + + +     ++ RR L
Sbjct: 291 FMLFKNRLDELILRRKL 307


>gi|428672057|gb|EKX72972.1| hypothetical protein BEWA_015310 [Babesia equi]
          Length = 401

 Score = 37.4 bits (85), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 22/92 (23%)

Query: 2   GQIQYSEKYFDDTYEYRHVVL--------------PPDVAKLLPKN-------RLLSETE 40
           G+I YS K  D+ Y YR V+L               P  +K L +N       RLL+E E
Sbjct: 309 GRIIYSPKLQDNKYLYRFVILTKEAQEAVEMLCKTSPRGSKNLNRNFSKSGGKRLLTEYE 368

Query: 41  W-RAIGVQQSRGWVHYAIHRPEPHIMLFRRPL 71
             + +G+Q S GW H+   +     ++ R+P+
Sbjct: 369 IIKNLGIQMSSGWEHFFYFKNMQKELVLRKPI 400


>gi|403223186|dbj|BAM41317.1| conserved hypothetical protein [Theileria orientalis strain
           Shintoku]
          Length = 821

 Score = 37.0 bits (84), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 16/71 (22%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPP---DVAKLLPK------------NRLLSETE-WRAI 44
            G+I YS K  DD Y YR +VL     +V ++L +             RLLSE++    +
Sbjct: 735 FGRILYSPKIQDDKYMYRFIVLSNEAQNVVEMLSRCSKTGAGGTYNYKRLLSESQIMHDL 794

Query: 45  GVQQSRGWVHY 55
           G++ S GW HY
Sbjct: 795 GIRMSGGWTHY 805


>gi|395237412|ref|ZP_10415486.1| proteasome accessory factor A [Turicella otitidis ATCC 51513]
 gi|423350701|ref|ZP_17328353.1| proteasome accessory factor PafA [Turicella otitidis ATCC 51513]
 gi|394487313|emb|CCI83574.1| proteasome accessory factor A [Turicella otitidis ATCC 51513]
 gi|404387302|gb|EJZ82423.1| proteasome accessory factor PafA [Turicella otitidis ATCC 51513]
          Length = 472

 Score = 37.0 bits (84), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 23  PPDVAKLLPKNRLLSETEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPL 71
           PP+  +   + R ++E E   +G   +  W H  ++RPEPH++    P 
Sbjct: 404 PPETTRAAARGRFVAEAE--RLGANAAVDWTHLKVNRPEPHVLDLLDPF 450


>gi|70935298|ref|XP_738753.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56515224|emb|CAH75382.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
          Length = 281

 Score = 36.6 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 6/81 (7%)

Query: 2   GQIQYSEKYFDDTYEYRHVVLPPDVAKLLPK-----NRLLSET-EWRAIGVQQSRGWVHY 55
           G + YS  Y DD Y YRH++L  +V +   K     N  L+E      + +   +GW H+
Sbjct: 190 GPVCYSSTYRDDKYIYRHIILSDNVRQYAEKTVRRTNAFLTEQCIINELQIDIGKGWKHF 249

Query: 56  AIHRPEPHIMLFRRPLNYQQQ 76
            I+  +   ++ R+ L  + +
Sbjct: 250 MIYDGKIRELILRKVLTAEDK 270


>gi|84997720|ref|XP_953581.1| cyclin-dependent kinase regulatory subunit [Theileria annulata]
 gi|65304578|emb|CAI72903.1| cyclin-dependent kinase regulatory subunit, putative [Theileria
          annulata]
          Length = 53

 Score = 36.6 bits (83), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 15/36 (41%), Positives = 22/36 (61%)

Query: 34 RLLSETEWRAIGVQQSRGWVHYAIHRPEPHIMLFRR 69
          RLL E EW+  G+Q S  W+H      E HI++F++
Sbjct: 16 RLLKEYEWKQFGIQISNEWIHIGYSPYELHILIFQK 51


>gi|156097468|ref|XP_001614767.1| hypothetical protein [Plasmodium vivax Sal-1]
 gi|148803641|gb|EDL45040.1| hypothetical protein, conserved [Plasmodium vivax]
          Length = 277

 Score = 36.6 bits (83), Expect = 2.0,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 6/81 (7%)

Query: 2   GQIQYSEKYFDDTYEYRHVVLPPDV-----AKLLPKNRLLSE-TEWRAIGVQQSRGWVHY 55
           G + YS  Y DD Y YRH++L  +V     +K+   N  L+E      + +   +GW H+
Sbjct: 186 GPVCYSALYRDDKYVYRHIILSDNVRQYAESKVRKTNAFLTEHCIVNELQIDIGKGWKHF 245

Query: 56  AIHRPEPHIMLFRRPLNYQQQ 76
            I+  +   ++ R+ L  + +
Sbjct: 246 MIYDGKIRELILRKVLTAEDK 266


>gi|399217852|emb|CCF74739.1| unnamed protein product [Babesia microti strain RI]
          Length = 516

 Score = 36.2 bits (82), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 29/100 (29%)

Query: 1   MGQIQYSEKYFDDTYEYRHVVLPP---DVAKLLPKN------------------------ 33
            G++ YS K+  D Y YR+++LP    D A+ L K                         
Sbjct: 417 FGKVFYSPKFQTDKYVYRYIILPKQSQDAAEALCKQRAILKNSGQNEINSPVIACEKSKF 476

Query: 34  -RLLSETE-WRAIGVQQSRGWVHYAIHRPEPHIMLFRRPL 71
            R L E E  R +G+  S GW H+ + +     ++ RR +
Sbjct: 477 VRFLDEPEILRQLGIHMSSGWQHFFVFKNSIKEIILRRKI 516


>gi|156086530|ref|XP_001610674.1| hypothetical protein [Babesia bovis T2Bo]
 gi|154797927|gb|EDO07106.1| hypothetical protein BBOV_IV007500 [Babesia bovis]
          Length = 477

 Score = 35.0 bits (79), Expect = 5.7,   Method: Composition-based stats.
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 22/92 (23%)

Query: 2   GQIQYSEKYFDDTYEYRHVVLPPD-------VAKLLPK--------------NRLLSETE 40
           G+I YS K+ DD Y YR V+L  +       +++ LP                R L+E E
Sbjct: 386 GKIIYSPKFKDDKYMYRFVLLTKEAQEAVEALSRTLPNASRHQGNYITSHGPKRYLTEFE 445

Query: 41  W-RAIGVQQSRGWVHYAIHRPEPHIMLFRRPL 71
             R +G+Q S GW H+   +     ++ R+ L
Sbjct: 446 IVRQLGIQMSPGWEHFMYFKELNKELVLRKRL 477


>gi|83286690|ref|XP_730271.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
 gi|23489948|gb|EAA21836.1| hypothetical protein [Plasmodium yoelii yoelii]
          Length = 308

 Score = 35.0 bits (79), Expect = 5.8,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 6/81 (7%)

Query: 2   GQIQYSEKYFDDTYEYRHVVLPPDVAKLLPK-----NRLLSE-TEWRAIGVQQSRGWVHY 55
           G + YS  Y DD Y YRH++L  +V +   K     N  L+E      + +   +GW H+
Sbjct: 217 GPVCYSSTYRDDKYIYRHIILSDNVRQYAEKKVRRTNAFLTEHCIINELQIDIGKGWKHF 276

Query: 56  AIHRPEPHIMLFRRPLNYQQQ 76
            I+  +   ++ R+ L  + +
Sbjct: 277 MIYDGKIRELILRKVLTAEDK 297


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.320    0.135    0.418 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,447,358,263
Number of Sequences: 23463169
Number of extensions: 50538930
Number of successful extensions: 132141
Number of sequences better than 100.0: 511
Number of HSP's better than 100.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 131460
Number of HSP's gapped (non-prelim): 515
length of query: 88
length of database: 8,064,228,071
effective HSP length: 58
effective length of query: 30
effective length of database: 6,703,364,269
effective search space: 201100928070
effective search space used: 201100928070
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)